Multiple sequence alignment - TraesCS3A01G436000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G436000 chr3A 100.000 5786 0 0 1 5786 679651281 679645496 0.000000e+00 10685.0
1 TraesCS3A01G436000 chr3B 88.583 2794 193 55 774 3532 718782262 718779560 0.000000e+00 3277.0
2 TraesCS3A01G436000 chr3B 89.687 2201 116 54 3529 5681 718779506 718777369 0.000000e+00 2704.0
3 TraesCS3A01G436000 chr3D 91.586 1557 89 19 2034 3566 542995143 542993605 0.000000e+00 2111.0
4 TraesCS3A01G436000 chr3D 92.609 1326 57 26 3559 4869 542993496 542992197 0.000000e+00 1868.0
5 TraesCS3A01G436000 chr3D 85.439 1140 101 20 312 1403 542996733 542995611 0.000000e+00 1125.0
6 TraesCS3A01G436000 chr3D 87.005 631 41 18 4931 5552 542988865 542988267 0.000000e+00 673.0
7 TraesCS3A01G436000 chr3D 87.982 441 46 4 1434 1871 542995612 542995176 1.110000e-141 514.0
8 TraesCS3A01G436000 chr3D 82.902 579 80 14 1759 2330 610730540 610729974 2.410000e-138 503.0
9 TraesCS3A01G436000 chr3D 81.452 620 90 16 1759 2364 29686324 29685716 8.720000e-133 484.0
10 TraesCS3A01G436000 chr3D 87.097 93 5 5 5700 5785 542837006 542836914 1.330000e-16 99.0
11 TraesCS3A01G436000 chr3D 90.411 73 5 1 5541 5613 542850430 542850360 1.720000e-15 95.3
12 TraesCS3A01G436000 chr7D 82.553 619 90 14 1759 2364 595977341 595976728 3.970000e-146 529.0
13 TraesCS3A01G436000 chr1B 79.763 761 110 32 2630 3359 673849202 673849949 4.000000e-141 512.0
14 TraesCS3A01G436000 chr1B 80.702 456 71 13 4022 4469 673850526 673850972 7.180000e-89 339.0
15 TraesCS3A01G436000 chr1B 86.992 123 13 3 4510 4629 673851050 673851172 1.010000e-27 135.0
16 TraesCS3A01G436000 chr5D 81.862 623 89 16 1759 2364 529529420 529528805 2.410000e-138 503.0
17 TraesCS3A01G436000 chr1D 80.730 685 94 23 2630 3287 483673861 483674534 3.110000e-137 499.0
18 TraesCS3A01G436000 chr1D 80.693 606 75 27 2057 2631 483672721 483673315 3.200000e-117 433.0
19 TraesCS3A01G436000 chr1D 81.903 431 67 11 339 763 379129983 379129558 2.560000e-93 353.0
20 TraesCS3A01G436000 chr1D 80.405 444 71 13 4022 4459 483675279 483675712 2.010000e-84 324.0
21 TraesCS3A01G436000 chr1D 85.366 123 15 1 4510 4629 483675800 483675922 2.190000e-24 124.0
22 TraesCS3A01G436000 chr1A 78.723 752 114 30 2635 3359 580494194 580494926 1.470000e-125 460.0
23 TraesCS3A01G436000 chr1A 80.044 451 70 15 4018 4459 580495756 580496195 3.360000e-82 316.0
24 TraesCS3A01G436000 chr1A 86.179 123 14 1 4510 4629 580496283 580496405 4.710000e-26 130.0
25 TraesCS3A01G436000 chr6A 87.948 307 32 4 2038 2342 53447453 53447150 1.980000e-94 357.0
26 TraesCS3A01G436000 chr6A 89.873 158 11 2 148 300 30718466 30718623 1.270000e-46 198.0
27 TraesCS3A01G436000 chr6A 94.444 36 2 0 5583 5618 405660904 405660939 8.100000e-04 56.5
28 TraesCS3A01G436000 chr4B 80.331 483 82 9 1724 2196 54639775 54639296 2.560000e-93 353.0
29 TraesCS3A01G436000 chr2D 80.000 470 81 11 302 763 476278952 476279416 9.290000e-88 335.0
30 TraesCS3A01G436000 chr2D 80.086 467 78 13 302 763 324286797 324287253 3.340000e-87 333.0
31 TraesCS3A01G436000 chr2D 92.029 138 11 0 150 287 515383295 515383432 1.650000e-45 195.0
32 TraesCS3A01G436000 chr2A 79.583 480 85 12 298 769 14936941 14937415 1.200000e-86 331.0
33 TraesCS3A01G436000 chr2A 79.176 461 83 12 307 762 751521457 751521005 2.030000e-79 307.0
34 TraesCS3A01G436000 chr2B 80.420 429 74 9 339 761 73957238 73956814 9.360000e-83 318.0
35 TraesCS3A01G436000 chr2B 80.184 434 75 11 339 764 629488249 629488679 1.210000e-81 315.0
36 TraesCS3A01G436000 chr2B 78.947 475 77 21 302 770 746079652 746079195 9.420000e-78 302.0
37 TraesCS3A01G436000 chr2B 90.728 151 14 0 148 298 548773757 548773607 9.830000e-48 202.0
38 TraesCS3A01G436000 chr2B 90.000 150 15 0 149 298 278905667 278905816 1.650000e-45 195.0
39 TraesCS3A01G436000 chr2B 89.404 151 15 1 148 298 476559630 476559481 7.650000e-44 189.0
40 TraesCS3A01G436000 chr4A 78.632 468 88 12 302 763 714908169 714907708 3.390000e-77 300.0
41 TraesCS3A01G436000 chr5B 89.308 159 15 2 144 302 478502445 478502601 1.270000e-46 198.0
42 TraesCS3A01G436000 chr5B 88.816 152 17 0 149 300 449000577 449000728 2.750000e-43 187.0
43 TraesCS3A01G436000 chr5B 88.742 151 17 0 148 298 485871586 485871436 9.900000e-43 185.0
44 TraesCS3A01G436000 chr5B 94.444 36 2 0 5583 5618 1418340 1418375 8.100000e-04 56.5
45 TraesCS3A01G436000 chrUn 90.066 151 15 0 150 300 52138902 52139052 4.570000e-46 196.0
46 TraesCS3A01G436000 chr7B 94.872 39 2 0 5583 5621 92313781 92313819 1.740000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G436000 chr3A 679645496 679651281 5785 True 10685.000000 10685 100.000000 1 5786 1 chr3A.!!$R1 5785
1 TraesCS3A01G436000 chr3B 718777369 718782262 4893 True 2990.500000 3277 89.135000 774 5681 2 chr3B.!!$R1 4907
2 TraesCS3A01G436000 chr3D 542988267 542996733 8466 True 1258.200000 2111 88.924200 312 5552 5 chr3D.!!$R5 5240
3 TraesCS3A01G436000 chr3D 610729974 610730540 566 True 503.000000 503 82.902000 1759 2330 1 chr3D.!!$R4 571
4 TraesCS3A01G436000 chr3D 29685716 29686324 608 True 484.000000 484 81.452000 1759 2364 1 chr3D.!!$R1 605
5 TraesCS3A01G436000 chr7D 595976728 595977341 613 True 529.000000 529 82.553000 1759 2364 1 chr7D.!!$R1 605
6 TraesCS3A01G436000 chr1B 673849202 673851172 1970 False 328.666667 512 82.485667 2630 4629 3 chr1B.!!$F1 1999
7 TraesCS3A01G436000 chr5D 529528805 529529420 615 True 503.000000 503 81.862000 1759 2364 1 chr5D.!!$R1 605
8 TraesCS3A01G436000 chr1D 483672721 483675922 3201 False 345.000000 499 81.798500 2057 4629 4 chr1D.!!$F1 2572
9 TraesCS3A01G436000 chr1A 580494194 580496405 2211 False 302.000000 460 81.648667 2635 4629 3 chr1A.!!$F1 1994

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
308 309 0.036010 CCCGTCCTCACAAGAAGCAT 60.036 55.0 0.00 0.0 0.00 3.79 F
1191 1252 0.036105 ATGACCGTGCATTCTGCTCA 60.036 50.0 0.00 0.0 45.31 4.26 F
1393 1454 0.177604 AGGACTACGACGACGAGGAT 59.822 55.0 15.32 0.0 42.66 3.24 F
1409 1470 0.751452 GGATGACGGTAGGTTCTCCC 59.249 60.0 0.00 0.0 0.00 4.30 F
3276 3959 0.695924 CCATGGACACCACCCAGTAA 59.304 55.0 5.56 0.0 35.80 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1378 1439 0.043224 CGTCATCCTCGTCGTCGTAG 60.043 60.000 1.33 0.0 38.33 3.51 R
2758 3418 0.599204 CGTAAACGCACCTCACCACT 60.599 55.000 0.00 0.0 0.00 4.00 R
2780 3440 1.680338 GAGGCAACCACTCAAGTTGT 58.320 50.000 2.11 0.0 45.14 3.32 R
3353 4115 1.815003 GGCTGTCAAGACAAATCCCAG 59.185 52.381 4.29 0.0 41.33 4.45 R
4823 6076 0.178921 TGTGCCTCTCTGGAAGGAGT 60.179 55.000 0.00 0.0 38.35 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.074526 TGCTGAGAGCCGTGCCTC 62.075 66.667 0.00 0.00 41.51 4.70
18 19 3.768922 GCTGAGAGCCGTGCCTCT 61.769 66.667 12.10 6.58 44.57 3.69
19 20 2.977178 CTGAGAGCCGTGCCTCTT 59.023 61.111 12.10 0.00 42.06 2.85
20 21 1.447489 CTGAGAGCCGTGCCTCTTG 60.447 63.158 12.10 2.57 42.06 3.02
21 22 1.881903 CTGAGAGCCGTGCCTCTTGA 61.882 60.000 12.10 0.00 42.06 3.02
22 23 1.293498 GAGAGCCGTGCCTCTTGAA 59.707 57.895 0.00 0.00 42.06 2.69
23 24 0.320771 GAGAGCCGTGCCTCTTGAAA 60.321 55.000 0.00 0.00 42.06 2.69
24 25 0.108585 AGAGCCGTGCCTCTTGAAAA 59.891 50.000 0.00 0.00 39.06 2.29
25 26 0.238553 GAGCCGTGCCTCTTGAAAAC 59.761 55.000 0.00 0.00 0.00 2.43
26 27 1.082104 GCCGTGCCTCTTGAAAACG 60.082 57.895 0.00 0.00 0.00 3.60
27 28 1.503818 GCCGTGCCTCTTGAAAACGA 61.504 55.000 0.00 0.00 36.38 3.85
28 29 0.941542 CCGTGCCTCTTGAAAACGAA 59.058 50.000 0.00 0.00 36.38 3.85
29 30 1.332375 CCGTGCCTCTTGAAAACGAAA 59.668 47.619 0.00 0.00 36.38 3.46
30 31 2.223386 CCGTGCCTCTTGAAAACGAAAA 60.223 45.455 0.00 0.00 36.38 2.29
31 32 3.430931 CGTGCCTCTTGAAAACGAAAAA 58.569 40.909 0.00 0.00 36.38 1.94
32 33 4.041723 CGTGCCTCTTGAAAACGAAAAAT 58.958 39.130 0.00 0.00 36.38 1.82
33 34 4.085619 CGTGCCTCTTGAAAACGAAAAATG 60.086 41.667 0.00 0.00 36.38 2.32
34 35 4.803613 GTGCCTCTTGAAAACGAAAAATGT 59.196 37.500 0.00 0.00 0.00 2.71
35 36 4.803088 TGCCTCTTGAAAACGAAAAATGTG 59.197 37.500 0.00 0.00 0.00 3.21
36 37 4.803613 GCCTCTTGAAAACGAAAAATGTGT 59.196 37.500 0.00 0.00 0.00 3.72
37 38 5.290885 GCCTCTTGAAAACGAAAAATGTGTT 59.709 36.000 0.00 0.00 0.00 3.32
38 39 6.183360 GCCTCTTGAAAACGAAAAATGTGTTT 60.183 34.615 0.00 0.00 37.41 2.83
