Multiple sequence alignment - TraesCS3A01G437800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G437800 chr3A 100.000 5366 0 0 1 5366 681384823 681390188 0.000000e+00 9910.0
1 TraesCS3A01G437800 chr3A 92.500 40 3 0 4785 4824 35459314 35459275 2.090000e-04 58.4
2 TraesCS3A01G437800 chr3A 75.172 145 22 10 4785 4923 111650845 111650981 7.510000e-04 56.5
3 TraesCS3A01G437800 chr3B 93.402 4001 136 50 694 4609 720252195 720256152 0.000000e+00 5808.0
4 TraesCS3A01G437800 chr3B 91.045 603 46 5 1 598 720251578 720252177 0.000000e+00 808.0
5 TraesCS3A01G437800 chr3B 78.797 316 53 6 4891 5203 720256400 720256704 3.280000e-47 200.0
6 TraesCS3A01G437800 chr3B 89.691 97 10 0 1 97 743140028 743140124 2.030000e-24 124.0
7 TraesCS3A01G437800 chr3D 95.484 2923 88 18 1681 4580 544412799 544415700 0.000000e+00 4626.0
8 TraesCS3A01G437800 chr3D 89.567 1016 57 28 666 1647 544411802 544412802 0.000000e+00 1243.0
9 TraesCS3A01G437800 chr3D 91.546 414 23 8 1 409 544411398 544411804 1.310000e-155 560.0
10 TraesCS3A01G437800 chr3D 89.583 96 10 0 1 96 19545653 19545558 7.300000e-24 122.0
11 TraesCS3A01G437800 chr1B 86.822 774 71 12 1132 1904 1891878 1891135 0.000000e+00 835.0
12 TraesCS3A01G437800 chr1B 94.318 88 5 0 2560 2647 1882539 1882452 9.370000e-28 135.0
13 TraesCS3A01G437800 chr7B 86.528 527 51 8 1377 1903 728084736 728085242 3.630000e-156 562.0
14 TraesCS3A01G437800 chr7B 88.491 391 26 7 1229 1619 709128291 709128662 6.340000e-124 455.0
15 TraesCS3A01G437800 chr7B 88.144 388 27 8 1232 1619 613376024 613375656 1.370000e-120 444.0
16 TraesCS3A01G437800 chr7B 93.860 228 14 0 2420 2647 728085238 728085465 1.430000e-90 344.0
17 TraesCS3A01G437800 chr7B 87.747 253 22 3 1384 1636 718399559 718399802 2.450000e-73 287.0
18 TraesCS3A01G437800 chr7B 80.970 268 47 4 406 670 481536398 481536664 5.450000e-50 209.0
19 TraesCS3A01G437800 chr7B 94.872 117 5 1 1132 1248 728084624 728084739 1.190000e-41 182.0
20 TraesCS3A01G437800 chr7B 94.231 52 3 0 1669 1720 709129406 709129457 4.460000e-11 80.5
21 TraesCS3A01G437800 chr7B 90.909 55 5 0 1669 1723 613374912 613374858 2.070000e-09 75.0
22 TraesCS3A01G437800 chr4B 89.916 357 27 3 1263 1619 10622590 10622243 8.200000e-123 451.0
23 TraesCS3A01G437800 chr4B 89.046 283 19 7 1978 2249 526962680 526962399 1.850000e-89 340.0
24 TraesCS3A01G437800 chr4B 83.209 268 37 7 404 667 541128187 541127924 6.950000e-59 239.0
25 TraesCS3A01G437800 chr4B 80.597 268 48 4 406 671 554985012 554984747 2.530000e-48 204.0
26 TraesCS3A01G437800 chr4B 89.691 97 10 0 1 97 122314204 122314108 2.030000e-24 124.0
27 TraesCS3A01G437800 chr6B 88.498 313 23 6 1304 1614 160387952 160388253 3.050000e-97 366.0
28 TraesCS3A01G437800 chr6B 92.727 55 4 0 1669 1723 387719376 387719322 4.460000e-11 80.5
29 TraesCS3A01G437800 chr6A 86.290 248 31 3 407 653 584518738 584518493 3.190000e-67 267.0
30 TraesCS3A01G437800 chr2B 84.906 265 36 3 403 667 707966978 707966718 1.150000e-66 265.0
31 TraesCS3A01G437800 chr2B 81.111 270 46 5 406 672 776596581 776596314 1.510000e-50 211.0
32 TraesCS3A01G437800 chr2B 90.909 55 5 0 1669 1723 29005386 29005332 2.070000e-09 75.0
33 TraesCS3A01G437800 chr4D 85.830 247 32 3 407 653 335353282 335353039 5.330000e-65 259.0
34 TraesCS3A01G437800 chr7D 81.369 263 46 3 403 664 263668936 263669196 1.510000e-50 211.0
35 TraesCS3A01G437800 chr4A 79.098 244 38 11 1 242 424362232 424362464 7.200000e-34 156.0
36 TraesCS3A01G437800 chr4A 80.723 83 8 3 4787 4869 709172835 709172761 2.090000e-04 58.4
37 TraesCS3A01G437800 chr1A 85.211 142 17 4 531 670 37619240 37619379 5.600000e-30 143.0
38 TraesCS3A01G437800 chr1A 95.122 41 1 1 4785 4825 389140509 389140548 4.490000e-06 63.9
39 TraesCS3A01G437800 chr5A 77.778 216 41 6 464 675 280759989 280759777 5.640000e-25 126.0
40 TraesCS3A01G437800 chr5A 79.874 159 23 8 1 153 17176518 17176673 2.040000e-19 108.0
41 TraesCS3A01G437800 chr5A 79.874 159 23 8 1 153 17200166 17200321 2.040000e-19 108.0
42 TraesCS3A01G437800 chr2D 89.691 97 10 0 1 97 607961991 607962087 2.030000e-24 124.0
43 TraesCS3A01G437800 chr5B 92.593 54 2 2 5116 5168 660655737 660655685 5.760000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G437800 chr3A 681384823 681390188 5365 False 9910.000000 9910 100.000000 1 5366 1 chr3A.!!$F2 5365
1 TraesCS3A01G437800 chr3B 720251578 720256704 5126 False 2272.000000 5808 87.748000 1 5203 3 chr3B.!!$F2 5202
2 TraesCS3A01G437800 chr3D 544411398 544415700 4302 False 2143.000000 4626 92.199000 1 4580 3 chr3D.!!$F1 4579
3 TraesCS3A01G437800 chr1B 1891135 1891878 743 True 835.000000 835 86.822000 1132 1904 1 chr1B.!!$R2 772
4 TraesCS3A01G437800 chr7B 728084624 728085465 841 False 362.666667 562 91.753333 1132 2647 3 chr7B.!!$F4 1515
5 TraesCS3A01G437800 chr7B 709128291 709129457 1166 False 267.750000 455 91.361000 1229 1720 2 chr7B.!!$F3 491
6 TraesCS3A01G437800 chr7B 613374858 613376024 1166 True 259.500000 444 89.526500 1232 1723 2 chr7B.!!$R1 491

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
757 763 0.762418 TTCGTTTCTCCTTGGCCTCA 59.238 50.0 3.32 0.00 0.00 3.86 F
999 1052 0.108472 CAAGCACATCGGAGAGAGCA 60.108 55.0 5.70 0.00 43.63 4.26 F
1974 2749 0.249073 CGTCGAGGAGCTAACCATGG 60.249 60.0 11.19 11.19 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2055 2864 0.460987 CTTCCAGATCGTCCCTGCAC 60.461 60.000 0.00 0.00 0.00 4.57 R
2862 3671 1.349627 GAACGCCAGCGACATGATG 59.650 57.895 20.32 0.00 42.83 3.07 R
4367 5176 1.934956 CAGACGAACGCCGATCGAG 60.935 63.158 23.39 12.76 42.76 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 3.397482 CCAGGCTCTGCATAACTATGAC 58.603 50.000 0.77 0.00 35.75 3.06
119 120 7.853929 ACACATAAACACAAAACGATAACACTC 59.146 33.333 0.00 0.00 0.00 3.51
127 128 6.964370 CACAAAACGATAACACTCACAAAAGA 59.036 34.615 0.00 0.00 0.00 2.52
153 155 8.100791 ACAAAGTCATACAAGACCAAAGCTATA 58.899 33.333 0.00 0.00 39.34 1.31
179 181 3.066203 GCGGAGGAAGAAGAAAAACAACA 59.934 43.478 0.00 0.00 0.00 3.33
186 188 7.105588 AGGAAGAAGAAAAACAACAAAGCAAT 58.894 30.769 0.00 0.00 0.00 3.56
201 203 5.987347 ACAAAGCAATGAAAACAGAGATTGG 59.013 36.000 0.00 0.00 0.00 3.16
415 421 9.998106 ATGTGTATTGTTGTATATACTCCCTTC 57.002 33.333 13.89 1.30 0.00 3.46
431 437 7.059202 ACTCCCTTCGTTTCTTTTTAGTCTA 57.941 36.000 0.00 0.00 0.00 2.59
436 442 8.654215 CCCTTCGTTTCTTTTTAGTCTACATAC 58.346 37.037 0.00 0.00 0.00 2.39
467 473 5.941058 TGGTCAAAGTCAAACTACACAAAGA 59.059 36.000 0.00 0.00 0.00 2.52
468 474 6.601613 TGGTCAAAGTCAAACTACACAAAGAT 59.398 34.615 0.00 0.00 0.00 2.40
677 683 3.386726 TCGGAGGGACTACATTGTATTGG 59.613 47.826 0.00 0.00 41.36 3.16
680 686 5.308825 GGAGGGACTACATTGTATTGGATG 58.691 45.833 0.00 0.00 40.63 3.51
719 725 1.213537 CGCCAATGTGGAAAGCAGG 59.786 57.895 0.00 0.00 40.96 4.85
757 763 0.762418 TTCGTTTCTCCTTGGCCTCA 59.238 50.000 3.32 0.00 0.00 3.86
773 779 1.475751 CCTCACACTGACTGCACCTTT 60.476 52.381 0.00 0.00 0.00 3.11
774 780 1.869767 CTCACACTGACTGCACCTTTC 59.130 52.381 0.00 0.00 0.00 2.62
776 782 2.092968 TCACACTGACTGCACCTTTCTT 60.093 45.455 0.00 0.00 0.00 2.52
777 783 3.133901 TCACACTGACTGCACCTTTCTTA 59.866 43.478 0.00 0.00 0.00 2.10
853 863 1.597797 TACTACCCGCCACTGAACCG 61.598 60.000 0.00 0.00 0.00 4.44
918 928 1.351017 TGACTCCACCAAACTCCATCC 59.649 52.381 0.00 0.00 0.00 3.51
919 929 1.351017 GACTCCACCAAACTCCATCCA 59.649 52.381 0.00 0.00 0.00 3.41
920 930 1.995542 ACTCCACCAAACTCCATCCAT 59.004 47.619 0.00 0.00 0.00 3.41
921 931 2.025887 ACTCCACCAAACTCCATCCATC 60.026 50.000 0.00 0.00 0.00 3.51
