Multiple sequence alignment - TraesCS3A01G440100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G440100 chr3A 100.000 4319 0 0 1 4319 683190502 683186184 0.000000e+00 7976
1 TraesCS3A01G440100 chr3A 81.698 530 87 7 2795 3319 682989408 682988884 2.390000e-117 433
2 TraesCS3A01G440100 chr3A 78.697 399 85 0 1735 2133 683253409 683253011 2.560000e-67 267
3 TraesCS3A01G440100 chr3A 77.444 399 84 5 1738 2133 682990244 682989849 2.600000e-57 233
4 TraesCS3A01G440100 chr3A 85.638 188 22 2 4118 4305 683065521 683065339 4.410000e-45 193
5 TraesCS3A01G440100 chr3A 92.188 128 10 0 4192 4319 683068349 683068222 9.540000e-42 182
6 TraesCS3A01G440100 chr3D 90.654 1958 108 32 2266 4182 546332179 546330256 0.000000e+00 2532
7 TraesCS3A01G440100 chr3D 87.381 1680 92 48 548 2183 546333780 546332177 0.000000e+00 1818
8 TraesCS3A01G440100 chr3D 81.107 524 89 7 2801 3319 546255718 546255200 1.120000e-110 411
9 TraesCS3A01G440100 chr3D 90.099 202 20 0 4118 4319 546294142 546293941 3.310000e-66 263
10 TraesCS3A01G440100 chr3D 78.195 399 87 0 1735 2133 546477256 546476858 5.540000e-64 255
11 TraesCS3A01G440100 chr3D 77.444 399 84 5 1738 2133 546256563 546256168 2.600000e-57 233
12 TraesCS3A01G440100 chr3D 93.878 98 3 2 2175 2272 414409680 414409774 1.250000e-30 145
13 TraesCS3A01G440100 chr3D 81.111 180 33 1 4140 4319 546317054 546316876 4.500000e-30 143
14 TraesCS3A01G440100 chr3D 96.203 79 3 0 4241 4319 546330229 546330151 3.510000e-26 130
15 TraesCS3A01G440100 chr3D 86.441 118 13 2 2153 2269 30979268 30979383 4.530000e-25 126
16 TraesCS3A01G440100 chr3D 87.692 65 6 2 976 1039 546391880 546391817 1.670000e-09 75
17 TraesCS3A01G440100 chr3B 89.083 2061 151 37 2313 4319 723444929 723442889 0.000000e+00 2492
18 TraesCS3A01G440100 chr3B 92.810 765 36 8 1430 2183 723445709 723444953 0.000000e+00 1090
19 TraesCS3A01G440100 chr3B 85.363 813 41 32 620 1403 723446469 723445706 0.000000e+00 771
20 TraesCS3A01G440100 chr3B 81.905 525 83 9 2801 3319 723150804 723150286 2.390000e-117 433
21 TraesCS3A01G440100 chr3B 78.947 399 84 0 1735 2133 723507517 723507119 5.500000e-69 272
22 TraesCS3A01G440100 chr3B 78.195 399 81 5 1738 2133 723151641 723151246 2.580000e-62 250
23 TraesCS3A01G440100 chr3B 92.126 127 9 1 4194 4319 723273078 723272952 1.230000e-40 178
24 TraesCS3A01G440100 chr3B 88.189 127 15 0 4193 4319 723266532 723266406 7.480000e-33 152
25 TraesCS3A01G440100 chr3B 95.745 94 2 1 2177 2270 243091295 243091204 2.690000e-32 150
26 TraesCS3A01G440100 chr6D 94.681 94 3 2 2177 2270 44423222 44423131 1.250000e-30 145
27 TraesCS3A01G440100 chr6D 80.606 165 22 7 1635 1793 436650910 436651070 7.590000e-23 119
28 TraesCS3A01G440100 chr1D 94.681 94 3 1 2174 2267 416852046 416852137 1.250000e-30 145
29 TraesCS3A01G440100 chr7A 93.814 97 2 4 2173 2268 129265872 129265779 4.500000e-30 143
30 TraesCS3A01G440100 chr7A 97.403 77 0 1 4245 4319 677938917 677938993 3.510000e-26 130
31 TraesCS3A01G440100 chr7A 82.517 143 19 3 1660 1799 316025750 316025889 2.110000e-23 121
32 TraesCS3A01G440100 chr2A 93.000 100 3 3 2169 2267 712843526 712843622 4.500000e-30 143
33 TraesCS3A01G440100 chr2A 92.157 102 4 3 2169 2269 133985111 133985013 1.620000e-29 141
34 TraesCS3A01G440100 chr7D 82.424 165 23 4 1638 1799 279737006 279736845 5.820000e-29 139
35 TraesCS3A01G440100 chr5A 92.000 100 6 1 2169 2268 547393317 547393414 5.820000e-29 139
36 TraesCS3A01G440100 chr5B 91.262 103 6 2 2167 2268 282503726 282503626 2.090000e-28 137
37 TraesCS3A01G440100 chr6B 98.667 75 0 1 4246 4319 473060810 473060884 9.750000e-27 132
38 TraesCS3A01G440100 chr1B 84.071 113 12 5 2159 2268 687408227 687408336 2.120000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G440100 chr3A 683186184 683190502 4318 True 7976.000000 7976 100.000000 1 4319 1 chr3A.!!$R1 4318
1 TraesCS3A01G440100 chr3A 682988884 682990244 1360 True 333.000000 433 79.571000 1738 3319 2 chr3A.!!$R3 1581
2 TraesCS3A01G440100 chr3D 546330151 546333780 3629 True 1493.333333 2532 91.412667 548 4319 3 chr3D.!!$R6 3771
3 TraesCS3A01G440100 chr3D 546255200 546256563 1363 True 322.000000 411 79.275500 1738 3319 2 chr3D.!!$R5 1581
4 TraesCS3A01G440100 chr3B 723442889 723446469 3580 True 1451.000000 2492 89.085333 620 4319 3 chr3B.!!$R6 3699
5 TraesCS3A01G440100 chr3B 723150286 723151641 1355 True 341.500000 433 80.050000 1738 3319 2 chr3B.!!$R5 1581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.030101 GTCGGCGAGATCTCAGGAAG 59.970 60.0 22.31 6.85 0.0 3.46 F
239 240 0.040067 GTGGCGACTTTCCTTTGCAG 60.040 55.0 0.00 0.00 0.0 4.41 F
404 405 0.167251 GTTGGTCCGGCATAAACGTG 59.833 55.0 0.00 0.00 0.0 4.49 F
1633 1685 0.030504 TTGTCTGTTGCGTTGCCATG 59.969 50.0 0.00 0.00 0.0 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1392 1434 0.107848 ATCACGTCCCGAATTGGTCC 60.108 55.0 0.00 0.0 35.15 4.46 R
1500 1545 0.177604 GTCAGACATGCTCTCCCTGG 59.822 60.0 0.00 0.0 0.00 4.45 R
2255 2317 0.113776 TTCAGTGGTACTCCCTCCGT 59.886 55.0 0.00 0.0 0.00 4.69 R
3394 3528 0.897621 GTAATGGCTTGGCTTGGCTT 59.102 50.0 5.64 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.520846 GCAACGGCGAATGAGCGG 62.521 66.667 16.62 0.00 42.21 5.52
34 35 2.813474 CAACGGCGAATGAGCGGA 60.813 61.111 16.62 0.00 40.14 5.54
35 36 2.509336 AACGGCGAATGAGCGGAG 60.509 61.111 16.62 0.00 40.14 4.63
36 37 3.001902 AACGGCGAATGAGCGGAGA 62.002 57.895 16.62 0.00 40.14 3.71
37 38 2.028190 CGGCGAATGAGCGGAGAT 59.972 61.111 0.00 0.00 39.42 2.75
38 39 1.285950 CGGCGAATGAGCGGAGATA 59.714 57.895 0.00 0.00 39.42 1.98
39 40 0.109086 CGGCGAATGAGCGGAGATAT 60.109 55.000 0.00 0.00 39.42 1.63
40 41 1.670087 CGGCGAATGAGCGGAGATATT 60.670 52.381 0.00 0.00 39.42 1.28
41 42 1.728971 GGCGAATGAGCGGAGATATTG 59.271 52.381 0.00 0.00 38.18 1.90
42 43 1.127582 GCGAATGAGCGGAGATATTGC 59.872 52.381 0.00 0.00 0.00 3.56
43 44 2.681706 CGAATGAGCGGAGATATTGCT 58.318 47.619 0.00 0.00 42.73 3.91
44 45 3.062763 CGAATGAGCGGAGATATTGCTT 58.937 45.455 0.00 0.00 39.49 3.91
45 46 3.122613 CGAATGAGCGGAGATATTGCTTC 59.877 47.826 0.00 0.00 39.49 3.86
46 47 4.314121 GAATGAGCGGAGATATTGCTTCT 58.686 43.478 0.00 0.00 39.49 2.85
47 48 3.377346 TGAGCGGAGATATTGCTTCTC 57.623 47.619 0.00 0.00 39.49 2.87
56 57 5.890334 GAGATATTGCTTCTCCTATCCTCG 58.110 45.833 0.00 0.00 34.75 4.63
57 58 4.709397 AGATATTGCTTCTCCTATCCTCGG 59.291 45.833 0.00 0.00 0.00 4.63
58 59 0.753262 TTGCTTCTCCTATCCTCGGC 59.247 55.000 0.00 0.00 0.00 5.54
59 60 1.287503 GCTTCTCCTATCCTCGGCG 59.712 63.158 0.00 0.00 0.00 6.46
60 61 1.457009 GCTTCTCCTATCCTCGGCGT 61.457 60.000 6.85 0.00 0.00 5.68
61 62 0.312416 CTTCTCCTATCCTCGGCGTG 59.688 60.000 6.85 3.87 0.00 5.34
62 63 0.395311 TTCTCCTATCCTCGGCGTGT 60.395 55.000 6.85 0.00 0.00 4.49
63 64 1.101635 TCTCCTATCCTCGGCGTGTG 61.102 60.000 6.85 0.00 0.00 3.82
64 65 2.279517 CCTATCCTCGGCGTGTGC 60.280 66.667 6.85 0.00 41.71 4.57
74 75 2.492090 GCGTGTGCCGAGAGAGAT 59.508 61.111 0.00 0.00 39.56 2.75
75 76 1.875813 GCGTGTGCCGAGAGAGATG 60.876 63.158 0.00 0.00 39.56 2.90
76 77 1.226802 CGTGTGCCGAGAGAGATGG 60.227 63.158 0.00 0.00 39.56 3.51
77 78 1.142748 GTGTGCCGAGAGAGATGGG 59.857 63.158 0.00 0.00 0.00 4.00
78 79 1.305297 TGTGCCGAGAGAGATGGGT 60.305 57.895 0.00 0.00 0.00 4.51
79 80 1.323271 TGTGCCGAGAGAGATGGGTC 61.323 60.000 0.00 0.00 0.00 4.46
80 81 2.121538 TGCCGAGAGAGATGGGTCG 61.122 63.158 0.00 0.00 0.00 4.79
81 82 3.437867 CCGAGAGAGATGGGTCGG 58.562 66.667 0.00 0.00 45.48 4.79
82 83 2.725008 CGAGAGAGATGGGTCGGC 59.275 66.667 0.00 0.00 0.00 5.54
83 84 2.725008 GAGAGAGATGGGTCGGCG 59.275 66.667 0.00 0.00 0.00 6.46
84 85 1.824329 GAGAGAGATGGGTCGGCGA 60.824 63.158 4.99 4.99 0.00 5.54
85 86 1.791103 GAGAGAGATGGGTCGGCGAG 61.791 65.000 11.20 0.00 0.00 5.03
86 87 1.824329 GAGAGATGGGTCGGCGAGA 60.824 63.158 11.20 0.00 0.00 4.04
87 88 1.152652 AGAGATGGGTCGGCGAGAT 60.153 57.895 11.20 2.20 0.00 2.75
88 89 1.175983 AGAGATGGGTCGGCGAGATC 61.176 60.000 11.20 12.42 0.00 2.75
89 90 1.152652 AGATGGGTCGGCGAGATCT 60.153 57.895 11.20 14.59 0.00 2.75
90 91 1.175983 AGATGGGTCGGCGAGATCTC 61.176 60.000 11.20 13.05 0.00 2.75
91 92 1.455773 ATGGGTCGGCGAGATCTCA 60.456 57.895 22.31 5.20 0.00 3.27
92 93 1.459455 ATGGGTCGGCGAGATCTCAG 61.459 60.000 22.31 15.23 0.00 3.35
93 94 2.725008 GGTCGGCGAGATCTCAGG 59.275 66.667 22.31 10.43 0.00 3.86
94 95 1.824329 GGTCGGCGAGATCTCAGGA 60.824 63.158 22.31 12.50 0.00 3.86
95 96 1.384989 GGTCGGCGAGATCTCAGGAA 61.385 60.000 22.31 2.37 0.00 3.36
96 97 0.030101 GTCGGCGAGATCTCAGGAAG 59.970 60.000 22.31 6.85 0.00 3.46
97 98 1.299773 CGGCGAGATCTCAGGAAGC 60.300 63.158 22.31 15.81 0.00 3.86
98 99 1.819229 GGCGAGATCTCAGGAAGCA 59.181 57.895 22.31 0.00 0.00 3.91
99 100 0.529555 GGCGAGATCTCAGGAAGCAC 60.530 60.000 22.31 7.64 0.00 4.40
100 101 0.459489 GCGAGATCTCAGGAAGCACT 59.541 55.000 22.31 0.00 0.00 4.40
101 102 1.802136 GCGAGATCTCAGGAAGCACTG 60.802 57.143 22.31 3.31 39.84 3.66
102 103 1.202394 CGAGATCTCAGGAAGCACTGG 60.202 57.143 22.31 0.00 38.98 4.00
103 104 1.830477 GAGATCTCAGGAAGCACTGGT 59.170 52.381 18.11 0.00 38.98 4.00
104 105 2.235898 GAGATCTCAGGAAGCACTGGTT 59.764 50.000 18.11 0.00 38.98 3.67
105 106 2.641815 AGATCTCAGGAAGCACTGGTTT 59.358 45.455 0.00 0.00 38.98 3.27
106 107 2.260844 TCTCAGGAAGCACTGGTTTG 57.739 50.000 0.00 0.00 38.98 2.93
107 108 1.768275 TCTCAGGAAGCACTGGTTTGA 59.232 47.619 0.00 0.00 38.98 2.69
108 109 2.149578 CTCAGGAAGCACTGGTTTGAG 58.850 52.381 7.82 7.82 38.98 3.02
109 110 1.768275 TCAGGAAGCACTGGTTTGAGA 59.232 47.619 0.00 0.00 38.98 3.27
110 111 2.172505 TCAGGAAGCACTGGTTTGAGAA 59.827 45.455 0.00 0.00 38.98 2.87
111 112 2.291741 CAGGAAGCACTGGTTTGAGAAC 59.708 50.000 0.00 0.00 34.84 3.01
112 113 2.092429 AGGAAGCACTGGTTTGAGAACA 60.092 45.455 0.00 0.00 37.51 3.18
113 114 2.687935 GGAAGCACTGGTTTGAGAACAA 59.312 45.455 0.00 0.00 37.51 2.83
114 115 3.130340 GGAAGCACTGGTTTGAGAACAAA 59.870 43.478 0.00 0.00 42.66 2.83
115 116 4.381505 GGAAGCACTGGTTTGAGAACAAAA 60.382 41.667 0.00 0.00 45.65 2.44
116 117 5.343307 AAGCACTGGTTTGAGAACAAAAT 57.657 34.783 0.00 0.00 45.65 1.82
117 118 6.460953 GGAAGCACTGGTTTGAGAACAAAATA 60.461 38.462 0.00 0.00 45.65 1.40
118 119 6.655078 AGCACTGGTTTGAGAACAAAATAT 57.345 33.333 0.00 0.00 45.65 1.28
119 120 6.449698 AGCACTGGTTTGAGAACAAAATATG 58.550 36.000 0.00 0.00 45.65 1.78
120 121 6.265196 AGCACTGGTTTGAGAACAAAATATGA 59.735 34.615 0.00 0.00 45.65 2.15
121 122 6.363357 GCACTGGTTTGAGAACAAAATATGAC 59.637 38.462 0.00 0.00 45.65 3.06
122 123 7.651808 CACTGGTTTGAGAACAAAATATGACT 58.348 34.615 0.00 0.00 45.65 3.41
123 124 8.137437 CACTGGTTTGAGAACAAAATATGACTT 58.863 33.333 0.00 0.00 45.65 3.01
124 125 9.349713 ACTGGTTTGAGAACAAAATATGACTTA 57.650 29.630 0.00 0.00 45.65 2.24
137 138 9.608617 CAAAATATGACTTATGATGATGTCAGC 57.391 33.333 0.00 0.00 41.77 4.26