39 40 7.623297 GCCTCTTGAAAACGAAAAATGTGTTTT 60.623 33.333 2.30 2.30 45.54 2.43
66 67 9.615295 TTTATTTCATAAGAGTTACGGTTTTGC 57.385 29.630 0.00 0.00 0.00 3.68
67 68 6.870971 TTTCATAAGAGTTACGGTTTTGCT 57.129 33.333 0.00 0.00 0.00 3.91
68 69 6.870971 TTCATAAGAGTTACGGTTTTGCTT 57.129 33.333 0.00 0.00 0.00 3.91
69 70 6.870971 TCATAAGAGTTACGGTTTTGCTTT 57.129 33.333 0.00 0.00 0.00 3.51
70 71 6.894828 TCATAAGAGTTACGGTTTTGCTTTC 58.105 36.000 0.00 0.00 0.00 2.62
71 72 6.483974 TCATAAGAGTTACGGTTTTGCTTTCA 59.516 34.615 0.00 0.00 0.00 2.69
72 73 5.767816 AAGAGTTACGGTTTTGCTTTCAT 57.232 34.783 0.00 0.00 0.00 2.57
73 74 5.108385 AGAGTTACGGTTTTGCTTTCATG 57.892 39.130 0.00 0.00 0.00 3.07
74 75 4.819630 AGAGTTACGGTTTTGCTTTCATGA 59.180 37.500 0.00 0.00 0.00 3.07
75 76 5.049405 AGAGTTACGGTTTTGCTTTCATGAG 60.049 40.000 0.00 0.00 0.00 2.90
76 77 4.819630 AGTTACGGTTTTGCTTTCATGAGA 59.180 37.500 0.00 0.00 0.00 3.27
77 78 3.904136 ACGGTTTTGCTTTCATGAGAG 57.096 42.857 8.88 8.88 0.00 3.20
78 79 2.030805 ACGGTTTTGCTTTCATGAGAGC 60.031 45.455 26.94 26.94 39.33 4.09
79 80 2.669391 CGGTTTTGCTTTCATGAGAGCC 60.669 50.000 29.45 16.86 38.11 4.70
80 81 2.297033 GGTTTTGCTTTCATGAGAGCCA 59.703 45.455 29.45 19.56 38.11 4.75
81 82 3.311966 GTTTTGCTTTCATGAGAGCCAC 58.688 45.455 29.45 20.74 38.11 5.01
82 83 1.159285 TTGCTTTCATGAGAGCCACG 58.841 50.000 29.45 0.81 38.11 4.94
83 84 0.674581 TGCTTTCATGAGAGCCACGG 60.675 55.000 29.45 0.12 38.11 4.94
84 85 0.674895 GCTTTCATGAGAGCCACGGT 60.675 55.000 24.16 0.00 32.80 4.83
85 86 1.363744 CTTTCATGAGAGCCACGGTC 58.636 55.000 0.00 0.00 0.00 4.79
86 87 0.684535 TTTCATGAGAGCCACGGTCA 59.315 50.000 0.00 0.00 31.89 4.02
87 88 0.904649 TTCATGAGAGCCACGGTCAT 59.095 50.000 0.00 0.00 31.89 3.06
88 89 0.176449 TCATGAGAGCCACGGTCATG 59.824 55.000 8.25 8.25 46.01 3.07
89 90 1.153289 ATGAGAGCCACGGTCATGC 60.153 57.895 0.00 0.00 31.89 4.06
90 91 1.620739 ATGAGAGCCACGGTCATGCT 61.621 55.000 0.00 0.00 38.24 3.79
91 92 1.078848 GAGAGCCACGGTCATGCTT 60.079 57.895 0.00 0.00 34.99 3.91
92 93 0.674895 GAGAGCCACGGTCATGCTTT 60.675 55.000 0.00 0.00 34.99 3.51
93 94 0.674895 AGAGCCACGGTCATGCTTTC 60.675 55.000 0.00 0.00 34.99 2.62
94 95 0.955428 GAGCCACGGTCATGCTTTCA 60.955 55.000 0.00 0.00 34.99 2.69
95 96 1.210155 GCCACGGTCATGCTTTCAC 59.790 57.895 0.00 0.00 0.00 3.18
96 97 1.497278 CCACGGTCATGCTTTCACG 59.503 57.895 0.00 0.00 0.00 4.35
97 98 0.948623 CCACGGTCATGCTTTCACGA 60.949 55.000 0.00 0.00 0.00 4.35
98 99 0.439985 CACGGTCATGCTTTCACGAG 59.560 55.000 0.00 0.00 0.00 4.18
99 100 0.317160 ACGGTCATGCTTTCACGAGA 59.683 50.000 0.00 0.00 0.00 4.04
100 101 0.994995 CGGTCATGCTTTCACGAGAG 59.005 55.000 0.00 0.00 0.00 3.20
101 102 1.363744 GGTCATGCTTTCACGAGAGG 58.636 55.000 0.00 0.00 0.00 3.69
102 103 1.338200 GGTCATGCTTTCACGAGAGGT 60.338 52.381 0.00 0.00 0.00 3.85
103 104 1.996191 GTCATGCTTTCACGAGAGGTC 59.004 52.381 0.00 0.00 0.00 3.85
116 117 4.521559 AGGTCGTGCCTCTCAGAA 57.478 55.556 0.00 0.00 46.96 3.02
117 118 2.746697 AGGTCGTGCCTCTCAGAAA 58.253 52.632 0.00 0.00 46.96 2.52
118 119 1.048601 AGGTCGTGCCTCTCAGAAAA 58.951 50.000 0.00 0.00 46.96 2.29
119 120 1.416401 AGGTCGTGCCTCTCAGAAAAA 59.584 47.619 0.00 0.00 46.96 1.94
171 172 5.921962 AAAAATGAGACTAATCCAAGGGC 57.078 39.130 0.00 0.00 0.00 5.19
172 173 4.870021 AAATGAGACTAATCCAAGGGCT 57.130 40.909 0.00 0.00 0.00 5.19
173 174 5.975988 AAATGAGACTAATCCAAGGGCTA 57.024 39.130 0.00 0.00 0.00 3.93
174 175 5.975988 AATGAGACTAATCCAAGGGCTAA 57.024 39.130 0.00 0.00 0.00 3.09
175 176 4.755266 TGAGACTAATCCAAGGGCTAAC 57.245 45.455 0.00 0.00 0.00 2.34
176 177 3.454812 TGAGACTAATCCAAGGGCTAACC 59.545 47.826 0.00 0.00 40.67 2.85
191 192 2.711542 CTAACCCTCGTTGGCATTTCT 58.288 47.619 0.00 0.00 33.17 2.52
192 193 1.995376 AACCCTCGTTGGCATTTCTT 58.005 45.000 0.00 0.00 0.00 2.52
193 194 1.995376 ACCCTCGTTGGCATTTCTTT 58.005 45.000 0.00 0.00 0.00 2.52
194 195 3.149005 ACCCTCGTTGGCATTTCTTTA 57.851 42.857 0.00 0.00 0.00 1.85
195 196 3.697166 ACCCTCGTTGGCATTTCTTTAT 58.303 40.909 0.00 0.00 0.00 1.40
196 197 4.850680 ACCCTCGTTGGCATTTCTTTATA 58.149 39.130 0.00 0.00 0.00 0.98
197 198 4.881850 ACCCTCGTTGGCATTTCTTTATAG 59.118 41.667 0.00 0.00 0.00 1.31
198 199 4.275936 CCCTCGTTGGCATTTCTTTATAGG 59.724 45.833 0.00 0.00 0.00 2.57
199 200 5.123227 CCTCGTTGGCATTTCTTTATAGGA 58.877 41.667 0.00 0.00 0.00 2.94
200 201 5.237344 CCTCGTTGGCATTTCTTTATAGGAG 59.763 44.000 0.00 0.00 0.00 3.69
201 202 5.984725 TCGTTGGCATTTCTTTATAGGAGA 58.015 37.500 0.00 0.00 0.00 3.71
202 203 6.411376 TCGTTGGCATTTCTTTATAGGAGAA 58.589 36.000 0.00 0.00 0.00 2.87
203 204 6.882140 TCGTTGGCATTTCTTTATAGGAGAAA 59.118 34.615 12.83 12.83 44.53 2.52
204 205 6.967199 CGTTGGCATTTCTTTATAGGAGAAAC 59.033 38.462 12.76 4.98 43.58 2.78
205 206 7.148239 CGTTGGCATTTCTTTATAGGAGAAACT 60.148 37.037 12.76 4.10 43.58 2.66
206 207 7.865706 TGGCATTTCTTTATAGGAGAAACTC 57.134 36.000 12.76 8.98 43.58 3.01
207 208 7.633789 TGGCATTTCTTTATAGGAGAAACTCT 58.366 34.615 12.76 0.18 43.58 3.24
208 209 8.768397 TGGCATTTCTTTATAGGAGAAACTCTA 58.232 33.333 12.76 6.07 43.58 2.43
209 210 9.785982 GGCATTTCTTTATAGGAGAAACTCTAT 57.214 33.333 12.76 0.00 43.58 1.98
214 215 8.768501 TCTTTATAGGAGAAACTCTATGAGCA 57.231 34.615 0.00 0.00 32.04 4.26
215 216 8.634444 TCTTTATAGGAGAAACTCTATGAGCAC 58.366 37.037 0.00 0.00 32.04 4.40
216 217 5.799827 ATAGGAGAAACTCTATGAGCACC 57.200 43.478 0.00 0.00 32.04 5.01
217 218 2.428890 AGGAGAAACTCTATGAGCACCG 59.571 50.000 0.00 0.00 32.04 4.94
218 219 2.197577 GAGAAACTCTATGAGCACCGC 58.802 52.381 0.00 0.00 32.04 5.68
219 220 0.924090 GAAACTCTATGAGCACCGCG 59.076 55.000 0.00 0.00 32.04 6.46
220 221 1.084370 AAACTCTATGAGCACCGCGC 61.084 55.000 0.00 0.00 42.91 6.86
237 238 4.813526 CGTCCGTGCCGAGACTCG 62.814 72.222 18.08 18.08 40.07 4.18
238 239 3.429141 GTCCGTGCCGAGACTCGA 61.429 66.667 26.11 4.13 43.74 4.04
239 240 2.670592 TCCGTGCCGAGACTCGAA 60.671 61.111 26.11 11.05 43.74 3.71
240 241 2.504244 CCGTGCCGAGACTCGAAC 60.504 66.667 26.11 20.37 43.74 3.95
241 242 2.561885 CGTGCCGAGACTCGAACT 59.438 61.111 26.11 0.00 43.74 3.01
242 243 1.512310 CGTGCCGAGACTCGAACTC 60.512 63.158 26.11 15.90 43.74 3.01
251 252 3.682792 CTCGAACTCGGGTGGACT 58.317 61.111 0.00 0.00 40.29 3.85
252 253 1.213013 CTCGAACTCGGGTGGACTG 59.787 63.158 0.00 0.00 40.29 3.51
253 254 2.214181 CTCGAACTCGGGTGGACTGG 62.214 65.000 0.00 0.00 40.29 4.00
254 255 2.047179 GAACTCGGGTGGACTGGC 60.047 66.667 0.00 0.00 0.00 4.85
255 256 2.847234 AACTCGGGTGGACTGGCA 60.847 61.111 0.00 0.00 0.00 4.92
256 257 2.788191 GAACTCGGGTGGACTGGCAG 62.788 65.000 14.16 14.16 0.00 4.85
257 258 4.767255 CTCGGGTGGACTGGCAGC 62.767 72.222 15.89 7.42 0.00 5.25
259 260 4.641645 CGGGTGGACTGGCAGCAA 62.642 66.667 15.89 0.00 0.00 3.91
260 261 2.985847 GGGTGGACTGGCAGCAAC 60.986 66.667 15.89 10.93 0.00 4.17
261 262 2.985847 GGTGGACTGGCAGCAACC 60.986 66.667 15.89 16.16 0.00 3.77
262 263 2.113986 GTGGACTGGCAGCAACCT 59.886 61.111 15.89 0.00 0.00 3.50
263 264 1.968540 GTGGACTGGCAGCAACCTC 60.969 63.158 15.89 12.49 0.00 3.85
264 265 2.431683 GGACTGGCAGCAACCTCA 59.568 61.111 15.89 0.00 0.00 3.86
265 266 1.673665 GGACTGGCAGCAACCTCAG 60.674 63.158 15.89 0.00 0.00 3.35
266 267 2.282040 ACTGGCAGCAACCTCAGC 60.282 61.111 15.89 0.00 0.00 4.26
267 268 2.033757 CTGGCAGCAACCTCAGCT 59.966 61.111 0.00 0.00 44.62 4.24
272 273 3.811702 AGCAACCTCAGCTGCCTA 58.188 55.556 9.47 0.00 41.61 3.93
273 274 1.601171 AGCAACCTCAGCTGCCTAG 59.399 57.895 9.47 0.70 41.61 3.02
282 283 4.410400 GCTGCCTAGCCAACGGGT 62.410 66.667 0.00 0.00 44.33 5.28
283 284 2.125106 CTGCCTAGCCAACGGGTC 60.125 66.667 0.00 0.00 34.28 4.46
284 285 4.077184 TGCCTAGCCAACGGGTCG 62.077 66.667 0.00 0.00 34.28 4.79
285 286 3.766691 GCCTAGCCAACGGGTCGA 61.767 66.667 0.00 0.00 34.28 4.20
286 287 2.183555 CCTAGCCAACGGGTCGAC 59.816 66.667 7.13 7.13 34.28 4.20
287 288 2.202570 CTAGCCAACGGGTCGACG 60.203 66.667 9.92 1.01 40.31 5.12
288 289 4.424566 TAGCCAACGGGTCGACGC 62.425 66.667 21.72 21.72 37.37 5.19
302 303 4.003788 ACGCCCCGTCCTCACAAG 62.004 66.667 0.00 0.00 33.69 3.16
303 304 3.691342 CGCCCCGTCCTCACAAGA 61.691 66.667 0.00 0.00 0.00 3.02
304 305 2.747686 GCCCCGTCCTCACAAGAA 59.252 61.111 0.00 0.00 0.00 2.52