988 1040 3.494336 GCGAGCGAGCAAGCACAT 61.494 61.111 6.21 0.00 40.15 3.21
992 1044 2.815211 GCGAGCAAGCACATCGGA 60.815 61.111 4.71 0.00 36.96 4.55
999 1052 0.108472 CAAGCACATCGGAGAGAGCA 60.108 55.000 5.70 0.00 43.63 4.26
1122 1175 1.803519 CGACAAGCTCGAGTGGCTC 60.804 63.158 15.13 3.50 46.14 4.70
1468 1521 1.878522 CTACCACATCGAGCACGCC 60.879 63.158 0.00 0.00 39.58 5.68
1558 1615 7.094377 GCTCCCAAATTTACTTCTGTATGTTCA 60.094 37.037 0.00 0.00 0.00 3.18
1575 1637 3.072476 TGTTCATCCTCTCCGGTTCTTTT 59.928 43.478 0.00 0.00 0.00 2.27
1576 1638 3.611766 TCATCCTCTCCGGTTCTTTTC 57.388 47.619 0.00 0.00 0.00 2.29
1577 1639 3.173965 TCATCCTCTCCGGTTCTTTTCT 58.826 45.455 0.00 0.00 0.00 2.52
1578 1640 3.583086 TCATCCTCTCCGGTTCTTTTCTT 59.417 43.478 0.00 0.00 0.00 2.52
1579 1641 4.041691 TCATCCTCTCCGGTTCTTTTCTTT 59.958 41.667 0.00 0.00 0.00 2.52
1593 1655 7.413000 GGTTCTTTTCTTTCTTTCAGCCAAAAC 60.413 37.037 0.00 0.00 0.00 2.43
1596 1658 4.385358 TCTTTCTTTCAGCCAAAACCAC 57.615 40.909 0.00 0.00 0.00 4.16
1600 1662 0.457851 TTTCAGCCAAAACCACCACG 59.542 50.000 0.00 0.00 0.00 4.94
1621 1683 6.190264 CACGCAAAATCAGAGACATAATCAG 58.810 40.000 0.00 0.00 0.00 2.90
1626 1688 8.668353 GCAAAATCAGAGACATAATCAGTAACA 58.332 33.333 0.00 0.00 0.00 2.41
1658 1720 6.622549 AGAGTTGAAAGATACGAACCTACTG 58.377 40.000 0.00 0.00 0.00 2.74
1659 1721 5.169295 AGTTGAAAGATACGAACCTACTGC 58.831 41.667 0.00 0.00 0.00 4.40
1660 1722 5.047235 AGTTGAAAGATACGAACCTACTGCT 60.047 40.000 0.00 0.00 0.00 4.24
1661 1723 5.401531 TGAAAGATACGAACCTACTGCTT 57.598 39.130 0.00 0.00 0.00 3.91
1662 1724 5.168569 TGAAAGATACGAACCTACTGCTTG 58.831 41.667 0.00 0.00 0.00 4.01
1664 1726 5.599999 AAGATACGAACCTACTGCTTGAT 57.400 39.130 0.00 0.00 0.00 2.57
1701 2457 8.970859 TCTGAGATTTCTTCCTTGATTATTCC 57.029 34.615 0.00 0.00 0.00 3.01
1798 2555 6.000891 TCTCTGAAAATGAAAATGACACCG 57.999 37.500 0.00 0.00 0.00 4.94
1839 2598 5.824904 ATGCAACAGATACTTCCAATGAC 57.175 39.130 0.00 0.00 0.00 3.06
1856 2615 3.207265 TGACTGCCTGCTTGAGTTAAA 57.793 42.857 0.00 0.00 0.00 1.52
1870 2629 8.721478 TGCTTGAGTTAAACAATGTAGATTCTC 58.279 33.333 0.00 0.00 0.00 2.87
1907 2666 6.712547 AGCTACTTCATTTTATATGCCAGGAC 59.287 38.462 0.00 0.00 0.00 3.85
1908 2667 6.347725 GCTACTTCATTTTATATGCCAGGACG 60.348 42.308 0.00 0.00 0.00 4.79
1952 2711 5.304101 TCAAATTATTGGTTGCCACTGTTCT 59.696 36.000 0.00 0.00 37.15 3.01
1954 2713 2.071778 ATTGGTTGCCACTGTTCTGT 57.928 45.000 0.00 0.00 30.78 3.41
1956 2715 0.813610 TGGTTGCCACTGTTCTGTCG 60.814 55.000 0.00 0.00 0.00 4.35
1957 2716 0.814010 GGTTGCCACTGTTCTGTCGT 60.814 55.000 0.00 0.00 0.00 4.34
1958 2717 0.582005 GTTGCCACTGTTCTGTCGTC 59.418 55.000 0.00 0.00 0.00 4.20
1960 2719 1.007734 GCCACTGTTCTGTCGTCGA 60.008 57.895 0.00 0.00 0.00 4.20
1961 2720 1.004277 GCCACTGTTCTGTCGTCGAG 61.004 60.000 0.00 0.00 0.00 4.04
1962 2721 0.387367 CCACTGTTCTGTCGTCGAGG 60.387 60.000 0.00 0.00 0.00 4.63
1974 2749 0.249073 CGTCGAGGAGCTAACCATGG 60.249 60.000 11.19 11.19 0.00 3.66
1975 2750 1.112113 GTCGAGGAGCTAACCATGGA 58.888 55.000 21.47 0.00 0.00 3.41
1976 2751 1.067821 GTCGAGGAGCTAACCATGGAG 59.932 57.143 21.47 7.51 0.00 3.86
1977 2752 1.115467 CGAGGAGCTAACCATGGAGT 58.885 55.000 21.47 8.44 0.00 3.85
1978 2753 2.092049 TCGAGGAGCTAACCATGGAGTA 60.092 50.000 21.47 9.21 0.00 2.59
1979 2754 2.294791 CGAGGAGCTAACCATGGAGTAG 59.705 54.545 21.47 19.10 0.00 2.57
1980 2755 2.036604 GAGGAGCTAACCATGGAGTAGC 59.963 54.545 29.54 29.54 0.00 3.58
1981 2756 2.043227 GGAGCTAACCATGGAGTAGCT 58.957 52.381 34.93 34.93 45.60 3.32
1982 2757 3.117093 AGGAGCTAACCATGGAGTAGCTA 60.117 47.826 34.66 13.22 43.31 3.32
1983 2758 3.257127 GGAGCTAACCATGGAGTAGCTAG 59.743 52.174 34.66 19.84 43.31 3.42
1984 2759 2.630580 AGCTAACCATGGAGTAGCTAGC 59.369 50.000 34.15 25.03 41.71 3.42
1985 2760 2.365617 GCTAACCATGGAGTAGCTAGCA 59.634 50.000 29.47 0.00 32.44 3.49
2055 2864 4.321230 GCTGACTGGTTTAGTGAATTTGGG 60.321 45.833 0.00 0.00 40.53 4.12
2137 2946 4.447069 AGCTGCTCGACGTCGACG 62.447 66.667 34.97 34.58 44.22 5.12
2628 3437 1.580942 CCCGGAGAACACGTACGAA 59.419 57.895 24.41 0.00 0.00 3.85
2685 3494 4.077184 CCCGGCCGCTACAAGTCA 62.077 66.667 22.85 0.00 0.00 3.41
3095 3904 1.006571 TGGACAAGGACGAGTTCGC 60.007 57.895 0.73 0.00 44.43 4.70
3921 4730 0.267054 TGGAGGAGGAGGATGATGCT 59.733 55.000 0.00 0.00 0.00 3.79
3926 4735 1.003349 GGAGGAGGATGATGCTGATGG 59.997 57.143 0.00 0.00 0.00 3.51
3929 4738 1.575576 GAGGATGATGCTGATGGCGC 61.576 60.000 0.00 0.00 45.43 6.53
4023 4832 2.359850 TTCGTGGACATGCTGGGC 60.360 61.111 0.00 0.00 0.00 5.36
4092 4901 4.821589 GAGCGGCTGGAGTTCGGG 62.822 72.222 7.50 0.00 0.00 5.14
4391 5200 1.733041 CGGCGTTCGTCTGTGTCAT 60.733 57.895 0.00 0.00 0.00 3.06
4392 5201 1.781555 GGCGTTCGTCTGTGTCATG 59.218 57.895 0.00 0.00 0.00 3.07
4393 5202 0.944311 GGCGTTCGTCTGTGTCATGT 60.944 55.000 0.00 0.00 0.00 3.21
4394 5203 0.435008 GCGTTCGTCTGTGTCATGTC 59.565 55.000 0.00 0.00 0.00 3.06
4395 5204 0.702924 CGTTCGTCTGTGTCATGTCG 59.297 55.000 0.00 0.00 0.00 4.35
4429 5245 1.561542 GGAGAAGGAGGGCATTCTTGA 59.438 52.381 0.00 0.00 44.42 3.02
4435 5251 1.087501 GAGGGCATTCTTGACGTTCC 58.912 55.000 0.00 0.00 0.00 3.62
4436 5252 0.673644 AGGGCATTCTTGACGTTCCG 60.674 55.000 0.00 0.00 0.00 4.30
4473 5291 3.381908 AGCCTTCTTCTGTATCGTCGAAT 59.618 43.478 0.00 0.00 0.00 3.34
4564 5390 8.938883 ACTTTGTATCTATGGGAATGACTATGT 58.061 33.333 0.00 0.00 0.00 2.29
4581 5407 0.594602 TGTCTCCGACACTGGTTACG 59.405 55.000 0.00 0.00 37.67 3.18
4582 5408 0.595095 GTCTCCGACACTGGTTACGT 59.405 55.000 0.00 0.00 32.09 3.57
4586 5412 1.282248 CCGACACTGGTTACGTGCAG 61.282 60.000 0.00 0.00 35.84 4.41
4609 5435 7.270047 CAGGAATTGCAATTTTCATATGGACT 58.730 34.615 24.81 8.49 0.00 3.85
4610 5436 7.223971 CAGGAATTGCAATTTTCATATGGACTG 59.776 37.037 24.81 14.85 0.00 3.51
4611 5437 6.480981 GGAATTGCAATTTTCATATGGACTGG 59.519 38.462 24.81 0.00 0.00 4.00
4612 5438 5.999205 TTGCAATTTTCATATGGACTGGT 57.001 34.783 2.13 0.00 0.00 4.00
4613 5439 5.999205 TGCAATTTTCATATGGACTGGTT 57.001 34.783 2.13 0.00 0.00 3.67
4614 5440 6.357579 TGCAATTTTCATATGGACTGGTTT 57.642 33.333 2.13 0.00 0.00 3.27
4615 5441 6.397272 TGCAATTTTCATATGGACTGGTTTC 58.603 36.000 2.13 0.00 0.00 2.78
4616 5442 6.211184 TGCAATTTTCATATGGACTGGTTTCT 59.789 34.615 2.13 0.00 0.00 2.52
4617 5443 6.753744 GCAATTTTCATATGGACTGGTTTCTC 59.246 38.462 2.13 0.00 0.00 2.87
4618 5444 7.577426 GCAATTTTCATATGGACTGGTTTCTCA 60.577 37.037 2.13 0.00 0.00 3.27
4619 5445 6.817765 TTTTCATATGGACTGGTTTCTCAC 57.182 37.500 2.13 0.00 0.00 3.51
4636 5462 6.682423 TTCTCACCGTCGTATACAAATAGA 57.318 37.500 3.32 0.00 0.00 1.98
4642 5468 7.598118 TCACCGTCGTATACAAATAGAAAAACA 59.402 33.333 3.32 0.00 0.00 2.83
4643 5469 8.385111 CACCGTCGTATACAAATAGAAAAACAT 58.615 33.333 3.32 0.00 0.00 2.71
4644 5470 8.938906 ACCGTCGTATACAAATAGAAAAACATT 58.061 29.630 3.32 0.00 0.00 2.71
4645 5471 9.763465 CCGTCGTATACAAATAGAAAAACATTT 57.237 29.630 3.32 0.00 0.00 2.32
4674 5500 6.777213 TTTAAGCTGTGGTAAGGTTTTTCA 57.223 33.333 0.00 0.00 38.72 2.69
4675 5501 6.969993 TTAAGCTGTGGTAAGGTTTTTCAT 57.030 33.333 0.00 0.00 38.72 2.57
4676 5502 4.853924 AGCTGTGGTAAGGTTTTTCATG 57.146 40.909 0.00 0.00 0.00 3.07
4679 5505 2.630580 TGTGGTAAGGTTTTTCATGGGC 59.369 45.455 0.00 0.00 0.00 5.36
4680 5506 2.630580 GTGGTAAGGTTTTTCATGGGCA 59.369 45.455 0.00 0.00 0.00 5.36
4681 5507 2.630580 TGGTAAGGTTTTTCATGGGCAC 59.369 45.455 0.00 0.00 0.00 5.01
4695 5568 4.280019 GCACCCCAAACTCCCGGT 62.280 66.667 0.00 0.00 0.00 5.28
4702 5575 1.550130 CCAAACTCCCGGTCAGCCTA 61.550 60.000 0.00 0.00 0.00 3.93
4703 5576 0.391263 CAAACTCCCGGTCAGCCTAC 60.391 60.000 0.00 0.00 0.00 3.18