138 139 7.918536 AATATGACTTATGATGATGTCAGCC 57.081 36.000 0.00 0.00 41.77 4.85
139 140 3.721035 TGACTTATGATGATGTCAGCCG 58.279 45.455 0.00 0.00 40.92 5.52
140 141 2.478134 GACTTATGATGATGTCAGCCGC 59.522 50.000 0.00 0.00 40.92 6.53
141 142 1.458445 CTTATGATGATGTCAGCCGCG 59.542 52.381 0.00 0.00 40.92 6.46
142 143 0.319813 TATGATGATGTCAGCCGCGG 60.320 55.000 24.05 24.05 40.92 6.46
143 144 3.643978 GATGATGTCAGCCGCGGC 61.644 66.667 42.34 42.34 42.33 6.53
157 158 3.032609 CGGCGGCATCGATGACTC 61.033 66.667 29.20 21.33 39.00 3.36
158 159 3.032609 GGCGGCATCGATGACTCG 61.033 66.667 29.20 25.26 46.41 4.18
159 160 2.278857 GCGGCATCGATGACTCGT 60.279 61.111 29.20 0.00 45.25 4.18
160 161 1.878522 GCGGCATCGATGACTCGTT 60.879 57.895 29.20 0.00 45.25 3.85
161 162 1.920051 CGGCATCGATGACTCGTTG 59.080 57.895 29.20 9.19 45.25 4.10
162 163 1.482621 CGGCATCGATGACTCGTTGG 61.483 60.000 29.20 8.41 45.25 3.77
163 164 0.460284 GGCATCGATGACTCGTTGGT 60.460 55.000 29.20 0.00 45.25 3.67
164 165 0.647410 GCATCGATGACTCGTTGGTG 59.353 55.000 29.20 0.00 45.25 4.17
165 166 1.996292 CATCGATGACTCGTTGGTGT 58.004 50.000 21.02 0.00 45.25 4.16
166 167 2.734175 GCATCGATGACTCGTTGGTGTA 60.734 50.000 29.20 0.00 45.25 2.90
167 168 2.913777 TCGATGACTCGTTGGTGTAG 57.086 50.000 0.00 0.00 45.25 2.74
168 169 2.429478 TCGATGACTCGTTGGTGTAGA 58.571 47.619 0.00 0.00 45.25 2.59
169 170 3.014623 TCGATGACTCGTTGGTGTAGAT 58.985 45.455 0.00 0.00 45.25 1.98
170 171 3.442625 TCGATGACTCGTTGGTGTAGATT 59.557 43.478 0.00 0.00 45.25 2.40
171 172 3.791887 CGATGACTCGTTGGTGTAGATTC 59.208 47.826 0.00 0.00 40.07 2.52
172 173 4.674362 CGATGACTCGTTGGTGTAGATTCA 60.674 45.833 0.00 0.00 40.07 2.57
173 174 3.909430 TGACTCGTTGGTGTAGATTCAC 58.091 45.455 0.00 0.00 37.57 3.18
174 175 2.915463 GACTCGTTGGTGTAGATTCACG 59.085 50.000 0.00 0.00 39.00 4.35
175 176 1.654105 CTCGTTGGTGTAGATTCACGC 59.346 52.381 0.00 0.00 39.00 5.34
176 177 1.271379 TCGTTGGTGTAGATTCACGCT 59.729 47.619 0.00 0.00 39.00 5.07
177 178 1.390123 CGTTGGTGTAGATTCACGCTG 59.610 52.381 0.00 0.00 39.00 5.18
178 179 2.683968 GTTGGTGTAGATTCACGCTGA 58.316 47.619 0.00 0.00 39.00 4.26
179 180 2.363788 TGGTGTAGATTCACGCTGAC 57.636 50.000 0.00 0.00 39.00 3.51
180 181 1.067142 TGGTGTAGATTCACGCTGACC 60.067 52.381 0.00 0.00 39.00 4.02
181 182 1.204941 GGTGTAGATTCACGCTGACCT 59.795 52.381 0.00 0.00 39.00 3.85
182 183 2.531206 GTGTAGATTCACGCTGACCTC 58.469 52.381 0.00 0.00 0.00 3.85
183 184 2.164624 GTGTAGATTCACGCTGACCTCT 59.835 50.000 0.00 0.00 0.00 3.69
184 185 2.826128 TGTAGATTCACGCTGACCTCTT 59.174 45.455 0.00 0.00 0.00 2.85
185 186 2.376808 AGATTCACGCTGACCTCTTG 57.623 50.000 0.00 0.00 0.00 3.02
186 187 1.895798 AGATTCACGCTGACCTCTTGA 59.104 47.619 0.00 0.00 0.00 3.02
187 188 1.996191 GATTCACGCTGACCTCTTGAC 59.004 52.381 0.00 0.00 0.00 3.18
188 189 0.318699 TTCACGCTGACCTCTTGACG 60.319 55.000 0.00 0.00 0.00 4.35
189 190 1.170290 TCACGCTGACCTCTTGACGA 61.170 55.000 0.00 0.00 0.00 4.20
190 191 0.109086 CACGCTGACCTCTTGACGAT 60.109 55.000 0.00 0.00 0.00 3.73
191 192 1.132453 CACGCTGACCTCTTGACGATA 59.868 52.381 0.00 0.00 0.00 2.92
192 193 1.132643 ACGCTGACCTCTTGACGATAC 59.867 52.381 0.00 0.00 0.00 2.24
193 194 1.132453 CGCTGACCTCTTGACGATACA 59.868 52.381 0.00 0.00 0.00 2.29
194 195 2.792890 CGCTGACCTCTTGACGATACAG 60.793 54.545 0.00 0.00 0.00 2.74
195 196 2.164624 GCTGACCTCTTGACGATACAGT 59.835 50.000 0.00 0.00 0.00 3.55
196 197 3.367498 GCTGACCTCTTGACGATACAGTT 60.367 47.826 0.00 0.00 0.00 3.16
197 198 4.142447 GCTGACCTCTTGACGATACAGTTA 60.142 45.833 0.00 0.00 0.00 2.24
198 199 5.562506 TGACCTCTTGACGATACAGTTAG 57.437 43.478 0.00 0.00 0.00 2.34
199 200 4.398358 TGACCTCTTGACGATACAGTTAGG 59.602 45.833 0.00 0.00 0.00 2.69
200 201 3.700038 ACCTCTTGACGATACAGTTAGGG 59.300 47.826 0.00 0.00 0.00 3.53
201 202 3.700038 CCTCTTGACGATACAGTTAGGGT 59.300 47.826 0.00 0.00 0.00 4.34
202 203 4.159879 CCTCTTGACGATACAGTTAGGGTT 59.840 45.833 0.00 0.00 0.00 4.11
203 204 5.337330 CCTCTTGACGATACAGTTAGGGTTT 60.337 44.000 0.00 0.00 0.00 3.27
204 205 6.105397 TCTTGACGATACAGTTAGGGTTTT 57.895 37.500 0.00 0.00 0.00 2.43
205 206 5.929992 TCTTGACGATACAGTTAGGGTTTTG 59.070 40.000 0.00 0.00 0.00 2.44
206 207 5.217978 TGACGATACAGTTAGGGTTTTGT 57.782 39.130 0.00 0.00 0.00 2.83
207 208 5.613329 TGACGATACAGTTAGGGTTTTGTT 58.387 37.500 0.00 0.00 0.00 2.83
208 209 6.757237 TGACGATACAGTTAGGGTTTTGTTA 58.243 36.000 0.00 0.00 0.00 2.41
209 210 6.869913 TGACGATACAGTTAGGGTTTTGTTAG 59.130 38.462 0.00 0.00 0.00 2.34
210 211 6.762333 ACGATACAGTTAGGGTTTTGTTAGT 58.238 36.000 0.00 0.00 0.00 2.24
211 212 7.895759 ACGATACAGTTAGGGTTTTGTTAGTA 58.104 34.615 0.00 0.00 0.00 1.82
212 213 8.534496 ACGATACAGTTAGGGTTTTGTTAGTAT 58.466 33.333 0.00 0.00 0.00 2.12
213 214 8.814235 CGATACAGTTAGGGTTTTGTTAGTATG 58.186 37.037 0.00 0.00 0.00 2.39
214 215 9.106070 GATACAGTTAGGGTTTTGTTAGTATGG 57.894 37.037 0.00 0.00 0.00 2.74
215 216 6.844829 ACAGTTAGGGTTTTGTTAGTATGGT 58.155 36.000 0.00 0.00 0.00 3.55
216 217 6.713450 ACAGTTAGGGTTTTGTTAGTATGGTG 59.287 38.462 0.00 0.00 0.00 4.17
217 218 6.938030 CAGTTAGGGTTTTGTTAGTATGGTGA 59.062 38.462 0.00 0.00 0.00 4.02
218 219 7.610305 CAGTTAGGGTTTTGTTAGTATGGTGAT 59.390 37.037 0.00 0.00 0.00 3.06
219 220 8.828751 AGTTAGGGTTTTGTTAGTATGGTGATA 58.171 33.333 0.00 0.00 0.00 2.15
220 221 9.106070 GTTAGGGTTTTGTTAGTATGGTGATAG 57.894 37.037 0.00 0.00 0.00 2.08
221 222 7.266905 AGGGTTTTGTTAGTATGGTGATAGT 57.733 36.000 0.00 0.00 0.00 2.12
222 223 7.110155 AGGGTTTTGTTAGTATGGTGATAGTG 58.890 38.462 0.00 0.00 0.00 2.74
223 224 6.317893 GGGTTTTGTTAGTATGGTGATAGTGG 59.682 42.308 0.00 0.00 0.00 4.00
224 225 6.183360 GGTTTTGTTAGTATGGTGATAGTGGC 60.183 42.308 0.00 0.00 0.00 5.01
225 226 4.316205 TGTTAGTATGGTGATAGTGGCG 57.684 45.455 0.00 0.00 0.00 5.69
226 227 3.955551 TGTTAGTATGGTGATAGTGGCGA 59.044 43.478 0.00 0.00 0.00 5.54
227 228 4.202080 TGTTAGTATGGTGATAGTGGCGAC 60.202 45.833 0.00 0.00 0.00 5.19
228 229 2.667470 AGTATGGTGATAGTGGCGACT 58.333 47.619 6.61 6.61 36.07 4.18
229 230 3.031736 AGTATGGTGATAGTGGCGACTT 58.968 45.455 6.71 0.00 33.21 3.01
230 231 3.451178 AGTATGGTGATAGTGGCGACTTT 59.549 43.478 6.71 0.00 33.21 2.66
231 232 2.380084 TGGTGATAGTGGCGACTTTC 57.620 50.000 6.71 9.56 33.21 2.62
232 233 1.066430 TGGTGATAGTGGCGACTTTCC 60.066 52.381 6.71 5.65 31.11 3.13
233 234 1.207329 GGTGATAGTGGCGACTTTCCT 59.793 52.381 6.71 0.00 31.11 3.36
234 235 2.354805 GGTGATAGTGGCGACTTTCCTT 60.355 50.000 6.71 0.00 31.11 3.36
235 236 3.335579 GTGATAGTGGCGACTTTCCTTT 58.664 45.455 6.71 0.00 31.11 3.11
236 237 3.125316 GTGATAGTGGCGACTTTCCTTTG 59.875 47.826 6.71 0.00 31.11 2.77
237 238 1.519408 TAGTGGCGACTTTCCTTTGC 58.481 50.000 6.71 0.00 33.21 3.68
238 239 0.465460 AGTGGCGACTTTCCTTTGCA 60.465 50.000 0.00 0.00 0.00 4.08
239 240 0.040067 GTGGCGACTTTCCTTTGCAG 60.040 55.000 0.00 0.00 0.00 4.41
240 241 0.465460 TGGCGACTTTCCTTTGCAGT 60.465 50.000 0.00 0.00 0.00 4.40
241 242 1.202710 TGGCGACTTTCCTTTGCAGTA 60.203 47.619 0.00 0.00 0.00 2.74
242 243 2.084546 GGCGACTTTCCTTTGCAGTAT 58.915 47.619 0.00 0.00 0.00 2.12
243 244 2.096013 GGCGACTTTCCTTTGCAGTATC 59.904 50.000 0.00 0.00 0.00 2.24
244 245 2.096013 GCGACTTTCCTTTGCAGTATCC 59.904 50.000 0.00 0.00 0.00 2.59
245 246 2.678336 CGACTTTCCTTTGCAGTATCCC 59.322 50.000 0.00 0.00 0.00 3.85
246 247 3.686016 GACTTTCCTTTGCAGTATCCCA 58.314 45.455 0.00 0.00 0.00 4.37
247 248 3.421844 ACTTTCCTTTGCAGTATCCCAC 58.578 45.455 0.00 0.00 0.00 4.61
248 249 3.074538 ACTTTCCTTTGCAGTATCCCACT 59.925 43.478 0.00 0.00 38.32 4.00
249 250 3.806949 TTCCTTTGCAGTATCCCACTT 57.193 42.857 0.00 0.00 34.26 3.16
250 251 3.350219 TCCTTTGCAGTATCCCACTTC 57.650 47.619 0.00 0.00 34.26 3.01
251 252 2.009774 CCTTTGCAGTATCCCACTTCG 58.990 52.381 0.00 0.00 34.26 3.79
252 253 2.615493 CCTTTGCAGTATCCCACTTCGT 60.615 50.000 0.00 0.00 34.26 3.85
253 254 2.851263 TTGCAGTATCCCACTTCGTT 57.149 45.000 0.00 0.00 34.26 3.85
254 255 3.965379 TTGCAGTATCCCACTTCGTTA 57.035 42.857 0.00 0.00 34.26 3.18
255 256 3.241067 TGCAGTATCCCACTTCGTTAC 57.759 47.619 0.00 0.00 34.26 2.50
256 257 2.563620 TGCAGTATCCCACTTCGTTACA 59.436 45.455 0.00 0.00 34.26 2.41
257 258 3.196901 TGCAGTATCCCACTTCGTTACAT 59.803 43.478 0.00 0.00 34.26 2.29
258 259 4.189231 GCAGTATCCCACTTCGTTACATT 58.811 43.478 0.00 0.00 34.26 2.71
259 260 4.034048 GCAGTATCCCACTTCGTTACATTG 59.966 45.833 0.00 0.00 34.26 2.82
260 261 4.570772 CAGTATCCCACTTCGTTACATTGG 59.429 45.833 0.00 0.00 34.26 3.16
261 262 3.713826 ATCCCACTTCGTTACATTGGT 57.286 42.857 0.00 0.00 0.00 3.67
262 263 2.773487 TCCCACTTCGTTACATTGGTG 58.227 47.619 0.00 0.00 0.00 4.17
263 264 2.105134 TCCCACTTCGTTACATTGGTGT 59.895 45.455 0.00 0.00 42.39 4.16
264 265 2.482721 CCCACTTCGTTACATTGGTGTC 59.517 50.000 0.00 0.00 39.77 3.67
265 266 3.135225 CCACTTCGTTACATTGGTGTCA 58.865 45.455 0.00 0.00 39.77 3.58
266 267 3.059188 CCACTTCGTTACATTGGTGTCAC 60.059 47.826 0.00 0.00 39.77 3.67
267 268 3.059188 CACTTCGTTACATTGGTGTCACC 60.059 47.826 15.64 15.64 39.77 4.02
268 269 3.181458 ACTTCGTTACATTGGTGTCACCT 60.181 43.478 22.56 5.16 39.58 4.00
269 270 3.478857 TCGTTACATTGGTGTCACCTT 57.521 42.857 22.56 7.82 39.58 3.50
270 271 3.395639 TCGTTACATTGGTGTCACCTTC 58.604 45.455 22.56 0.00 39.58 3.46
271 272 3.135225 CGTTACATTGGTGTCACCTTCA 58.865 45.455 22.56 7.50 39.58 3.02
272 273 3.186409 CGTTACATTGGTGTCACCTTCAG 59.814 47.826 22.56 12.08 39.58 3.02
273 274 1.609208 ACATTGGTGTCACCTTCAGC 58.391 50.000 22.56 0.00 39.58 4.26
274 275 0.518636 CATTGGTGTCACCTTCAGCG 59.481 55.000 22.56 2.32 39.58 5.18
275 276 0.606401 ATTGGTGTCACCTTCAGCGG 60.606 55.000 22.56 0.00 39.58 5.52
276 277 1.691195 TTGGTGTCACCTTCAGCGGA 61.691 55.000 22.56 0.00 39.58 5.54
277 278 1.374758 GGTGTCACCTTCAGCGGAG 60.375 63.158 15.22 0.00 34.73 4.63
296 297 6.351327 CGGAGCTTCTTTTAGAGGTTATTG 57.649 41.667 0.00 0.00 0.00 1.90
297 298 5.294552 CGGAGCTTCTTTTAGAGGTTATTGG 59.705 44.000 0.00 0.00 0.00 3.16
298 299 5.590663 GGAGCTTCTTTTAGAGGTTATTGGG 59.409 44.000 0.00 0.00 0.00 4.12
299 300 6.388619 AGCTTCTTTTAGAGGTTATTGGGA 57.611 37.500 0.00 0.00 0.00 4.37
300 301 6.974795 AGCTTCTTTTAGAGGTTATTGGGAT 58.025 36.000 0.00 0.00 0.00 3.85
301 302 8.102484 AGCTTCTTTTAGAGGTTATTGGGATA 57.898 34.615 0.00 0.00 0.00 2.59
302 303 8.728098 AGCTTCTTTTAGAGGTTATTGGGATAT 58.272 33.333 0.00 0.00 0.00 1.63
303 304 9.355916 GCTTCTTTTAGAGGTTATTGGGATATT 57.644 33.333 0.00 0.00 0.00 1.28
305 306 9.640952 TTCTTTTAGAGGTTATTGGGATATTGG 57.359 33.333 0.00 0.00 0.00 3.16
306 307 9.009675 TCTTTTAGAGGTTATTGGGATATTGGA 57.990 33.333 0.00 0.00 0.00 3.53
307 308 9.813826 CTTTTAGAGGTTATTGGGATATTGGAT 57.186 33.333 0.00 0.00 0.00 3.41
308 309 9.586732 TTTTAGAGGTTATTGGGATATTGGATG 57.413 33.333 0.00 0.00 0.00 3.51