305 306 1.376037 GCCCCGTCCTCACAAGAAG 60.376 63.158 0.00 0.00 0.00 2.85
306 307 1.376037 CCCCGTCCTCACAAGAAGC 60.376 63.158 0.00 0.00 0.00 3.86
307 308 1.371183 CCCGTCCTCACAAGAAGCA 59.629 57.895 0.00 0.00 0.00 3.91
308 309 0.036010 CCCGTCCTCACAAGAAGCAT 60.036 55.000 0.00 0.00 0.00 3.79
309 310 1.081892 CCGTCCTCACAAGAAGCATG 58.918 55.000 0.00 0.00 0.00 4.06
310 311 1.338105 CCGTCCTCACAAGAAGCATGA 60.338 52.381 0.00 0.00 0.00 3.07
311 312 2.625737 CGTCCTCACAAGAAGCATGAT 58.374 47.619 0.00 0.00 0.00 2.45
312 313 3.005554 CGTCCTCACAAGAAGCATGATT 58.994 45.455 0.00 0.00 0.00 2.57
313 314 3.438087 CGTCCTCACAAGAAGCATGATTT 59.562 43.478 0.00 0.00 0.00 2.17
314 315 4.083110 CGTCCTCACAAGAAGCATGATTTT 60.083 41.667 0.00 0.00 0.00 1.82
315 316 5.159209 GTCCTCACAAGAAGCATGATTTTG 58.841 41.667 0.00 7.28 0.00 2.44
316 317 3.924686 CCTCACAAGAAGCATGATTTTGC 59.075 43.478 14.38 0.00 43.09 3.68
325 326 2.945278 GCATGATTTTGCTTTCACGGA 58.055 42.857 0.00 0.00 39.57 4.69
331 332 4.819783 TGCTTTCACGGAAGGCAT 57.180 50.000 15.80 0.00 46.67 4.40
353 354 0.179234 TTGTGTGCCTCTCGGAAACA 59.821 50.000 0.00 0.00 0.00 2.83
396 398 1.899437 TTTCCTTCCGCGAGAGGCAT 61.899 55.000 19.15 0.00 43.84 4.40
397 399 1.040893 TTCCTTCCGCGAGAGGCATA 61.041 55.000 19.15 7.55 43.84 3.14
404 406 1.597937 CCGCGAGAGGCATAATTTTGC 60.598 52.381 8.23 11.94 43.84 3.68
434 436 4.588084 CACGGTTGTGCTTTCACG 57.412 55.556 0.00 0.00 46.01 4.35
440 442 1.583054 GTTGTGCTTTCACGAGAGGT 58.417 50.000 0.00 0.00 46.01 3.85
444 446 1.068748 GTGCTTTCACGAGAGGTACGA 60.069 52.381 0.00 0.00 32.98 3.43
447 449 1.538512 CTTTCACGAGAGGTACGACCA 59.461 52.381 6.78 0.00 41.95 4.02
452 454 1.384989 CGAGAGGTACGACCATGCCT 61.385 60.000 6.78 0.00 41.95 4.75
456 458 1.207329 GAGGTACGACCATGCCTCTTT 59.793 52.381 7.37 0.00 45.37 2.52
457 459 1.207329 AGGTACGACCATGCCTCTTTC 59.793 52.381 6.78 0.00 41.95 2.62
458 460 1.278238 GTACGACCATGCCTCTTTCG 58.722 55.000 0.00 0.00 35.80 3.46
461 463 1.270625 ACGACCATGCCTCTTTCGAAA 60.271 47.619 10.71 10.71 33.87 3.46
464 466 3.074412 GACCATGCCTCTTTCGAAAAGA 58.926 45.455 12.41 10.31 0.00 2.52
465 467 3.077359 ACCATGCCTCTTTCGAAAAGAG 58.923 45.455 20.99 20.99 42.53 2.85
466 468 3.244561 ACCATGCCTCTTTCGAAAAGAGA 60.245 43.478 25.77 15.11 44.96 3.10
496 498 2.306847 TGCTCCCTGTTCAGTTTTTCC 58.693 47.619 0.00 0.00 0.00 3.13
501 503 3.388676 TCCCTGTTCAGTTTTTCCGTCTA 59.611 43.478 0.00 0.00 0.00 2.59
534 550 9.316730 TCATGAAAAGAAAATCTTCAAAACCTG 57.683 29.630 0.00 0.00 35.27 4.00
543 559 6.469782 AATCTTCAAAACCTGTCAACATGT 57.530 33.333 0.00 0.00 0.00 3.21
555 571 7.450074 ACCTGTCAACATGTGATCTAGTTTTA 58.550 34.615 0.00 0.00 38.90 1.52
571 587 4.232221 AGTTTTAAAGATCTCGACGCGAA 58.768 39.130 15.93 0.00 34.74 4.70
572 588 4.682860 AGTTTTAAAGATCTCGACGCGAAA 59.317 37.500 15.93 0.00 34.74 3.46
581 597 3.513662 TCTCGACGCGAAAAATCCAATA 58.486 40.909 15.93 0.00 34.74 1.90
589 605 7.044589 ACGCGAAAAATCCAATAATGAAAAC 57.955 32.000 15.93 0.00 0.00 2.43
591 607 6.465978 GCGAAAAATCCAATAATGAAAACGG 58.534 36.000 0.00 0.00 0.00 4.44
604 620 3.712187 TGAAAACGGTTCAAGATTTGGC 58.288 40.909 0.00 0.00 0.00 4.52
609 625 1.335872 CGGTTCAAGATTTGGCCACAC 60.336 52.381 3.88 0.00 0.00 3.82
626 642 6.601613 TGGCCACACGATTTAAGAGATAAAAT 59.398 34.615 0.00 0.00 37.06 1.82
679 698 0.439985 CTTCCATGTCGCGACAAGTG 59.560 55.000 41.74 34.06 45.41 3.16
681 700 0.246360 TCCATGTCGCGACAAGTGAT 59.754 50.000 41.74 24.89 45.41 3.06
699 718 2.127118 GCGCATGCAGTGTGTCAC 60.127 61.111 19.57 0.00 42.15 3.67
700 719 2.171701 CGCATGCAGTGTGTCACG 59.828 61.111 19.57 0.00 39.64 4.35
704 723 0.041926 CATGCAGTGTGTCACGTGTG 60.042 55.000 16.51 6.32 39.64 3.82
714 733 1.092921 GTCACGTGTGGCAACCTGAA 61.093 55.000 16.51 0.00 34.82 3.02
715 734 0.393132 TCACGTGTGGCAACCTGAAA 60.393 50.000 16.51 0.00 0.00 2.69
716 735 0.453793 CACGTGTGGCAACCTGAAAA 59.546 50.000 7.58 0.00 0.00 2.29
717 736 0.738389 ACGTGTGGCAACCTGAAAAG 59.262 50.000 0.00 0.00 0.00 2.27
721 740 1.962807 TGTGGCAACCTGAAAAGATGG 59.037 47.619 0.00 0.00 0.00 3.51
725 744 1.203287 GCAACCTGAAAAGATGGGAGC 59.797 52.381 0.00 0.00 0.00 4.70
746 765 4.859798 AGCGATCTTTGAAAGAAGTACTCG 59.140 41.667 18.33 18.33 41.63 4.18
768 787 8.767085 ACTCGTTAATTAGTGATTTCGACAAAA 58.233 29.630 0.00 0.00 33.14 2.44
769 788 9.250986 CTCGTTAATTAGTGATTTCGACAAAAG 57.749 33.333 0.00 0.00 33.14 2.27
770 789 8.980610 TCGTTAATTAGTGATTTCGACAAAAGA 58.019 29.630 0.00 0.00 32.35 2.52
826 875 2.452813 GGTCACACGGCATAGCACG 61.453 63.158 0.00 0.00 0.00 5.34
883 933 2.516460 GCCTCCGAGCCGACTAGA 60.516 66.667 0.00 0.00 0.00 2.43
1017 1069 2.890311 GGAGATGATCTCGTCCATGTCT 59.110 50.000 15.64 0.00 44.28 3.41
1121 1173 4.803426 CGCCCTCGCCACAGAGTC 62.803 72.222 0.00 0.00 36.56 3.36
1185 1246 1.009829 GACCTCATGACCGTGCATTC 58.990 55.000 0.00 0.00 0.00 2.67
1190 1251 0.376152 CATGACCGTGCATTCTGCTC 59.624 55.000 0.00 0.00 45.31 4.26
1191 1252 0.036105 ATGACCGTGCATTCTGCTCA 60.036 50.000 0.00 0.00 45.31 4.26
1195 1256 1.642037 CCGTGCATTCTGCTCACAGG 61.642 60.000 0.00 0.00 45.31 4.00
1196 1257 1.642037 CGTGCATTCTGCTCACAGGG 61.642 60.000 0.00 0.00 45.31 4.45
1198 1259 0.321919 TGCATTCTGCTCACAGGGAC 60.322 55.000 0.34 0.00 45.31 4.46
1201 1262 0.247736 ATTCTGCTCACAGGGACGAC 59.752 55.000 0.00 0.00 44.59 4.34
1258 1319 4.194720 GAGGTCGACGGCGCTGAT 62.195 66.667 25.98 7.18 37.46 2.90
1267 1328 2.420890 GGCGCTGATGAGGAGGAG 59.579 66.667 7.64 0.00 0.00 3.69
1357 1418 2.971598 CGGTGTCTCCCATGGGCTT 61.972 63.158 27.41 0.00 34.68 4.35
1393 1454 0.177604 AGGACTACGACGACGAGGAT 59.822 55.000 15.32 0.00 42.66 3.24
1404 1465 1.101331 GACGAGGATGACGGTAGGTT 58.899 55.000 0.00 0.00 34.93 3.50
1409 1470 0.751452 GGATGACGGTAGGTTCTCCC 59.249 60.000 0.00 0.00 0.00 4.30
1413 1474 4.904466 CGGTAGGTTCTCCCGTTG 57.096 61.111 0.00 0.00 38.74 4.10
1414 1475 1.447314 CGGTAGGTTCTCCCGTTGC 60.447 63.158 0.00 0.00 38.74 4.17
1415 1476 1.078637 GGTAGGTTCTCCCGTTGCC 60.079 63.158 0.00 0.00 38.74 4.52
1416 1477 1.447314 GTAGGTTCTCCCGTTGCCG 60.447 63.158 0.00 0.00 38.74 5.69
1450 1511 1.679680 CTTGGCTGCCAATTCGATCAT 59.320 47.619 32.32 0.00 43.07 2.45
1466 1527 3.742882 CGATCATGTCTTGTCTTGTGTGT 59.257 43.478 0.00 0.00 0.00 3.72
1467 1528 4.376717 CGATCATGTCTTGTCTTGTGTGTG 60.377 45.833 0.00 0.00 0.00 3.82
1468 1529 3.205338 TCATGTCTTGTCTTGTGTGTGG 58.795 45.455 0.00 0.00 0.00 4.17
1469 1530 1.378531 TGTCTTGTCTTGTGTGTGGC 58.621 50.000 0.00 0.00 0.00 5.01
1595 1656 2.770802 ACCCTCATCTCATCAGGAACAG 59.229 50.000 0.00 0.00 0.00 3.16
1621 1682 5.164620 TGTGAGTATGATTTCTCTTGCCA 57.835 39.130 0.00 0.00 0.00 4.92
1623 1684 6.182627 TGTGAGTATGATTTCTCTTGCCATT 58.817 36.000 0.00 0.00 0.00 3.16
1624 1685 6.317140 TGTGAGTATGATTTCTCTTGCCATTC 59.683 38.462 0.00 0.00 0.00 2.67
1625 1686 5.824624 TGAGTATGATTTCTCTTGCCATTCC 59.175 40.000 0.00 0.00 0.00 3.01
1632 1693 1.139654 TCTCTTGCCATTCCGGAGATG 59.860 52.381 3.34 11.53 36.56 2.90
1635 1696 2.705658 TCTTGCCATTCCGGAGATGTAT 59.294 45.455 18.95 3.34 36.56 2.29
1638 1699 1.537202 GCCATTCCGGAGATGTATTGC 59.463 52.381 18.95 13.62 36.56 3.56
1640 1701 3.070018 CCATTCCGGAGATGTATTGCTC 58.930 50.000 18.95 0.00 36.56 4.26
1661 1726 2.682155 TTTTTGTTCTTGGTGGTGGC 57.318 45.000 0.00 0.00 0.00 5.01
1677 1743 2.428171 GGTGGCATCAGCATTACATTGT 59.572 45.455 0.00 0.00 44.61 2.71
1691 1757 3.719268 ACATTGTAGGTGAATGAGCCA 57.281 42.857 0.00 0.00 35.23 4.75
1727 1795 9.511272 CTTTATTAGGATGATGATGGTGATGAA 57.489 33.333 0.00 0.00 0.00 2.57
1805 1873 1.873591 GCACACAACGAGGATGAGTTT 59.126 47.619 0.00 0.00 0.00 2.66
1808 1876 4.610680 GCACACAACGAGGATGAGTTTAAC 60.611 45.833 0.00 0.00 0.00 2.01
1833 1901 4.973168 TCTTCAGGCAAGTGTCAAGTTAT 58.027 39.130 0.00 0.00 33.27 1.89
1866 1934 9.539825 TTTTTCTCTGCATTTGCTAAAAATGTA 57.460 25.926 11.30 6.95 42.66 2.29
1882 1951 7.679659 AAAAATGTAGCTGTCGTTCTTTTTC 57.320 32.000 0.00 0.00 0.00 2.29
1894 1963 5.696724 GTCGTTCTTTTTCTCTGATTCTGGA 59.303 40.000 0.00 0.00 0.00 3.86
1896 1965 6.425114 TCGTTCTTTTTCTCTGATTCTGGAAG 59.575 38.462 0.00 0.00 0.00 3.46
1903 1972 7.782897 TTTCTCTGATTCTGGAAGTCTTCTA 57.217 36.000 12.31 5.51 33.76 2.10
1904 1973 7.403312 TTCTCTGATTCTGGAAGTCTTCTAG 57.597 40.000 17.58 17.58 39.38 2.43
1921 1990 5.701290 TCTTCTAGTAACAAGAAGGCAAAGC 59.299 40.000 11.73 0.00 46.55 3.51