4713 5586 1.982395 TCAGCCTACCCGGTCACTG 60.982 63.158 0.00 0.45 34.25 3.66
4716 5589 1.982938 GCCTACCCGGTCACTGACT 60.983 63.158 9.08 0.00 32.47 3.41
4717 5590 1.946475 GCCTACCCGGTCACTGACTC 61.946 65.000 9.08 0.00 32.47 3.36
4718 5591 0.611062 CCTACCCGGTCACTGACTCA 60.611 60.000 9.08 0.00 32.47 3.41
4719 5592 0.526662 CTACCCGGTCACTGACTCAC 59.473 60.000 9.08 0.00 32.47 3.51
4720 5593 1.239296 TACCCGGTCACTGACTCACG 61.239 60.000 9.08 4.51 32.47 4.35
4721 5594 2.430921 CCGGTCACTGACTCACGC 60.431 66.667 9.08 0.00 32.47 5.34
4722 5595 2.801162 CGGTCACTGACTCACGCG 60.801 66.667 3.53 3.53 32.47 6.01
4723 5596 2.643272 GGTCACTGACTCACGCGA 59.357 61.111 15.93 0.00 32.47 5.87
4730 5603 2.032894 CACTGACTCACGCGAAAATTGT 60.033 45.455 15.93 2.08 0.00 2.71
4734 5607 1.070843 ACTCACGCGAAAATTGTCACG 60.071 47.619 15.93 4.51 0.00 4.35
4757 5630 3.747976 GCGGCTGGCAAATTCGGT 61.748 61.111 1.08 0.00 42.87 4.69
4771 5644 3.652057 ATTCGGTCCAAATGTCCAGAT 57.348 42.857 0.00 0.00 0.00 2.90
4781 5654 0.392998 ATGTCCAGATTGACCGGCAC 60.393 55.000 0.00 0.00 34.25 5.01
4782 5655 1.296715 GTCCAGATTGACCGGCACT 59.703 57.895 0.00 0.00 0.00 4.40
4784 5657 1.450312 CCAGATTGACCGGCACTCC 60.450 63.158 0.00 0.00 0.00 3.85
4785 5658 1.450312 CAGATTGACCGGCACTCCC 60.450 63.158 0.00 0.00 0.00 4.30
4786 5659 2.124695 GATTGACCGGCACTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
4787 5660 2.933287 ATTGACCGGCACTCCCCA 60.933 61.111 0.00 0.00 0.00 4.96
4788 5661 2.270874 GATTGACCGGCACTCCCCAT 62.271 60.000 0.00 0.00 0.00 4.00
4789 5662 0.986019 ATTGACCGGCACTCCCCATA 60.986 55.000 0.00 0.00 0.00 2.74
4790 5663 0.986019 TTGACCGGCACTCCCCATAT 60.986 55.000 0.00 0.00 0.00 1.78
4791 5664 1.371558 GACCGGCACTCCCCATATC 59.628 63.158 0.00 0.00 0.00 1.63
4792 5665 1.074471 ACCGGCACTCCCCATATCT 60.074 57.895 0.00 0.00 0.00 1.98
4793 5666 1.372683 CCGGCACTCCCCATATCTG 59.627 63.158 0.00 0.00 0.00 2.90
4794 5667 1.372683 CGGCACTCCCCATATCTGG 59.627 63.158 0.00 0.00 42.73 3.86
4806 5679 1.511613 ATATCTGGGGCGGATATGGG 58.488 55.000 0.00 0.00 39.92 4.00
4807 5680 0.620410 TATCTGGGGCGGATATGGGG 60.620 60.000 0.00 0.00 31.33 4.96
4808 5681 2.415962 ATCTGGGGCGGATATGGGGA 62.416 60.000 0.00 0.00 0.00 4.81
4809 5682 2.852075 TGGGGCGGATATGGGGAC 60.852 66.667 0.00 0.00 0.00 4.46
4810 5683 4.016706 GGGGCGGATATGGGGACG 62.017 72.222 0.00 0.00 0.00 4.79
4811 5684 4.699522 GGGCGGATATGGGGACGC 62.700 72.222 0.00 0.00 0.00 5.19
4812 5685 4.699522 GGCGGATATGGGGACGCC 62.700 72.222 11.28 11.28 35.36 5.68
4813 5686 4.699522 GCGGATATGGGGACGCCC 62.700 72.222 6.02 6.38 44.51 6.13
4814 5687 4.373116 CGGATATGGGGACGCCCG 62.373 72.222 6.02 0.00 46.66 6.13
4815 5688 4.016706 GGATATGGGGACGCCCGG 62.017 72.222 6.02 0.00 46.66 5.73
4816 5689 4.016706 GATATGGGGACGCCCGGG 62.017 72.222 19.09 19.09 46.66 5.73
4837 5710 4.814294 GCCCGCCACGTAGGACTG 62.814 72.222 8.04 0.00 41.22 3.51
4838 5711 4.814294 CCCGCCACGTAGGACTGC 62.814 72.222 8.04 0.00 41.22 4.40
4839 5712 4.063967 CCGCCACGTAGGACTGCA 62.064 66.667 8.04 0.00 41.22 4.41
4840 5713 2.507102 CGCCACGTAGGACTGCAG 60.507 66.667 13.48 13.48 41.22 4.41
4841 5714 2.125512 GCCACGTAGGACTGCAGG 60.126 66.667 19.93 0.72 41.22 4.85
4842 5715 2.646175 GCCACGTAGGACTGCAGGA 61.646 63.158 19.93 0.00 41.22 3.86
4843 5716 1.215647 CCACGTAGGACTGCAGGAC 59.784 63.158 19.93 10.32 41.22 3.85
4844 5717 1.251527 CCACGTAGGACTGCAGGACT 61.252 60.000 19.93 17.30 41.22 3.85
4845 5718 0.109086 CACGTAGGACTGCAGGACTG 60.109 60.000 19.93 7.13 0.00 3.51
4846 5719 0.251209 ACGTAGGACTGCAGGACTGA 60.251 55.000 19.93 2.43 0.00 3.41
4847 5720 0.171455 CGTAGGACTGCAGGACTGAC 59.829 60.000 19.93 12.25 0.00 3.51
4848 5721 0.533032 GTAGGACTGCAGGACTGACC 59.467 60.000 19.93 10.83 39.35 4.02
4849 5722 0.965866 TAGGACTGCAGGACTGACCG 60.966 60.000 19.93 0.00 44.74 4.79
4850 5723 2.433318 GACTGCAGGACTGACCGC 60.433 66.667 19.93 6.19 44.74 5.68
4851 5724 2.919856 ACTGCAGGACTGACCGCT 60.920 61.111 19.93 0.00 44.74 5.52
4852 5725 1.595993 GACTGCAGGACTGACCGCTA 61.596 60.000 19.93 2.10 44.74 4.26
4853 5726 1.140589 CTGCAGGACTGACCGCTAG 59.859 63.158 5.57 0.00 44.74 3.42
4854 5727 2.290122 CTGCAGGACTGACCGCTAGG 62.290 65.000 5.57 0.00 44.74 3.02
4855 5728 3.082579 GCAGGACTGACCGCTAGGG 62.083 68.421 3.00 0.00 44.74 3.53
4879 5752 0.790207 CGCCAATTCGTCCATATCCG 59.210 55.000 0.00 0.00 0.00 4.18
4889 5762 2.592993 CCATATCCGTCCCCGCCAT 61.593 63.158 0.00 0.00 0.00 4.40
4900 5773 2.124151 CCGCCATCCCCTTCCTTG 60.124 66.667 0.00 0.00 0.00 3.61
4909 5796 2.045926 CCTTCCTTGCCCGACCAG 60.046 66.667 0.00 0.00 0.00 4.00
4917 5804 4.035102 GCCCGACCAGCCCTTCTT 62.035 66.667 0.00 0.00 0.00 2.52
4949 5836 4.657824 CCTCGTCCGCACAACCGT 62.658 66.667 0.00 0.00 0.00 4.83
4950 5837 3.103911 CTCGTCCGCACAACCGTC 61.104 66.667 0.00 0.00 0.00 4.79
4951 5838 3.834447 CTCGTCCGCACAACCGTCA 62.834 63.158 0.00 0.00 0.00 4.35
4952 5839 3.698463 CGTCCGCACAACCGTCAC 61.698 66.667 0.00 0.00 0.00 3.67
4961 5848 0.179078 ACAACCGTCACCGCAGTTTA 60.179 50.000 0.00 0.00 0.00 2.01
4966 5853 2.740826 TCACCGCAGTTTAGCCGC 60.741 61.111 0.00 0.00 0.00 6.53
4971 5858 2.106074 CGCAGTTTAGCCGCCATCA 61.106 57.895 0.00 0.00 0.00 3.07
4979 5866 2.994387 TAGCCGCCATCATTGCTCCG 62.994 60.000 0.00 0.00 35.34 4.63
4981 5868 2.898840 CGCCATCATTGCTCCGCT 60.899 61.111 0.00 0.00 0.00 5.52
4989 5876 0.745486 CATTGCTCCGCTGTCATCCA 60.745 55.000 0.00 0.00 0.00 3.41
4994 5881 0.320683 CTCCGCTGTCATCCACAACA 60.321 55.000 0.00 0.00 33.31 3.33
5031 5918 4.778143 GCCCGAATCCACACCGCT 62.778 66.667 0.00 0.00 0.00 5.52
5032 5919 2.819595 CCCGAATCCACACCGCTG 60.820 66.667 0.00 0.00 0.00 5.18
5035 5922 2.359850 GAATCCACACCGCTGCCA 60.360 61.111 0.00 0.00 0.00 4.92
5042 5929 2.672651 CACCGCTGCCAACCATGA 60.673 61.111 0.00 0.00 0.00 3.07
5046 5933 2.562912 GCTGCCAACCATGACGTG 59.437 61.111 0.00 0.00 0.00 4.49
5048 5935 1.308069 GCTGCCAACCATGACGTGAT 61.308 55.000 0.00 0.00 0.00 3.06
5051 5938 0.739462 GCCAACCATGACGTGATCGA 60.739 55.000 0.00 0.00 40.62 3.59
5060 5947 1.202143 TGACGTGATCGATCAAGGTCG 60.202 52.381 33.18 29.84 41.56 4.79
5061 5948 0.809385 ACGTGATCGATCAAGGTCGT 59.191 50.000 34.24 30.39 42.07 4.34
5066 5953 1.663379 ATCGATCAAGGTCGTCGCCA 61.663 55.000 2.37 0.00 42.07 5.69
5069 5956 3.642778 ATCAAGGTCGTCGCCACCG 62.643 63.158 8.15 0.00 39.13 4.94
5096 5983 1.408266 GCCCCAATACGTCCAACTCAT 60.408 52.381 0.00 0.00 0.00 2.90
5097 5984 2.561569 CCCCAATACGTCCAACTCATC 58.438 52.381 0.00 0.00 0.00 2.92
5099 5986 2.201732 CCAATACGTCCAACTCATCCG 58.798 52.381 0.00 0.00 0.00 4.18
5113 6000 3.439476 ACTCATCCGTATATACACCTCGC 59.561 47.826 13.22 0.00 0.00 5.03
5114 6001 3.414269 TCATCCGTATATACACCTCGCA 58.586 45.455 13.22 0.00 0.00 5.10
5120 6007 4.142945 CCGTATATACACCTCGCACTCTAC 60.143 50.000 13.22 0.00 0.00 2.59
5121 6008 4.450080 CGTATATACACCTCGCACTCTACA 59.550 45.833 13.22 0.00 0.00 2.74
5124 6011 1.257743 ACACCTCGCACTCTACATGT 58.742 50.000 2.69 2.69 0.00 3.21
5126 6013 2.037251 ACACCTCGCACTCTACATGTTT 59.963 45.455 2.30 0.00 0.00 2.83
5127 6014 2.413112 CACCTCGCACTCTACATGTTTG 59.587 50.000 2.30 0.00 0.00 2.93
5137 6024 6.744537 GCACTCTACATGTTTGATGAAATGTC 59.255 38.462 2.30 0.00 35.07 3.06
5138 6025 7.246311 CACTCTACATGTTTGATGAAATGTCC 58.754 38.462 2.30 0.00 35.07 4.02
5144 6031 2.487762 GTTTGATGAAATGTCCGAGCCA 59.512 45.455 0.00 0.00 0.00 4.75
5146 6033 1.554617 TGATGAAATGTCCGAGCCAGA 59.445 47.619 0.00 0.00 0.00 3.86
5157 6044 4.876107 TGTCCGAGCCAGATTTTTATTCTC 59.124 41.667 0.00 0.00 0.00 2.87
5180 6068 8.195436 TCTCTTGGTCATTATTCTAGTAAACCG 58.805 37.037 0.00 0.00 0.00 4.44