309 310 6.786843 AGAGGTTATTGGGATATTGGATGT 57.213 37.500 0.00 0.00 0.00 3.06
310 311 7.888514 AGAGGTTATTGGGATATTGGATGTA 57.111 36.000 0.00 0.00 0.00 2.29
311 312 8.468547 AGAGGTTATTGGGATATTGGATGTAT 57.531 34.615 0.00 0.00 0.00 2.29
312 313 8.331740 AGAGGTTATTGGGATATTGGATGTATG 58.668 37.037 0.00 0.00 0.00 2.39
313 314 8.230848 AGGTTATTGGGATATTGGATGTATGA 57.769 34.615 0.00 0.00 0.00 2.15
314 315 8.677871 AGGTTATTGGGATATTGGATGTATGAA 58.322 33.333 0.00 0.00 0.00 2.57
315 316 9.479549 GGTTATTGGGATATTGGATGTATGAAT 57.520 33.333 0.00 0.00 0.00 2.57
319 320 9.833179 ATTGGGATATTGGATGTATGAATCTTT 57.167 29.630 0.00 0.00 0.00 2.52
320 321 8.868522 TGGGATATTGGATGTATGAATCTTTC 57.131 34.615 0.00 0.00 0.00 2.62
321 322 7.607607 TGGGATATTGGATGTATGAATCTTTCG 59.392 37.037 0.00 0.00 0.00 3.46
322 323 7.066284 GGGATATTGGATGTATGAATCTTTCGG 59.934 40.741 0.00 0.00 0.00 4.30
323 324 5.695851 ATTGGATGTATGAATCTTTCGGC 57.304 39.130 0.00 0.00 0.00 5.54
324 325 3.130633 TGGATGTATGAATCTTTCGGCG 58.869 45.455 0.00 0.00 0.00 6.46
325 326 3.131396 GGATGTATGAATCTTTCGGCGT 58.869 45.455 6.85 0.00 0.00 5.68
326 327 3.560068 GGATGTATGAATCTTTCGGCGTT 59.440 43.478 6.85 0.00 0.00 4.84
327 328 4.035208 GGATGTATGAATCTTTCGGCGTTT 59.965 41.667 6.85 0.00 0.00 3.60
328 329 5.448632 GGATGTATGAATCTTTCGGCGTTTT 60.449 40.000 6.85 0.00 0.00 2.43
329 330 4.965062 TGTATGAATCTTTCGGCGTTTTC 58.035 39.130 6.85 5.09 0.00 2.29
357 358 3.527641 AAAAACTTTCGGCGGCCA 58.472 50.000 20.71 3.24 0.00 5.36
358 359 1.066752 AAAAACTTTCGGCGGCCAC 59.933 52.632 20.71 0.00 0.00 5.01
359 360 1.668101 AAAAACTTTCGGCGGCCACA 61.668 50.000 20.71 0.95 0.00 4.17
360 361 1.668101 AAAACTTTCGGCGGCCACAA 61.668 50.000 20.71 8.11 0.00 3.33
361 362 2.344521 AAACTTTCGGCGGCCACAAC 62.345 55.000 20.71 0.00 0.00 3.32
362 363 2.978010 CTTTCGGCGGCCACAACT 60.978 61.111 20.71 0.00 0.00 3.16
363 364 2.517402 TTTCGGCGGCCACAACTT 60.517 55.556 20.71 0.00 0.00 2.66
364 365 2.458006 CTTTCGGCGGCCACAACTTC 62.458 60.000 20.71 0.00 0.00 3.01
365 366 3.758973 TTCGGCGGCCACAACTTCA 62.759 57.895 20.71 0.00 0.00 3.02
366 367 3.283684 CGGCGGCCACAACTTCAA 61.284 61.111 20.71 0.00 0.00 2.69
367 368 2.335011 GGCGGCCACAACTTCAAC 59.665 61.111 15.62 0.00 0.00 3.18
368 369 2.485795 GGCGGCCACAACTTCAACA 61.486 57.895 15.62 0.00 0.00 3.33
369 370 1.435515 GCGGCCACAACTTCAACAA 59.564 52.632 2.24 0.00 0.00 2.83
370 371 0.179124 GCGGCCACAACTTCAACAAA 60.179 50.000 2.24 0.00 0.00 2.83
371 372 1.537990 GCGGCCACAACTTCAACAAAT 60.538 47.619 2.24 0.00 0.00 2.32
372 373 2.820330 CGGCCACAACTTCAACAAATT 58.180 42.857 2.24 0.00 0.00 1.82
373 374 3.797184 GCGGCCACAACTTCAACAAATTA 60.797 43.478 2.24 0.00 0.00 1.40
374 375 4.555262 CGGCCACAACTTCAACAAATTAT 58.445 39.130 2.24 0.00 0.00 1.28
375 376 4.987912 CGGCCACAACTTCAACAAATTATT 59.012 37.500 2.24 0.00 0.00 1.40
376 377 5.118510 CGGCCACAACTTCAACAAATTATTC 59.881 40.000 2.24 0.00 0.00 1.75
377 378 6.223120 GGCCACAACTTCAACAAATTATTCT 58.777 36.000 0.00 0.00 0.00 2.40
378 379 6.705825 GGCCACAACTTCAACAAATTATTCTT 59.294 34.615 0.00 0.00 0.00 2.52
379 380 7.095649 GGCCACAACTTCAACAAATTATTCTTC 60.096 37.037 0.00 0.00 0.00 2.87
380 381 7.437862 GCCACAACTTCAACAAATTATTCTTCA 59.562 33.333 0.00 0.00 0.00 3.02
381 382 8.971321 CCACAACTTCAACAAATTATTCTTCAG 58.029 33.333 0.00 0.00 0.00 3.02
382 383 8.971321 CACAACTTCAACAAATTATTCTTCAGG 58.029 33.333 0.00 0.00 0.00 3.86
383 384 8.143835 ACAACTTCAACAAATTATTCTTCAGGG 58.856 33.333 0.00 0.00 0.00 4.45
384 385 6.691508 ACTTCAACAAATTATTCTTCAGGGC 58.308 36.000 0.00 0.00 0.00 5.19
385 386 5.309323 TCAACAAATTATTCTTCAGGGCG 57.691 39.130 0.00 0.00 0.00 6.13
386 387 4.764823 TCAACAAATTATTCTTCAGGGCGT 59.235 37.500 0.00 0.00 0.00 5.68
387 388 5.242838 TCAACAAATTATTCTTCAGGGCGTT 59.757 36.000 0.00 0.00 0.00 4.84
388 389 5.059404 ACAAATTATTCTTCAGGGCGTTG 57.941 39.130 0.00 0.00 0.00 4.10
389 390 4.082245 ACAAATTATTCTTCAGGGCGTTGG 60.082 41.667 0.00 0.00 0.00 3.77
390 391 2.871096 TTATTCTTCAGGGCGTTGGT 57.129 45.000 0.00 0.00 0.00 3.67
391 392 2.396590 TATTCTTCAGGGCGTTGGTC 57.603 50.000 0.00 0.00 0.00 4.02
392 393 0.322546 ATTCTTCAGGGCGTTGGTCC 60.323 55.000 0.00 0.00 38.61 4.46
393 394 2.725203 TTCTTCAGGGCGTTGGTCCG 62.725 60.000 0.00 0.00 44.97 4.79
394 395 4.323477 TTCAGGGCGTTGGTCCGG 62.323 66.667 0.00 0.00 44.97 5.14
400 401 3.580916 GCGTTGGTCCGGCATAAA 58.419 55.556 0.00 0.00 0.00 1.40
401 402 1.135939 GCGTTGGTCCGGCATAAAC 59.864 57.895 0.00 0.00 0.00 2.01
402 403 1.422269 CGTTGGTCCGGCATAAACG 59.578 57.895 14.14 14.14 37.82 3.60
403 404 1.293267 CGTTGGTCCGGCATAAACGT 61.293 55.000 17.72 0.00 38.92 3.99
404 405 0.167251 GTTGGTCCGGCATAAACGTG 59.833 55.000 0.00 0.00 0.00 4.49
405 406 0.956410 TTGGTCCGGCATAAACGTGG 60.956 55.000 0.00 0.00 0.00 4.94
406 407 2.757056 GGTCCGGCATAAACGTGGC 61.757 63.158 0.00 0.00 40.91 5.01
407 408 2.437002 TCCGGCATAAACGTGGCC 60.437 61.111 0.00 0.00 44.27 5.36
408 409 2.437716 CCGGCATAAACGTGGCCT 60.438 61.111 3.32 0.00 45.53 5.19
409 410 2.043980 CCGGCATAAACGTGGCCTT 61.044 57.895 3.32 0.00 45.53 4.35
410 411 1.136565 CGGCATAAACGTGGCCTTG 59.863 57.895 3.32 0.00 45.53 3.61
411 412 1.302383 CGGCATAAACGTGGCCTTGA 61.302 55.000 3.32 0.00 45.53 3.02
412 413 1.102978 GGCATAAACGTGGCCTTGAT 58.897 50.000 3.32 0.00 44.32 2.57
413 414 1.065551 GGCATAAACGTGGCCTTGATC 59.934 52.381 3.32 0.00 44.32 2.92
414 415 1.742831 GCATAAACGTGGCCTTGATCA 59.257 47.619 3.32 0.00 0.00 2.92
415 416 2.358898 GCATAAACGTGGCCTTGATCAT 59.641 45.455 3.32 0.00 0.00 2.45
416 417 3.181487 GCATAAACGTGGCCTTGATCATT 60.181 43.478 3.32 0.00 0.00 2.57
417 418 4.036262 GCATAAACGTGGCCTTGATCATTA 59.964 41.667 3.32 0.00 0.00 1.90
418 419 5.278463 GCATAAACGTGGCCTTGATCATTAT 60.278 40.000 3.32 0.00 0.00 1.28
419 420 4.900635 AAACGTGGCCTTGATCATTATC 57.099 40.909 3.32 0.00 0.00 1.75
420 421 2.483876 ACGTGGCCTTGATCATTATCG 58.516 47.619 3.32 0.38 34.60 2.92
421 422 2.102420 ACGTGGCCTTGATCATTATCGA 59.898 45.455 3.32 0.00 34.60 3.59
422 423 2.476619 CGTGGCCTTGATCATTATCGAC 59.523 50.000 3.32 0.00 34.60 4.20
423 424 2.808543 GTGGCCTTGATCATTATCGACC 59.191 50.000 3.32 0.00 34.60 4.79
424 425 2.705658 TGGCCTTGATCATTATCGACCT 59.294 45.455 3.32 0.00 34.60 3.85
425 426 3.244215 TGGCCTTGATCATTATCGACCTC 60.244 47.826 3.32 0.00 34.60 3.85
426 427 3.007398 GGCCTTGATCATTATCGACCTCT 59.993 47.826 0.00 0.00 34.60 3.69
427 428 4.241681 GCCTTGATCATTATCGACCTCTC 58.758 47.826 0.00 0.00 34.60 3.20
428 429 4.815269 CCTTGATCATTATCGACCTCTCC 58.185 47.826 0.00 0.00 34.60 3.71
429 430 4.526262 CCTTGATCATTATCGACCTCTCCT 59.474 45.833 0.00 0.00 34.60 3.69
430 431 5.011533 CCTTGATCATTATCGACCTCTCCTT 59.988 44.000 0.00 0.00 34.60 3.36
431 432 6.463614 CCTTGATCATTATCGACCTCTCCTTT 60.464 42.308 0.00 0.00 34.60 3.11
432 433 6.485830 TGATCATTATCGACCTCTCCTTTT 57.514 37.500 0.00 0.00 34.60 2.27
433 434 6.889198 TGATCATTATCGACCTCTCCTTTTT 58.111 36.000 0.00 0.00 34.60 1.94
434 435 8.018537 TGATCATTATCGACCTCTCCTTTTTA 57.981 34.615 0.00 0.00 34.60 1.52
435 436 8.144478 TGATCATTATCGACCTCTCCTTTTTAG 58.856 37.037 0.00 0.00 34.60 1.85
436 437 6.817184 TCATTATCGACCTCTCCTTTTTAGG 58.183 40.000 0.00 0.00 36.42 2.69
437 438 6.383147 TCATTATCGACCTCTCCTTTTTAGGT 59.617 38.462 0.00 0.00 46.33 3.08
474 475 9.938280 ACATGTACTGCTAGTTTTGTTATAAGA 57.062 29.630 0.00 0.00 0.00 2.10
507 508 9.851686 ATATATGTGTACTGTTGGTTTGATCAT 57.148 29.630 0.00 0.00 0.00 2.45
508 509 6.899393 ATGTGTACTGTTGGTTTGATCATT 57.101 33.333 0.00 0.00 0.00 2.57
509 510 7.994425 ATGTGTACTGTTGGTTTGATCATTA 57.006 32.000 0.00 0.00 0.00 1.90
510 511 7.433708 TGTGTACTGTTGGTTTGATCATTAG 57.566 36.000 0.00 0.00 0.00 1.73
511 512 7.220740 TGTGTACTGTTGGTTTGATCATTAGA 58.779 34.615 0.00 0.00 0.00 2.10
512 513 7.387673 TGTGTACTGTTGGTTTGATCATTAGAG 59.612 37.037 0.00 0.00 0.00 2.43
513 514 7.387948 GTGTACTGTTGGTTTGATCATTAGAGT 59.612 37.037 0.00 0.00 0.00 3.24
514 515 7.602644 TGTACTGTTGGTTTGATCATTAGAGTC 59.397 37.037 0.00 0.00 0.00 3.36
515 516 5.639506 ACTGTTGGTTTGATCATTAGAGTCG 59.360 40.000 0.00 0.00 0.00 4.18
516 517 4.935205 TGTTGGTTTGATCATTAGAGTCGG 59.065 41.667 0.00 0.00 0.00 4.79
517 518 4.137116 TGGTTTGATCATTAGAGTCGGG 57.863 45.455 0.00 0.00 0.00 5.14
518 519 2.872858 GGTTTGATCATTAGAGTCGGGC 59.127 50.000 0.00 0.00 0.00 6.13
519 520 2.509052 TTGATCATTAGAGTCGGGCG 57.491 50.000 0.00 0.00 0.00 6.13
520 521 1.399714 TGATCATTAGAGTCGGGCGT 58.600 50.000 0.00 0.00 0.00 5.68
521 522 1.754803 TGATCATTAGAGTCGGGCGTT 59.245 47.619 0.00 0.00 0.00 4.84
522 523 2.167693 TGATCATTAGAGTCGGGCGTTT 59.832 45.455 0.00 0.00 0.00 3.60
523 524 2.754946 TCATTAGAGTCGGGCGTTTT 57.245 45.000 0.00 0.00 0.00 2.43
524 525 2.613691 TCATTAGAGTCGGGCGTTTTC 58.386 47.619 0.00 0.00 0.00 2.29
525 526 2.232941 TCATTAGAGTCGGGCGTTTTCT 59.767 45.455 0.00 0.00 0.00 2.52
526 527 3.444742 TCATTAGAGTCGGGCGTTTTCTA 59.555 43.478 0.00 0.00 0.00 2.10
527 528 3.940209 TTAGAGTCGGGCGTTTTCTAA 57.060 42.857 0.00 0.00 0.00 2.10
528 529 2.825861 AGAGTCGGGCGTTTTCTAAA 57.174 45.000 0.00 0.00 0.00 1.85
529 530 3.116079 AGAGTCGGGCGTTTTCTAAAA 57.884 42.857 0.00 0.00 0.00 1.52
530 531 3.671716 AGAGTCGGGCGTTTTCTAAAAT 58.328 40.909 0.00 0.00 0.00 1.82
531 532 3.435671 AGAGTCGGGCGTTTTCTAAAATG 59.564 43.478 3.52 3.52 37.82 2.32
532 533 3.404899 AGTCGGGCGTTTTCTAAAATGA 58.595 40.909 10.78 0.00 37.12 2.57
533 534 3.816523 AGTCGGGCGTTTTCTAAAATGAA 59.183 39.130 10.78 0.00 37.12 2.57
534 535 4.276431 AGTCGGGCGTTTTCTAAAATGAAA 59.724 37.500 10.78 0.00 37.12 2.69
535 536 4.977347 GTCGGGCGTTTTCTAAAATGAAAA 59.023 37.500 10.78 0.00 41.75 2.29
536 537 5.631929 GTCGGGCGTTTTCTAAAATGAAAAT 59.368 36.000 10.78 0.00 44.42 1.82
537 538 6.802834 GTCGGGCGTTTTCTAAAATGAAAATA 59.197 34.615 10.78 0.00 44.42 1.40
538 539 7.007995 GTCGGGCGTTTTCTAAAATGAAAATAG 59.992 37.037 10.78 5.27 44.42 1.73
539 540 6.804783 CGGGCGTTTTCTAAAATGAAAATAGT 59.195 34.615 10.78 0.00 44.42 2.12
540 541 7.964011 CGGGCGTTTTCTAAAATGAAAATAGTA 59.036 33.333 10.78 0.00 44.42 1.82
541 542 9.285770 GGGCGTTTTCTAAAATGAAAATAGTAG 57.714 33.333 10.78 0.00 44.42 2.57
542 543 9.836076 GGCGTTTTCTAAAATGAAAATAGTAGT 57.164 29.630 10.78 0.00 44.42 2.73
600 602 1.337823 ACTAGTAACGTGCTGGGCTTG 60.338 52.381 0.00 0.00 0.00 4.01
666 668 4.948864 CGTAGCATTTACAGATACGGTG 57.051 45.455 3.39 0.00 44.74 4.94
667 669 3.734231 CGTAGCATTTACAGATACGGTGG 59.266 47.826 3.39 0.00 44.74 4.61
668 670 2.561569 AGCATTTACAGATACGGTGGC 58.438 47.619 0.00 0.00 0.00 5.01
953 971 3.057315 CACCCTCTGCCTGTGTATTTTTG 60.057 47.826 0.00 0.00 0.00 2.44
962 994 3.254166 CCTGTGTATTTTTGCTGCTGAGT 59.746 43.478 0.00 0.00 0.00 3.41
967 999 1.909700 TTTTTGCTGCTGAGTAGGGG 58.090 50.000 0.00 0.00 0.00 4.79
968 1000 1.064003 TTTTGCTGCTGAGTAGGGGA 58.936 50.000 0.00 0.00 0.00 4.81