1928 1997 1.066908 CAAGAAGGCAAAGCGGAAACA 59.933 47.619 0.00 0.00 0.00 2.83
1949 2018 9.807649 GAAACATTTATGTGGAGCATTATTCTT 57.192 29.630 0.00 0.00 41.61 2.52
1963 2032 8.218338 AGCATTATTCTTGTTGGACTGAATAG 57.782 34.615 0.00 0.00 34.31 1.73
1994 2063 9.495754 GTATTCTCAAATTTAGTTGATGTCAGC 57.504 33.333 0.00 0.00 36.92 4.26
2000 2069 7.877612 TCAAATTTAGTTGATGTCAGCAGAGTA 59.122 33.333 0.00 0.00 32.56 2.59
2001 2070 8.671921 CAAATTTAGTTGATGTCAGCAGAGTAT 58.328 33.333 0.00 0.00 0.00 2.12
2003 2072 7.601073 TTTAGTTGATGTCAGCAGAGTATTG 57.399 36.000 0.00 0.00 0.00 1.90
2008 2077 6.968131 TGATGTCAGCAGAGTATTGTTTAC 57.032 37.500 0.00 0.00 0.00 2.01
2012 2081 5.696270 TGTCAGCAGAGTATTGTTTACTGTG 59.304 40.000 5.75 5.75 40.49 3.66
2334 2432 5.102313 AGTGCTGCTTTGTTTCTGTTAAAC 58.898 37.500 0.00 0.00 0.00 2.01
2364 2468 8.457238 AAATGAAGGCTTATTCTATTCCTCAC 57.543 34.615 0.00 0.00 0.00 3.51
2443 2554 8.954950 ACTTGGATATTGTAATGTTCTCAGAG 57.045 34.615 0.00 0.00 0.00 3.35
2452 2563 6.552629 TGTAATGTTCTCAGAGACATACGAC 58.447 40.000 0.00 7.37 0.00 4.34
2528 2641 6.656632 TGTTGTTGGGCTTTGATGTTATTA 57.343 33.333 0.00 0.00 0.00 0.98
2602 2715 3.330998 ACAGAGAAAAGGTTAAGGGGGAG 59.669 47.826 0.00 0.00 0.00 4.30
2649 3309 3.263941 GCGGGTGAGCGTTCATTT 58.736 55.556 4.92 0.00 35.39 2.32
2650 3310 1.579429 GCGGGTGAGCGTTCATTTT 59.421 52.632 4.92 0.00 35.39 1.82
2706 3366 3.618019 GCATGTCATGTGCAGGGAAAAAT 60.618 43.478 14.26 0.00 42.08 1.82
2727 3387 2.032965 TACAAGGAGGGTAGCCACAA 57.967 50.000 14.62 0.00 0.00 3.33
2776 3436 0.865769 CAGTGGTGAGGTGCGTTTAC 59.134 55.000 0.00 0.00 0.00 2.01
2780 3440 1.068281 TGGTGAGGTGCGTTTACGTTA 59.932 47.619 0.00 0.00 42.22 3.18
2797 3457 2.286772 CGTTACAACTTGAGTGGTTGCC 60.287 50.000 0.00 0.00 45.34 4.52
2800 3460 0.954452 CAACTTGAGTGGTTGCCTCC 59.046 55.000 0.00 0.00 37.76 4.30
2805 3465 1.352622 TGAGTGGTTGCCTCCCTTGT 61.353 55.000 0.00 0.00 0.00 3.16
2953 3613 2.164827 TGCAACATCATGATGACAAGGC 59.835 45.455 36.37 28.02 41.20 4.35
3155 3822 9.603921 AGCCATTATGTGAATTTTTATTCCTTG 57.396 29.630 0.00 0.00 0.00 3.61
3204 3887 3.117776 TGGCCAGATTCTAAGCATCATGT 60.118 43.478 0.00 0.00 0.00 3.21
3259 3942 3.814625 TCTGTGTTGTGTAATTGAGCCA 58.185 40.909 0.00 0.00 0.00 4.75
3275 3958 1.847798 GCCATGGACACCACCCAGTA 61.848 60.000 18.40 0.00 35.80 2.74
3276 3959 0.695924 CCATGGACACCACCCAGTAA 59.304 55.000 5.56 0.00 35.80 2.24
3296 3979 9.052759 CCAGTAATGTATGAGTAACCAATAACC 57.947 37.037 0.00 0.00 0.00 2.85
3353 4115 8.575649 TCTTATTACCTTCTGATTTTGGTTCC 57.424 34.615 0.00 0.00 34.33 3.62
3461 4227 5.678132 AAATTGGCATTCTTGTTTTCTGC 57.322 34.783 0.00 0.00 0.00 4.26
3484 4250 6.206438 TGCTGTGTTACTGCAGATATTTTGAA 59.794 34.615 23.35 0.00 45.89 2.69
3535 4301 9.477484 TTCTTGTTGAAGAGTCTGTTACTTATC 57.523 33.333 0.00 0.00 39.44 1.75
3537 4303 9.261180 CTTGTTGAAGAGTCTGTTACTTATCAA 57.739 33.333 0.00 0.00 39.07 2.57
3621 4732 1.478105 TGACATGAGAGGTGATGGACG 59.522 52.381 0.00 0.00 0.00 4.79
3643 4754 4.865925 CGAAGTTGTCATAAATGGTCCGTA 59.134 41.667 0.00 0.00 0.00 4.02
3655 4766 1.476891 TGGTCCGTAGAAGCAGATGTC 59.523 52.381 0.00 0.00 0.00 3.06
3833 4989 6.805271 CAGATTAACAGAGTCCATGCTTTTTG 59.195 38.462 0.00 0.00 0.00 2.44
3838 4994 6.017400 ACAGAGTCCATGCTTTTTGTTATG 57.983 37.500 0.00 0.00 0.00 1.90
3839 4995 5.769662 ACAGAGTCCATGCTTTTTGTTATGA 59.230 36.000 0.00 0.00 0.00 2.15
3865 5021 4.082571 AGCAACATGTTTTGAGTAGGATGC 60.083 41.667 8.77 5.47 0.00 3.91
3895 5051 5.866335 ATGGACTATAGACTCGACGATTC 57.134 43.478 6.78 7.09 0.00 2.52
3938 5094 7.770433 CCATTTCCATCTCTTAACTGTATGTCA 59.230 37.037 0.00 0.00 0.00 3.58
3955 5113 3.024547 TGTCACAAAATTTCCGGTTCCA 58.975 40.909 0.00 0.00 0.00 3.53
4011 5205 7.748691 TGAATTTGTGATTCTGATTCACTCA 57.251 32.000 24.70 18.97 43.12 3.41
4167 5368 6.494835 ACAAGGCTGTTTCTTCAATATCCTTT 59.505 34.615 0.00 0.00 28.57 3.11
4197 5400 5.747342 TCTACCCCCAATGTATGTTACAAC 58.253 41.667 0.00 0.00 42.76 3.32
4372 5584 1.530323 ATCCAACCGGTTGCTAACAC 58.470 50.000 36.83 0.00 39.16 3.32
4373 5585 0.180642 TCCAACCGGTTGCTAACACA 59.819 50.000 36.83 13.96 39.16 3.72
4396 5608 2.159043 ACATATCTCTGAACGCAGGTGG 60.159 50.000 0.00 0.00 42.53 4.61
4534 5783 3.569194 TGTTGCTCACCCAACTTTCTA 57.431 42.857 6.59 0.00 44.12 2.10
4545 5797 3.372025 CCCAACTTTCTAATCTCCAGGGG 60.372 52.174 0.00 0.00 0.00 4.79
4646 5898 1.884579 CACAATGCTGCCCATATCCTC 59.115 52.381 0.00 0.00 32.67 3.71
4647 5899 1.779092 ACAATGCTGCCCATATCCTCT 59.221 47.619 0.00 0.00 32.67 3.69
4657 5909 3.303938 CCCATATCCTCTGTCTGTCTGT 58.696 50.000 0.00 0.00 0.00 3.41
4658 5910 3.320541 CCCATATCCTCTGTCTGTCTGTC 59.679 52.174 0.00 0.00 0.00 3.51
4659 5911 3.004210 CCATATCCTCTGTCTGTCTGTCG 59.996 52.174 0.00 0.00 0.00 4.35
4660 5912 2.498644 ATCCTCTGTCTGTCTGTCGA 57.501 50.000 0.00 0.00 0.00 4.20
4661 5913 2.271944 TCCTCTGTCTGTCTGTCGAA 57.728 50.000 0.00 0.00 0.00 3.71
4662 5914 2.155279 TCCTCTGTCTGTCTGTCGAAG 58.845 52.381 0.00 0.00 0.00 3.79
4665 5917 2.294791 CTCTGTCTGTCTGTCGAAGGTT 59.705 50.000 0.00 0.00 0.00 3.50
4667 5919 2.797156 CTGTCTGTCTGTCGAAGGTTTG 59.203 50.000 0.00 0.00 0.00 2.93
4669 5921 2.795470 GTCTGTCTGTCGAAGGTTTGTC 59.205 50.000 0.00 0.00 0.00 3.18
4670 5922 1.787155 CTGTCTGTCGAAGGTTTGTCG 59.213 52.381 0.00 0.00 39.88 4.35
4671 5923 0.507358 GTCTGTCGAAGGTTTGTCGC 59.493 55.000 0.00 0.00 38.39 5.19
4673 5925 0.784778 CTGTCGAAGGTTTGTCGCTC 59.215 55.000 0.00 0.00 38.39 5.03
4674 5926 0.103390 TGTCGAAGGTTTGTCGCTCA 59.897 50.000 0.00 0.00 38.39 4.26
4676 5928 1.126846 GTCGAAGGTTTGTCGCTCATG 59.873 52.381 0.00 0.00 38.39 3.07
4677 5929 1.148310 CGAAGGTTTGTCGCTCATGT 58.852 50.000 0.00 0.00 0.00 3.21
4678 5930 1.126846 CGAAGGTTTGTCGCTCATGTC 59.873 52.381 0.00 0.00 0.00 3.06
4679 5931 1.464997 GAAGGTTTGTCGCTCATGTCC 59.535 52.381 0.00 0.00 0.00 4.02
4680 5932 0.396435 AGGTTTGTCGCTCATGTCCA 59.604 50.000 0.00 0.00 0.00 4.02
4681 5933 1.003580 AGGTTTGTCGCTCATGTCCAT 59.996 47.619 0.00 0.00 0.00 3.41
4682 5934 1.131126 GGTTTGTCGCTCATGTCCATG 59.869 52.381 0.71 0.71 40.09 3.66
4683 5935 1.806542 GTTTGTCGCTCATGTCCATGT 59.193 47.619 7.13 0.00 39.72 3.21
4684 5936 3.000041 GTTTGTCGCTCATGTCCATGTA 59.000 45.455 7.13 0.00 39.72 2.29
4685 5937 3.541996 TTGTCGCTCATGTCCATGTAT 57.458 42.857 7.13 0.00 39.72 2.29
4686 5938 2.825205 TGTCGCTCATGTCCATGTATG 58.175 47.619 7.13 0.00 39.72 2.39
4687 5939 2.430332 TGTCGCTCATGTCCATGTATGA 59.570 45.455 7.13 0.00 39.72 2.15
4688 5940 2.797156 GTCGCTCATGTCCATGTATGAC 59.203 50.000 7.13 9.09 39.72 3.06
4689 5941 2.695147 TCGCTCATGTCCATGTATGACT 59.305 45.455 7.13 0.00 39.72 3.41
4690 5942 3.055591 CGCTCATGTCCATGTATGACTC 58.944 50.000 7.13 0.00 39.72 3.36
4691 5943 3.243670 CGCTCATGTCCATGTATGACTCT 60.244 47.826 7.13 0.00 39.72 3.24
4692 5944 4.701765 GCTCATGTCCATGTATGACTCTT 58.298 43.478 7.13 0.00 39.72 2.85
4707 5959 4.326826 TGACTCTTCCCATTCACACAATC 58.673 43.478 0.00 0.00 0.00 2.67
4715 5967 4.041567 TCCCATTCACACAATCACTGTACT 59.958 41.667 0.00 0.00 36.10 2.73
4721 5973 6.161855 TCACACAATCACTGTACTCTCTTT 57.838 37.500 0.00 0.00 36.10 2.52
4722 5974 6.216569 TCACACAATCACTGTACTCTCTTTC 58.783 40.000 0.00 0.00 36.10 2.62
4822 6075 7.413438 CGAAATGGATTACAGTTTTCTCCAGAG 60.413 40.741 0.00 0.00 37.53 3.35
4823 6076 6.627087 ATGGATTACAGTTTTCTCCAGAGA 57.373 37.500 0.00 0.00 39.25 3.10
4828 6081 3.582164 ACAGTTTTCTCCAGAGACTCCT 58.418 45.455 0.00 0.00 37.14 3.69
4853 6106 2.430332 AGAGAGGCACAGAGACTAATGC 59.570 50.000 0.00 0.00 33.72 3.56
4869 6122 1.774894 ATGCCCACCACGGTTGTAGT 61.775 55.000 0.00 0.00 0.00 2.73
4873 6126 1.406341 CCCACCACGGTTGTAGTATGG 60.406 57.143 0.00 0.00 36.46 2.74
4877 6154 2.762327 ACCACGGTTGTAGTATGGGTAG 59.238 50.000 0.00 0.00 34.56 3.18
4878 6155 2.762327 CCACGGTTGTAGTATGGGTAGT 59.238 50.000 0.00 0.00 0.00 2.73
4900 6179 6.715280 AGTGACAAAATGGATCTGTAGTGAT 58.285 36.000 0.00 0.00 0.00 3.06
4901 6180 6.820656 AGTGACAAAATGGATCTGTAGTGATC 59.179 38.462 0.00 0.00 41.39 2.92
4905 6184 7.851228 ACAAAATGGATCTGTAGTGATCTGTA 58.149 34.615 0.00 0.00 41.72 2.74
4907 6186 5.720371 ATGGATCTGTAGTGATCTGTAGC 57.280 43.478 0.00 0.00 41.72 3.58
4908 6187 3.565902 TGGATCTGTAGTGATCTGTAGCG 59.434 47.826 0.00 0.00 41.72 4.26