5187 6075 9.490379 GTCATTATTCTAGTAAACCGATGGATT 57.510 33.333 0.00 0.00 0.00 3.01
5192 6080 2.805845 AGTAAACCGATGGATTCGTCG 58.194 47.619 8.76 8.76 46.65 5.12
5203 6091 0.796312 GATTCGTCGTGCAATGGTGT 59.204 50.000 0.00 0.00 0.00 4.16
5204 6092 1.196808 GATTCGTCGTGCAATGGTGTT 59.803 47.619 0.00 0.00 0.00 3.32
5205 6093 0.306228 TTCGTCGTGCAATGGTGTTG 59.694 50.000 0.00 0.00 0.00 3.33
5206 6094 1.082169 CGTCGTGCAATGGTGTTGG 60.082 57.895 0.00 0.00 0.00 3.77
5207 6095 1.502990 CGTCGTGCAATGGTGTTGGA 61.503 55.000 0.00 0.00 0.00 3.53
5208 6096 0.238289 GTCGTGCAATGGTGTTGGAG 59.762 55.000 0.00 0.00 0.00 3.86
5209 6097 0.179032 TCGTGCAATGGTGTTGGAGT 60.179 50.000 0.00 0.00 0.00 3.85
5210 6098 1.070914 TCGTGCAATGGTGTTGGAGTA 59.929 47.619 0.00 0.00 0.00 2.59
5211 6099 1.196808 CGTGCAATGGTGTTGGAGTAC 59.803 52.381 0.00 0.00 0.00 2.73
5212 6100 1.539827 GTGCAATGGTGTTGGAGTACC 59.460 52.381 0.00 0.00 37.48 3.34
5213 6101 1.173913 GCAATGGTGTTGGAGTACCC 58.826 55.000 0.00 0.00 36.10 3.69
5214 6102 1.271926 GCAATGGTGTTGGAGTACCCT 60.272 52.381 0.00 0.00 36.10 4.34
5215 6103 2.026636 GCAATGGTGTTGGAGTACCCTA 60.027 50.000 0.00 0.00 36.10 3.53
5216 6104 3.560453 GCAATGGTGTTGGAGTACCCTAA 60.560 47.826 0.00 0.00 36.10 2.69
5217 6105 3.994931 ATGGTGTTGGAGTACCCTAAC 57.005 47.619 0.00 0.00 36.10 2.34
5218 6106 1.980036 TGGTGTTGGAGTACCCTAACC 59.020 52.381 1.23 6.86 36.10 2.85
5219 6107 1.980036 GGTGTTGGAGTACCCTAACCA 59.020 52.381 1.23 0.00 34.52 3.67
5220 6108 2.372837 GGTGTTGGAGTACCCTAACCAA 59.627 50.000 1.23 0.00 39.60 3.67
5221 6109 3.181441 GGTGTTGGAGTACCCTAACCAAA 60.181 47.826 1.23 0.00 42.71 3.28
5222 6110 4.070009 GTGTTGGAGTACCCTAACCAAAG 58.930 47.826 1.23 0.00 42.71 2.77
5223 6111 3.717913 TGTTGGAGTACCCTAACCAAAGT 59.282 43.478 1.23 0.00 42.71 2.66
5224 6112 4.070009 GTTGGAGTACCCTAACCAAAGTG 58.930 47.826 0.00 0.00 42.71 3.16
5225 6113 3.589641 TGGAGTACCCTAACCAAAGTGA 58.410 45.455 0.00 0.00 35.38 3.41
5226 6114 3.325716 TGGAGTACCCTAACCAAAGTGAC 59.674 47.826 0.00 0.00 35.38 3.67
5227 6115 3.582780 GAGTACCCTAACCAAAGTGACG 58.417 50.000 0.00 0.00 0.00 4.35
5228 6116 2.071540 GTACCCTAACCAAAGTGACGC 58.928 52.381 0.00 0.00 0.00 5.19
5229 6117 0.470766 ACCCTAACCAAAGTGACGCA 59.529 50.000 0.00 0.00 0.00 5.24
5230 6118 1.134037 ACCCTAACCAAAGTGACGCAA 60.134 47.619 0.00 0.00 0.00 4.85
5231 6119 1.950909 CCCTAACCAAAGTGACGCAAA 59.049 47.619 0.00 0.00 0.00 3.68
5232 6120 2.359531 CCCTAACCAAAGTGACGCAAAA 59.640 45.455 0.00 0.00 0.00 2.44
5233 6121 3.550030 CCCTAACCAAAGTGACGCAAAAG 60.550 47.826 0.00 0.00 0.00 2.27
5234 6122 3.066203 CCTAACCAAAGTGACGCAAAAGT 59.934 43.478 0.00 0.00 0.00 2.66
5235 6123 2.559998 ACCAAAGTGACGCAAAAGTG 57.440 45.000 0.00 0.00 0.00 3.16
5236 6124 2.088423 ACCAAAGTGACGCAAAAGTGA 58.912 42.857 0.00 0.00 0.00 3.41
5237 6125 2.159435 ACCAAAGTGACGCAAAAGTGAC 60.159 45.455 0.00 0.00 0.00 3.67
5238 6126 2.101125 CAAAGTGACGCAAAAGTGACG 58.899 47.619 0.00 0.00 33.48 4.35
5239 6127 0.655733 AAGTGACGCAAAAGTGACGG 59.344 50.000 0.00 0.00 33.48 4.79
5240 6128 0.461339 AGTGACGCAAAAGTGACGGT 60.461 50.000 0.00 0.00 33.48 4.83
5241 6129 0.042448 GTGACGCAAAAGTGACGGTC 60.042 55.000 0.00 0.00 0.00 4.79
5242 6130 0.179094 TGACGCAAAAGTGACGGTCT 60.179 50.000 9.88 0.00 0.00 3.85
5243 6131 0.935196 GACGCAAAAGTGACGGTCTT 59.065 50.000 9.88 0.00 0.00 3.01
5244 6132 0.935196 ACGCAAAAGTGACGGTCTTC 59.065 50.000 9.88 3.02 0.00 2.87
5245 6133 1.217882 CGCAAAAGTGACGGTCTTCT 58.782 50.000 9.88 5.27 0.00 2.85
5246 6134 2.223876 ACGCAAAAGTGACGGTCTTCTA 60.224 45.455 9.88 0.00 0.00 2.10
5247 6135 2.993899 CGCAAAAGTGACGGTCTTCTAT 59.006 45.455 9.88 0.00 0.00 1.98
5248 6136 3.181530 CGCAAAAGTGACGGTCTTCTATG 60.182 47.826 9.88 10.82 0.00 2.23
5249 6137 3.994392 GCAAAAGTGACGGTCTTCTATGA 59.006 43.478 9.88 0.00 0.00 2.15
5250 6138 4.631813 GCAAAAGTGACGGTCTTCTATGAT 59.368 41.667 9.88 0.00 0.00 2.45
5251 6139 5.122396 GCAAAAGTGACGGTCTTCTATGATT 59.878 40.000 9.88 0.00 0.00 2.57
5252 6140 6.348540 GCAAAAGTGACGGTCTTCTATGATTT 60.349 38.462 9.88 3.46 0.00 2.17
5253 6141 7.584987 CAAAAGTGACGGTCTTCTATGATTTT 58.415 34.615 9.88 3.16 0.00 1.82
5254 6142 6.969828 AAGTGACGGTCTTCTATGATTTTC 57.030 37.500 9.88 0.00 0.00 2.29
5255 6143 6.037786 AGTGACGGTCTTCTATGATTTTCA 57.962 37.500 9.88 0.00 0.00 2.69
5256 6144 6.464222 AGTGACGGTCTTCTATGATTTTCAA 58.536 36.000 9.88 0.00 0.00 2.69
5257 6145 6.369065 AGTGACGGTCTTCTATGATTTTCAAC 59.631 38.462 9.88 0.00 0.00 3.18
5258 6146 6.147164 GTGACGGTCTTCTATGATTTTCAACA 59.853 38.462 9.88 0.00 0.00 3.33
5259 6147 6.147164 TGACGGTCTTCTATGATTTTCAACAC 59.853 38.462 9.88 0.00 0.00 3.32
5260 6148 5.995282 ACGGTCTTCTATGATTTTCAACACA 59.005 36.000 0.00 0.00 0.00 3.72
5261 6149 6.485313 ACGGTCTTCTATGATTTTCAACACAA 59.515 34.615 0.00 0.00 0.00 3.33
5262 6150 7.174946 ACGGTCTTCTATGATTTTCAACACAAT 59.825 33.333 0.00 0.00 0.00 2.71
5263 6151 7.482743 CGGTCTTCTATGATTTTCAACACAATG 59.517 37.037 0.00 0.00 0.00 2.82
5264 6152 7.756722 GGTCTTCTATGATTTTCAACACAATGG 59.243 37.037 0.00 0.00 0.00 3.16
5265 6153 8.514594 GTCTTCTATGATTTTCAACACAATGGA 58.485 33.333 0.00 0.00 0.00 3.41
5266 6154 9.076781 TCTTCTATGATTTTCAACACAATGGAA 57.923 29.630 0.00 0.00 0.00 3.53
5267 6155 9.695526 CTTCTATGATTTTCAACACAATGGAAA 57.304 29.630 0.00 0.00 32.52 3.13
5268 6156 9.474920 TTCTATGATTTTCAACACAATGGAAAC 57.525 29.630 0.00 0.00 30.79 2.78
5269 6157 8.859090 TCTATGATTTTCAACACAATGGAAACT 58.141 29.630 0.00 0.00 30.79 2.66
5270 6158 9.480053 CTATGATTTTCAACACAATGGAAACTT 57.520 29.630 0.00 0.00 30.79 2.66
5271 6159 7.536895 TGATTTTCAACACAATGGAAACTTG 57.463 32.000 0.00 0.00 30.79 3.16
5272 6160 7.326454 TGATTTTCAACACAATGGAAACTTGA 58.674 30.769 0.00 0.00 30.79 3.02
5273 6161 6.959671 TTTTCAACACAATGGAAACTTGAC 57.040 33.333 0.00 0.00 30.86 3.18
5274 6162 4.285807 TCAACACAATGGAAACTTGACG 57.714 40.909 0.00 0.00 0.00 4.35
5275 6163 3.692101 TCAACACAATGGAAACTTGACGT 59.308 39.130 0.00 0.00 0.00 4.34
5276 6164 4.876679 TCAACACAATGGAAACTTGACGTA 59.123 37.500 0.00 0.00 0.00 3.57
5277 6165 5.354513 TCAACACAATGGAAACTTGACGTAA 59.645 36.000 0.00 0.00 0.00 3.18
5278 6166 5.821516 ACACAATGGAAACTTGACGTAAA 57.178 34.783 0.00 0.00 0.00 2.01
5279 6167 6.197364 ACACAATGGAAACTTGACGTAAAA 57.803 33.333 0.00 0.00 0.00 1.52
5280 6168 6.262601 ACACAATGGAAACTTGACGTAAAAG 58.737 36.000 8.53 8.53 0.00 2.27
5281 6169 6.127842 ACACAATGGAAACTTGACGTAAAAGT 60.128 34.615 9.69 9.69 39.55 2.66
5282 6170 6.413818 CACAATGGAAACTTGACGTAAAAGTC 59.586 38.462 14.55 5.51 36.87 3.01
5292 6180 5.209818 TGACGTAAAAGTCATGGTCTTCT 57.790 39.130 0.00 0.00 45.18 2.85
5293 6181 5.227908 TGACGTAAAAGTCATGGTCTTCTC 58.772 41.667 0.00 0.00 45.18 2.87
5294 6182 5.010719 TGACGTAAAAGTCATGGTCTTCTCT 59.989 40.000 0.00 0.00 45.18 3.10
5295 6183 5.230942 ACGTAAAAGTCATGGTCTTCTCTG 58.769 41.667 0.00 0.00 0.00 3.35
5296 6184 5.010719 ACGTAAAAGTCATGGTCTTCTCTGA 59.989 40.000 0.00 0.00 0.00 3.27
5297 6185 6.102663 CGTAAAAGTCATGGTCTTCTCTGAT 58.897 40.000 0.00 0.00 0.00 2.90
5298 6186 6.591834 CGTAAAAGTCATGGTCTTCTCTGATT 59.408 38.462 0.00 0.00 0.00 2.57
5299 6187 7.118390 CGTAAAAGTCATGGTCTTCTCTGATTT 59.882 37.037 0.00 0.00 0.00 2.17
5300 6188 7.830099 AAAAGTCATGGTCTTCTCTGATTTT 57.170 32.000 0.00 0.00 31.45 1.82
5301 6189 7.830099 AAAGTCATGGTCTTCTCTGATTTTT 57.170 32.000 0.00 0.00 27.26 1.94
5302 6190 6.814506 AGTCATGGTCTTCTCTGATTTTTG 57.185 37.500 0.00 0.00 0.00 2.44
5303 6191 6.537355 AGTCATGGTCTTCTCTGATTTTTGA 58.463 36.000 0.00 0.00 0.00 2.69
5304 6192 6.429385 AGTCATGGTCTTCTCTGATTTTTGAC 59.571 38.462 0.00 0.00 0.00 3.18