1109 1141 2.285827 GAGAGGATCGAAGGTGTGTG 57.714 55.000 0.00 0.00 42.67 3.82
1149 1181 1.068895 CGATTCAGCTGGAGAGAGCAT 59.931 52.381 15.13 0.00 41.83 3.79
1194 1227 2.307098 AGCCTTTGATGCTCTGGTAGTT 59.693 45.455 0.00 0.00 32.41 2.24
1195 1228 3.519510 AGCCTTTGATGCTCTGGTAGTTA 59.480 43.478 0.00 0.00 32.41 2.24
1196 1229 3.873952 GCCTTTGATGCTCTGGTAGTTAG 59.126 47.826 0.00 0.00 0.00 2.34
1197 1230 4.624125 GCCTTTGATGCTCTGGTAGTTAGT 60.624 45.833 0.00 0.00 0.00 2.24
1198 1231 5.112686 CCTTTGATGCTCTGGTAGTTAGTC 58.887 45.833 0.00 0.00 0.00 2.59
1199 1232 5.105146 CCTTTGATGCTCTGGTAGTTAGTCT 60.105 44.000 0.00 0.00 0.00 3.24
1200 1233 6.360370 TTTGATGCTCTGGTAGTTAGTCTT 57.640 37.500 0.00 0.00 0.00 3.01
1201 1234 6.360370 TTGATGCTCTGGTAGTTAGTCTTT 57.640 37.500 0.00 0.00 0.00 2.52
1202 1235 7.476540 TTGATGCTCTGGTAGTTAGTCTTTA 57.523 36.000 0.00 0.00 0.00 1.85
1224 1257 1.889545 ACTGTTCTTCTTCCTGCTGC 58.110 50.000 0.00 0.00 0.00 5.25
1225 1258 1.163554 CTGTTCTTCTTCCTGCTGCC 58.836 55.000 0.00 0.00 0.00 4.85
1226 1259 0.603707 TGTTCTTCTTCCTGCTGCCG 60.604 55.000 0.00 0.00 0.00 5.69
1227 1260 0.603975 GTTCTTCTTCCTGCTGCCGT 60.604 55.000 0.00 0.00 0.00 5.68
1228 1261 0.603707 TTCTTCTTCCTGCTGCCGTG 60.604 55.000 0.00 0.00 0.00 4.94
1229 1262 2.669569 TTCTTCCTGCTGCCGTGC 60.670 61.111 0.00 0.00 0.00 5.34
1266 1299 0.319383 CGAGCTCGATTGATCCCCAG 60.319 60.000 32.06 0.00 43.02 4.45
1278 1311 2.325393 ATCCCCAGAAATCCGCGGTC 62.325 60.000 27.15 16.05 0.00 4.79
1333 1375 4.056125 GGGGCGCTGCTTTTGGAC 62.056 66.667 7.64 0.00 0.00 4.02
1350 1392 2.267642 CCGAATCCTGCCGGTTGA 59.732 61.111 1.90 0.00 40.78 3.18
1392 1434 3.804153 ATGAGATCTGCGGCCGCTG 62.804 63.158 45.79 43.41 42.51 5.18
1402 1444 3.508840 GGCCGCTGGACCAATTCG 61.509 66.667 0.00 0.00 0.00 3.34
1403 1445 3.508840 GCCGCTGGACCAATTCGG 61.509 66.667 19.53 19.53 42.68 4.30
1404 1446 2.824041 CCGCTGGACCAATTCGGG 60.824 66.667 17.24 5.35 40.22 5.14
1405 1447 2.267642 CGCTGGACCAATTCGGGA 59.732 61.111 0.00 0.00 40.22 5.14
1406 1448 2.106683 CGCTGGACCAATTCGGGAC 61.107 63.158 0.00 0.00 40.22 4.46
1419 1461 4.408821 GGGACGTGATGGCCAGCA 62.409 66.667 22.27 22.27 0.00 4.41
1420 1462 3.127533 GGACGTGATGGCCAGCAC 61.128 66.667 38.25 38.25 43.66 4.40
1425 1467 4.649845 TGATGGCCAGCACATCAG 57.350 55.556 22.27 0.00 46.99 2.90
1426 1468 1.751544 TGATGGCCAGCACATCAGC 60.752 57.895 22.27 0.00 46.99 4.26
1427 1469 2.206182 TGATGGCCAGCACATCAGCT 62.206 55.000 22.27 0.00 46.99 4.24
1437 1479 1.079819 ACATCAGCTGTTCGTCCCG 60.080 57.895 14.67 0.00 32.90 5.14
1464 1509 2.991190 TCGCCGCGATAGGATTTTATTC 59.009 45.455 12.39 0.00 0.00 1.75
1465 1510 2.093783 CGCCGCGATAGGATTTTATTCC 59.906 50.000 8.23 0.00 35.90 3.01
1470 1515 2.222508 CGATAGGATTTTATTCCGCGCG 60.223 50.000 25.67 25.67 40.94 6.86
1496 1541 0.249573 TCCGACTTTTGGTCACCGAC 60.250 55.000 0.00 0.00 44.70 4.79
1497 1542 0.531090 CCGACTTTTGGTCACCGACA 60.531 55.000 0.00 0.00 44.70 4.35
1498 1543 0.859232 CGACTTTTGGTCACCGACAG 59.141 55.000 0.00 0.00 44.70 3.51
1499 1544 1.226746 GACTTTTGGTCACCGACAGG 58.773 55.000 2.11 0.00 43.94 4.00
1500 1545 0.818040 ACTTTTGGTCACCGACAGGC 60.818 55.000 2.11 0.00 42.76 4.85
1555 1600 1.883084 GCGCCTACCTCAATCACCG 60.883 63.158 0.00 0.00 0.00 4.94
1596 1648 8.974060 TGTATTATTAAACCTCCCTGTGATTC 57.026 34.615 0.00 0.00 0.00 2.52
1605 1657 0.254178 CCCTGTGATTCTGGACTGGG 59.746 60.000 0.00 0.00 42.81 4.45
1633 1685 0.030504 TTGTCTGTTGCGTTGCCATG 59.969 50.000 0.00 0.00 0.00 3.66
1657 1709 1.347707 TCTACCAACAGCCCACTCAAG 59.652 52.381 0.00 0.00 0.00 3.02
1758 1820 0.037303 CAGGGAGTGCTGGTGATGTT 59.963 55.000 0.00 0.00 0.00 2.71
1980 2042 1.254026 CGACCTGTGACCTTACTCCA 58.746 55.000 0.00 0.00 0.00 3.86
1986 2048 1.286248 GTGACCTTACTCCATGGGGT 58.714 55.000 23.68 23.68 34.93 4.95
2004 2066 1.243902 GTCATCCGTTGCCCTTCAAA 58.756 50.000 0.00 0.00 36.26 2.69
2073 2135 1.523032 CTATTGGAACCGGACGGCC 60.523 63.158 9.46 0.00 39.32 6.13
2175 2237 6.255596 GGAAACCTGAATCTTCCAACTTAC 57.744 41.667 0.00 0.00 38.80 2.34
2176 2238 5.768164 GGAAACCTGAATCTTCCAACTTACA 59.232 40.000 0.00 0.00 38.80 2.41
2177 2239 6.434340 GGAAACCTGAATCTTCCAACTTACAT 59.566 38.462 0.00 0.00 38.80 2.29
2178 2240 7.610305 GGAAACCTGAATCTTCCAACTTACATA 59.390 37.037 0.00 0.00 38.80 2.29
2179 2241 9.178758 GAAACCTGAATCTTCCAACTTACATAT 57.821 33.333 0.00 0.00 0.00 1.78
2180 2242 9.533831 AAACCTGAATCTTCCAACTTACATATT 57.466 29.630 0.00 0.00 0.00 1.28
2182 2244 9.614792 ACCTGAATCTTCCAACTTACATATTAC 57.385 33.333 0.00 0.00 0.00 1.89
2183 2245 9.838339 CCTGAATCTTCCAACTTACATATTACT 57.162 33.333 0.00 0.00 0.00 2.24
2185 2247 9.832445 TGAATCTTCCAACTTACATATTACTCC 57.168 33.333 0.00 0.00 0.00 3.85
2186 2248 9.274206 GAATCTTCCAACTTACATATTACTCCC 57.726 37.037 0.00 0.00 0.00 4.30
2187 2249 7.989947 TCTTCCAACTTACATATTACTCCCT 57.010 36.000 0.00 0.00 0.00 4.20
2188 2250 7.792032 TCTTCCAACTTACATATTACTCCCTG 58.208 38.462 0.00 0.00 0.00 4.45
2189 2251 7.402071 TCTTCCAACTTACATATTACTCCCTGT 59.598 37.037 0.00 0.00 0.00 4.00
2190 2252 6.884832 TCCAACTTACATATTACTCCCTGTG 58.115 40.000 0.00 0.00 0.00 3.66
2191 2253 6.442564 TCCAACTTACATATTACTCCCTGTGT 59.557 38.462 0.00 0.00 0.00 3.72
2192 2254 7.620491 TCCAACTTACATATTACTCCCTGTGTA 59.380 37.037 0.00 0.00 0.00 2.90
2193 2255 8.262227 CCAACTTACATATTACTCCCTGTGTAA 58.738 37.037 0.00 0.00 34.87 2.41
2194 2256 9.661563 CAACTTACATATTACTCCCTGTGTAAA 57.338 33.333 0.00 0.00 33.31 2.01
2195 2257 9.662947 AACTTACATATTACTCCCTGTGTAAAC 57.337 33.333 0.00 0.00 33.31 2.01
2196 2258 9.043548 ACTTACATATTACTCCCTGTGTAAACT 57.956 33.333 0.00 0.00 33.31 2.66
2207 2269 9.490083 ACTCCCTGTGTAAACTAATATAAGAGT 57.510 33.333 0.00 0.00 0.00 3.24
2208 2270 9.751542 CTCCCTGTGTAAACTAATATAAGAGTG 57.248 37.037 0.00 0.00 0.00 3.51
2209 2271 9.263446 TCCCTGTGTAAACTAATATAAGAGTGT 57.737 33.333 0.00 0.00 0.00 3.55
2210 2272 9.886132 CCCTGTGTAAACTAATATAAGAGTGTT 57.114 33.333 0.00 0.00 0.00 3.32
2244 2306 9.654663 AACTAAAATAGTGATCTAAACGCTCTT 57.345 29.630 0.00 0.00 39.39 2.85
2258 2320 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
2259 2321 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
2260 2322 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
2261 2323 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2262 2324 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2263 2325 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
2264 2326 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
2305 2368 7.282224 GGAATGGATGTACTTTGCACACTTATA 59.718 37.037 0.00 0.00 0.00 0.98
2306 2369 6.978343 TGGATGTACTTTGCACACTTATAC 57.022 37.500 0.00 0.00 0.00 1.47
2308 2371 6.370442 TGGATGTACTTTGCACACTTATACAC 59.630 38.462 0.00 0.00 0.00 2.90
2311 2374 4.725556 ACTTTGCACACTTATACACACG 57.274 40.909 0.00 0.00 0.00 4.49
2320 2383 3.059257 CACTTATACACACGCTTTGCACA 60.059 43.478 0.00 0.00 0.00 4.57
2322 2385 1.593196 ATACACACGCTTTGCACACT 58.407 45.000 0.00 0.00 0.00 3.55
2365 2428 9.500785 TTGATGACTGTTCATTCACTTATGTAA 57.499 29.630 0.00 0.00 42.95 2.41
2614 2690 1.525175 AAACTCACCTTGTACCCCCA 58.475 50.000 0.00 0.00 0.00 4.96
2668 2744 2.029200 TGGTTTGTTCTACGATACGGCA 60.029 45.455 0.00 0.00 0.00 5.69
2729 2805 3.901222 TCTGAAACATGTGGTACTCCTCA 59.099 43.478 0.00 0.00 40.73 3.86
2730 2806 4.532126 TCTGAAACATGTGGTACTCCTCAT 59.468 41.667 0.00 0.00 45.30 2.90
2731 2807 5.719563 TCTGAAACATGTGGTACTCCTCATA 59.280 40.000 0.00 0.00 43.41 2.15
2732 2808 6.212589 TCTGAAACATGTGGTACTCCTCATAA 59.787 38.462 0.00 0.00 43.41 1.90
2733 2809 6.406370 TGAAACATGTGGTACTCCTCATAAG 58.594 40.000 0.00 0.00 43.41 1.73
2734 2810 6.013725 TGAAACATGTGGTACTCCTCATAAGT 60.014 38.462 0.00 0.00 43.41 2.24
2735 2811 5.599999 ACATGTGGTACTCCTCATAAGTC 57.400 43.478 0.00 0.00 43.41 3.01
2874 2994 2.036731 ATCTCGACGGACCACCCA 59.963 61.111 0.00 0.00 34.14 4.51
2886 3006 0.420272 ACCACCCACCCACCTACTAT 59.580 55.000 0.00 0.00 0.00 2.12
2901 3021 0.826715 ACTATGAGGACATGCAGCGT 59.173 50.000 0.00 0.00 37.87 5.07
3216 3336 1.450312 CCACCAGATCCTGAACGGC 60.450 63.158 0.00 0.00 32.44 5.68
3324 3444 0.464036 TGAAGCCATGGTAGGTAGCG 59.536 55.000 14.67 0.00 0.00 4.26
3351 3477 0.454600 CATTGGCACCATGAGCTGAC 59.545 55.000 0.00 0.00 0.00 3.51
3394 3528 3.027412 GAGAGGACTGATGAGTAAGCCA 58.973 50.000 0.00 0.00 30.16 4.75
3450 3596 3.995636 AGCTCCTTCCTGTCTAATACCA 58.004 45.455 0.00 0.00 0.00 3.25
3451 3597 3.707102 AGCTCCTTCCTGTCTAATACCAC 59.293 47.826 0.00 0.00 0.00 4.16
3452 3598 3.181464 GCTCCTTCCTGTCTAATACCACC 60.181 52.174 0.00 0.00 0.00 4.61
3498 3644 1.755179 CCTGCCTACCTTCCATGTTG 58.245 55.000 0.00 0.00 0.00 3.33
3615 3763 7.441157 TGCATGACCTTTGTATTATACTGCTAC 59.559 37.037 0.00 0.00 0.00 3.58
3669 3820 8.983702 AATTAAGTAAGGTTAACAACAGACCA 57.016 30.769 8.10 0.00 35.89 4.02
3673 3824 4.772886 AAGGTTAACAACAGACCAGTCT 57.227 40.909 8.10 0.00 41.37 3.24
3720 3877 2.099831 GCTTGTCGCTGAGCATGC 59.900 61.111 10.51 10.51 38.73 4.06
3737 3894 0.878416 TGCCTGCCGTTTGTATTGTC 59.122 50.000 0.00 0.00 0.00 3.18
3756 3913 2.093764 GTCTGAAGGCAGCACAGTATCT 60.094 50.000 11.43 0.00 42.01 1.98
3759 3916 2.275318 GAAGGCAGCACAGTATCTGTC 58.725 52.381 0.00 0.00 43.43 3.51
3761 3918 1.206610 AGGCAGCACAGTATCTGTCTG 59.793 52.381 7.99 16.82 43.43 3.51
3762 3919 1.649664 GCAGCACAGTATCTGTCTGG 58.350 55.000 19.73 6.48 43.43 3.86
3776 3933 4.894784 TCTGTCTGGTCTTTGGTTGATAC 58.105 43.478 0.00 0.00 0.00 2.24
3782 3939 5.014123 TCTGGTCTTTGGTTGATACCTTGAT 59.986 40.000 0.00 0.00 45.27 2.57
3783 3940 5.253330 TGGTCTTTGGTTGATACCTTGATC 58.747 41.667 0.00 0.00 45.27 2.92
3785 3942 5.946377 GGTCTTTGGTTGATACCTTGATCTT 59.054 40.000 0.00 0.00 45.27 2.40
3788 3945 9.010029 GTCTTTGGTTGATACCTTGATCTTTTA 57.990 33.333 0.00 0.00 45.27 1.52
3813 3970 4.521256 GTGACACCACAGGGCTTTTATTTA 59.479 41.667 0.00 0.00 42.72 1.40
3826 3983 8.253113 AGGGCTTTTATTTAGAACATCAATGTG 58.747 33.333 0.00 0.00 41.61 3.21
3829 3986 9.143631 GCTTTTATTTAGAACATCAATGTGCTT 57.856 29.630 8.90 0.00 44.25 3.91
3836 3994 3.855689 ACATCAATGTGCTTGGCTTAC 57.144 42.857 0.00 0.00 40.03 2.34
3890 4048 1.065600 GCAACTTGCAAGGAACGCA 59.934 52.632 29.18 0.00 44.26 5.24
3893 4051 1.152963 ACTTGCAAGGAACGCAGGT 60.153 52.632 29.18 3.84 43.96 4.00
3995 4153 2.142356 TGCATCCCTGTTAACATGGG 57.858 50.000 25.58 25.58 42.20 4.00
4010 4168 2.099098 ACATGGGCAAGCGTATAAAAGC 59.901 45.455 0.00 0.00 0.00 3.51
4013 4171 1.065551 GGGCAAGCGTATAAAAGCCTG 59.934 52.381 0.00 0.00 41.71 4.85
4014 4172 1.065551 GGCAAGCGTATAAAAGCCTGG 59.934 52.381 0.00 0.00 39.02 4.45
4078 4237 2.694760 CCTGCCCTTCGCTTTGCTC 61.695 63.158 0.00 0.00 38.78 4.26
4080 4239 2.360475 GCCCTTCGCTTTGCTCCT 60.360 61.111 0.00 0.00 0.00 3.69
4082 4241 1.302832 CCCTTCGCTTTGCTCCTGT 60.303 57.895 0.00 0.00 0.00 4.00