4910 6189 2.365582 TCTGTAGTGATCTGTAGCGCA 58.634 47.619 11.47 0.00 0.00 6.09
4911 6190 2.356069 TCTGTAGTGATCTGTAGCGCAG 59.644 50.000 11.47 0.00 46.34 5.18
4913 6192 1.405821 GTAGTGATCTGTAGCGCAGGT 59.594 52.381 11.47 0.00 45.08 4.00
4917 6196 1.819229 ATCTGTAGCGCAGGTCTGG 59.181 57.895 11.47 0.00 45.08 3.86
4918 6197 0.684479 ATCTGTAGCGCAGGTCTGGA 60.684 55.000 11.47 0.00 45.08 3.86
4920 6199 0.737715 CTGTAGCGCAGGTCTGGAAC 60.738 60.000 11.47 0.00 41.42 3.62
4921 6200 1.185618 TGTAGCGCAGGTCTGGAACT 61.186 55.000 11.47 0.00 40.68 3.01
4922 6201 0.458716 GTAGCGCAGGTCTGGAACTC 60.459 60.000 11.47 0.00 40.68 3.01
4923 6202 0.898326 TAGCGCAGGTCTGGAACTCA 60.898 55.000 11.47 0.00 40.68 3.41
4924 6203 2.029844 GCGCAGGTCTGGAACTCAC 61.030 63.158 0.30 0.00 0.00 3.51
4925 6204 1.367471 CGCAGGTCTGGAACTCACA 59.633 57.895 0.00 0.00 0.00 3.58
4926 6205 0.946221 CGCAGGTCTGGAACTCACAC 60.946 60.000 0.00 0.00 0.00 3.82
4927 6206 0.394565 GCAGGTCTGGAACTCACACT 59.605 55.000 0.00 0.00 0.00 3.55
4928 6207 1.606737 GCAGGTCTGGAACTCACACTC 60.607 57.143 0.00 0.00 0.00 3.51
4929 6208 1.688735 CAGGTCTGGAACTCACACTCA 59.311 52.381 0.00 0.00 0.00 3.41
4955 9478 1.541379 ATTTTAGACCCCGTGTTGGC 58.459 50.000 0.00 0.00 35.87 4.52
4959 9482 4.265056 GACCCCGTGTTGGCTGGT 62.265 66.667 0.00 0.00 35.20 4.00
4960 9483 3.785122 GACCCCGTGTTGGCTGGTT 62.785 63.158 0.00 0.00 32.88 3.67
4961 9484 3.294493 CCCCGTGTTGGCTGGTTG 61.294 66.667 0.00 0.00 35.87 3.77
4962 9485 3.294493 CCCGTGTTGGCTGGTTGG 61.294 66.667 0.00 0.00 35.87 3.77
4978 9503 2.159226 GGTTGGACCTCGACATACAGAG 60.159 54.545 0.00 0.00 34.73 3.35
4984 9509 4.438472 GGACCTCGACATACAGAGTACAAC 60.438 50.000 0.00 0.00 32.88 3.32
4988 9513 5.393135 CCTCGACATACAGAGTACAACACAT 60.393 44.000 0.00 0.00 32.88 3.21
5061 9587 2.508526 TGCAAGGAGGAGAAAGAAAGC 58.491 47.619 0.00 0.00 0.00 3.51
5064 9590 3.808618 GCAAGGAGGAGAAAGAAAGCAGA 60.809 47.826 0.00 0.00 0.00 4.26
5095 9622 3.554934 TCAGCACTGGAAAACATTCTGT 58.445 40.909 0.00 0.00 0.00 3.41
5130 9657 7.914427 ACTGGACTCCACTTGTAATATATCA 57.086 36.000 0.00 0.00 0.00 2.15
5227 9756 3.550437 ATCCGATCTCTTCACTTTGGG 57.450 47.619 0.00 0.00 0.00 4.12
5270 9800 1.406205 GGTGCTCCCTTTCTCTACTGC 60.406 57.143 0.00 0.00 0.00 4.40
5296 9826 2.434134 CGCTGCGTACGTGGAGTTC 61.434 63.158 17.90 0.00 0.00 3.01
5297 9827 1.080705 GCTGCGTACGTGGAGTTCT 60.081 57.895 17.90 0.00 0.00 3.01
5373 9903 7.497249 ACAATAATATCCTGTGAGTTTCAGCTC 59.503 37.037 0.00 0.00 36.12 4.09
5387 9917 1.168714 CAGCTCGGAAAAGAAAGGGG 58.831 55.000 0.00 0.00 0.00 4.79
5404 9934 3.510459 AGGGGGTTTTGAATGAAGAAGG 58.490 45.455 0.00 0.00 0.00 3.46
5426 9956 4.081309 GGAAAGGGTATAGTGTGCAGTACA 60.081 45.833 0.00 0.00 36.82 2.90
5454 9989 2.095252 GTCTCTCTTCGCGGGCAAC 61.095 63.158 6.13 0.00 0.00 4.17
5469 10004 3.797353 AACGGGCGATGGATGGCT 61.797 61.111 0.00 0.00 0.00 4.75
5472 10007 4.881440 GGGCGATGGATGGCTGCA 62.881 66.667 0.50 0.00 0.00 4.41
5473 10008 3.589881 GGCGATGGATGGCTGCAC 61.590 66.667 0.50 0.00 0.00 4.57
5475 10010 3.274586 CGATGGATGGCTGCACGG 61.275 66.667 0.50 0.00 0.00 4.94
5476 10011 2.903855 GATGGATGGCTGCACGGG 60.904 66.667 0.50 0.00 0.00 5.28
5561 10096 4.597032 CAAGTGGCTTGGTTCCCA 57.403 55.556 1.23 0.00 37.77 4.37
5562 10097 3.056213 CAAGTGGCTTGGTTCCCAT 57.944 52.632 1.23 0.00 37.77 4.00
5563 10098 0.890683 CAAGTGGCTTGGTTCCCATC 59.109 55.000 1.23 0.00 37.77 3.51
5564 10099 0.482446 AAGTGGCTTGGTTCCCATCA 59.518 50.000 0.00 0.00 31.53 3.07
5565 10100 0.251341 AGTGGCTTGGTTCCCATCAC 60.251 55.000 0.00 0.00 31.53 3.06
5566 10101 0.251341 GTGGCTTGGTTCCCATCACT 60.251 55.000 0.00 0.00 31.53 3.41
5567 10102 0.482446 TGGCTTGGTTCCCATCACTT 59.518 50.000 0.00 0.00 31.53 3.16
5568 10103 0.890683 GGCTTGGTTCCCATCACTTG 59.109 55.000 0.00 0.00 31.53 3.16
5625 10160 4.970662 TTACAGTGGGAGTATCACGTAC 57.029 45.455 0.00 0.00 46.19 3.67
5628 10163 2.358267 CAGTGGGAGTATCACGTACCTC 59.642 54.545 0.00 0.00 46.19 3.85
5632 10167 2.557490 GGGAGTATCACGTACCTCCATC 59.443 54.545 18.16 4.41 36.25 3.51
5637 10172 5.141182 AGTATCACGTACCTCCATCTCAAT 58.859 41.667 0.00 0.00 33.58 2.57
5642 10177 7.776618 TCACGTACCTCCATCTCAATAATAT 57.223 36.000 0.00 0.00 0.00 1.28
5649 10185 7.982252 ACCTCCATCTCAATAATATGTGTGAT 58.018 34.615 0.00 0.00 0.00 3.06
5678 10214 3.034721 AGACCGCGACACTTATTTTGA 57.965 42.857 8.23 0.00 0.00 2.69
5681 10217 4.092968 AGACCGCGACACTTATTTTGAATC 59.907 41.667 8.23 0.00 0.00 2.52
5682 10218 3.181524 ACCGCGACACTTATTTTGAATCG 60.182 43.478 8.23 0.00 0.00 3.34
5683 10219 3.342269 CGCGACACTTATTTTGAATCGG 58.658 45.455 0.00 0.00 0.00 4.18
5684 10220 3.061563 CGCGACACTTATTTTGAATCGGA 59.938 43.478 0.00 0.00 0.00 4.55
5685 10221 4.578601 GCGACACTTATTTTGAATCGGAG 58.421 43.478 0.00 0.00 0.00 4.63
5686 10222 4.328983 GCGACACTTATTTTGAATCGGAGA 59.671 41.667 0.00 0.00 45.75 3.71
5687 10223 5.500931 GCGACACTTATTTTGAATCGGAGAG 60.501 44.000 0.00 0.00 43.63 3.20
5688 10224 5.805486 CGACACTTATTTTGAATCGGAGAGA 59.195 40.000 0.00 0.00 43.63 3.10
5689 10225 6.020281 CGACACTTATTTTGAATCGGAGAGAG 60.020 42.308 0.00 0.00 43.63 3.20
5690 10226 6.702329 ACACTTATTTTGAATCGGAGAGAGT 58.298 36.000 0.00 0.00 43.63 3.24
5691 10227 7.837863 ACACTTATTTTGAATCGGAGAGAGTA 58.162 34.615 0.00 0.00 43.63 2.59
5692 10228 7.760340 ACACTTATTTTGAATCGGAGAGAGTAC 59.240 37.037 0.00 0.00 43.63 2.73
5693 10229 7.976734 CACTTATTTTGAATCGGAGAGAGTACT 59.023 37.037 0.00 0.00 43.63 2.73
5694 10230 9.186837 ACTTATTTTGAATCGGAGAGAGTACTA 57.813 33.333 0.00 0.00 43.63 1.82
5695 10231 9.672086 CTTATTTTGAATCGGAGAGAGTACTAG 57.328 37.037 0.00 0.00 43.63 2.57
5696 10232 7.648039 ATTTTGAATCGGAGAGAGTACTAGT 57.352 36.000 0.00 0.00 43.63 2.57
5697 10233 6.438259 TTTGAATCGGAGAGAGTACTAGTG 57.562 41.667 5.39 0.00 43.63 2.74
5698 10234 5.100344 TGAATCGGAGAGAGTACTAGTGT 57.900 43.478 5.39 0.00 43.63 3.55
5699 10235 5.498393 TGAATCGGAGAGAGTACTAGTGTT 58.502 41.667 5.39 0.00 43.63 3.32
5700 10236 5.944599 TGAATCGGAGAGAGTACTAGTGTTT 59.055 40.000 5.39 0.00 43.63 2.83
5701 10237 7.108194 TGAATCGGAGAGAGTACTAGTGTTTA 58.892 38.462 5.39 0.00 43.63 2.01
5702 10238 7.609146 TGAATCGGAGAGAGTACTAGTGTTTAA 59.391 37.037 5.39 0.00 43.63 1.52
5703 10239 6.734104 TCGGAGAGAGTACTAGTGTTTAAC 57.266 41.667 5.39 0.00 0.00 2.01
5704 10240 6.471146 TCGGAGAGAGTACTAGTGTTTAACT 58.529 40.000 5.39 0.00 43.40 2.24
5705 10241 6.939163 TCGGAGAGAGTACTAGTGTTTAACTT 59.061 38.462 5.39 0.00 40.56 2.66
5706 10242 7.022384 CGGAGAGAGTACTAGTGTTTAACTTG 58.978 42.308 5.39 0.00 40.56 3.16
5707 10243 7.094890 CGGAGAGAGTACTAGTGTTTAACTTGA 60.095 40.741 5.39 0.00 40.56 3.02
5708 10244 8.022550 GGAGAGAGTACTAGTGTTTAACTTGAC 58.977 40.741 5.39 0.00 40.56 3.18
5709 10245 7.884257 AGAGAGTACTAGTGTTTAACTTGACC 58.116 38.462 5.39 0.00 40.56 4.02
5710 10246 6.990798 AGAGTACTAGTGTTTAACTTGACCC 58.009 40.000 5.39 0.00 40.56 4.46
5711 10247 6.552350 AGAGTACTAGTGTTTAACTTGACCCA 59.448 38.462 5.39 0.00 40.56 4.51
5712 10248 7.234988 AGAGTACTAGTGTTTAACTTGACCCAT 59.765 37.037 5.39 0.00 40.56 4.00
5713 10249 7.742767 AGTACTAGTGTTTAACTTGACCCATT 58.257 34.615 5.39 0.00 40.56 3.16
5714 10250 6.877611 ACTAGTGTTTAACTTGACCCATTG 57.122 37.500 0.00 0.00 40.56 2.82
5715 10251 6.362248 ACTAGTGTTTAACTTGACCCATTGT 58.638 36.000 0.00 0.00 40.56 2.71
5716 10252 5.514274 AGTGTTTAACTTGACCCATTGTG 57.486 39.130 0.00 0.00 34.57 3.33
5717 10253 4.340950 AGTGTTTAACTTGACCCATTGTGG 59.659 41.667 0.00 0.00 34.57 4.17
5718 10254 3.068873 TGTTTAACTTGACCCATTGTGGC 59.931 43.478 0.00 0.00 35.79 5.01
5719 10255 2.969821 TAACTTGACCCATTGTGGCT 57.030 45.000 0.00 0.00 35.79 4.75
5720 10256 2.086610 AACTTGACCCATTGTGGCTT 57.913 45.000 0.00 0.00 35.79 4.35
5721 10257 1.331214 ACTTGACCCATTGTGGCTTG 58.669 50.000 0.00 0.00 35.79 4.01
5722 10258 1.331214 CTTGACCCATTGTGGCTTGT 58.669 50.000 0.00 0.00 35.79 3.16
5723 10259 1.000060 CTTGACCCATTGTGGCTTGTG 60.000 52.381 0.00 0.00 35.79 3.33
5724 10260 0.106268 TGACCCATTGTGGCTTGTGT 60.106 50.000 0.00 0.00 35.79 3.72
5725 10261 0.314935 GACCCATTGTGGCTTGTGTG 59.685 55.000 0.00 0.00 35.79 3.82
5726 10262 1.005867 CCCATTGTGGCTTGTGTGC 60.006 57.895 0.00 0.00 35.79 4.57
5734 10270 3.616595 GCTTGTGTGCCTTTTGCG 58.383 55.556 0.00 0.00 45.60 4.85
5735 10271 1.226945 GCTTGTGTGCCTTTTGCGT 60.227 52.632 0.00 0.00 45.60 5.24