5305 6193 5.409520 TCATGGTCTTCTCTGATTTTTGACG 59.590 40.000 0.00 0.00 0.00 4.35
5306 6194 4.956085 TGGTCTTCTCTGATTTTTGACGA 58.044 39.130 0.00 0.00 0.00 4.20
5307 6195 5.364778 TGGTCTTCTCTGATTTTTGACGAA 58.635 37.500 0.00 0.00 0.00 3.85
5308 6196 5.820423 TGGTCTTCTCTGATTTTTGACGAAA 59.180 36.000 0.00 0.00 0.00 3.46
5309 6197 6.017934 TGGTCTTCTCTGATTTTTGACGAAAG 60.018 38.462 0.00 0.00 0.00 2.62
5310 6198 5.848559 GTCTTCTCTGATTTTTGACGAAAGC 59.151 40.000 0.00 0.00 0.00 3.51
5311 6199 4.389664 TCTCTGATTTTTGACGAAAGCG 57.610 40.909 0.00 0.00 44.79 4.68
5312 6200 4.055360 TCTCTGATTTTTGACGAAAGCGA 58.945 39.130 0.00 0.00 41.64 4.93
5313 6201 4.690748 TCTCTGATTTTTGACGAAAGCGAT 59.309 37.500 0.00 0.00 41.64 4.58
5314 6202 4.711721 TCTGATTTTTGACGAAAGCGATG 58.288 39.130 0.00 0.00 41.64 3.84
5315 6203 4.450757 TCTGATTTTTGACGAAAGCGATGA 59.549 37.500 0.00 0.00 41.64 2.92
5316 6204 5.122239 TCTGATTTTTGACGAAAGCGATGAT 59.878 36.000 0.00 0.00 41.64 2.45
5317 6205 5.698832 TGATTTTTGACGAAAGCGATGATT 58.301 33.333 0.00 0.00 41.64 2.57
5318 6206 6.148948 TGATTTTTGACGAAAGCGATGATTT 58.851 32.000 0.00 0.00 41.64 2.17
5319 6207 6.640499 TGATTTTTGACGAAAGCGATGATTTT 59.360 30.769 0.00 0.00 41.64 1.82
5320 6208 5.804449 TTTTGACGAAAGCGATGATTTTG 57.196 34.783 0.00 0.00 41.64 2.44
5321 6209 3.469899 TGACGAAAGCGATGATTTTGG 57.530 42.857 0.00 0.00 41.64 3.28
5322 6210 3.070748 TGACGAAAGCGATGATTTTGGA 58.929 40.909 0.00 0.00 41.64 3.53
5323 6211 3.125146 TGACGAAAGCGATGATTTTGGAG 59.875 43.478 0.00 0.00 41.64 3.86
5324 6212 3.074412 ACGAAAGCGATGATTTTGGAGT 58.926 40.909 0.00 0.00 41.64 3.85
5325 6213 4.250464 ACGAAAGCGATGATTTTGGAGTA 58.750 39.130 0.00 0.00 41.64 2.59
5326 6214 4.092968 ACGAAAGCGATGATTTTGGAGTAC 59.907 41.667 0.00 0.00 41.64 2.73
5327 6215 4.494199 CGAAAGCGATGATTTTGGAGTACC 60.494 45.833 0.00 0.00 40.82 3.34
5328 6216 2.919228 AGCGATGATTTTGGAGTACCC 58.081 47.619 0.00 0.00 34.81 3.69
5329 6217 2.505819 AGCGATGATTTTGGAGTACCCT 59.494 45.455 0.00 0.00 35.38 4.34
5330 6218 3.709653 AGCGATGATTTTGGAGTACCCTA 59.290 43.478 0.00 0.00 35.38 3.53
5331 6219 4.058817 GCGATGATTTTGGAGTACCCTAG 58.941 47.826 0.00 0.00 35.38 3.02
5332 6220 4.443034 GCGATGATTTTGGAGTACCCTAGT 60.443 45.833 0.00 0.00 35.38 2.57
5333 6221 5.290386 CGATGATTTTGGAGTACCCTAGTC 58.710 45.833 0.00 0.00 35.38 2.59
5334 6222 5.163447 CGATGATTTTGGAGTACCCTAGTCA 60.163 44.000 0.00 0.00 35.38 3.41
5335 6223 5.416271 TGATTTTGGAGTACCCTAGTCAC 57.584 43.478 0.00 0.00 35.38 3.67
5336 6224 4.841813 TGATTTTGGAGTACCCTAGTCACA 59.158 41.667 0.00 0.00 35.38 3.58
5337 6225 5.308497 TGATTTTGGAGTACCCTAGTCACAA 59.692 40.000 0.00 0.00 35.38 3.33
5338 6226 5.633655 TTTTGGAGTACCCTAGTCACAAA 57.366 39.130 0.00 0.00 35.38 2.83
5339 6227 5.836024 TTTGGAGTACCCTAGTCACAAAT 57.164 39.130 0.00 0.00 35.38 2.32
5340 6228 6.938698 TTTGGAGTACCCTAGTCACAAATA 57.061 37.500 0.00 0.00 35.38 1.40
5341 6229 7.504926 TTTGGAGTACCCTAGTCACAAATAT 57.495 36.000 0.00 0.00 35.38 1.28
5342 6230 8.612486 TTTGGAGTACCCTAGTCACAAATATA 57.388 34.615 0.00 0.00 35.38 0.86
5343 6231 8.612486 TTGGAGTACCCTAGTCACAAATATAA 57.388 34.615 0.00 0.00 35.38 0.98
5344 6232 8.792830 TGGAGTACCCTAGTCACAAATATAAT 57.207 34.615 0.00 0.00 35.38 1.28
5345 6233 8.647796 TGGAGTACCCTAGTCACAAATATAATG 58.352 37.037 0.00 0.00 35.38 1.90
5346 6234 8.867097 GGAGTACCCTAGTCACAAATATAATGA 58.133 37.037 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 8.533569 TTATGATTGTATCCCTCGATGCTATA 57.466 34.615 0.00 0.00 32.69 1.31
64 65 2.287849 TGTGTTGTGTTGGTTGTGTGTG 60.288 45.455 0.00 0.00 0.00 3.82
119 120 6.912591 GGTCTTGTATGACTTTGTCTTTTGTG 59.087 38.462 0.00 0.00 37.16 3.33
127 128 5.133221 AGCTTTGGTCTTGTATGACTTTGT 58.867 37.500 0.00 0.00 37.16 2.83
153 155 0.902531 TTTCTTCTTCCTCCGCCGAT 59.097 50.000 0.00 0.00 0.00 4.18
179 181 4.992951 GCCAATCTCTGTTTTCATTGCTTT 59.007 37.500 0.00 0.00 0.00 3.51
186 188 7.975616 GCTTTATATTGCCAATCTCTGTTTTCA 59.024 33.333 0.00 0.00 0.00 2.69
201 203 4.319766 CGGATGGTCACTGCTTTATATTGC 60.320 45.833 0.00 0.00 0.00 3.56
369 375 8.792830 ACACATAGCAGATACTTGTATTGTTT 57.207 30.769 0.00 0.00 0.00 2.83
431 437 5.547465 TGACTTTGACCAGATTTCGTATGT 58.453 37.500 0.00 0.00 0.00 2.29
436 442 5.424121 AGTTTGACTTTGACCAGATTTCG 57.576 39.130 0.00 0.00 0.00 3.46
650 656 4.918588 ACAATGTAGTCCCTCCGATTTTT 58.081 39.130 0.00 0.00 0.00 1.94
651 657 4.569719 ACAATGTAGTCCCTCCGATTTT 57.430 40.909 0.00 0.00 0.00 1.82
652 658 5.888982 ATACAATGTAGTCCCTCCGATTT 57.111 39.130 0.00 0.00 0.00 2.17
653 659 5.454755 CCAATACAATGTAGTCCCTCCGATT 60.455 44.000 0.00 0.00 0.00 3.34
654 660 4.040461 CCAATACAATGTAGTCCCTCCGAT 59.960 45.833 0.00 0.00 0.00 4.18
655 661 3.386726 CCAATACAATGTAGTCCCTCCGA 59.613 47.826 0.00 0.00 0.00 4.55
656 662 3.386726 TCCAATACAATGTAGTCCCTCCG 59.613 47.826 0.00 0.00 0.00 4.63
657 663 5.071788 TCATCCAATACAATGTAGTCCCTCC 59.928 44.000 0.00 0.00 0.00 4.30
658 664 6.174720 TCATCCAATACAATGTAGTCCCTC 57.825 41.667 0.00 0.00 0.00 4.30
659 665 5.072329 CCTCATCCAATACAATGTAGTCCCT 59.928 44.000 0.00 0.00 0.00 4.20
660 666 5.308825 CCTCATCCAATACAATGTAGTCCC 58.691 45.833 0.00 0.00 0.00 4.46
661 667 5.163195 ACCCTCATCCAATACAATGTAGTCC 60.163 44.000 0.00 0.00 0.00 3.85
662 668 5.930135 ACCCTCATCCAATACAATGTAGTC 58.070 41.667 0.00 0.00 0.00 2.59
663 669 5.975988 ACCCTCATCCAATACAATGTAGT 57.024 39.130 0.00 0.00 0.00 2.73
664 670 8.786898 CAAATACCCTCATCCAATACAATGTAG 58.213 37.037 0.00 0.00 0.00 2.74
719 725 1.282570 CAACATCCACCGTGCACAC 59.717 57.895 18.64 0.00 0.00 3.82
757 763 2.717639 AAGAAAGGTGCAGTCAGTGT 57.282 45.000 0.00 0.00 0.00 3.55
773 779 2.777692 GAGATGGTTGGGGATGGTAAGA 59.222 50.000 0.00 0.00 0.00 2.10
774 780 2.509548 TGAGATGGTTGGGGATGGTAAG 59.490 50.000 0.00 0.00 0.00 2.34
776 782 2.126882 CTGAGATGGTTGGGGATGGTA 58.873 52.381 0.00 0.00 0.00 3.25
777 783 0.921896 CTGAGATGGTTGGGGATGGT 59.078 55.000 0.00 0.00 0.00 3.55
837 843 2.601067 TCGGTTCAGTGGCGGGTA 60.601 61.111 0.00 0.00 0.00 3.69
918 928 0.250234 TCTCGTTCTGGGCTTGGATG 59.750 55.000 0.00 0.00 0.00 3.51
919 929 0.539051 CTCTCGTTCTGGGCTTGGAT 59.461 55.000 0.00 0.00 0.00 3.41
920 930 1.975327 CTCTCGTTCTGGGCTTGGA 59.025 57.895 0.00 0.00 0.00 3.53
921 931 1.743252 GCTCTCGTTCTGGGCTTGG 60.743 63.158 0.00 0.00 0.00 3.61
988 1040 2.496341 CGCCATTGCTCTCTCCGA 59.504 61.111 0.00 0.00 34.43 4.55
992 1044 1.519719 GTCTCCGCCATTGCTCTCT 59.480 57.895 0.00 0.00 34.43 3.10
999 1052 3.792053 GATCGCCGTCTCCGCCATT 62.792 63.158 0.00 0.00 0.00 3.16
1122 1175 2.100631 GTCGCGGATGAAGGTGTGG 61.101 63.158 6.13 0.00 0.00 4.17
1558 1615 4.287326 AGAAAGAAAAGAACCGGAGAGGAT 59.713 41.667 9.46 0.00 45.00 3.24
1575 1637 3.132111 GGTGGTTTTGGCTGAAAGAAAGA 59.868 43.478 0.00 0.00 34.07 2.52
1576 1638 3.118811 TGGTGGTTTTGGCTGAAAGAAAG 60.119 43.478 0.00 0.00 34.07 2.62
1577 1639 2.834549 TGGTGGTTTTGGCTGAAAGAAA 59.165 40.909 0.00 0.00 34.07 2.52
1578 1640 2.167487 GTGGTGGTTTTGGCTGAAAGAA 59.833 45.455 0.00 0.00 34.07 2.52
1579 1641 1.754226 GTGGTGGTTTTGGCTGAAAGA 59.246 47.619 0.00 0.00 34.07 2.52
1593 1655 1.197721 GTCTCTGATTTTGCGTGGTGG 59.802 52.381 0.00 0.00 0.00 4.61
1596 1658 4.944962 TTATGTCTCTGATTTTGCGTGG 57.055 40.909 0.00 0.00 0.00 4.94
1600 1662 8.668353 TGTTACTGATTATGTCTCTGATTTTGC 58.332 33.333 0.00 0.00 0.00 3.68
1626 1688 9.665264 GTTCGTATCTTTCAACTCTTCATTTTT 57.335 29.630 0.00 0.00 0.00 1.94
1631 1693 6.097915 AGGTTCGTATCTTTCAACTCTTCA 57.902 37.500 0.00 0.00 0.00 3.02
1658 1720 8.976986 ATCTCAGAACAAACAAATAATCAAGC 57.023 30.769 0.00 0.00 0.00 4.01