4087 4267 0.679505 TCGCTTTGCTCCTGTACACT 59.320 50.000 0.00 0.00 0.00 3.55
4091 4271 2.996621 GCTTTGCTCCTGTACACTAGTG 59.003 50.000 21.44 21.44 0.00 2.74
4144 4326 2.238521 GAGCCCAAACCATTCAAGACA 58.761 47.619 0.00 0.00 0.00 3.41
4145 4327 2.627699 GAGCCCAAACCATTCAAGACAA 59.372 45.455 0.00 0.00 0.00 3.18
4146 4328 3.037549 AGCCCAAACCATTCAAGACAAA 58.962 40.909 0.00 0.00 0.00 2.83
4148 4330 3.803368 GCCCAAACCATTCAAGACAAAGG 60.803 47.826 0.00 0.00 0.00 3.11
4168 4350 3.751698 AGGACGGTTAACAGAATTTGAGC 59.248 43.478 12.91 0.00 0.00 4.26
4174 4356 4.988540 GGTTAACAGAATTTGAGCCCAAAC 59.011 41.667 8.10 0.00 44.16 2.93
4178 4360 2.892852 CAGAATTTGAGCCCAAACCTCA 59.107 45.455 0.00 0.00 44.16 3.86
4183 4365 2.561478 TGAGCCCAAACCTCAGTTAC 57.439 50.000 0.00 0.00 34.59 2.50
4185 4367 1.001633 GAGCCCAAACCTCAGTTACGA 59.998 52.381 0.00 0.00 34.19 3.43
4191 4373 2.869801 CAAACCTCAGTTACGAGCAACA 59.130 45.455 0.00 0.00 34.19 3.33
4193 4375 1.411246 ACCTCAGTTACGAGCAACACA 59.589 47.619 0.00 0.00 0.00 3.72
4194 4376 2.159014 ACCTCAGTTACGAGCAACACAA 60.159 45.455 0.00 0.00 0.00 3.33
4195 4377 2.221055 CCTCAGTTACGAGCAACACAAC 59.779 50.000 0.00 0.00 0.00 3.32
4196 4378 1.855978 TCAGTTACGAGCAACACAACG 59.144 47.619 0.00 0.00 0.00 4.10
4198 4380 0.383860 GTTACGAGCAACACAACGCC 60.384 55.000 0.00 0.00 0.00 5.68
4200 4382 2.646117 TACGAGCAACACAACGCCCA 62.646 55.000 0.00 0.00 0.00 5.36
4208 4390 1.308069 ACACAACGCCCATGCTGATC 61.308 55.000 0.00 0.00 34.43 2.92
4209 4391 2.108514 ACAACGCCCATGCTGATCG 61.109 57.895 0.00 0.00 34.43 3.69
4212 4394 3.274586 CGCCCATGCTGATCGGTG 61.275 66.667 2.89 0.00 34.43 4.94
4215 4397 0.820891 GCCCATGCTGATCGGTGATT 60.821 55.000 2.89 0.00 33.53 2.57
4221 4403 5.240891 CCATGCTGATCGGTGATTATAAGT 58.759 41.667 2.89 0.00 0.00 2.24
4222 4404 5.702670 CCATGCTGATCGGTGATTATAAGTT 59.297 40.000 2.89 0.00 0.00 2.66
4223 4405 6.205464 CCATGCTGATCGGTGATTATAAGTTT 59.795 38.462 2.89 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 4.520846 CCGCTCATTCGCCGTTGC 62.521 66.667 0.00 0.00 0.00 4.17
17 18 2.802667 CTCCGCTCATTCGCCGTTG 61.803 63.158 0.00 0.00 0.00 4.10
18 19 2.298158 ATCTCCGCTCATTCGCCGTT 62.298 55.000 0.00 0.00 0.00 4.44
19 20 1.452953 TATCTCCGCTCATTCGCCGT 61.453 55.000 0.00 0.00 0.00 5.68
20 21 0.109086 ATATCTCCGCTCATTCGCCG 60.109 55.000 0.00 0.00 0.00 6.46
21 22 1.728971 CAATATCTCCGCTCATTCGCC 59.271 52.381 0.00 0.00 0.00 5.54
22 23 1.127582 GCAATATCTCCGCTCATTCGC 59.872 52.381 0.00 0.00 0.00 4.70
23 24 2.681706 AGCAATATCTCCGCTCATTCG 58.318 47.619 0.00 0.00 0.00 3.34
24 25 4.314121 AGAAGCAATATCTCCGCTCATTC 58.686 43.478 0.00 0.00 34.11 2.67
25 26 4.314121 GAGAAGCAATATCTCCGCTCATT 58.686 43.478 0.00 0.00 37.86 2.57
26 27 3.924144 GAGAAGCAATATCTCCGCTCAT 58.076 45.455 0.00 0.00 37.86 2.90
27 28 3.377346 GAGAAGCAATATCTCCGCTCA 57.623 47.619 0.00 0.00 37.86 4.26
33 34 5.163561 CCGAGGATAGGAGAAGCAATATCTC 60.164 48.000 0.00 0.00 42.09 2.75
34 35 4.709397 CCGAGGATAGGAGAAGCAATATCT 59.291 45.833 0.00 0.00 29.15 1.98
35 36 4.679372 GCCGAGGATAGGAGAAGCAATATC 60.679 50.000 0.00 0.00 29.15 1.63
36 37 3.196685 GCCGAGGATAGGAGAAGCAATAT 59.803 47.826 0.00 0.00 29.15 1.28
37 38 2.563179 GCCGAGGATAGGAGAAGCAATA 59.437 50.000 0.00 0.00 29.15 1.90
38 39 1.346068 GCCGAGGATAGGAGAAGCAAT 59.654 52.381 0.00 0.00 29.15 3.56
39 40 0.753262 GCCGAGGATAGGAGAAGCAA 59.247 55.000 0.00 0.00 29.15 3.91
40 41 1.456196 CGCCGAGGATAGGAGAAGCA 61.456 60.000 0.00 0.00 31.02 3.91
41 42 1.287503 CGCCGAGGATAGGAGAAGC 59.712 63.158 0.00 0.00 31.02 3.86
42 43 0.312416 CACGCCGAGGATAGGAGAAG 59.688 60.000 0.00 0.00 33.66 2.85
43 44 0.395311 ACACGCCGAGGATAGGAGAA 60.395 55.000 0.00 0.00 33.66 2.87
44 45 1.101635 CACACGCCGAGGATAGGAGA 61.102 60.000 0.00 0.00 33.66 3.71
45 46 1.360551 CACACGCCGAGGATAGGAG 59.639 63.158 0.00 0.00 36.60 3.69
46 47 2.782222 GCACACGCCGAGGATAGGA 61.782 63.158 0.00 0.00 29.15 2.94
47 48 2.279517 GCACACGCCGAGGATAGG 60.280 66.667 0.00 0.00 0.00 2.57
57 58 1.875813 CATCTCTCTCGGCACACGC 60.876 63.158 0.00 0.00 43.86 5.34
58 59 1.226802 CCATCTCTCTCGGCACACG 60.227 63.158 0.00 0.00 46.11 4.49
59 60 1.142748 CCCATCTCTCTCGGCACAC 59.857 63.158 0.00 0.00 0.00 3.82
60 61 1.305297 ACCCATCTCTCTCGGCACA 60.305 57.895 0.00 0.00 0.00 4.57
61 62 1.439644 GACCCATCTCTCTCGGCAC 59.560 63.158 0.00 0.00 0.00 5.01
62 63 2.121538 CGACCCATCTCTCTCGGCA 61.122 63.158 0.00 0.00 0.00 5.69
63 64 2.725008 CGACCCATCTCTCTCGGC 59.275 66.667 0.00 0.00 0.00 5.54
64 65 2.851071 GCCGACCCATCTCTCTCGG 61.851 68.421 0.50 0.50 46.97 4.63
65 66 2.725008 GCCGACCCATCTCTCTCG 59.275 66.667 0.00 0.00 0.00 4.04
66 67 1.791103 CTCGCCGACCCATCTCTCTC 61.791 65.000 0.00 0.00 0.00 3.20
67 68 1.826054 CTCGCCGACCCATCTCTCT 60.826 63.158 0.00 0.00 0.00 3.10
68 69 1.175983 ATCTCGCCGACCCATCTCTC 61.176 60.000 0.00 0.00 0.00 3.20
69 70 1.152652 ATCTCGCCGACCCATCTCT 60.153 57.895 0.00 0.00 0.00 3.10
70 71 1.175983 AGATCTCGCCGACCCATCTC 61.176 60.000 0.00 0.00 0.00 2.75
71 72 1.152652 AGATCTCGCCGACCCATCT 60.153 57.895 0.00 0.00 0.00 2.90
72 73 1.287503 GAGATCTCGCCGACCCATC 59.712 63.158 7.04 0.00 0.00 3.51
73 74 1.455773 TGAGATCTCGCCGACCCAT 60.456 57.895 17.76 0.00 0.00 4.00
74 75 2.044352 TGAGATCTCGCCGACCCA 60.044 61.111 17.76 0.00 0.00 4.51
75 76 2.725008 CTGAGATCTCGCCGACCC 59.275 66.667 17.76 0.00 0.00 4.46
76 77 1.384989 TTCCTGAGATCTCGCCGACC 61.385 60.000 17.76 0.00 0.00 4.79
77 78 0.030101 CTTCCTGAGATCTCGCCGAC 59.970 60.000 17.76 0.00 0.00 4.79
78 79 1.729470 GCTTCCTGAGATCTCGCCGA 61.729 60.000 17.76 9.77 0.00 5.54
79 80 1.299773 GCTTCCTGAGATCTCGCCG 60.300 63.158 17.76 8.60 0.00 6.46
80 81 0.529555 GTGCTTCCTGAGATCTCGCC 60.530 60.000 17.76 5.51 0.00 5.54
81 82 0.459489 AGTGCTTCCTGAGATCTCGC 59.541 55.000 17.76 14.25 0.00 5.03
82 83 1.202394 CCAGTGCTTCCTGAGATCTCG 60.202 57.143 17.76 12.02 34.23 4.04
83 84 1.830477 ACCAGTGCTTCCTGAGATCTC 59.170 52.381 16.21 16.21 34.23 2.75
84 85 1.949799 ACCAGTGCTTCCTGAGATCT 58.050 50.000 0.00 0.00 34.23 2.75
85 86 2.746362 CAAACCAGTGCTTCCTGAGATC 59.254 50.000 0.94 0.00 34.23 2.75
86 87 2.373169 TCAAACCAGTGCTTCCTGAGAT 59.627 45.455 0.94 0.00 34.23 2.75
87 88 1.768275 TCAAACCAGTGCTTCCTGAGA 59.232 47.619 0.94 0.00 34.23 3.27
88 89 2.149578 CTCAAACCAGTGCTTCCTGAG 58.850 52.381 0.94 0.00 34.23 3.35
89 90 1.768275 TCTCAAACCAGTGCTTCCTGA 59.232 47.619 0.94 0.00 34.23 3.86
90 91 2.260844 TCTCAAACCAGTGCTTCCTG 57.739 50.000 0.00 0.00 0.00 3.86
91 92 2.092429 TGTTCTCAAACCAGTGCTTCCT 60.092 45.455 0.00 0.00 34.28 3.36
92 93 2.297701 TGTTCTCAAACCAGTGCTTCC 58.702 47.619 0.00 0.00 34.28 3.46
93 94 4.370364 TTTGTTCTCAAACCAGTGCTTC 57.630 40.909 0.00 0.00 38.44 3.86
94 95 4.799564 TTTTGTTCTCAAACCAGTGCTT 57.200 36.364 0.00 0.00 42.28 3.91
95 96 6.265196 TCATATTTTGTTCTCAAACCAGTGCT 59.735 34.615 0.00 0.00 42.28 4.40
96 97 6.363357 GTCATATTTTGTTCTCAAACCAGTGC 59.637 38.462 0.00 0.00 42.28 4.40
97 98 7.651808 AGTCATATTTTGTTCTCAAACCAGTG 58.348 34.615 0.00 0.00 42.28 3.66
98 99 7.823745 AGTCATATTTTGTTCTCAAACCAGT 57.176 32.000 0.00 0.00 42.28 4.00
111 112 9.608617 GCTGACATCATCATAAGTCATATTTTG 57.391 33.333 0.00 0.00 39.92 2.44
112 113 8.790718 GGCTGACATCATCATAAGTCATATTTT 58.209 33.333 0.00 0.00 39.92 1.82
113 114 7.118825 CGGCTGACATCATCATAAGTCATATTT 59.881 37.037 0.00 0.00 39.92 1.40
114 115 6.592994 CGGCTGACATCATCATAAGTCATATT 59.407 38.462 0.00 0.00 39.92 1.28
115 116 6.104665 CGGCTGACATCATCATAAGTCATAT 58.895 40.000 0.00 0.00 39.92 1.78
116 117 5.473039 CGGCTGACATCATCATAAGTCATA 58.527 41.667 0.00 0.00 39.92 2.15
117 118 4.313282 CGGCTGACATCATCATAAGTCAT 58.687 43.478 0.00 0.00 39.92 3.06
118 119 3.721035 CGGCTGACATCATCATAAGTCA 58.279 45.455 0.00 0.00 36.48 3.41
119 120 2.478134 GCGGCTGACATCATCATAAGTC 59.522 50.000 0.00 0.00 36.48 3.01
120 121 2.487934 GCGGCTGACATCATCATAAGT 58.512 47.619 0.00 0.00 36.48 2.24
121 122 1.458445 CGCGGCTGACATCATCATAAG 59.542 52.381 0.00 0.00 36.48 1.73
122 123 1.501169 CGCGGCTGACATCATCATAA 58.499 50.000 0.00 0.00 36.48 1.90
123 124 0.319813 CCGCGGCTGACATCATCATA 60.320 55.000 14.67 0.00 36.48 2.15
124 125 1.596203 CCGCGGCTGACATCATCAT 60.596 57.895 14.67 0.00 36.48 2.45
125 126 2.202919 CCGCGGCTGACATCATCA 60.203 61.111 14.67 0.00 35.45 3.07
126 127 3.643978 GCCGCGGCTGACATCATC 61.644 66.667 41.71 9.84 38.26 2.92
140 141 3.032609 GAGTCATCGATGCCGCCG 61.033 66.667 20.81 0.00 35.37 6.46
147 148 9.946862 GTGAATCTACACCAACGAGTCATCGAT 62.947 44.444 4.44 0.00 41.63 3.59
148 149 8.750403 GTGAATCTACACCAACGAGTCATCGA 62.750 46.154 4.44 0.00 41.63 3.59
149 150 6.678399 GTGAATCTACACCAACGAGTCATCG 61.678 48.000 0.00 0.00 43.09 3.84
150 151 4.563184 GTGAATCTACACCAACGAGTCATC 59.437 45.833 0.00 0.00 34.81 2.92
151 152 4.495422 GTGAATCTACACCAACGAGTCAT 58.505 43.478 0.00 0.00 34.81 3.06
152 153 3.610821 CGTGAATCTACACCAACGAGTCA 60.611 47.826 0.00 0.00 37.48 3.41
153 154 2.915463 CGTGAATCTACACCAACGAGTC 59.085 50.000 0.00 0.00 37.48 3.36
154 155 2.925306 GCGTGAATCTACACCAACGAGT 60.925 50.000 0.00 0.00 37.48 4.18
155 156 1.654105 GCGTGAATCTACACCAACGAG 59.346 52.381 0.00 0.00 37.48 4.18
156 157 1.271379 AGCGTGAATCTACACCAACGA 59.729 47.619 0.00 0.00 37.48 3.85
157 158 1.390123 CAGCGTGAATCTACACCAACG 59.610 52.381 0.00 0.00 37.48 4.10
158 159 2.412089 GTCAGCGTGAATCTACACCAAC 59.588 50.000 0.00 0.00 37.48 3.77
159 160 2.611971 GGTCAGCGTGAATCTACACCAA 60.612 50.000 0.00 0.00 37.48 3.67
160 161 1.067142 GGTCAGCGTGAATCTACACCA 60.067 52.381 0.00 0.00 37.48 4.17
161 162 1.204941 AGGTCAGCGTGAATCTACACC 59.795 52.381 0.00 0.00 37.48 4.16
162 163 2.164624 AGAGGTCAGCGTGAATCTACAC 59.835 50.000 0.00 0.00 37.42 2.90
163 164 2.447443 AGAGGTCAGCGTGAATCTACA 58.553 47.619 0.00 0.00 0.00 2.74
164 165 3.119459 TCAAGAGGTCAGCGTGAATCTAC 60.119 47.826 0.00 0.00 28.26 2.59
165 166 3.089284 TCAAGAGGTCAGCGTGAATCTA 58.911 45.455 0.00 0.00 28.26 1.98
166 167 1.895798 TCAAGAGGTCAGCGTGAATCT 59.104 47.619 0.00 0.00 0.00 2.40
167 168 1.996191 GTCAAGAGGTCAGCGTGAATC 59.004 52.381 0.00 0.00 0.00 2.52
168 169 1.670087 CGTCAAGAGGTCAGCGTGAAT 60.670 52.381 0.00 0.00 0.00 2.57
169 170 0.318699 CGTCAAGAGGTCAGCGTGAA 60.319 55.000 0.00 0.00 0.00 3.18
170 171 1.170290 TCGTCAAGAGGTCAGCGTGA 61.170 55.000 0.00 0.00 0.00 4.35
171 172 0.109086 ATCGTCAAGAGGTCAGCGTG 60.109 55.000 0.00 0.00 0.00 5.34
172 173 1.132643 GTATCGTCAAGAGGTCAGCGT 59.867 52.381 0.00 0.00 0.00 5.07
173 174 1.132453 TGTATCGTCAAGAGGTCAGCG 59.868 52.381 0.00 0.00 0.00 5.18
174 175 2.164624 ACTGTATCGTCAAGAGGTCAGC 59.835 50.000 0.00 0.00 32.26 4.26
175 176 4.442375 AACTGTATCGTCAAGAGGTCAG 57.558 45.455 0.00 0.00 33.90 3.51
176 177 4.398358 CCTAACTGTATCGTCAAGAGGTCA 59.602 45.833 0.00 0.00 0.00 4.02
177 178 4.202030 CCCTAACTGTATCGTCAAGAGGTC 60.202 50.000 0.00 0.00 0.00 3.85
178 179 3.700038 CCCTAACTGTATCGTCAAGAGGT 59.300 47.826 0.00 0.00 0.00 3.85