5736 10272 1.481819 GCTTGTGTGCCTTTTGCGTG 61.482 55.000 0.00 0.00 45.60 5.34
5737 10273 0.179140 CTTGTGTGCCTTTTGCGTGT 60.179 50.000 0.00 0.00 45.60 4.49
5738 10274 0.244994 TTGTGTGCCTTTTGCGTGTT 59.755 45.000 0.00 0.00 45.60 3.32
5739 10275 0.244994 TGTGTGCCTTTTGCGTGTTT 59.755 45.000 0.00 0.00 45.60 2.83
5740 10276 0.644843 GTGTGCCTTTTGCGTGTTTG 59.355 50.000 0.00 0.00 45.60 2.93
5741 10277 1.080995 TGTGCCTTTTGCGTGTTTGC 61.081 50.000 0.00 0.00 45.60 3.68
5742 10278 1.520342 TGCCTTTTGCGTGTTTGCC 60.520 52.632 0.00 0.00 45.60 4.52
5743 10279 1.227234 GCCTTTTGCGTGTTTGCCT 60.227 52.632 0.00 0.00 0.00 4.75
5744 10280 1.489881 GCCTTTTGCGTGTTTGCCTG 61.490 55.000 0.00 0.00 0.00 4.85
5745 10281 0.179113 CCTTTTGCGTGTTTGCCTGT 60.179 50.000 0.00 0.00 0.00 4.00
5746 10282 0.922717 CTTTTGCGTGTTTGCCTGTG 59.077 50.000 0.00 0.00 0.00 3.66
5747 10283 1.080995 TTTTGCGTGTTTGCCTGTGC 61.081 50.000 0.00 0.00 38.26 4.57
5748 10284 3.748071 TTGCGTGTTTGCCTGTGCG 62.748 57.895 0.00 0.00 41.78 5.34
5750 10286 4.980903 CGTGTTTGCCTGTGCGCC 62.981 66.667 4.18 0.00 41.78 6.53
5751 10287 3.898509 GTGTTTGCCTGTGCGCCA 61.899 61.111 4.18 0.90 41.78 5.69
5752 10288 3.143515 TGTTTGCCTGTGCGCCAA 61.144 55.556 4.18 0.00 41.78 4.52
5753 10289 2.339712 GTTTGCCTGTGCGCCAAT 59.660 55.556 4.18 0.00 41.78 3.16
5754 10290 2.023223 GTTTGCCTGTGCGCCAATG 61.023 57.895 4.18 0.00 41.78 2.82
5755 10291 2.497173 TTTGCCTGTGCGCCAATGT 61.497 52.632 4.18 0.00 41.78 2.71
5756 10292 2.696409 TTTGCCTGTGCGCCAATGTG 62.696 55.000 4.18 0.00 41.78 3.21
5763 10299 2.572812 GCGCCAATGTGCCATTGA 59.427 55.556 22.11 0.00 42.25 2.57
5764 10300 1.142314 GCGCCAATGTGCCATTGAT 59.858 52.632 22.11 0.00 42.25 2.57
5765 10301 0.385029 GCGCCAATGTGCCATTGATA 59.615 50.000 22.11 0.00 42.25 2.15
5766 10302 1.202394 GCGCCAATGTGCCATTGATAA 60.202 47.619 22.11 0.00 42.25 1.75
5767 10303 2.546373 GCGCCAATGTGCCATTGATAAT 60.546 45.455 22.11 0.00 42.25 1.28
5768 10304 3.719924 CGCCAATGTGCCATTGATAATT 58.280 40.909 22.11 0.00 0.00 1.40
5769 10305 3.737266 CGCCAATGTGCCATTGATAATTC 59.263 43.478 22.11 8.55 0.00 2.17
5770 10306 4.060205 GCCAATGTGCCATTGATAATTCC 58.940 43.478 22.11 5.15 0.00 3.01
5771 10307 4.634199 CCAATGTGCCATTGATAATTCCC 58.366 43.478 22.11 0.00 0.00 3.97
5772 10308 4.101274 CCAATGTGCCATTGATAATTCCCA 59.899 41.667 22.11 0.00 0.00 4.37
5773 10309 5.396548 CCAATGTGCCATTGATAATTCCCAA 60.397 40.000 22.11 0.00 0.00 4.12
5774 10310 5.540400 ATGTGCCATTGATAATTCCCAAG 57.460 39.130 0.00 0.00 0.00 3.61
5775 10311 3.705579 TGTGCCATTGATAATTCCCAAGG 59.294 43.478 0.00 0.00 0.00 3.61
5776 10312 3.960102 GTGCCATTGATAATTCCCAAGGA 59.040 43.478 6.11 0.00 0.00 3.36
5777 10313 4.405358 GTGCCATTGATAATTCCCAAGGAA 59.595 41.667 0.00 0.00 46.39 3.36
5778 10314 5.028802 TGCCATTGATAATTCCCAAGGAAA 58.971 37.500 0.00 0.00 45.41 3.13
5779 10315 5.129155 TGCCATTGATAATTCCCAAGGAAAG 59.871 40.000 0.00 0.00 45.41 2.62
5780 10316 5.604565 CCATTGATAATTCCCAAGGAAAGC 58.395 41.667 0.00 0.00 45.41 3.51
5781 10317 5.364735 CCATTGATAATTCCCAAGGAAAGCT 59.635 40.000 0.00 0.00 45.41 3.74
5782 10318 5.920193 TTGATAATTCCCAAGGAAAGCTG 57.080 39.130 0.00 0.00 45.41 4.24
5783 10319 3.701040 TGATAATTCCCAAGGAAAGCTGC 59.299 43.478 0.00 0.00 45.41 5.25
5784 10320 0.890683 AATTCCCAAGGAAAGCTGCG 59.109 50.000 0.00 0.00 45.41 5.18
5785 10321 0.251341 ATTCCCAAGGAAAGCTGCGT 60.251 50.000 0.00 0.00 45.41 5.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.308014 AAGAGGCACGGCTCTCAGC 62.308 63.158 21.85 0.00 41.46 4.26
2 3 1.447489 CAAGAGGCACGGCTCTCAG 60.447 63.158 21.85 14.28 31.57 3.35
4 5 0.320771 TTTCAAGAGGCACGGCTCTC 60.321 55.000 21.85 9.39 0.00 3.20
5 6 0.108585 TTTTCAAGAGGCACGGCTCT 59.891 50.000 16.75 16.75 0.00 4.09
6 7 0.238553 GTTTTCAAGAGGCACGGCTC 59.761 55.000 12.42 12.42 0.00 4.70
7 8 1.507141 CGTTTTCAAGAGGCACGGCT 61.507 55.000 0.00 0.00 0.00 5.52
8 9 1.082104 CGTTTTCAAGAGGCACGGC 60.082 57.895 0.00 0.00 0.00 5.68
10 11 2.748461 TTTCGTTTTCAAGAGGCACG 57.252 45.000 0.00 0.00 0.00 5.34
11 12 4.803613 ACATTTTTCGTTTTCAAGAGGCAC 59.196 37.500 0.00 0.00 0.00 5.01
12 13 4.803088 CACATTTTTCGTTTTCAAGAGGCA 59.197 37.500 0.00 0.00 0.00 4.75
13 14 4.803613 ACACATTTTTCGTTTTCAAGAGGC 59.196 37.500 0.00 0.00 0.00 4.70
14 15 6.885735 AACACATTTTTCGTTTTCAAGAGG 57.114 33.333 0.00 0.00 0.00 3.69
40 41 9.615295 GCAAAACCGTAACTCTTATGAAATAAA 57.385 29.630 0.00 0.00 38.53 1.40
41 42 9.005777 AGCAAAACCGTAACTCTTATGAAATAA 57.994 29.630 0.00 0.00 36.20 1.40
42 43 8.556213 AGCAAAACCGTAACTCTTATGAAATA 57.444 30.769 0.00 0.00 0.00 1.40
43 44 7.448748 AGCAAAACCGTAACTCTTATGAAAT 57.551 32.000 0.00 0.00 0.00 2.17
44 45 6.870971 AGCAAAACCGTAACTCTTATGAAA 57.129 33.333 0.00 0.00 0.00 2.69
45 46 6.870971 AAGCAAAACCGTAACTCTTATGAA 57.129 33.333 0.00 0.00 0.00 2.57
46 47 6.483974 TGAAAGCAAAACCGTAACTCTTATGA 59.516 34.615 0.00 0.00 0.00 2.15
47 48 6.664515 TGAAAGCAAAACCGTAACTCTTATG 58.335 36.000 0.00 0.00 0.00 1.90
48 49 6.870971 TGAAAGCAAAACCGTAACTCTTAT 57.129 33.333 0.00 0.00 0.00 1.73
49 50 6.483974 TCATGAAAGCAAAACCGTAACTCTTA 59.516 34.615 0.00 0.00 0.00 2.10
50 51 5.298276 TCATGAAAGCAAAACCGTAACTCTT 59.702 36.000 0.00 0.00 0.00 2.85
51 52 4.819630 TCATGAAAGCAAAACCGTAACTCT 59.180 37.500 0.00 0.00 0.00 3.24
52 53 5.049680 TCTCATGAAAGCAAAACCGTAACTC 60.050 40.000 0.00 0.00 0.00 3.01
53 54 4.819630 TCTCATGAAAGCAAAACCGTAACT 59.180 37.500 0.00 0.00 0.00 2.24
54 55 5.103290 TCTCATGAAAGCAAAACCGTAAC 57.897 39.130 0.00 0.00 0.00 2.50
55 56 4.320202 GCTCTCATGAAAGCAAAACCGTAA 60.320 41.667 16.25 0.00 38.42 3.18
56 57 3.188460 GCTCTCATGAAAGCAAAACCGTA 59.812 43.478 16.25 0.00 38.42 4.02
57 58 2.030805 GCTCTCATGAAAGCAAAACCGT 60.031 45.455 16.25 0.00 38.42 4.83
58 59 2.589014 GCTCTCATGAAAGCAAAACCG 58.411 47.619 16.25 0.00 38.42 4.44
59 60 2.297033 TGGCTCTCATGAAAGCAAAACC 59.703 45.455 22.09 5.41 40.36 3.27
60 61 3.311966 GTGGCTCTCATGAAAGCAAAAC 58.688 45.455 22.09 12.97 40.36 2.43
61 62 2.030893 CGTGGCTCTCATGAAAGCAAAA 60.031 45.455 22.09 4.89 40.36 2.44
62 63 1.536766 CGTGGCTCTCATGAAAGCAAA 59.463 47.619 22.09 7.41 40.36 3.68
63 64 1.159285 CGTGGCTCTCATGAAAGCAA 58.841 50.000 22.09 8.87 40.36 3.91
64 65 0.674581 CCGTGGCTCTCATGAAAGCA 60.675 55.000 22.09 6.25 40.36 3.91
65 66 0.674895 ACCGTGGCTCTCATGAAAGC 60.675 55.000 12.84 12.84 37.80 3.51
66 67 1.338105 TGACCGTGGCTCTCATGAAAG 60.338 52.381 0.00 0.00 34.35 2.62
67 68 0.684535 TGACCGTGGCTCTCATGAAA 59.315 50.000 0.00 0.00 34.35 2.69
68 69 0.904649 ATGACCGTGGCTCTCATGAA 59.095 50.000 0.00 0.00 34.35 2.57
69 70 0.176449 CATGACCGTGGCTCTCATGA 59.824 55.000 10.82 0.00 42.65 3.07
70 71 1.434622 GCATGACCGTGGCTCTCATG 61.435 60.000 11.62 11.62 42.82 3.07
71 72 1.153289 GCATGACCGTGGCTCTCAT 60.153 57.895 0.00 0.00 0.00 2.90
72 73 1.830587 AAGCATGACCGTGGCTCTCA 61.831 55.000 0.00 0.00 36.76 3.27
73 74 0.674895 AAAGCATGACCGTGGCTCTC 60.675 55.000 0.00 0.00 36.76 3.20
74 75 0.674895 GAAAGCATGACCGTGGCTCT 60.675 55.000 0.00 0.00 36.76 4.09
75 76 0.955428 TGAAAGCATGACCGTGGCTC 60.955 55.000 0.00 0.00 36.76 4.70
76 77 1.073025 TGAAAGCATGACCGTGGCT 59.927 52.632 0.00 0.00 40.14 4.75
77 78 1.210155 GTGAAAGCATGACCGTGGC 59.790 57.895 0.00 0.00 0.00 5.01
78 79 0.948623 TCGTGAAAGCATGACCGTGG 60.949 55.000 0.00 0.00 35.19 4.94
79 80 0.439985 CTCGTGAAAGCATGACCGTG 59.560 55.000 0.00 0.00 35.19 4.94
80 81 0.317160 TCTCGTGAAAGCATGACCGT 59.683 50.000 0.00 0.00 35.19 4.83
81 82 0.994995 CTCTCGTGAAAGCATGACCG 59.005 55.000 0.00 0.00 35.19 4.79
82 83 1.338200 ACCTCTCGTGAAAGCATGACC 60.338 52.381 0.00 0.00 35.19 4.02
83 84 1.996191 GACCTCTCGTGAAAGCATGAC 59.004 52.381 0.00 0.00 35.19 3.06
84 85 1.402852 CGACCTCTCGTGAAAGCATGA 60.403 52.381 0.00 0.00 37.70 3.07
85 86 0.994995 CGACCTCTCGTGAAAGCATG 59.005 55.000 0.00 0.00 35.00 4.06
86 87 3.425578 CGACCTCTCGTGAAAGCAT 57.574 52.632 0.00 0.00 35.00 3.79
87 88 4.966005 CGACCTCTCGTGAAAGCA 57.034 55.556 0.00 0.00 35.00 3.91
100 101 1.878953 TTTTTCTGAGAGGCACGACC 58.121 50.000 0.00 0.00 39.61 4.79
149 150 5.583932 AGCCCTTGGATTAGTCTCATTTTT 58.416 37.500 0.00 0.00 0.00 1.94
150 151 5.198602 AGCCCTTGGATTAGTCTCATTTT 57.801 39.130 0.00 0.00 0.00 1.82
151 152 4.870021 AGCCCTTGGATTAGTCTCATTT 57.130 40.909 0.00 0.00 0.00 2.32