1664 1726 9.965824 GGAAGAAATCTCAGAACAAACAAATAA 57.034 29.630 0.00 0.00 0.00 1.40
1701 2457 4.386049 ACAAGACGAAGATAAAAGACAGCG 59.614 41.667 0.00 0.00 0.00 5.18
1788 2545 1.234821 ACATGCGTTCGGTGTCATTT 58.765 45.000 0.00 0.00 0.00 2.32
1789 2546 2.087501 TACATGCGTTCGGTGTCATT 57.912 45.000 0.00 0.00 0.00 2.57
1798 2555 8.006590 TGTTGCATTTTAATTTTACATGCGTTC 58.993 29.630 0.00 0.00 36.45 3.95
1839 2598 3.988379 TTGTTTAACTCAAGCAGGCAG 57.012 42.857 0.00 0.00 0.00 4.85
1856 2615 7.397221 TGACAATTCAGGAGAATCTACATTGT 58.603 34.615 8.79 8.79 43.52 2.71
1870 2629 6.506500 AATGAAGTAGCTTGACAATTCAGG 57.493 37.500 0.00 0.00 31.71 3.86
1907 2666 1.792367 TGTCATTTTCAGCGTGAGACG 59.208 47.619 0.00 0.00 45.88 4.18
1908 2667 3.433274 TGATGTCATTTTCAGCGTGAGAC 59.567 43.478 0.00 0.00 0.00 3.36
1952 2711 0.607217 TGGTTAGCTCCTCGACGACA 60.607 55.000 0.00 0.00 0.00 4.35
1954 2713 0.738975 CATGGTTAGCTCCTCGACGA 59.261 55.000 0.00 0.00 0.00 4.20
1956 2715 1.067821 CTCCATGGTTAGCTCCTCGAC 59.932 57.143 12.58 0.00 0.00 4.20
1957 2716 1.342076 ACTCCATGGTTAGCTCCTCGA 60.342 52.381 12.58 0.00 0.00 4.04
1958 2717 1.115467 ACTCCATGGTTAGCTCCTCG 58.885 55.000 12.58 0.00 0.00 4.63
1960 2719 2.043227 GCTACTCCATGGTTAGCTCCT 58.957 52.381 27.47 4.41 0.00 3.69
1961 2720 2.043227 AGCTACTCCATGGTTAGCTCC 58.957 52.381 29.89 13.90 39.65 4.70
1962 2721 3.305744 GCTAGCTACTCCATGGTTAGCTC 60.306 52.174 34.70 24.73 42.85 4.09
1974 2749 4.879104 TCTCGTTAACTGCTAGCTACTC 57.121 45.455 17.23 1.13 0.00 2.59
1975 2750 5.838531 AATCTCGTTAACTGCTAGCTACT 57.161 39.130 17.23 2.24 0.00 2.57
1976 2751 7.982371 TTAAATCTCGTTAACTGCTAGCTAC 57.018 36.000 17.23 5.50 0.00 3.58
1977 2752 8.410912 TGATTAAATCTCGTTAACTGCTAGCTA 58.589 33.333 17.23 1.31 0.00 3.32
1978 2753 7.222999 GTGATTAAATCTCGTTAACTGCTAGCT 59.777 37.037 17.23 0.00 0.00 3.32
1979 2754 7.222999 AGTGATTAAATCTCGTTAACTGCTAGC 59.777 37.037 8.10 8.10 0.00 3.42
1980 2755 8.535592 CAGTGATTAAATCTCGTTAACTGCTAG 58.464 37.037 3.71 0.00 0.00 3.42
1981 2756 7.010183 GCAGTGATTAAATCTCGTTAACTGCTA 59.990 37.037 14.78 0.00 37.48 3.49
1982 2757 6.183360 GCAGTGATTAAATCTCGTTAACTGCT 60.183 38.462 14.78 0.00 37.48 4.24
1983 2758 5.960105 GCAGTGATTAAATCTCGTTAACTGC 59.040 40.000 8.05 8.05 35.37 4.40
1984 2759 7.060600 TGCAGTGATTAAATCTCGTTAACTG 57.939 36.000 3.71 0.00 0.00 3.16
1985 2760 7.849804 ATGCAGTGATTAAATCTCGTTAACT 57.150 32.000 3.71 0.00 0.00 2.24
2041 2850 2.896685 CCCTGCACCCAAATTCACTAAA 59.103 45.455 0.00 0.00 0.00 1.85
2044 2853 0.482446 TCCCTGCACCCAAATTCACT 59.518 50.000 0.00 0.00 0.00 3.41
2055 2864 0.460987 CTTCCAGATCGTCCCTGCAC 60.461 60.000 0.00 0.00 0.00 4.57
2082 2891 2.126228 TACTTGCCGAAGCCGACG 60.126 61.111 0.00 0.00 38.69 5.12
2466 3275 4.379243 AGGCTGTTCCAGTCGGCG 62.379 66.667 0.00 0.00 41.46 6.46
2676 3485 5.014858 TCCTGGTAGTACCTTGACTTGTAG 58.985 45.833 20.07 5.81 39.58 2.74
2685 3494 2.299326 ACACGTCCTGGTAGTACCTT 57.701 50.000 20.07 0.00 39.58 3.50
2862 3671 1.349627 GAACGCCAGCGACATGATG 59.650 57.895 20.32 0.00 42.83 3.07
4367 5176 1.934956 CAGACGAACGCCGATCGAG 60.935 63.158 23.39 12.76 42.76 4.04
4372 5181 2.050714 GACACAGACGAACGCCGA 60.051 61.111 4.79 0.00 41.76 5.54
4391 5200 0.530744 CCTTCCTTGATCCGACGACA 59.469 55.000 0.00 0.00 0.00 4.35
4392 5201 0.815734 TCCTTCCTTGATCCGACGAC 59.184 55.000 0.00 0.00 0.00 4.34
4393 5202 1.103803 CTCCTTCCTTGATCCGACGA 58.896 55.000 0.00 0.00 0.00 4.20
4394 5203 1.103803 TCTCCTTCCTTGATCCGACG 58.896 55.000 0.00 0.00 0.00 5.12
4395 5204 2.159028 CCTTCTCCTTCCTTGATCCGAC 60.159 54.545 0.00 0.00 0.00 4.79
4564 5390 0.594602 CACGTAACCAGTGTCGGAGA 59.405 55.000 0.00 0.00 35.08 3.71
4586 5412 6.480981 CCAGTCCATATGAAAATTGCAATTCC 59.519 38.462 24.28 18.45 0.00 3.01
4610 5436 3.492421 TGTATACGACGGTGAGAAACC 57.508 47.619 0.00 0.00 46.60 3.27
4611 5437 6.968904 TCTATTTGTATACGACGGTGAGAAAC 59.031 38.462 0.00 0.00 0.00 2.78
4612 5438 7.087409 TCTATTTGTATACGACGGTGAGAAA 57.913 36.000 0.00 0.00 0.00 2.52
4613 5439 6.682423 TCTATTTGTATACGACGGTGAGAA 57.318 37.500 0.00 0.00 0.00 2.87
4614 5440 6.682423 TTCTATTTGTATACGACGGTGAGA 57.318 37.500 0.00 0.00 0.00 3.27
4615 5441 7.745022 TTTTCTATTTGTATACGACGGTGAG 57.255 36.000 0.00 0.00 0.00 3.51
4616 5442 7.598118 TGTTTTTCTATTTGTATACGACGGTGA 59.402 33.333 0.00 0.00 0.00 4.02
4617 5443 7.731720 TGTTTTTCTATTTGTATACGACGGTG 58.268 34.615 0.00 0.00 0.00 4.94
4618 5444 7.887996 TGTTTTTCTATTTGTATACGACGGT 57.112 32.000 0.00 0.00 0.00 4.83
4619 5445 9.763465 AAATGTTTTTCTATTTGTATACGACGG 57.237 29.630 0.00 0.00 0.00 4.79
4642 5468 8.866093 ACCTTACCACAGCTTAAAATACAAAAT 58.134 29.630 0.00 0.00 0.00 1.82
4643 5469 8.240267 ACCTTACCACAGCTTAAAATACAAAA 57.760 30.769 0.00 0.00 0.00 2.44
4644 5470 7.826918 ACCTTACCACAGCTTAAAATACAAA 57.173 32.000 0.00 0.00 0.00 2.83
4645 5471 7.826918 AACCTTACCACAGCTTAAAATACAA 57.173 32.000 0.00 0.00 0.00 2.41
4646 5472 7.826918 AAACCTTACCACAGCTTAAAATACA 57.173 32.000 0.00 0.00 0.00 2.29
4647 5473 9.188588 GAAAAACCTTACCACAGCTTAAAATAC 57.811 33.333 0.00 0.00 0.00 1.89
4648 5474 8.915036 TGAAAAACCTTACCACAGCTTAAAATA 58.085 29.630 0.00 0.00 0.00 1.40
4662 5488 2.028476 GGGTGCCCATGAAAAACCTTAC 60.028 50.000 1.66 0.00 35.81 2.34
4664 5490 1.055849 GGGTGCCCATGAAAAACCTT 58.944 50.000 1.66 0.00 35.81 3.50
4679 5505 2.033602 GACCGGGAGTTTGGGGTG 59.966 66.667 6.32 0.00 31.66 4.61
4680 5506 2.448931 TGACCGGGAGTTTGGGGT 60.449 61.111 6.32 0.00 34.94 4.95
4681 5507 2.351276 CTGACCGGGAGTTTGGGG 59.649 66.667 6.32 0.00 0.00 4.96
4682 5508 2.359975 GCTGACCGGGAGTTTGGG 60.360 66.667 6.32 0.00 0.00 4.12
4695 5568 1.982395 CAGTGACCGGGTAGGCTGA 60.982 63.158 6.32 0.00 46.52 4.26
4702 5575 2.561956 CGTGAGTCAGTGACCGGGT 61.562 63.158 19.71 0.00 32.18 5.28
4703 5576 2.258591 CGTGAGTCAGTGACCGGG 59.741 66.667 19.71 3.42 32.18 5.73
4713 5586 2.560896 GTGACAATTTTCGCGTGAGTC 58.439 47.619 5.77 8.02 0.00 3.36
4716 5589 3.719588 CGTGACAATTTTCGCGTGA 57.280 47.368 17.19 0.00 43.09 4.35
4721 5594 1.447938 GCTGTTGCGTGACAATTTTCG 59.552 47.619 0.00 0.00 41.27 3.46
4734 5607 3.578515 ATTTGCCAGCCGCTGTTGC 62.579 57.895 18.98 15.77 38.78 4.17
4739 5612 3.443045 CCGAATTTGCCAGCCGCT 61.443 61.111 0.00 0.00 38.78 5.52
4745 5618 1.967066 ACATTTGGACCGAATTTGCCA 59.033 42.857 3.99 0.00 0.00 4.92
4757 5630 2.617788 CCGGTCAATCTGGACATTTGGA 60.618 50.000 0.00 0.00 45.09 3.53
4771 5644 0.986019 ATATGGGGAGTGCCGGTCAA 60.986 55.000 1.90 0.00 33.83 3.18
4784 5657 1.141657 CATATCCGCCCCAGATATGGG 59.858 57.143 19.20 19.20 45.14 4.00
4785 5658 2.627515 CATATCCGCCCCAGATATGG 57.372 55.000 0.00 0.00 45.14 2.74
4787 5660 1.511613 CCCATATCCGCCCCAGATAT 58.488 55.000 0.00 0.00 37.40 1.63
4788 5661 0.620410 CCCCATATCCGCCCCAGATA 60.620 60.000 0.00 0.00 0.00 1.98
4789 5662 1.925455 CCCCATATCCGCCCCAGAT 60.925 63.158 0.00 0.00 0.00 2.90
4790 5663 2.529136 CCCCATATCCGCCCCAGA 60.529 66.667 0.00 0.00 0.00 3.86
4791 5664 2.529136 TCCCCATATCCGCCCCAG 60.529 66.667 0.00 0.00 0.00 4.45
4792 5665 2.852075 GTCCCCATATCCGCCCCA 60.852 66.667 0.00 0.00 0.00 4.96
4793 5666 4.016706 CGTCCCCATATCCGCCCC 62.017 72.222 0.00 0.00 0.00 5.80
4794 5667 4.699522 GCGTCCCCATATCCGCCC 62.700 72.222 0.00 0.00 40.25 6.13
4820 5693 4.814294 CAGTCCTACGTGGCGGGC 62.814 72.222 0.00 0.00 35.26 6.13
4821 5694 4.814294 GCAGTCCTACGTGGCGGG 62.814 72.222 0.00 0.00 35.26 6.13
4822 5695 3.989698 CTGCAGTCCTACGTGGCGG 62.990 68.421 5.25 0.00 35.26 6.13
4823 5696 2.507102 CTGCAGTCCTACGTGGCG 60.507 66.667 5.25 0.00 35.26 5.69
4824 5697 2.125512 CCTGCAGTCCTACGTGGC 60.126 66.667 13.81 0.00 35.26 5.01
4825 5698 1.215647 GTCCTGCAGTCCTACGTGG 59.784 63.158 13.81 0.00 37.10 4.94