179 180 3.700038 ACCCTAACTGTATCGTCAAGAGG 59.300 47.826 0.00 0.00 0.00 3.69
180 181 4.985538 ACCCTAACTGTATCGTCAAGAG 57.014 45.455 0.00 0.00 0.00 2.85
181 182 5.733620 AAACCCTAACTGTATCGTCAAGA 57.266 39.130 0.00 0.00 0.00 3.02
182 183 5.699458 ACAAAACCCTAACTGTATCGTCAAG 59.301 40.000 0.00 0.00 0.00 3.02
183 184 5.613329 ACAAAACCCTAACTGTATCGTCAA 58.387 37.500 0.00 0.00 0.00 3.18
184 185 5.217978 ACAAAACCCTAACTGTATCGTCA 57.782 39.130 0.00 0.00 0.00 4.35
185 186 6.870439 ACTAACAAAACCCTAACTGTATCGTC 59.130 38.462 0.00 0.00 0.00 4.20
186 187 6.762333 ACTAACAAAACCCTAACTGTATCGT 58.238 36.000 0.00 0.00 0.00 3.73
187 188 8.814235 CATACTAACAAAACCCTAACTGTATCG 58.186 37.037 0.00 0.00 0.00 2.92
188 189 9.106070 CCATACTAACAAAACCCTAACTGTATC 57.894 37.037 0.00 0.00 0.00 2.24
189 190 8.608598 ACCATACTAACAAAACCCTAACTGTAT 58.391 33.333 0.00 0.00 0.00 2.29
190 191 7.879160 CACCATACTAACAAAACCCTAACTGTA 59.121 37.037 0.00 0.00 0.00 2.74
191 192 6.713450 CACCATACTAACAAAACCCTAACTGT 59.287 38.462 0.00 0.00 0.00 3.55
192 193 6.938030 TCACCATACTAACAAAACCCTAACTG 59.062 38.462 0.00 0.00 0.00 3.16
193 194 7.081857 TCACCATACTAACAAAACCCTAACT 57.918 36.000 0.00 0.00 0.00 2.24
194 195 7.933215 ATCACCATACTAACAAAACCCTAAC 57.067 36.000 0.00 0.00 0.00 2.34
195 196 8.828751 ACTATCACCATACTAACAAAACCCTAA 58.171 33.333 0.00 0.00 0.00 2.69
196 197 8.262227 CACTATCACCATACTAACAAAACCCTA 58.738 37.037 0.00 0.00 0.00 3.53
197 198 7.110155 CACTATCACCATACTAACAAAACCCT 58.890 38.462 0.00 0.00 0.00 4.34
198 199 6.317893 CCACTATCACCATACTAACAAAACCC 59.682 42.308 0.00 0.00 0.00 4.11
199 200 6.183360 GCCACTATCACCATACTAACAAAACC 60.183 42.308 0.00 0.00 0.00 3.27
200 201 6.456449 CGCCACTATCACCATACTAACAAAAC 60.456 42.308 0.00 0.00 0.00 2.43
201 202 5.583061 CGCCACTATCACCATACTAACAAAA 59.417 40.000 0.00 0.00 0.00 2.44
202 203 5.105269 TCGCCACTATCACCATACTAACAAA 60.105 40.000 0.00 0.00 0.00 2.83
203 204 4.403113 TCGCCACTATCACCATACTAACAA 59.597 41.667 0.00 0.00 0.00 2.83
204 205 3.955551 TCGCCACTATCACCATACTAACA 59.044 43.478 0.00 0.00 0.00 2.41
205 206 4.037684 AGTCGCCACTATCACCATACTAAC 59.962 45.833 0.00 0.00 0.00 2.34
206 207 4.212716 AGTCGCCACTATCACCATACTAA 58.787 43.478 0.00 0.00 0.00 2.24
207 208 3.828921 AGTCGCCACTATCACCATACTA 58.171 45.455 0.00 0.00 0.00 1.82
208 209 2.667470 AGTCGCCACTATCACCATACT 58.333 47.619 0.00 0.00 0.00 2.12
209 210 3.454371 AAGTCGCCACTATCACCATAC 57.546 47.619 0.00 0.00 30.14 2.39
210 211 3.181469 GGAAAGTCGCCACTATCACCATA 60.181 47.826 0.00 0.00 30.14 2.74
211 212 2.420129 GGAAAGTCGCCACTATCACCAT 60.420 50.000 0.00 0.00 30.14 3.55
212 213 1.066430 GGAAAGTCGCCACTATCACCA 60.066 52.381 0.00 0.00 30.14 4.17
213 214 1.207329 AGGAAAGTCGCCACTATCACC 59.793 52.381 0.00 0.00 30.14 4.02
214 215 2.674796 AGGAAAGTCGCCACTATCAC 57.325 50.000 0.00 0.00 30.14 3.06
215 216 3.334691 CAAAGGAAAGTCGCCACTATCA 58.665 45.455 0.00 0.00 30.14 2.15
216 217 2.096013 GCAAAGGAAAGTCGCCACTATC 59.904 50.000 0.00 0.00 30.14 2.08
217 218 2.084546 GCAAAGGAAAGTCGCCACTAT 58.915 47.619 0.00 0.00 30.14 2.12
218 219 1.202710 TGCAAAGGAAAGTCGCCACTA 60.203 47.619 0.00 0.00 30.14 2.74
219 220 0.465460 TGCAAAGGAAAGTCGCCACT 60.465 50.000 0.00 0.00 0.00 4.00
220 221 0.040067 CTGCAAAGGAAAGTCGCCAC 60.040 55.000 0.00 0.00 0.00 5.01
221 222 0.465460 ACTGCAAAGGAAAGTCGCCA 60.465 50.000 0.00 0.00 0.00 5.69
222 223 1.519408 TACTGCAAAGGAAAGTCGCC 58.481 50.000 0.00 0.00 0.00 5.54
223 224 2.096013 GGATACTGCAAAGGAAAGTCGC 59.904 50.000 0.00 0.00 0.00 5.19
224 225 2.678336 GGGATACTGCAAAGGAAAGTCG 59.322 50.000 0.00 0.00 0.00 4.18
225 226 3.440522 GTGGGATACTGCAAAGGAAAGTC 59.559 47.826 0.00 0.00 0.00 3.01
226 227 3.074538 AGTGGGATACTGCAAAGGAAAGT 59.925 43.478 0.00 0.00 38.49 2.66
227 228 3.690460 AGTGGGATACTGCAAAGGAAAG 58.310 45.455 0.00 0.00 38.49 2.62
228 229 3.806949 AGTGGGATACTGCAAAGGAAA 57.193 42.857 0.00 0.00 38.49 3.13
229 230 3.686016 GAAGTGGGATACTGCAAAGGAA 58.314 45.455 0.00 0.00 40.26 3.36
230 231 2.354704 CGAAGTGGGATACTGCAAAGGA 60.355 50.000 0.00 0.00 40.26 3.36
231 232 2.009774 CGAAGTGGGATACTGCAAAGG 58.990 52.381 0.00 0.00 40.26 3.11
232 233 2.699954 ACGAAGTGGGATACTGCAAAG 58.300 47.619 0.00 0.00 42.51 2.77
233 234 2.851263 ACGAAGTGGGATACTGCAAA 57.149 45.000 0.00 0.00 42.51 3.68
234 235 2.851263 AACGAAGTGGGATACTGCAA 57.149 45.000 0.00 0.00 45.00 4.08
235 236 2.563620 TGTAACGAAGTGGGATACTGCA 59.436 45.455 0.00 0.00 45.00 4.41
236 237 3.241067 TGTAACGAAGTGGGATACTGC 57.759 47.619 0.00 0.00 45.00 4.40
237 238 4.570772 CCAATGTAACGAAGTGGGATACTG 59.429 45.833 0.00 0.00 45.00 2.74
238 239 4.224370 ACCAATGTAACGAAGTGGGATACT 59.776 41.667 0.00 0.00 45.00 2.12
239 240 4.331717 CACCAATGTAACGAAGTGGGATAC 59.668 45.833 0.00 0.00 45.00 2.24
240 241 4.020039 ACACCAATGTAACGAAGTGGGATA 60.020 41.667 0.00 0.00 45.00 2.59
241 242 3.244770 ACACCAATGTAACGAAGTGGGAT 60.245 43.478 0.00 0.00 45.00 3.85
242 243 2.105134 ACACCAATGTAACGAAGTGGGA 59.895 45.455 0.00 0.00 45.00 4.37
243 244 2.482721 GACACCAATGTAACGAAGTGGG 59.517 50.000 0.00 0.00 38.96 4.61
244 245 3.059188 GTGACACCAATGTAACGAAGTGG 60.059 47.826 0.00 0.00 38.96 4.00
245 246 3.059188 GGTGACACCAATGTAACGAAGTG 60.059 47.826 20.14 0.00 40.78 3.16
246 247 3.135994 GGTGACACCAATGTAACGAAGT 58.864 45.455 20.14 0.00 40.78 3.01
247 248 3.399330 AGGTGACACCAATGTAACGAAG 58.601 45.455 26.30 0.00 40.78 3.79
248 249 3.478857 AGGTGACACCAATGTAACGAA 57.521 42.857 26.30 0.00 40.78 3.85
249 250 3.181464 TGAAGGTGACACCAATGTAACGA 60.181 43.478 26.30 0.00 40.78 3.85
250 251 3.135225 TGAAGGTGACACCAATGTAACG 58.865 45.455 26.30 0.00 40.78 3.18
251 252 3.058224 GCTGAAGGTGACACCAATGTAAC 60.058 47.826 26.30 9.41 41.95 2.50
252 253 3.146066 GCTGAAGGTGACACCAATGTAA 58.854 45.455 26.30 5.03 41.95 2.41
253 254 2.778299 GCTGAAGGTGACACCAATGTA 58.222 47.619 26.30 7.08 41.95 2.29
254 255 1.609208 GCTGAAGGTGACACCAATGT 58.391 50.000 26.30 8.51 41.95 2.71
255 256 0.518636 CGCTGAAGGTGACACCAATG 59.481 55.000 26.30 13.65 41.95 2.82
256 257 0.606401 CCGCTGAAGGTGACACCAAT 60.606 55.000 26.30 14.62 41.95 3.16
257 258 1.227823 CCGCTGAAGGTGACACCAA 60.228 57.895 26.30 10.56 41.95 3.67
258 259 2.099652 CTCCGCTGAAGGTGACACCA 62.100 60.000 26.30 5.16 41.95 4.17
259 260 1.374758 CTCCGCTGAAGGTGACACC 60.375 63.158 17.43 17.43 38.99 4.16
260 261 2.029844 GCTCCGCTGAAGGTGACAC 61.030 63.158 0.00 0.00 0.00 3.67
261 262 1.758440 AAGCTCCGCTGAAGGTGACA 61.758 55.000 0.00 0.00 39.62 3.58
262 263 1.004440 AAGCTCCGCTGAAGGTGAC 60.004 57.895 0.00 0.00 39.62 3.67
263 264 1.188219 AGAAGCTCCGCTGAAGGTGA 61.188 55.000 0.00 0.00 39.62 4.02
264 265 0.321122 AAGAAGCTCCGCTGAAGGTG 60.321 55.000 0.00 0.00 39.62 4.00
265 266 0.398318 AAAGAAGCTCCGCTGAAGGT 59.602 50.000 0.00 0.00 39.62 3.50
266 267 1.528129 AAAAGAAGCTCCGCTGAAGG 58.472 50.000 0.00 0.00 39.62 3.46
267 268 3.589988 TCTAAAAGAAGCTCCGCTGAAG 58.410 45.455 0.00 0.00 39.62 3.02
268 269 3.589988 CTCTAAAAGAAGCTCCGCTGAA 58.410 45.455 0.00 0.00 39.62 3.02
269 270 2.093973 CCTCTAAAAGAAGCTCCGCTGA 60.094 50.000 0.00 0.00 39.62 4.26
270 271 2.275318 CCTCTAAAAGAAGCTCCGCTG 58.725 52.381 0.00 0.00 39.62 5.18
271 272 1.903183 ACCTCTAAAAGAAGCTCCGCT 59.097 47.619 0.00 0.00 42.56 5.52
272 273 2.388310 ACCTCTAAAAGAAGCTCCGC 57.612 50.000 0.00 0.00 0.00 5.54
273 274 5.294552 CCAATAACCTCTAAAAGAAGCTCCG 59.705 44.000 0.00 0.00 0.00 4.63
274 275 5.590663 CCCAATAACCTCTAAAAGAAGCTCC 59.409 44.000 0.00 0.00 0.00 4.70
275 276 6.415573 TCCCAATAACCTCTAAAAGAAGCTC 58.584 40.000 0.00 0.00 0.00 4.09
276 277 6.388619 TCCCAATAACCTCTAAAAGAAGCT 57.611 37.500 0.00 0.00 0.00 3.74
277 278 8.926092 ATATCCCAATAACCTCTAAAAGAAGC 57.074 34.615 0.00 0.00 0.00 3.86
279 280 9.640952 CCAATATCCCAATAACCTCTAAAAGAA 57.359 33.333 0.00 0.00 0.00 2.52
280 281 9.009675 TCCAATATCCCAATAACCTCTAAAAGA 57.990 33.333 0.00 0.00 0.00 2.52
281 282 9.813826 ATCCAATATCCCAATAACCTCTAAAAG 57.186 33.333 0.00 0.00 0.00 2.27
282 283 9.586732 CATCCAATATCCCAATAACCTCTAAAA 57.413 33.333 0.00 0.00 0.00 1.52
283 284 8.732854 ACATCCAATATCCCAATAACCTCTAAA 58.267 33.333 0.00 0.00 0.00 1.85
284 285 8.287904 ACATCCAATATCCCAATAACCTCTAA 57.712 34.615 0.00 0.00 0.00 2.10
285 286 7.888514 ACATCCAATATCCCAATAACCTCTA 57.111 36.000 0.00 0.00 0.00 2.43
286 287 6.786843 ACATCCAATATCCCAATAACCTCT 57.213 37.500 0.00 0.00 0.00 3.69
287 288 8.328758 TCATACATCCAATATCCCAATAACCTC 58.671 37.037 0.00 0.00 0.00 3.85
288 289 8.230848 TCATACATCCAATATCCCAATAACCT 57.769 34.615 0.00 0.00 0.00 3.50
289 290 8.877864 TTCATACATCCAATATCCCAATAACC 57.122 34.615 0.00 0.00 0.00 2.85
293 294 9.833179 AAAGATTCATACATCCAATATCCCAAT 57.167 29.630 0.00 0.00 0.00 3.16
294 295 9.300681 GAAAGATTCATACATCCAATATCCCAA 57.699 33.333 0.00 0.00 0.00 4.12
295 296 7.607607 CGAAAGATTCATACATCCAATATCCCA 59.392 37.037 0.00 0.00 0.00 4.37
296 297 7.066284 CCGAAAGATTCATACATCCAATATCCC 59.934 40.741 0.00 0.00 0.00 3.85
297 298 7.414540 GCCGAAAGATTCATACATCCAATATCC 60.415 40.741 0.00 0.00 0.00 2.59
298 299 7.467623 GCCGAAAGATTCATACATCCAATATC 58.532 38.462 0.00 0.00 0.00 1.63
299 300 6.092670 CGCCGAAAGATTCATACATCCAATAT 59.907 38.462 0.00 0.00 0.00 1.28
300 301 5.408299 CGCCGAAAGATTCATACATCCAATA 59.592 40.000 0.00 0.00 0.00 1.90
301 302 4.214119 CGCCGAAAGATTCATACATCCAAT 59.786 41.667 0.00 0.00 0.00 3.16
302 303 3.559655 CGCCGAAAGATTCATACATCCAA 59.440 43.478 0.00 0.00 0.00 3.53
303 304 3.130633 CGCCGAAAGATTCATACATCCA 58.869 45.455 0.00 0.00 0.00 3.41
304 305 3.131396 ACGCCGAAAGATTCATACATCC 58.869 45.455 0.00 0.00 0.00 3.51
305 306 4.795970 AACGCCGAAAGATTCATACATC 57.204 40.909 0.00 0.00 0.00 3.06
306 307 5.560966 AAAACGCCGAAAGATTCATACAT 57.439 34.783 0.00 0.00 0.00 2.29
307 308 4.434989 CGAAAACGCCGAAAGATTCATACA 60.435 41.667 0.00 0.00 0.00 2.29
308 309 4.019867 CGAAAACGCCGAAAGATTCATAC 58.980 43.478 0.00 0.00 0.00 2.39
309 310 3.484557 GCGAAAACGCCGAAAGATTCATA 60.485 43.478 3.16 0.00 0.00 2.15
310 311 2.727916 GCGAAAACGCCGAAAGATTCAT 60.728 45.455 3.16 0.00 0.00 2.57
311 312 1.399215 GCGAAAACGCCGAAAGATTCA 60.399 47.619 3.16 0.00 0.00 2.57
312 313 1.247845 GCGAAAACGCCGAAAGATTC 58.752 50.000 3.16 0.00 0.00 2.52
313 314 0.109919 GGCGAAAACGCCGAAAGATT 60.110 50.000 17.26 0.00 45.53 2.40
314 315 1.500396 GGCGAAAACGCCGAAAGAT 59.500 52.632 17.26 0.00 45.53 2.40
315 316 2.940561 GGCGAAAACGCCGAAAGA 59.059 55.556 17.26 0.00 45.53 2.52
340 341 1.066752 GTGGCCGCCGAAAGTTTTT 59.933 52.632 4.45 0.00 0.00 1.94
341 342 1.668101 TTGTGGCCGCCGAAAGTTTT 61.668 50.000 15.15 0.00 0.00 2.43
342 343 2.122167 TTGTGGCCGCCGAAAGTTT 61.122 52.632 15.15 0.00 0.00 2.66
343 344 2.517402 TTGTGGCCGCCGAAAGTT 60.517 55.556 15.15 0.00 0.00 2.66
344 345 3.284449 GTTGTGGCCGCCGAAAGT 61.284 61.111 15.15 0.00 0.00 2.66
345 346 2.458006 GAAGTTGTGGCCGCCGAAAG 62.458 60.000 15.15 0.00 0.00 2.62