152 153 5.398012 GGTTAGCCCTTGGATTAGTCTCATT 60.398 44.000 0.00 0.00 0.00 2.57
153 154 4.103311 GGTTAGCCCTTGGATTAGTCTCAT 59.897 45.833 0.00 0.00 0.00 2.90
154 155 3.454812 GGTTAGCCCTTGGATTAGTCTCA 59.545 47.826 0.00 0.00 0.00 3.27
155 156 4.074627 GGTTAGCCCTTGGATTAGTCTC 57.925 50.000 0.00 0.00 0.00 3.36
169 170 0.679960 AATGCCAACGAGGGTTAGCC 60.680 55.000 0.00 0.00 39.61 3.93
170 171 1.132453 GAAATGCCAACGAGGGTTAGC 59.868 52.381 0.00 0.00 40.57 3.09
171 172 2.711542 AGAAATGCCAACGAGGGTTAG 58.288 47.619 0.00 0.00 38.09 2.34
172 173 2.871096 AGAAATGCCAACGAGGGTTA 57.129 45.000 0.00 0.00 38.09 2.85
173 174 1.995376 AAGAAATGCCAACGAGGGTT 58.005 45.000 0.00 0.00 38.09 4.11
174 175 1.995376 AAAGAAATGCCAACGAGGGT 58.005 45.000 0.00 0.00 38.09 4.34
175 176 4.275936 CCTATAAAGAAATGCCAACGAGGG 59.724 45.833 0.00 0.00 38.09 4.30
176 177 5.123227 TCCTATAAAGAAATGCCAACGAGG 58.877 41.667 0.00 0.00 41.84 4.63
177 178 6.049149 TCTCCTATAAAGAAATGCCAACGAG 58.951 40.000 0.00 0.00 0.00 4.18
178 179 5.984725 TCTCCTATAAAGAAATGCCAACGA 58.015 37.500 0.00 0.00 0.00 3.85
179 180 6.677781 TTCTCCTATAAAGAAATGCCAACG 57.322 37.500 0.00 0.00 30.00 4.10
180 181 8.056407 AGTTTCTCCTATAAAGAAATGCCAAC 57.944 34.615 11.24 2.05 42.82 3.77
181 182 8.109634 AGAGTTTCTCCTATAAAGAAATGCCAA 58.890 33.333 11.24 0.00 42.82 4.52
182 183 7.633789 AGAGTTTCTCCTATAAAGAAATGCCA 58.366 34.615 11.24 0.00 42.82 4.92
183 184 9.785982 ATAGAGTTTCTCCTATAAAGAAATGCC 57.214 33.333 11.24 6.12 42.82 4.40
188 189 9.201989 TGCTCATAGAGTTTCTCCTATAAAGAA 57.798 33.333 0.00 0.00 31.39 2.52
189 190 8.634444 GTGCTCATAGAGTTTCTCCTATAAAGA 58.366 37.037 0.00 0.00 31.39 2.52
190 191 7.870445 GGTGCTCATAGAGTTTCTCCTATAAAG 59.130 40.741 0.00 0.00 31.39 1.85
191 192 7.470147 CGGTGCTCATAGAGTTTCTCCTATAAA 60.470 40.741 0.00 0.00 31.39 1.40
192 193 6.016192 CGGTGCTCATAGAGTTTCTCCTATAA 60.016 42.308 0.00 0.00 31.39 0.98
193 194 5.473846 CGGTGCTCATAGAGTTTCTCCTATA 59.526 44.000 0.00 0.00 31.39 1.31
194 195 4.279671 CGGTGCTCATAGAGTTTCTCCTAT 59.720 45.833 0.00 0.00 31.39 2.57
195 196 3.632604 CGGTGCTCATAGAGTTTCTCCTA 59.367 47.826 0.00 0.00 31.39 2.94
196 197 2.428890 CGGTGCTCATAGAGTTTCTCCT 59.571 50.000 0.00 0.00 31.39 3.69
197 198 2.815478 CGGTGCTCATAGAGTTTCTCC 58.185 52.381 0.00 0.00 31.39 3.71
198 199 2.197577 GCGGTGCTCATAGAGTTTCTC 58.802 52.381 0.00 0.00 31.39 2.87
199 200 1.469940 CGCGGTGCTCATAGAGTTTCT 60.470 52.381 0.00 0.00 31.39 2.52
200 201 0.924090 CGCGGTGCTCATAGAGTTTC 59.076 55.000 0.00 0.00 31.39 2.78
201 202 1.084370 GCGCGGTGCTCATAGAGTTT 61.084 55.000 8.83 0.00 41.73 2.66
202 203 1.519455 GCGCGGTGCTCATAGAGTT 60.519 57.895 8.83 0.00 41.73 3.01
203 204 2.105128 GCGCGGTGCTCATAGAGT 59.895 61.111 8.83 0.00 41.73 3.24
204 205 3.026879 CGCGCGGTGCTCATAGAG 61.027 66.667 24.84 0.00 43.27 2.43
205 206 3.751401 GACGCGCGGTGCTCATAGA 62.751 63.158 35.22 0.00 43.27 1.98
206 207 3.323136 GACGCGCGGTGCTCATAG 61.323 66.667 35.22 1.83 43.27 2.23
207 208 4.865761 GGACGCGCGGTGCTCATA 62.866 66.667 35.22 0.00 43.27 2.15
225 226 4.461784 GAGTTCGAGTCTCGGCAC 57.538 61.111 21.63 17.49 40.88 5.01
230 231 0.959372 TCCACCCGAGTTCGAGTCTC 60.959 60.000 2.59 8.89 43.02 3.36
231 232 1.074423 TCCACCCGAGTTCGAGTCT 59.926 57.895 2.59 0.00 43.02 3.24
232 233 1.212229 GTCCACCCGAGTTCGAGTC 59.788 63.158 2.59 0.00 43.02 3.36
233 234 1.228490 AGTCCACCCGAGTTCGAGT 60.228 57.895 2.59 0.00 43.02 4.18
234 235 1.213013 CAGTCCACCCGAGTTCGAG 59.787 63.158 2.59 0.00 43.02 4.04
235 236 2.273179 CCAGTCCACCCGAGTTCGA 61.273 63.158 2.59 0.00 43.02 3.71
236 237 2.261671 CCAGTCCACCCGAGTTCG 59.738 66.667 0.00 0.00 39.44 3.95
237 238 2.047179 GCCAGTCCACCCGAGTTC 60.047 66.667 0.00 0.00 0.00 3.01
238 239 2.847234 TGCCAGTCCACCCGAGTT 60.847 61.111 0.00 0.00 0.00 3.01
239 240 3.314331 CTGCCAGTCCACCCGAGT 61.314 66.667 0.00 0.00 0.00 4.18
240 241 4.767255 GCTGCCAGTCCACCCGAG 62.767 72.222 0.00 0.00 0.00 4.63
242 243 4.641645 TTGCTGCCAGTCCACCCG 62.642 66.667 0.00 0.00 0.00 5.28
243 244 2.985847 GTTGCTGCCAGTCCACCC 60.986 66.667 0.00 0.00 0.00 4.61
244 245 2.985847 GGTTGCTGCCAGTCCACC 60.986 66.667 0.00 0.00 0.00 4.61
245 246 1.968540 GAGGTTGCTGCCAGTCCAC 60.969 63.158 0.00 0.00 0.00 4.02
246 247 2.401699 CTGAGGTTGCTGCCAGTCCA 62.402 60.000 0.00 0.00 0.00 4.02
247 248 1.673665 CTGAGGTTGCTGCCAGTCC 60.674 63.158 0.00 0.00 0.00 3.85
248 249 2.331132 GCTGAGGTTGCTGCCAGTC 61.331 63.158 0.00 0.00 0.00 3.51
249 250 2.282040 GCTGAGGTTGCTGCCAGT 60.282 61.111 0.00 0.00 0.00 4.00
250 251 2.033757 AGCTGAGGTTGCTGCCAG 59.966 61.111 0.00 0.00 39.56 4.85
255 256 1.601171 CTAGGCAGCTGAGGTTGCT 59.399 57.895 20.43 0.00 46.51 3.91
256 257 2.111582 GCTAGGCAGCTGAGGTTGC 61.112 63.158 20.43 10.49 46.58 4.17
257 258 4.215349 GCTAGGCAGCTGAGGTTG 57.785 61.111 20.43 3.83 44.93 3.77
266 267 2.125106 GACCCGTTGGCTAGGCAG 60.125 66.667 19.32 10.25 33.59 4.85
267 268 4.077184 CGACCCGTTGGCTAGGCA 62.077 66.667 16.16 16.16 33.59 4.75
268 269 3.766691 TCGACCCGTTGGCTAGGC 61.767 66.667 9.85 9.85 33.59 3.93
269 270 2.183555 GTCGACCCGTTGGCTAGG 59.816 66.667 3.51 0.00 33.59 3.02
270 271 2.202570 CGTCGACCCGTTGGCTAG 60.203 66.667 10.58 0.00 33.59 3.42
271 272 4.424566 GCGTCGACCCGTTGGCTA 62.425 66.667 10.58 0.00 33.59 3.93
285 286 4.003788 CTTGTGAGGACGGGGCGT 62.004 66.667 0.00 0.00 45.10 5.68
286 287 3.234630 TTCTTGTGAGGACGGGGCG 62.235 63.158 0.00 0.00 0.00 6.13
287 288 1.376037 CTTCTTGTGAGGACGGGGC 60.376 63.158 0.00 0.00 0.00 5.80
288 289 1.376037 GCTTCTTGTGAGGACGGGG 60.376 63.158 0.00 0.00 0.00 5.73
289 290 0.036010 ATGCTTCTTGTGAGGACGGG 60.036 55.000 0.00 0.00 0.00 5.28
290 291 1.081892 CATGCTTCTTGTGAGGACGG 58.918 55.000 0.00 0.00 0.00 4.79
291 292 2.084610 TCATGCTTCTTGTGAGGACG 57.915 50.000 0.00 0.00 0.00 4.79
292 293 5.159209 CAAAATCATGCTTCTTGTGAGGAC 58.841 41.667 0.00 0.00 0.00 3.85
293 294 4.321452 GCAAAATCATGCTTCTTGTGAGGA 60.321 41.667 0.00 0.00 43.06 3.71
294 295 3.924686 GCAAAATCATGCTTCTTGTGAGG 59.075 43.478 0.00 0.00 43.06 3.86
305 306 2.945278 TCCGTGAAAGCAAAATCATGC 58.055 42.857 0.00 0.00 46.78 4.06
306 307 3.922240 CCTTCCGTGAAAGCAAAATCATG 59.078 43.478 0.00 0.00 33.34 3.07
307 308 3.614870 GCCTTCCGTGAAAGCAAAATCAT 60.615 43.478 3.31 0.00 30.29 2.45
308 309 2.288152 GCCTTCCGTGAAAGCAAAATCA 60.288 45.455 3.31 0.00 30.29 2.57
309 310 2.288152 TGCCTTCCGTGAAAGCAAAATC 60.288 45.455 7.26 0.00 36.27 2.17
310 311 1.686052 TGCCTTCCGTGAAAGCAAAAT 59.314 42.857 7.26 0.00 36.27 1.82
311 312 1.107114 TGCCTTCCGTGAAAGCAAAA 58.893 45.000 7.26 0.00 36.27 2.44
312 313 1.000385 CATGCCTTCCGTGAAAGCAAA 60.000 47.619 12.04 0.00 41.39 3.68
313 314 0.597568 CATGCCTTCCGTGAAAGCAA 59.402 50.000 12.04 0.46 41.39 3.91
314 315 1.243342 CCATGCCTTCCGTGAAAGCA 61.243 55.000 10.87 10.87 42.10 3.91
315 316 1.244019 ACCATGCCTTCCGTGAAAGC 61.244 55.000 0.00 1.62 31.89 3.51
316 317 1.068333 CAACCATGCCTTCCGTGAAAG 60.068 52.381 0.00 0.00 31.89 2.62
317 318 0.958091 CAACCATGCCTTCCGTGAAA 59.042 50.000 0.00 0.00 31.89 2.69
318 319 0.179004 ACAACCATGCCTTCCGTGAA 60.179 50.000 0.00 0.00 31.89 3.18
319 320 0.888736 CACAACCATGCCTTCCGTGA 60.889 55.000 0.00 0.00 31.89 4.35
320 321 1.172180 ACACAACCATGCCTTCCGTG 61.172 55.000 0.00 0.00 0.00 4.94
321 322 1.150536 ACACAACCATGCCTTCCGT 59.849 52.632 0.00 0.00 0.00 4.69
380 382 0.034059 ATTATGCCTCTCGCGGAAGG 59.966 55.000 19.53 19.53 42.08 3.46
384 386 1.597937 GCAAAATTATGCCTCTCGCGG 60.598 52.381 6.13 0.00 42.08 6.46
418 420 0.179094 TCTCGTGAAAGCACAACCGT 60.179 50.000 0.00 0.00 45.41 4.83
434 436 0.386113 GAGGCATGGTCGTACCTCTC 59.614 60.000 7.37 4.56 44.41 3.20
440 442 1.179152 TCGAAAGAGGCATGGTCGTA 58.821 50.000 0.00 0.00 34.84 3.43
444 446 3.077359 CTCTTTTCGAAAGAGGCATGGT 58.923 45.455 20.53 0.00 43.69 3.55
447 449 6.391227 TTTTTCTCTTTTCGAAAGAGGCAT 57.609 33.333 24.43 0.00 42.97 4.40
474 476 3.305608 GGAAAAACTGAACAGGGAGCATG 60.306 47.826 6.76 0.00 0.00 4.06
475 477 2.893489 GGAAAAACTGAACAGGGAGCAT 59.107 45.455 6.76 0.00 0.00 3.79
524 540 5.593909 AGATCACATGTTGACAGGTTTTGAA 59.406 36.000 0.00 0.00 39.00 2.69
526 542 5.443185 AGATCACATGTTGACAGGTTTTG 57.557 39.130 0.00 0.00 39.00 2.44
543 559 6.691818 GCGTCGAGATCTTTAAAACTAGATCA 59.308 38.462 14.42 0.00 45.90 2.92
555 571 3.062234 GGATTTTTCGCGTCGAGATCTTT 59.938 43.478 5.77 0.00 37.14 2.52