4826 5699 0.109086 CAGTCCTGCAGTCCTACGTG 60.109 60.000 13.81 0.00 0.00 4.49
4827 5700 0.251209 TCAGTCCTGCAGTCCTACGT 60.251 55.000 13.81 0.00 0.00 3.57
4828 5701 0.171455 GTCAGTCCTGCAGTCCTACG 59.829 60.000 13.81 0.00 0.00 3.51
4829 5702 0.533032 GGTCAGTCCTGCAGTCCTAC 59.467 60.000 13.81 5.36 0.00 3.18
4830 5703 0.965866 CGGTCAGTCCTGCAGTCCTA 60.966 60.000 13.81 0.00 0.00 2.94
4831 5704 2.279069 CGGTCAGTCCTGCAGTCCT 61.279 63.158 13.81 4.67 0.00 3.85
4832 5705 2.262915 CGGTCAGTCCTGCAGTCC 59.737 66.667 13.81 2.06 0.00 3.85
4833 5706 1.595993 TAGCGGTCAGTCCTGCAGTC 61.596 60.000 13.81 5.49 37.88 3.51
4834 5707 1.599606 CTAGCGGTCAGTCCTGCAGT 61.600 60.000 13.81 0.00 37.88 4.40
4835 5708 1.140589 CTAGCGGTCAGTCCTGCAG 59.859 63.158 6.78 6.78 37.88 4.41
4836 5709 2.351244 CCTAGCGGTCAGTCCTGCA 61.351 63.158 0.00 0.00 37.88 4.41
4837 5710 2.496817 CCTAGCGGTCAGTCCTGC 59.503 66.667 0.00 0.00 36.51 4.85
4838 5711 3.082579 GCCCTAGCGGTCAGTCCTG 62.083 68.421 0.00 0.00 0.00 3.86
4839 5712 2.760385 GCCCTAGCGGTCAGTCCT 60.760 66.667 0.00 0.00 0.00 3.85
4840 5713 3.075005 TGCCCTAGCGGTCAGTCC 61.075 66.667 0.00 0.00 44.31 3.85
4841 5714 2.184579 GTGCCCTAGCGGTCAGTC 59.815 66.667 0.00 0.00 44.31 3.51
4842 5715 3.760035 CGTGCCCTAGCGGTCAGT 61.760 66.667 0.00 0.00 44.31 3.41
4855 5728 4.811761 GGACGAATTGGCGCGTGC 62.812 66.667 13.78 13.78 41.34 5.34
4856 5729 1.425267 TATGGACGAATTGGCGCGTG 61.425 55.000 8.43 0.00 41.34 5.34
4857 5730 0.531974 ATATGGACGAATTGGCGCGT 60.532 50.000 8.43 0.00 44.33 6.01
4858 5731 0.163788 GATATGGACGAATTGGCGCG 59.836 55.000 0.00 0.00 33.86 6.86
4859 5732 0.517316 GGATATGGACGAATTGGCGC 59.483 55.000 0.00 0.00 33.86 6.53
4879 5752 4.191015 GAAGGGGATGGCGGGGAC 62.191 72.222 0.00 0.00 0.00 4.46
4889 5762 3.327404 GTCGGGCAAGGAAGGGGA 61.327 66.667 0.00 0.00 0.00 4.81
4892 5765 2.045926 CTGGTCGGGCAAGGAAGG 60.046 66.667 0.00 0.00 0.00 3.46
4894 5767 4.344865 GGCTGGTCGGGCAAGGAA 62.345 66.667 0.00 0.00 0.00 3.36
4898 5771 4.344865 GAAGGGCTGGTCGGGCAA 62.345 66.667 5.72 0.00 0.00 4.52
4900 5773 3.978571 GAAGAAGGGCTGGTCGGGC 62.979 68.421 0.00 0.00 0.00 6.13
4909 5796 3.755905 CCAAAAGAGAAGAGAAGAAGGGC 59.244 47.826 0.00 0.00 0.00 5.19
4917 5804 1.971357 ACGAGGCCAAAAGAGAAGAGA 59.029 47.619 5.01 0.00 0.00 3.10
4949 5836 2.740826 GCGGCTAAACTGCGGTGA 60.741 61.111 0.00 0.00 41.87 4.02
4955 5842 1.534595 GCAATGATGGCGGCTAAACTG 60.535 52.381 11.43 3.58 0.00 3.16
4961 5848 2.517875 GGAGCAATGATGGCGGCT 60.518 61.111 11.43 0.00 39.75 5.52
4979 5866 0.877071 CCTGTGTTGTGGATGACAGC 59.123 55.000 0.00 0.00 35.44 4.40
4981 5868 0.537143 GCCCTGTGTTGTGGATGACA 60.537 55.000 0.00 0.00 0.00 3.58
5021 5908 4.947147 GGTTGGCAGCGGTGTGGA 62.947 66.667 17.07 0.00 0.00 4.02
5031 5918 1.018752 CGATCACGTCATGGTTGGCA 61.019 55.000 0.00 0.00 34.56 4.92
5032 5919 0.739462 TCGATCACGTCATGGTTGGC 60.739 55.000 0.00 0.00 40.69 4.52
5035 5922 2.959507 TGATCGATCACGTCATGGTT 57.040 45.000 23.99 0.00 40.69 3.67
5039 5926 2.541794 CGACCTTGATCGATCACGTCAT 60.542 50.000 33.13 20.21 45.13 3.06
5042 5929 0.809385 ACGACCTTGATCGATCACGT 59.191 50.000 27.28 26.89 45.13 4.49
5046 5933 0.935366 GGCGACGACCTTGATCGATC 60.935 60.000 18.72 18.72 45.13 3.69
5048 5935 2.337246 TGGCGACGACCTTGATCGA 61.337 57.895 0.00 0.00 45.13 3.59
5051 5938 2.264794 GGTGGCGACGACCTTGAT 59.735 61.111 0.00 0.00 0.00 2.57
5070 5957 4.825252 ACGTATTGGGGCGGCGTC 62.825 66.667 9.37 5.57 0.00 5.19
5071 5958 4.825252 GACGTATTGGGGCGGCGT 62.825 66.667 9.37 0.00 38.55 5.68
5073 5960 3.980442 TTGGACGTATTGGGGCGGC 62.980 63.158 0.00 0.00 35.00 6.53
5074 5961 2.110352 GTTGGACGTATTGGGGCGG 61.110 63.158 0.00 0.00 0.00 6.13
5075 5962 1.078708 AGTTGGACGTATTGGGGCG 60.079 57.895 0.00 0.00 0.00 6.13
5076 5963 0.035820 TGAGTTGGACGTATTGGGGC 60.036 55.000 0.00 0.00 0.00 5.80
5077 5964 2.561569 GATGAGTTGGACGTATTGGGG 58.438 52.381 0.00 0.00 0.00 4.96
5078 5965 2.561569 GGATGAGTTGGACGTATTGGG 58.438 52.381 0.00 0.00 0.00 4.12
5079 5966 2.201732 CGGATGAGTTGGACGTATTGG 58.798 52.381 0.00 0.00 0.00 3.16
5080 5967 2.888594 ACGGATGAGTTGGACGTATTG 58.111 47.619 0.00 0.00 35.85 1.90
5081 5968 4.931661 ATACGGATGAGTTGGACGTATT 57.068 40.909 0.00 0.00 45.18 1.89
5096 5983 2.810274 GAGTGCGAGGTGTATATACGGA 59.190 50.000 8.33 0.00 0.00 4.69
5097 5984 2.812591 AGAGTGCGAGGTGTATATACGG 59.187 50.000 8.33 0.00 0.00 4.02
5099 5986 5.936686 TGTAGAGTGCGAGGTGTATATAC 57.063 43.478 5.89 5.89 0.00 1.47
5113 6000 7.246311 GGACATTTCATCAAACATGTAGAGTG 58.754 38.462 0.00 0.00 0.00 3.51
5114 6001 6.092670 CGGACATTTCATCAAACATGTAGAGT 59.907 38.462 0.00 0.00 0.00 3.24
5120 6007 4.100529 GCTCGGACATTTCATCAAACATG 58.899 43.478 0.00 0.00 0.00 3.21
5121 6008 3.129287 GGCTCGGACATTTCATCAAACAT 59.871 43.478 0.00 0.00 0.00 2.71
5124 6011 2.749076 CTGGCTCGGACATTTCATCAAA 59.251 45.455 0.00 0.00 0.00 2.69
5126 6013 1.554617 TCTGGCTCGGACATTTCATCA 59.445 47.619 0.00 0.00 0.00 3.07
5127 6014 2.315925 TCTGGCTCGGACATTTCATC 57.684 50.000 0.00 0.00 0.00 2.92
5137 6024 5.220931 CCAAGAGAATAAAAATCTGGCTCGG 60.221 44.000 0.00 0.00 0.00 4.63
5138 6025 5.355350 ACCAAGAGAATAAAAATCTGGCTCG 59.645 40.000 0.00 0.00 0.00 5.03
5157 6044 8.765219 CATCGGTTTACTAGAATAATGACCAAG 58.235 37.037 0.00 0.00 0.00 3.61
5180 6068 1.003545 CCATTGCACGACGAATCCATC 60.004 52.381 0.00 0.00 0.00 3.51
5187 6075 1.502990 CCAACACCATTGCACGACGA 61.503 55.000 0.00 0.00 0.00 4.20
5189 6077 0.238289 CTCCAACACCATTGCACGAC 59.762 55.000 0.00 0.00 0.00 4.34
5192 6080 1.539827 GGTACTCCAACACCATTGCAC 59.460 52.381 0.00 0.00 34.77 4.57
5195 6083 2.879103 AGGGTACTCCAACACCATTG 57.121 50.000 0.00 0.00 36.48 2.82
5203 6091 3.975312 TCACTTTGGTTAGGGTACTCCAA 59.025 43.478 0.00 0.00 38.04 3.53
5204 6092 3.325716 GTCACTTTGGTTAGGGTACTCCA 59.674 47.826 0.00 0.00 38.24 3.86
5205 6093 3.615834 CGTCACTTTGGTTAGGGTACTCC 60.616 52.174 0.00 0.00 0.00 3.85
5206 6094 3.582780 CGTCACTTTGGTTAGGGTACTC 58.417 50.000 0.00 0.00 0.00 2.59
5207 6095 2.289257 GCGTCACTTTGGTTAGGGTACT 60.289 50.000 0.00 0.00 0.00 2.73
5208 6096 2.071540 GCGTCACTTTGGTTAGGGTAC 58.928 52.381 0.00 0.00 0.00 3.34
5209 6097 1.693062 TGCGTCACTTTGGTTAGGGTA 59.307 47.619 0.00 0.00 0.00 3.69
5210 6098 0.470766 TGCGTCACTTTGGTTAGGGT 59.529 50.000 0.00 0.00 0.00 4.34
5211 6099 1.600023 TTGCGTCACTTTGGTTAGGG 58.400 50.000 0.00 0.00 0.00 3.53
5212 6100 3.066203 ACTTTTGCGTCACTTTGGTTAGG 59.934 43.478 0.00 0.00 0.00 2.69
5213 6101 4.035017 CACTTTTGCGTCACTTTGGTTAG 58.965 43.478 0.00 0.00 0.00 2.34
5214 6102 3.690139 TCACTTTTGCGTCACTTTGGTTA 59.310 39.130 0.00 0.00 0.00 2.85
5215 6103 2.490115 TCACTTTTGCGTCACTTTGGTT 59.510 40.909 0.00 0.00 0.00 3.67
5216 6104 2.088423 TCACTTTTGCGTCACTTTGGT 58.912 42.857 0.00 0.00 0.00 3.67
5217 6105 2.450160 GTCACTTTTGCGTCACTTTGG 58.550 47.619 0.00 0.00 0.00 3.28
5218 6106 2.101125 CGTCACTTTTGCGTCACTTTG 58.899 47.619 0.00 0.00 0.00 2.77
5219 6107 1.063469 CCGTCACTTTTGCGTCACTTT 59.937 47.619 0.00 0.00 0.00 2.66
5220 6108 0.655733 CCGTCACTTTTGCGTCACTT 59.344 50.000 0.00 0.00 0.00 3.16
5221 6109 0.461339 ACCGTCACTTTTGCGTCACT 60.461 50.000 0.00 0.00 0.00 3.41
5222 6110 0.042448 GACCGTCACTTTTGCGTCAC 60.042 55.000 0.00 0.00 0.00 3.67
5223 6111 0.179094 AGACCGTCACTTTTGCGTCA 60.179 50.000 0.40 0.00 0.00 4.35
5224 6112 0.935196 AAGACCGTCACTTTTGCGTC 59.065 50.000 0.40 0.00 0.00 5.19
5225 6113 0.935196 GAAGACCGTCACTTTTGCGT 59.065 50.000 0.40 0.00 0.00 5.24
5226 6114 1.217882 AGAAGACCGTCACTTTTGCG 58.782 50.000 0.40 0.00 0.00 4.85
5227 6115 3.994392 TCATAGAAGACCGTCACTTTTGC 59.006 43.478 0.40 0.00 0.00 3.68