346 347 2.517402 AAGTTGTGGCCGCCGAAA 60.517 55.556 15.15 0.00 0.00 3.46
347 348 2.975799 GAAGTTGTGGCCGCCGAA 60.976 61.111 15.15 0.00 0.00 4.30
348 349 3.758973 TTGAAGTTGTGGCCGCCGA 62.759 57.895 15.15 0.00 0.00 5.54
349 350 3.283684 TTGAAGTTGTGGCCGCCG 61.284 61.111 15.15 0.00 0.00 6.46
350 351 2.010582 TTGTTGAAGTTGTGGCCGCC 62.011 55.000 15.15 1.04 0.00 6.13
351 352 0.179124 TTTGTTGAAGTTGTGGCCGC 60.179 50.000 10.11 10.11 0.00 6.53
352 353 2.507339 ATTTGTTGAAGTTGTGGCCG 57.493 45.000 0.00 0.00 0.00 6.13
353 354 6.223120 AGAATAATTTGTTGAAGTTGTGGCC 58.777 36.000 0.00 0.00 0.00 5.36
354 355 7.437862 TGAAGAATAATTTGTTGAAGTTGTGGC 59.562 33.333 0.00 0.00 0.00 5.01
355 356 8.870160 TGAAGAATAATTTGTTGAAGTTGTGG 57.130 30.769 0.00 0.00 0.00 4.17
356 357 8.971321 CCTGAAGAATAATTTGTTGAAGTTGTG 58.029 33.333 0.00 0.00 0.00 3.33
357 358 8.143835 CCCTGAAGAATAATTTGTTGAAGTTGT 58.856 33.333 0.00 0.00 0.00 3.32
358 359 7.116805 GCCCTGAAGAATAATTTGTTGAAGTTG 59.883 37.037 0.00 0.00 0.00 3.16
359 360 7.154656 GCCCTGAAGAATAATTTGTTGAAGTT 58.845 34.615 0.00 0.00 0.00 2.66
360 361 6.570378 CGCCCTGAAGAATAATTTGTTGAAGT 60.570 38.462 0.00 0.00 0.00 3.01
361 362 5.801947 CGCCCTGAAGAATAATTTGTTGAAG 59.198 40.000 0.00 0.00 0.00 3.02
362 363 5.242838 ACGCCCTGAAGAATAATTTGTTGAA 59.757 36.000 0.00 0.00 0.00 2.69
363 364 4.764823 ACGCCCTGAAGAATAATTTGTTGA 59.235 37.500 0.00 0.00 0.00 3.18
364 365 5.059404 ACGCCCTGAAGAATAATTTGTTG 57.941 39.130 0.00 0.00 0.00 3.33
365 366 5.469479 CAACGCCCTGAAGAATAATTTGTT 58.531 37.500 0.00 0.00 0.00 2.83
366 367 4.082245 CCAACGCCCTGAAGAATAATTTGT 60.082 41.667 0.00 0.00 0.00 2.83
367 368 4.082245 ACCAACGCCCTGAAGAATAATTTG 60.082 41.667 0.00 0.00 0.00 2.32
368 369 4.086457 ACCAACGCCCTGAAGAATAATTT 58.914 39.130 0.00 0.00 0.00 1.82
369 370 3.694566 GACCAACGCCCTGAAGAATAATT 59.305 43.478 0.00 0.00 0.00 1.40
370 371 3.279434 GACCAACGCCCTGAAGAATAAT 58.721 45.455 0.00 0.00 0.00 1.28
371 372 2.617021 GGACCAACGCCCTGAAGAATAA 60.617 50.000 0.00 0.00 0.00 1.40
372 373 1.065709 GGACCAACGCCCTGAAGAATA 60.066 52.381 0.00 0.00 0.00 1.75
373 374 0.322546 GGACCAACGCCCTGAAGAAT 60.323 55.000 0.00 0.00 0.00 2.40
374 375 1.072505 GGACCAACGCCCTGAAGAA 59.927 57.895 0.00 0.00 0.00 2.52
375 376 2.747686 GGACCAACGCCCTGAAGA 59.252 61.111 0.00 0.00 0.00 2.87
376 377 2.742372 CGGACCAACGCCCTGAAG 60.742 66.667 0.00 0.00 0.00 3.02
377 378 4.323477 CCGGACCAACGCCCTGAA 62.323 66.667 0.00 0.00 0.00 3.02
381 382 3.980442 TTATGCCGGACCAACGCCC 62.980 63.158 5.05 0.00 0.00 6.13
382 383 2.041686 TTTATGCCGGACCAACGCC 61.042 57.895 5.05 0.00 0.00 5.68
383 384 1.135939 GTTTATGCCGGACCAACGC 59.864 57.895 5.05 0.00 0.00 4.84
384 385 1.293267 ACGTTTATGCCGGACCAACG 61.293 55.000 20.41 20.41 44.50 4.10
385 386 0.167251 CACGTTTATGCCGGACCAAC 59.833 55.000 5.05 0.35 0.00 3.77
386 387 0.956410 CCACGTTTATGCCGGACCAA 60.956 55.000 5.05 0.00 0.00 3.67
387 388 1.376166 CCACGTTTATGCCGGACCA 60.376 57.895 5.05 0.00 0.00 4.02
388 389 2.757056 GCCACGTTTATGCCGGACC 61.757 63.158 5.05 0.00 0.00 4.46
389 390 2.757056 GGCCACGTTTATGCCGGAC 61.757 63.158 5.05 0.00 35.08 4.79
390 391 2.437002 GGCCACGTTTATGCCGGA 60.437 61.111 5.05 0.00 35.08 5.14
393 394 1.065551 GATCAAGGCCACGTTTATGCC 59.934 52.381 5.01 6.99 45.70 4.40
394 395 1.742831 TGATCAAGGCCACGTTTATGC 59.257 47.619 5.01 0.00 0.00 3.14
395 396 4.637483 AATGATCAAGGCCACGTTTATG 57.363 40.909 5.01 0.00 0.00 1.90
396 397 5.179368 CGATAATGATCAAGGCCACGTTTAT 59.821 40.000 5.01 0.00 31.78 1.40
397 398 4.509970 CGATAATGATCAAGGCCACGTTTA 59.490 41.667 5.01 0.00 31.78 2.01
398 399 3.312421 CGATAATGATCAAGGCCACGTTT 59.688 43.478 5.01 0.00 31.78 3.60
399 400 2.872245 CGATAATGATCAAGGCCACGTT 59.128 45.455 5.01 1.22 31.78 3.99
400 401 2.102420 TCGATAATGATCAAGGCCACGT 59.898 45.455 5.01 0.00 31.78 4.49
401 402 2.476619 GTCGATAATGATCAAGGCCACG 59.523 50.000 5.01 1.94 31.78 4.94
402 403 2.808543 GGTCGATAATGATCAAGGCCAC 59.191 50.000 5.01 0.00 31.78 5.01
403 404 2.705658 AGGTCGATAATGATCAAGGCCA 59.294 45.455 5.01 0.00 31.78 5.36
404 405 3.007398 AGAGGTCGATAATGATCAAGGCC 59.993 47.826 0.00 0.00 31.78 5.19
405 406 4.241681 GAGAGGTCGATAATGATCAAGGC 58.758 47.826 0.00 0.00 31.78 4.35
406 407 4.526262 AGGAGAGGTCGATAATGATCAAGG 59.474 45.833 0.00 0.00 31.78 3.61
407 408 5.720371 AGGAGAGGTCGATAATGATCAAG 57.280 43.478 0.00 0.00 31.78 3.02
408 409 6.485830 AAAGGAGAGGTCGATAATGATCAA 57.514 37.500 0.00 0.00 31.78 2.57
409 410 6.485830 AAAAGGAGAGGTCGATAATGATCA 57.514 37.500 0.00 0.00 31.78 2.92
410 411 7.600752 CCTAAAAAGGAGAGGTCGATAATGATC 59.399 40.741 0.00 0.00 0.00 2.92
411 412 7.071321 ACCTAAAAAGGAGAGGTCGATAATGAT 59.929 37.037 0.00 0.00 39.46 2.45
412 413 6.383147 ACCTAAAAAGGAGAGGTCGATAATGA 59.617 38.462 0.00 0.00 39.46 2.57
413 414 6.583562 ACCTAAAAAGGAGAGGTCGATAATG 58.416 40.000 0.00 0.00 39.46 1.90
414 415 6.809976 ACCTAAAAAGGAGAGGTCGATAAT 57.190 37.500 0.00 0.00 39.46 1.28
448 449 9.938280 TCTTATAACAAAACTAGCAGTACATGT 57.062 29.630 2.69 2.69 0.00 3.21
481 482 9.851686 ATGATCAAACCAACAGTACACATATAT 57.148 29.630 0.00 0.00 0.00 0.86
482 483 9.679661 AATGATCAAACCAACAGTACACATATA 57.320 29.630 0.00 0.00 0.00 0.86
483 484 8.579850 AATGATCAAACCAACAGTACACATAT 57.420 30.769 0.00 0.00 0.00 1.78
484 485 7.994425 AATGATCAAACCAACAGTACACATA 57.006 32.000 0.00 0.00 0.00 2.29
485 486 6.899393 AATGATCAAACCAACAGTACACAT 57.101 33.333 0.00 0.00 0.00 3.21
486 487 7.220740 TCTAATGATCAAACCAACAGTACACA 58.779 34.615 0.00 0.00 0.00 3.72
487 488 7.387948 ACTCTAATGATCAAACCAACAGTACAC 59.612 37.037 0.00 0.00 0.00 2.90
488 489 7.450074 ACTCTAATGATCAAACCAACAGTACA 58.550 34.615 0.00 0.00 0.00 2.90
489 490 7.201444 CGACTCTAATGATCAAACCAACAGTAC 60.201 40.741 0.00 0.00 0.00 2.73
490 491 6.811665 CGACTCTAATGATCAAACCAACAGTA 59.188 38.462 0.00 0.00 0.00 2.74
491 492 5.639506 CGACTCTAATGATCAAACCAACAGT 59.360 40.000 0.00 0.00 0.00 3.55
492 493 5.063944 CCGACTCTAATGATCAAACCAACAG 59.936 44.000 0.00 0.00 0.00 3.16
493 494 4.935205 CCGACTCTAATGATCAAACCAACA 59.065 41.667 0.00 0.00 0.00 3.33
494 495 4.332819 CCCGACTCTAATGATCAAACCAAC 59.667 45.833 0.00 0.00 0.00 3.77
495 496 4.513442 CCCGACTCTAATGATCAAACCAA 58.487 43.478 0.00 0.00 0.00 3.67
496 497 3.681594 GCCCGACTCTAATGATCAAACCA 60.682 47.826 0.00 0.00 0.00 3.67
497 498 2.872858 GCCCGACTCTAATGATCAAACC 59.127 50.000 0.00 0.00 0.00 3.27
498 499 2.540101 CGCCCGACTCTAATGATCAAAC 59.460 50.000 0.00 0.00 0.00 2.93
499 500 2.167693 ACGCCCGACTCTAATGATCAAA 59.832 45.455 0.00 0.00 0.00 2.69
500 501 1.754803 ACGCCCGACTCTAATGATCAA 59.245 47.619 0.00 0.00 0.00 2.57
501 502 1.399714 ACGCCCGACTCTAATGATCA 58.600 50.000 0.00 0.00 0.00 2.92
502 503 2.510768 AACGCCCGACTCTAATGATC 57.489 50.000 0.00 0.00 0.00 2.92
503 504 2.981859 AAACGCCCGACTCTAATGAT 57.018 45.000 0.00 0.00 0.00 2.45
504 505 2.232941 AGAAAACGCCCGACTCTAATGA 59.767 45.455 0.00 0.00 0.00 2.57
505 506 2.618053 AGAAAACGCCCGACTCTAATG 58.382 47.619 0.00 0.00 0.00 1.90
506 507 4.460948 TTAGAAAACGCCCGACTCTAAT 57.539 40.909 0.00 0.00 0.00 1.73
507 508 3.940209 TTAGAAAACGCCCGACTCTAA 57.060 42.857 0.00 1.58 0.00 2.10
508 509 3.940209 TTTAGAAAACGCCCGACTCTA 57.060 42.857 0.00 0.00 0.00 2.43
509 510 2.825861 TTTAGAAAACGCCCGACTCT 57.174 45.000 0.00 0.00 0.00 3.24
510 511 3.434299 TCATTTTAGAAAACGCCCGACTC 59.566 43.478 0.00 0.00 0.00 3.36
511 512 3.404899 TCATTTTAGAAAACGCCCGACT 58.595 40.909 0.00 0.00 0.00 4.18
512 513 3.817148 TCATTTTAGAAAACGCCCGAC 57.183 42.857 0.00 0.00 0.00 4.79
513 514 4.832590 TTTCATTTTAGAAAACGCCCGA 57.167 36.364 0.00 0.00 34.77 5.14
514 515 6.804783 ACTATTTTCATTTTAGAAAACGCCCG 59.195 34.615 4.23 0.00 46.63 6.13
515 516 9.285770 CTACTATTTTCATTTTAGAAAACGCCC 57.714 33.333 4.23 0.00 46.63 6.13
516 517 9.836076 ACTACTATTTTCATTTTAGAAAACGCC 57.164 29.630 4.23 0.00 46.63 5.68
535 536 8.844244 CGACAGGTAAAATGGTACTACTACTAT 58.156 37.037 0.00 0.00 0.00 2.12
536 537 8.046708 TCGACAGGTAAAATGGTACTACTACTA 58.953 37.037 0.00 0.00 0.00 1.82
537 538 6.886459 TCGACAGGTAAAATGGTACTACTACT 59.114 38.462 0.00 0.00 0.00 2.57
538 539 7.088589 TCGACAGGTAAAATGGTACTACTAC 57.911 40.000 0.00 0.00 0.00 2.73
539 540 7.701539 TTCGACAGGTAAAATGGTACTACTA 57.298 36.000 0.00 0.00 0.00 1.82
540 541 6.594788 TTCGACAGGTAAAATGGTACTACT 57.405 37.500 0.00 0.00 0.00 2.57
541 542 7.009907 GTGATTCGACAGGTAAAATGGTACTAC 59.990 40.741 0.00 0.00 0.00 2.73
542 543 7.037438 GTGATTCGACAGGTAAAATGGTACTA 58.963 38.462 0.00 0.00 0.00 1.82
543 544 5.873164 GTGATTCGACAGGTAAAATGGTACT 59.127 40.000 0.00 0.00 0.00 2.73
544 545 5.873164 AGTGATTCGACAGGTAAAATGGTAC 59.127 40.000 0.00 0.00 0.00 3.34
545 546 6.045072 AGTGATTCGACAGGTAAAATGGTA 57.955 37.500 0.00 0.00 0.00 3.25
546 547 4.906618 AGTGATTCGACAGGTAAAATGGT 58.093 39.130 0.00 0.00 0.00 3.55
600 602 6.072199 AGGGATGATGAGGATTTATTAGCC 57.928 41.667 0.00 0.00 0.00 3.93
645 647 3.734231 CCACCGTATCTGTAAATGCTACG 59.266 47.826 0.00 0.00 36.00 3.51
666 668 2.709475 CGCAGTAAATCCAGCGCC 59.291 61.111 2.29 0.00 43.80 6.53
700 702 1.204467 GCTCACCTCAAGTCCTCTCAG 59.796 57.143 0.00 0.00 0.00 3.35
915 929 3.368501 TGGGGAGGAGGAGGGAGG 61.369 72.222 0.00 0.00 0.00 4.30
921 935 2.540910 AGAGGGTGGGGAGGAGGA 60.541 66.667 0.00 0.00 0.00 3.71
953 971 2.503546 GCTCCCCTACTCAGCAGC 59.496 66.667 0.00 0.00 33.06 5.25
1109 1141 1.332065 GCGCATAGGAGAAAGAAAGGC 59.668 52.381 0.30 0.00 0.00 4.35
1116 1148 2.473816 CTGAATCGCGCATAGGAGAAA 58.526 47.619 8.75 0.00 0.00 2.52
1117 1149 1.869754 GCTGAATCGCGCATAGGAGAA 60.870 52.381 8.75 0.00 0.00 2.87
1118 1150 0.319040 GCTGAATCGCGCATAGGAGA 60.319 55.000 8.75 0.00 0.00 3.71
1119 1151 0.319383 AGCTGAATCGCGCATAGGAG 60.319 55.000 8.75 0.00 34.40 3.69
1149 1181 5.604650 TGGAAAGGAAAAGGGAGCATTTTTA 59.395 36.000 0.00 0.00 30.22 1.52
1195 1228 7.604545 GCAGGAAGAAGAACAGTAATAAAGACT 59.395 37.037 0.00 0.00 0.00 3.24
1196 1229 7.604545 AGCAGGAAGAAGAACAGTAATAAAGAC 59.395 37.037 0.00 0.00 0.00 3.01
1197 1230 7.604164 CAGCAGGAAGAAGAACAGTAATAAAGA 59.396 37.037 0.00 0.00 0.00 2.52
1198 1231 7.625185 GCAGCAGGAAGAAGAACAGTAATAAAG 60.625 40.741 0.00 0.00 0.00 1.85
1199 1232 6.149474 GCAGCAGGAAGAAGAACAGTAATAAA 59.851 38.462 0.00 0.00 0.00 1.40
1200 1233 5.643777 GCAGCAGGAAGAAGAACAGTAATAA 59.356 40.000 0.00 0.00 0.00 1.40
1201 1234 5.178797 GCAGCAGGAAGAAGAACAGTAATA 58.821 41.667 0.00 0.00 0.00 0.98
1202 1235 4.006319 GCAGCAGGAAGAAGAACAGTAAT 58.994 43.478 0.00 0.00 0.00 1.89
1266 1299 3.192922 CACGGGACCGCGGATTTC 61.193 66.667 35.90 19.68 44.19 2.17
1295 1328 1.396653 CAAATCAGATCCCAGGCACC 58.603 55.000 0.00 0.00 0.00 5.01
1300 1333 3.835810 CCCCCAAATCAGATCCCAG 57.164 57.895 0.00 0.00 0.00 4.45
1319 1352 2.200170 ATTCGGTCCAAAAGCAGCGC 62.200 55.000 0.00 0.00 33.55 5.92
1320 1353 0.179189 GATTCGGTCCAAAAGCAGCG 60.179 55.000 0.00 0.00 34.83 5.18
1321 1354 0.171231 GGATTCGGTCCAAAAGCAGC 59.829 55.000 3.29 0.00 46.96 5.25
1367 1409 3.344215 GCAGATCTCATGCCGCCG 61.344 66.667 0.00 0.00 37.73 6.46
1392 1434 0.107848 ATCACGTCCCGAATTGGTCC 60.108 55.000 0.00 0.00 35.15 4.46
1402 1444 4.408821 TGCTGGCCATCACGTCCC 62.409 66.667 5.51 0.00 0.00 4.46
1403 1445 3.127533 GTGCTGGCCATCACGTCC 61.128 66.667 22.96 1.47 0.00 4.79
1404 1446 1.709147 GATGTGCTGGCCATCACGTC 61.709 60.000 34.27 34.27 40.59 4.34
1405 1447 1.746615 GATGTGCTGGCCATCACGT 60.747 57.895 29.71 29.71 38.82 4.49
1406 1448 1.712018 CTGATGTGCTGGCCATCACG 61.712 60.000 29.21 14.85 42.73 4.35
1407 1449 2.001361 GCTGATGTGCTGGCCATCAC 62.001 60.000 28.81 28.81 42.73 3.06
1408 1450 1.751544 GCTGATGTGCTGGCCATCA 60.752 57.895 5.51 5.14 44.75 3.07
1409 1451 1.453379 AGCTGATGTGCTGGCCATC 60.453 57.895 5.51 1.26 42.33 3.51
1410 1452 2.681591 AGCTGATGTGCTGGCCAT 59.318 55.556 5.51 0.00 42.33 4.40
1416 1458 0.671781 GGACGAACAGCTGATGTGCT 60.672 55.000 23.35 0.00 43.00 4.40
1417 1459 1.639298 GGGACGAACAGCTGATGTGC 61.639 60.000 23.35 18.90 43.00 4.57
1418 1460 2.460330 GGGACGAACAGCTGATGTG 58.540 57.895 23.35 9.50 43.00 3.21
1437 1479 1.135731 CCTATCGCGGCGAGATCTC 59.864 63.158 28.67 13.05 39.91 2.75
1446 1488 2.093783 GCGGAATAAAATCCTATCGCGG 59.906 50.000 6.13 0.00 37.34 6.46
1447 1489 3.369835 GCGGAATAAAATCCTATCGCG 57.630 47.619 0.00 0.00 37.34 5.87
1448 1490 2.474032 GCGCGGAATAAAATCCTATCGC 60.474 50.000 8.83 0.00 40.39 4.58
1470 1515 0.958822 ACCAAAAGTCGGAACATGCC 59.041 50.000 0.00 0.00 0.00 4.40
1486 1531 3.625897 CTGGCCTGTCGGTGACCA 61.626 66.667 3.32 0.00 0.00 4.02
1496 1541 2.192443 CATGCTCTCCCTGGCCTG 59.808 66.667 3.32 2.54 0.00 4.85
1497 1542 2.285969 ACATGCTCTCCCTGGCCT 60.286 61.111 3.32 0.00 0.00 5.19
1498 1543 2.191641 GACATGCTCTCCCTGGCC 59.808 66.667 0.00 0.00 0.00 5.36
1499 1544 1.153208 CAGACATGCTCTCCCTGGC 60.153 63.158 0.00 0.00 0.00 4.85
1500 1545 0.177604 GTCAGACATGCTCTCCCTGG 59.822 60.000 0.00 0.00 0.00 4.45
1596 1648 4.223923 AGACAATTTAGACTCCCAGTCCAG 59.776 45.833 0.00 0.00 46.18 3.86
1605 1657 4.992381 ACGCAACAGACAATTTAGACTC 57.008 40.909 0.00 0.00 0.00 3.36
1633 1685 1.900486 AGTGGGCTGTTGGTAGAGTAC 59.100 52.381 0.00 0.00 0.00 2.73
1657 1709 7.730486 GCTAAAATTACAGAGCTATGGAACAGC 60.730 40.741 8.48 11.06 39.41 4.40
1729 1782 2.426024 CAGCACTCCCTGAATTTCCATG 59.574 50.000 0.00 0.00 34.77 3.66
1758 1820 0.823769 CGACGGGATCATCCTCCAGA 60.824 60.000 2.93 0.00 36.57 3.86
1917 1979 2.506472 GCCTCCTCCGGGTTCATC 59.494 66.667 0.00 0.00 0.00 2.92
1980 2042 2.275418 GGCAACGGATGACCCCAT 59.725 61.111 0.00 0.00 35.29 4.00
1986 2048 2.091541 GATTTGAAGGGCAACGGATGA 58.908 47.619 0.00 0.00 35.91 2.92
2073 2135 2.002586 ACGAAGAAATGATCAGCACCG 58.997 47.619 0.09 2.77 0.00 4.94
2181 2243 9.490083 ACTCTTATATTAGTTTACACAGGGAGT 57.510 33.333 0.00 0.00 0.00 3.85
2182 2244 9.751542 CACTCTTATATTAGTTTACACAGGGAG 57.248 37.037 0.00 0.00 0.00 4.30
2183 2245 9.263446 ACACTCTTATATTAGTTTACACAGGGA 57.737 33.333 0.00 0.00 0.00 4.20
2184 2246 9.886132 AACACTCTTATATTAGTTTACACAGGG 57.114 33.333 0.00 0.00 0.00 4.45
2218 2280 9.654663 AAGAGCGTTTAGATCACTATTTTAGTT 57.345 29.630 0.00 0.00 37.82 2.24
2232 2294 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
2233 2295 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
2234 2296 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
2235 2297 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2236 2298 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
2237 2299 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2238 2300 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2239 2301 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2240 2302 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2241 2303 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2242 2304 8.518702 GGTACTCCCTCCGTAAACTAATATAAG 58.481 40.741 0.00 0.00 0.00 1.73
2243 2305 8.004215 TGGTACTCCCTCCGTAAACTAATATAA 58.996 37.037 0.00 0.00 0.00 0.98
2244 2306 7.448469 GTGGTACTCCCTCCGTAAACTAATATA 59.552 40.741 0.00 0.00 0.00 0.86
2245 2307 6.266330 GTGGTACTCCCTCCGTAAACTAATAT 59.734 42.308 0.00 0.00 0.00 1.28
2246 2308 5.594317 GTGGTACTCCCTCCGTAAACTAATA 59.406 44.000 0.00 0.00 0.00 0.98
2247 2309 4.403752 GTGGTACTCCCTCCGTAAACTAAT 59.596 45.833 0.00 0.00 0.00 1.73
2248 2310 3.763897 GTGGTACTCCCTCCGTAAACTAA 59.236 47.826 0.00 0.00 0.00 2.24
2249 2311 3.010584 AGTGGTACTCCCTCCGTAAACTA 59.989 47.826 0.00 0.00 0.00 2.24
2250 2312 2.174360 GTGGTACTCCCTCCGTAAACT 58.826 52.381 0.00 0.00 0.00 2.66
2251 2313 2.094338 CAGTGGTACTCCCTCCGTAAAC 60.094 54.545 0.00 0.00 0.00 2.01
2252 2314 2.173519 CAGTGGTACTCCCTCCGTAAA 58.826 52.381 0.00 0.00 0.00 2.01
2253 2315 1.355381 TCAGTGGTACTCCCTCCGTAA 59.645 52.381 0.00 0.00 0.00 3.18
2254 2316 0.994247 TCAGTGGTACTCCCTCCGTA 59.006 55.000 0.00 0.00 0.00 4.02
2255 2317 0.113776 TTCAGTGGTACTCCCTCCGT 59.886 55.000 0.00 0.00 0.00 4.69
2256 2318 1.067071 GTTTCAGTGGTACTCCCTCCG 60.067 57.143 0.00 0.00 0.00 4.63
2257 2319 1.975680 TGTTTCAGTGGTACTCCCTCC 59.024 52.381 0.00 0.00 0.00 4.30
2258 2320 3.600388 CATGTTTCAGTGGTACTCCCTC 58.400 50.000 0.00 0.00 0.00 4.30
2259 2321 2.305927 CCATGTTTCAGTGGTACTCCCT 59.694 50.000 0.00 0.00 0.00 4.20
2260 2322 2.304761 TCCATGTTTCAGTGGTACTCCC 59.695 50.000 0.00 0.00 36.84 4.30
2261 2323 3.695830 TCCATGTTTCAGTGGTACTCC 57.304 47.619 0.00 0.00 36.84 3.85
2262 2324 4.396166 CCATTCCATGTTTCAGTGGTACTC 59.604 45.833 0.00 0.00 36.84 2.59
2263 2325 4.042809 TCCATTCCATGTTTCAGTGGTACT 59.957 41.667 0.00 0.00 36.84 2.73
2264 2326 4.331968 TCCATTCCATGTTTCAGTGGTAC 58.668 43.478 0.00 0.00 36.84 3.34
2288 2350 5.605327 CGTGTGTATAAGTGTGCAAAGTAC 58.395 41.667 0.00 0.00 0.00 2.73
2305 2368 0.179166 CAAGTGTGCAAAGCGTGTGT 60.179 50.000 0.00 0.00 0.00 3.72
2306 2369 0.179166 ACAAGTGTGCAAAGCGTGTG 60.179 50.000 0.00 0.00 0.00 3.82
2308 2371 1.330521 AGTACAAGTGTGCAAAGCGTG 59.669 47.619 2.34 0.00 32.87 5.34
2311 2374 2.875933 TGGTAGTACAAGTGTGCAAAGC 59.124 45.455 2.06 0.81 32.87 3.51
2320 2383 3.638160 TCAAAGTCCGTGGTAGTACAAGT 59.362 43.478 2.06 0.00 0.00 3.16
2322 2385 4.281435 TCATCAAAGTCCGTGGTAGTACAA 59.719 41.667 2.06 0.00 0.00 2.41
2626 2702 4.572389 CCACGGAAATAGACAAAGATGGAG 59.428 45.833 0.00 0.00 0.00 3.86
2668 2744 0.999712 AACCACCCTCGGGATCATTT 59.000 50.000 9.43 0.00 38.96 2.32
2874 2994 3.309296 CATGTCCTCATAGTAGGTGGGT 58.691 50.000 3.29 0.00 37.91 4.51
2886 3006 2.743538 GCACGCTGCATGTCCTCA 60.744 61.111 0.00 0.00 44.26 3.86
2955 3075 4.308458 CCGAACACCACGGCCTCA 62.308 66.667 0.00 0.00 43.74 3.86
3066 3186 1.150536 GGTGTCAAGCTTGGGGACA 59.849 57.895 25.73 19.27 39.09 4.02
3339 3465 1.276138 TGAACATCGTCAGCTCATGGT 59.724 47.619 0.00 0.00 0.00 3.55
3351 3477 6.312180 TCTCATTTCATTCTGACTGAACATCG 59.688 38.462 9.63 1.46 37.52 3.84
3394 3528 0.897621 GTAATGGCTTGGCTTGGCTT 59.102 50.000 5.64 0.00 0.00 4.35
3450 3596 4.799564 TCACAACAAAAAGAAGCAAGGT 57.200 36.364 0.00 0.00 0.00 3.50
3451 3597 5.350633 TCATCACAACAAAAAGAAGCAAGG 58.649 37.500 0.00 0.00 0.00 3.61
3452 3598 6.477688 ACATCATCACAACAAAAAGAAGCAAG 59.522 34.615 0.00 0.00 0.00 4.01
3498 3644 2.894919 GGAACCATGCCATGCCAC 59.105 61.111 0.00 0.00 0.00 5.01
3588 3736 6.828273 AGCAGTATAATACAAAGGTCATGCAA 59.172 34.615 0.00 0.00 0.00 4.08
3615 3763 3.245797 CCATTACAGATCGGCGTCTATG 58.754 50.000 6.85 9.61 0.00 2.23
3680 3831 2.889170 TCTCTCTGCCTCTGTACACT 57.111 50.000 0.00 0.00 0.00 3.55
3720 3877 2.422597 TCAGACAATACAAACGGCAGG 58.577 47.619 0.00 0.00 0.00 4.85
3737 3894 2.277969 CAGATACTGTGCTGCCTTCAG 58.722 52.381 12.55 12.55 43.16 3.02
3756 3913 4.015872 GGTATCAACCAAAGACCAGACA 57.984 45.455 0.00 0.00 45.98 3.41
3776 3933 5.942872 GTGGTGTCACATAAAAGATCAAGG 58.057 41.667 5.12 0.00 43.13 3.61
3813 3970 2.522185 AGCCAAGCACATTGATGTTCT 58.478 42.857 0.00 0.00 41.83 3.01
3826 3983 4.906065 TCATCATCAATGTAAGCCAAGC 57.094 40.909 0.00 0.00 36.68 4.01
3829 3986 4.858850 ACCTTCATCATCAATGTAAGCCA 58.141 39.130 0.00 0.00 36.68 4.75
3830 3987 6.291377 TCTACCTTCATCATCAATGTAAGCC 58.709 40.000 0.00 0.00 36.68 4.35
3836 3994 9.205719 CACTCTAATCTACCTTCATCATCAATG 57.794 37.037 0.00 0.00 36.65 2.82
3890 4048 1.682684 CTGGAGCCGTCAGGTACCT 60.683 63.158 9.21 9.21 40.50 3.08
3893 4051 2.037367 AGCTGGAGCCGTCAGGTA 59.963 61.111 0.00 0.00 40.62 3.08
3913 4071 4.254709 AACGTCCAGCCTGCTGCA 62.255 61.111 13.63 0.88 44.83 4.41
3985 4143 4.886247 TTATACGCTTGCCCATGTTAAC 57.114 40.909 0.00 0.00 0.00 2.01
3995 4153 2.014128 TCCAGGCTTTTATACGCTTGC 58.986 47.619 0.00 0.00 32.58 4.01
4010 4168 2.026822 ACAAATCTGTAGGTGCTCCAGG 60.027 50.000 7.70 0.00 32.54 4.45
4013 4171 3.674997 TGAACAAATCTGTAGGTGCTCC 58.325 45.455 0.00 0.00 33.45 4.70
4014 4172 5.163713 GGATTGAACAAATCTGTAGGTGCTC 60.164 44.000 0.00 0.00 43.71 4.26
4068 4227 0.679505 AGTGTACAGGAGCAAAGCGA 59.320 50.000 0.00 0.00 0.00 4.93
4078 4237 1.255667 ACCCGGCACTAGTGTACAGG 61.256 60.000 23.44 19.10 0.00 4.00
4080 4239 0.319083 CAACCCGGCACTAGTGTACA 59.681 55.000 23.44 0.00 0.00 2.90
4082 4241 1.546589 CCCAACCCGGCACTAGTGTA 61.547 60.000 23.44 0.00 0.00 2.90
4144 4326 5.278315 GCTCAAATTCTGTTAACCGTCCTTT 60.278 40.000 2.48 0.00 0.00 3.11
4145 4327 4.215613 GCTCAAATTCTGTTAACCGTCCTT 59.784 41.667 2.48 0.00 0.00 3.36
4146 4328 3.751698 GCTCAAATTCTGTTAACCGTCCT 59.248 43.478 2.48 0.00 0.00 3.85
4148 4330 3.119955 GGGCTCAAATTCTGTTAACCGTC 60.120 47.826 2.48 0.00 0.00 4.79
4168 4350 1.270625 TGCTCGTAACTGAGGTTTGGG 60.271 52.381 0.00 0.00 36.47 4.12
4174 4356 2.148916 TGTGTTGCTCGTAACTGAGG 57.851 50.000 0.00 0.00 36.47 3.86
4178 4360 0.580104 GCGTTGTGTTGCTCGTAACT 59.420 50.000 0.00 0.00 0.00 2.24
4183 4365 2.616330 ATGGGCGTTGTGTTGCTCG 61.616 57.895 0.00 0.00 33.06 5.03
4185 4367 3.041701 CATGGGCGTTGTGTTGCT 58.958 55.556 0.00 0.00 0.00 3.91
4196 4378 0.820891 AATCACCGATCAGCATGGGC 60.821 55.000 0.00 0.00 41.61 5.36
4198 4380 5.240891 ACTTATAATCACCGATCAGCATGG 58.759 41.667 0.00 0.00 36.16 3.66
4200 4382 7.807977 AAAACTTATAATCACCGATCAGCAT 57.192 32.000 0.00 0.00 0.00 3.79
4232 4414 7.274686 CCCGCTTTGTATTTTAAAATCGATTGT 59.725 33.333 16.56 8.99 0.00 2.71
4233 4415 7.253950 CCCCGCTTTGTATTTTAAAATCGATTG 60.254 37.037 16.56 7.52 0.00 2.67
4236 4418 5.415077 TCCCCGCTTTGTATTTTAAAATCGA 59.585 36.000 16.56 6.49 0.00 3.59
4238 4420 7.381408 GCTATCCCCGCTTTGTATTTTAAAATC 59.619 37.037 16.56 9.41 0.00 2.17
4239 4421 7.069455 AGCTATCCCCGCTTTGTATTTTAAAAT 59.931 33.333 17.18 17.18 32.98 1.82
4248 4431 1.412710 CTGAGCTATCCCCGCTTTGTA 59.587 52.381 0.00 0.00 37.96 2.41
4250 4433 0.179000 ACTGAGCTATCCCCGCTTTG 59.821 55.000 0.00 0.00 37.96 2.77
4251 4434 0.912486 AACTGAGCTATCCCCGCTTT 59.088 50.000 0.00 0.00 37.96 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.