5228 6116 6.727824 AATCATAGAAGACCGTCACTTTTG 57.272 37.500 0.40 2.77 0.00 2.44
5229 6117 7.444183 TGAAAATCATAGAAGACCGTCACTTTT 59.556 33.333 0.40 0.00 0.00 2.27
5230 6118 6.934645 TGAAAATCATAGAAGACCGTCACTTT 59.065 34.615 0.40 0.00 0.00 2.66
5231 6119 6.464222 TGAAAATCATAGAAGACCGTCACTT 58.536 36.000 0.40 0.00 0.00 3.16
5232 6120 6.037786 TGAAAATCATAGAAGACCGTCACT 57.962 37.500 0.40 2.71 0.00 3.41
5233 6121 6.147164 TGTTGAAAATCATAGAAGACCGTCAC 59.853 38.462 0.40 0.00 0.00 3.67
5234 6122 6.147164 GTGTTGAAAATCATAGAAGACCGTCA 59.853 38.462 0.40 0.00 0.00 4.35
5235 6123 6.147164 TGTGTTGAAAATCATAGAAGACCGTC 59.853 38.462 0.00 0.00 0.00 4.79
5236 6124 5.995282 TGTGTTGAAAATCATAGAAGACCGT 59.005 36.000 0.00 0.00 0.00 4.83
5237 6125 6.480524 TGTGTTGAAAATCATAGAAGACCG 57.519 37.500 0.00 0.00 0.00 4.79
5238 6126 7.756722 CCATTGTGTTGAAAATCATAGAAGACC 59.243 37.037 0.00 0.00 0.00 3.85
5239 6127 8.514594 TCCATTGTGTTGAAAATCATAGAAGAC 58.485 33.333 0.00 0.00 0.00 3.01
5240 6128 8.634335 TCCATTGTGTTGAAAATCATAGAAGA 57.366 30.769 0.00 0.00 0.00 2.87
5241 6129 9.695526 TTTCCATTGTGTTGAAAATCATAGAAG 57.304 29.630 0.00 0.00 0.00 2.85
5242 6130 9.474920 GTTTCCATTGTGTTGAAAATCATAGAA 57.525 29.630 0.00 0.00 30.47 2.10
5243 6131 8.859090 AGTTTCCATTGTGTTGAAAATCATAGA 58.141 29.630 0.00 0.00 30.47 1.98
5244 6132 9.480053 AAGTTTCCATTGTGTTGAAAATCATAG 57.520 29.630 0.00 0.00 30.47 2.23
5245 6133 9.258826 CAAGTTTCCATTGTGTTGAAAATCATA 57.741 29.630 0.00 0.00 30.47 2.15
5246 6134 7.986320 TCAAGTTTCCATTGTGTTGAAAATCAT 59.014 29.630 0.00 0.00 30.47 2.45
5247 6135 7.277539 GTCAAGTTTCCATTGTGTTGAAAATCA 59.722 33.333 0.00 0.00 30.47 2.57
5248 6136 7.515059 CGTCAAGTTTCCATTGTGTTGAAAATC 60.515 37.037 0.00 0.00 30.47 2.17
5249 6137 6.255453 CGTCAAGTTTCCATTGTGTTGAAAAT 59.745 34.615 0.00 0.00 30.47 1.82
5250 6138 5.574830 CGTCAAGTTTCCATTGTGTTGAAAA 59.425 36.000 0.00 0.00 30.47 2.29
5251 6139 5.098893 CGTCAAGTTTCCATTGTGTTGAAA 58.901 37.500 0.00 0.00 0.00 2.69
5252 6140 4.156922 ACGTCAAGTTTCCATTGTGTTGAA 59.843 37.500 0.00 0.00 0.00 2.69
5253 6141 3.692101 ACGTCAAGTTTCCATTGTGTTGA 59.308 39.130 0.00 0.00 0.00 3.18
5254 6142 4.027572 ACGTCAAGTTTCCATTGTGTTG 57.972 40.909 0.00 0.00 0.00 3.33
5255 6143 5.821516 TTACGTCAAGTTTCCATTGTGTT 57.178 34.783 0.00 0.00 0.00 3.32
5256 6144 5.821516 TTTACGTCAAGTTTCCATTGTGT 57.178 34.783 0.00 0.00 0.00 3.72
5257 6145 6.262601 ACTTTTACGTCAAGTTTCCATTGTG 58.737 36.000 7.14 0.00 29.75 3.33
5258 6146 6.094325 TGACTTTTACGTCAAGTTTCCATTGT 59.906 34.615 12.91 0.00 40.69 2.71
5259 6147 6.491394 TGACTTTTACGTCAAGTTTCCATTG 58.509 36.000 12.91 0.00 40.69 2.82
5260 6148 6.687081 TGACTTTTACGTCAAGTTTCCATT 57.313 33.333 12.91 0.00 40.69 3.16
5261 6149 6.293955 CCATGACTTTTACGTCAAGTTTCCAT 60.294 38.462 12.91 9.68 46.00 3.41
5262 6150 5.008217 CCATGACTTTTACGTCAAGTTTCCA 59.992 40.000 12.91 8.14 46.00 3.53
5263 6151 5.008316 ACCATGACTTTTACGTCAAGTTTCC 59.992 40.000 12.91 3.59 46.00 3.13
5264 6152 6.018180 AGACCATGACTTTTACGTCAAGTTTC 60.018 38.462 12.91 4.17 46.00 2.78
5265 6153 5.820947 AGACCATGACTTTTACGTCAAGTTT 59.179 36.000 12.91 3.76 46.00 2.66
5266 6154 5.365619 AGACCATGACTTTTACGTCAAGTT 58.634 37.500 12.91 0.00 46.00 2.66
5267 6155 4.957296 AGACCATGACTTTTACGTCAAGT 58.043 39.130 11.81 11.81 46.00 3.16
5268 6156 5.696724 AGAAGACCATGACTTTTACGTCAAG 59.303 40.000 0.00 0.00 46.00 3.02
5269 6157 5.607477 AGAAGACCATGACTTTTACGTCAA 58.393 37.500 0.00 0.00 46.00 3.18
5270 6158 5.010719 AGAGAAGACCATGACTTTTACGTCA 59.989 40.000 0.00 0.00 46.82 4.35
5271 6159 5.346281 CAGAGAAGACCATGACTTTTACGTC 59.654 44.000 0.00 0.00 34.52 4.34
5272 6160 5.010719 TCAGAGAAGACCATGACTTTTACGT 59.989 40.000 0.00 0.00 0.00 3.57
5273 6161 5.470368 TCAGAGAAGACCATGACTTTTACG 58.530 41.667 0.00 0.00 0.00 3.18
5274 6162 7.913674 AATCAGAGAAGACCATGACTTTTAC 57.086 36.000 0.00 0.00 0.00 2.01
5275 6163 8.924511 AAAATCAGAGAAGACCATGACTTTTA 57.075 30.769 0.00 0.00 0.00 1.52
5276 6164 7.830099 AAAATCAGAGAAGACCATGACTTTT 57.170 32.000 0.00 0.00 0.00 2.27
5277 6165 7.503566 TCAAAAATCAGAGAAGACCATGACTTT 59.496 33.333 0.00 0.00 0.00 2.66
5278 6166 7.000472 TCAAAAATCAGAGAAGACCATGACTT 59.000 34.615 0.00 0.00 0.00 3.01
5279 6167 6.429385 GTCAAAAATCAGAGAAGACCATGACT 59.571 38.462 0.00 0.00 31.94 3.41
5280 6168 6.606768 GTCAAAAATCAGAGAAGACCATGAC 58.393 40.000 0.00 0.00 0.00 3.06
5281 6169 5.409520 CGTCAAAAATCAGAGAAGACCATGA 59.590 40.000 0.00 0.00 0.00 3.07
5282 6170 5.409520 TCGTCAAAAATCAGAGAAGACCATG 59.590 40.000 0.00 0.00 0.00 3.66
5283 6171 5.551233 TCGTCAAAAATCAGAGAAGACCAT 58.449 37.500 0.00 0.00 0.00 3.55
5284 6172 4.956085 TCGTCAAAAATCAGAGAAGACCA 58.044 39.130 0.00 0.00 0.00 4.02
5285 6173 5.924475 TTCGTCAAAAATCAGAGAAGACC 57.076 39.130 0.00 0.00 0.00 3.85
5286 6174 5.848559 GCTTTCGTCAAAAATCAGAGAAGAC 59.151 40.000 0.00 0.00 0.00 3.01
5287 6175 5.333339 CGCTTTCGTCAAAAATCAGAGAAGA 60.333 40.000 0.00 0.00 0.00 2.87
5288 6176 4.842911 CGCTTTCGTCAAAAATCAGAGAAG 59.157 41.667 0.00 0.00 0.00 2.85
5289 6177 4.509970 TCGCTTTCGTCAAAAATCAGAGAA 59.490 37.500 0.00 0.00 36.96 2.87
5290 6178 4.055360 TCGCTTTCGTCAAAAATCAGAGA 58.945 39.130 0.00 0.00 36.96 3.10
5291 6179 4.389664 TCGCTTTCGTCAAAAATCAGAG 57.610 40.909 0.00 0.00 36.96 3.35
5292 6180 4.450757 TCATCGCTTTCGTCAAAAATCAGA 59.549 37.500 0.00 0.00 36.96 3.27
5293 6181 4.711721 TCATCGCTTTCGTCAAAAATCAG 58.288 39.130 0.00 0.00 36.96 2.90
5294 6182 4.740741 TCATCGCTTTCGTCAAAAATCA 57.259 36.364 0.00 0.00 36.96 2.57
5295 6183 6.617289 AAATCATCGCTTTCGTCAAAAATC 57.383 33.333 0.00 0.00 36.96 2.17
5296 6184 6.128849 CCAAAATCATCGCTTTCGTCAAAAAT 60.129 34.615 0.00 0.00 36.96 1.82
5297 6185 5.174761 CCAAAATCATCGCTTTCGTCAAAAA 59.825 36.000 0.00 0.00 36.96 1.94
5298 6186 4.679197 CCAAAATCATCGCTTTCGTCAAAA 59.321 37.500 0.00 0.00 36.96 2.44
5299 6187 4.023622 TCCAAAATCATCGCTTTCGTCAAA 60.024 37.500 0.00 0.00 36.96 2.69
5300 6188 3.500299 TCCAAAATCATCGCTTTCGTCAA 59.500 39.130 0.00 0.00 36.96 3.18
5301 6189 3.070748 TCCAAAATCATCGCTTTCGTCA 58.929 40.909 0.00 0.00 36.96 4.35
5302 6190 3.125316 ACTCCAAAATCATCGCTTTCGTC 59.875 43.478 0.00 0.00 36.96 4.20
5303 6191 3.074412 ACTCCAAAATCATCGCTTTCGT 58.926 40.909 0.00 0.00 36.96 3.85
5304 6192 3.747099 ACTCCAAAATCATCGCTTTCG 57.253 42.857 0.00 0.00 0.00 3.46
5305 6193 4.201920 GGGTACTCCAAAATCATCGCTTTC 60.202 45.833 0.00 0.00 35.00 2.62
5306 6194 3.694566 GGGTACTCCAAAATCATCGCTTT 59.305 43.478 0.00 0.00 35.00 3.51
5307 6195 3.054361 AGGGTACTCCAAAATCATCGCTT 60.054 43.478 0.00 0.00 38.24 4.68
5308 6196 2.505819 AGGGTACTCCAAAATCATCGCT 59.494 45.455 0.00 0.00 38.24 4.93
5309 6197 2.919228 AGGGTACTCCAAAATCATCGC 58.081 47.619 0.00 0.00 38.24 4.58
5310 6198 5.163447 TGACTAGGGTACTCCAAAATCATCG 60.163 44.000 0.00 0.00 38.24 3.84
5311 6199 6.049790 GTGACTAGGGTACTCCAAAATCATC 58.950 44.000 0.00 0.00 38.24 2.92
5312 6200 5.487488 TGTGACTAGGGTACTCCAAAATCAT 59.513 40.000 0.00 0.00 38.24 2.45
5313 6201 4.841813 TGTGACTAGGGTACTCCAAAATCA 59.158 41.667 0.00 0.00 38.24 2.57
5314 6202 5.416271 TGTGACTAGGGTACTCCAAAATC 57.584 43.478 0.00 0.00 38.24 2.17
5315 6203 5.836024 TTGTGACTAGGGTACTCCAAAAT 57.164 39.130 0.00 0.00 38.24 1.82
5316 6204 5.633655 TTTGTGACTAGGGTACTCCAAAA 57.366 39.130 0.00 0.00 38.24 2.44
5317 6205 5.836024 ATTTGTGACTAGGGTACTCCAAA 57.164 39.130 0.00 0.00 38.24 3.28
5318 6206 8.612486 TTATATTTGTGACTAGGGTACTCCAA 57.388 34.615 0.00 0.00 38.24 3.53
5319 6207 8.647796 CATTATATTTGTGACTAGGGTACTCCA 58.352 37.037 0.00 0.00 38.24 3.86
5320 6208 8.867097 TCATTATATTTGTGACTAGGGTACTCC 58.133 37.037 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.