571 587 8.894768 TTGAACCGTTTTCATTATTGGATTTT 57.105 26.923 0.00 0.00 0.00 1.82
572 588 8.364142 TCTTGAACCGTTTTCATTATTGGATTT 58.636 29.630 0.00 0.00 0.00 2.17
581 597 4.749598 GCCAAATCTTGAACCGTTTTCATT 59.250 37.500 0.00 0.00 0.00 2.57
589 605 0.958091 TGTGGCCAAATCTTGAACCG 59.042 50.000 7.24 0.00 31.63 4.44
591 607 1.606668 TCGTGTGGCCAAATCTTGAAC 59.393 47.619 7.24 0.00 0.00 3.18
604 620 9.840427 AAACATTTTATCTCTTAAATCGTGTGG 57.160 29.630 0.00 0.00 30.03 4.17
655 674 1.944024 TGTCGCGACATGGAAGTTTTT 59.056 42.857 36.40 0.00 36.21 1.94
662 681 0.246360 ATCACTTGTCGCGACATGGA 59.754 50.000 40.50 34.75 41.52 3.41
669 688 3.087273 ATGCGCATCACTTGTCGCG 62.087 57.895 19.28 0.00 46.67 5.87
670 689 1.581912 CATGCGCATCACTTGTCGC 60.582 57.895 22.51 0.00 45.13 5.19
694 713 1.817520 CAGGTTGCCACACGTGACA 60.818 57.895 25.01 14.31 35.01 3.58
699 718 1.021202 TCTTTTCAGGTTGCCACACG 58.979 50.000 0.00 0.00 0.00 4.49
700 719 2.288395 CCATCTTTTCAGGTTGCCACAC 60.288 50.000 0.00 0.00 0.00 3.82
704 723 1.821136 CTCCCATCTTTTCAGGTTGCC 59.179 52.381 0.00 0.00 0.00 4.52
714 733 3.634397 TCAAAGATCGCTCCCATCTTT 57.366 42.857 3.82 3.82 46.88 2.52
715 734 3.634397 TTCAAAGATCGCTCCCATCTT 57.366 42.857 0.00 0.00 41.50 2.40
716 735 3.198635 TCTTTCAAAGATCGCTCCCATCT 59.801 43.478 0.00 0.00 31.20 2.90
717 736 3.535561 TCTTTCAAAGATCGCTCCCATC 58.464 45.455 0.00 0.00 31.20 3.51
721 740 5.172205 AGTACTTCTTTCAAAGATCGCTCC 58.828 41.667 0.00 0.00 37.38 4.70
725 744 6.692232 AACGAGTACTTCTTTCAAAGATCG 57.308 37.500 15.39 15.39 37.38 3.69
768 787 4.372656 CCTCGTTTTGTTCTTGTCTCTCT 58.627 43.478 0.00 0.00 0.00 3.10
769 788 3.059529 GCCTCGTTTTGTTCTTGTCTCTC 60.060 47.826 0.00 0.00 0.00 3.20
770 789 2.872858 GCCTCGTTTTGTTCTTGTCTCT 59.127 45.455 0.00 0.00 0.00 3.10
869 919 1.250328 TTGTTTCTAGTCGGCTCGGA 58.750 50.000 0.00 0.00 0.00 4.55
1080 1132 0.179001 TCCTCATGGCCTCGTCGATA 60.179 55.000 3.32 0.00 0.00 2.92
1185 1246 2.126307 CGTCGTCCCTGTGAGCAG 60.126 66.667 0.00 0.00 42.22 4.24
1190 1251 3.991051 ACTGCCGTCGTCCCTGTG 61.991 66.667 0.00 0.00 0.00 3.66
1191 1252 3.991051 CACTGCCGTCGTCCCTGT 61.991 66.667 0.00 0.00 0.00 4.00
1225 1286 1.332195 CCTCCATCTCGCCATAGTCA 58.668 55.000 0.00 0.00 0.00 3.41
1255 1316 3.695357 TCCTCATTCTCCTCCTCATCA 57.305 47.619 0.00 0.00 0.00 3.07
1258 1319 3.303938 GACATCCTCATTCTCCTCCTCA 58.696 50.000 0.00 0.00 0.00 3.86
1267 1328 0.533755 CCTGGGCGACATCCTCATTC 60.534 60.000 0.00 0.00 0.00 2.67
1334 1395 3.771160 ATGGGAGACACCGCCGAC 61.771 66.667 0.00 0.00 40.11 4.79
1335 1396 3.770040 CATGGGAGACACCGCCGA 61.770 66.667 0.00 0.00 40.11 5.54
1336 1397 4.838152 CCATGGGAGACACCGCCG 62.838 72.222 2.85 0.00 40.11 6.46
1337 1398 4.489771 CCCATGGGAGACACCGCC 62.490 72.222 28.27 0.00 40.11 6.13
1339 1400 2.971598 AAGCCCATGGGAGACACCG 61.972 63.158 36.00 5.38 40.11 4.94
1340 1401 1.379044 CAAGCCCATGGGAGACACC 60.379 63.158 36.00 15.50 37.50 4.16
1357 1418 4.894719 TCCATGTGGAGCTCCTCA 57.105 55.556 33.31 33.31 42.82 3.86
1367 1428 1.092348 TCGTCGTAGTCCTCCATGTG 58.908 55.000 0.00 0.00 0.00 3.21
1378 1439 0.043224 CGTCATCCTCGTCGTCGTAG 60.043 60.000 1.33 0.00 38.33 3.51
1433 1494 1.002033 GACATGATCGAATTGGCAGCC 60.002 52.381 3.66 3.66 0.00 4.85
1439 1500 6.019762 CACAAGACAAGACATGATCGAATTG 58.980 40.000 0.00 0.00 0.00 2.32
1450 1511 1.339535 TGCCACACACAAGACAAGACA 60.340 47.619 0.00 0.00 0.00 3.41
1466 1527 1.974875 CAAGCATCAGCCAGTGCCA 60.975 57.895 1.67 0.00 42.20 4.92
1467 1528 1.246056 TTCAAGCATCAGCCAGTGCC 61.246 55.000 1.67 0.00 42.20 5.01
1468 1529 0.109412 GTTCAAGCATCAGCCAGTGC 60.109 55.000 0.00 0.00 43.56 4.40
1469 1530 1.199327 CAGTTCAAGCATCAGCCAGTG 59.801 52.381 0.00 0.00 43.56 3.66
1471 1532 0.170561 GCAGTTCAAGCATCAGCCAG 59.829 55.000 0.00 0.00 43.56 4.85
1595 1656 5.557893 GCAAGAGAAATCATACTCACATCGC 60.558 44.000 0.00 0.00 35.83 4.58
1621 1682 4.696479 AAGAGCAATACATCTCCGGAAT 57.304 40.909 5.23 0.00 0.00 3.01
1623 1684 4.487714 AAAAGAGCAATACATCTCCGGA 57.512 40.909 2.93 2.93 0.00 5.14
1661 1726 6.682423 TTCACCTACAATGTAATGCTGATG 57.318 37.500 0.00 0.00 0.00 3.07
1670 1736 4.513442 GTGGCTCATTCACCTACAATGTA 58.487 43.478 0.00 0.00 33.61 2.29
1691 1757 6.814954 TCATCCTAATAAAGCAGAGAAGGT 57.185 37.500 0.00 0.00 0.00 3.50
1727 1795 2.420722 GTCTTCAATCTCCTCGTCGTCT 59.579 50.000 0.00 0.00 0.00 4.18
1805 1873 3.641436 TGACACTTGCCTGAAGAGAGTTA 59.359 43.478 0.00 0.00 35.42 2.24
1808 1876 2.827800 TGACACTTGCCTGAAGAGAG 57.172 50.000 0.00 0.00 35.42 3.20
1833 1901 5.068198 AGCAAATGCAGAGAAAAAGAGTTGA 59.932 36.000 8.28 0.00 45.16 3.18
1866 1934 4.060038 TCAGAGAAAAAGAACGACAGCT 57.940 40.909 0.00 0.00 0.00 4.24
1882 1951 6.773976 ACTAGAAGACTTCCAGAATCAGAG 57.226 41.667 16.30 2.21 0.00 3.35
1903 1972 1.880027 CCGCTTTGCCTTCTTGTTACT 59.120 47.619 0.00 0.00 0.00 2.24
1904 1973 1.877443 TCCGCTTTGCCTTCTTGTTAC 59.123 47.619 0.00 0.00 0.00 2.50
1914 1983 3.367630 CACATAAATGTTTCCGCTTTGCC 59.632 43.478 0.00 0.00 39.39 4.52
1921 1990 4.637483 ATGCTCCACATAAATGTTTCCG 57.363 40.909 0.00 0.00 39.39 4.30
1928 1997 8.199449 CCAACAAGAATAATGCTCCACATAAAT 58.801 33.333 0.00 0.00 38.34 1.40
1949 2018 9.383519 GAGAATACAAATCTATTCAGTCCAACA 57.616 33.333 0.00 0.00 36.10 3.33
1992 2061 4.641396 TGCACAGTAAACAATACTCTGCT 58.359 39.130 14.14 0.00 39.26 4.24
1994 2063 7.595311 TGTATGCACAGTAAACAATACTCTG 57.405 36.000 0.00 0.00 0.00 3.35
2012 2081 6.554419 TGTGAAATAAGCACATTCTGTATGC 58.446 36.000 0.00 0.00 41.00 3.14
2364 2468 5.404946 CAACAGCAATGAAATTCCCTGTAG 58.595 41.667 6.27 0.00 41.99 2.74
2443 2554 8.278408 TCGTATGAAGTAATAGTGTCGTATGTC 58.722 37.037 0.00 0.00 0.00 3.06
2452 2563 7.426410 ACTCATGGTCGTATGAAGTAATAGTG 58.574 38.462 0.00 0.00 36.69 2.74
2583 2696 4.567958 CCTTCTCCCCCTTAACCTTTTCTC 60.568 50.000 0.00 0.00 0.00 2.87
2649 3309 8.650143 AATGTAGCTAGGATTTCAAGGAAAAA 57.350 30.769 0.00 0.00 35.11 1.94
2650 3310 9.920946 ATAATGTAGCTAGGATTTCAAGGAAAA 57.079 29.630 0.00 0.00 35.11 2.29
2682 3342 1.679641 CCCTGCACATGACATGCCA 60.680 57.895 15.49 11.49 42.69 4.92
2683 3343 0.966875 TTCCCTGCACATGACATGCC 60.967 55.000 15.49 7.46 42.69 4.40
2706 3366 3.408157 TGTGGCTACCCTCCTTGTATA 57.592 47.619 0.00 0.00 0.00 1.47
2727 3387 2.213499 CAAGTCCGAGCACAGAACTTT 58.787 47.619 0.00 0.00 0.00 2.66
2758 3418 0.599204 CGTAAACGCACCTCACCACT 60.599 55.000 0.00 0.00 0.00 4.00
2776 3436 2.286772 GGCAACCACTCAAGTTGTAACG 60.287 50.000 2.11 0.00 45.14 3.18
2780 3440 1.680338 GAGGCAACCACTCAAGTTGT 58.320 50.000 2.11 0.00 45.14 3.32
2797 3457 3.199880 AGTGAACAGACAACAAGGGAG 57.800 47.619 0.00 0.00 0.00 4.30
2800 3460 5.530915 TCCAATAAGTGAACAGACAACAAGG 59.469 40.000 0.00 0.00 0.00 3.61
2805 3465 4.394729 GGGTCCAATAAGTGAACAGACAA 58.605 43.478 0.00 0.00 0.00 3.18
2953 3613 9.582431 AAGTCAATAAGAAGAATGCAATCATTG 57.418 29.630 4.25 5.15 42.60 2.82
2972 3635 8.637196 TCGGACTGATATATACAGAAGTCAAT 57.363 34.615 15.02 0.00 36.59 2.57
3154 3821 1.900245 TGAGCAGCAGCAGAAATTCA 58.100 45.000 3.17 0.00 45.49 2.57
3155 3822 2.422479 TCATGAGCAGCAGCAGAAATTC 59.578 45.455 3.17 0.00 45.49 2.17
3204 3887 6.519679 AATTGCTGACATGCTAGAAATCAA 57.480 33.333 0.00 0.00 0.00 2.57
3259 3942 1.992557 ACATTACTGGGTGGTGTCCAT 59.007 47.619 0.00 0.00 35.28 3.41
3328 4011 8.390921 AGGAACCAAAATCAGAAGGTAATAAGA 58.609 33.333 0.00 0.00 33.15 2.10
3329 4012 8.462016 CAGGAACCAAAATCAGAAGGTAATAAG 58.538 37.037 0.00 0.00 33.15 1.73
3331 4014 6.889722 CCAGGAACCAAAATCAGAAGGTAATA 59.110 38.462 0.00 0.00 33.15 0.98
3332 4015 5.716703 CCAGGAACCAAAATCAGAAGGTAAT 59.283 40.000 0.00 0.00 33.15 1.89
3353 4115 1.815003 GGCTGTCAAGACAAATCCCAG 59.185 52.381 4.29 0.00 41.33 4.45
3461 4227 9.069078 CATTTCAAAATATCTGCAGTAACACAG 57.931 33.333 14.67 0.97 35.15 3.66
3484 4250 7.328277 TGTAAAGTTAACACTGAACTGCATT 57.672 32.000 8.61 0.00 37.22 3.56
3621 4732 6.103997 TCTACGGACCATTTATGACAACTTC 58.896 40.000 0.00 0.00 0.00 3.01
3643 4754 2.758736 AGCTTTCGACATCTGCTTCT 57.241 45.000 0.00 0.00 0.00 2.85
3816 4972 6.149973 TCTCATAACAAAAAGCATGGACTCTG 59.850 38.462 0.00 0.00 0.00 3.35
3833 4989 7.141363 ACTCAAAACATGTTGCTTCTCATAAC 58.859 34.615 12.82 0.00 0.00 1.89
3838 4994 5.470098 TCCTACTCAAAACATGTTGCTTCTC 59.530 40.000 12.82 0.00 0.00 2.87
3839 4995 5.376625 TCCTACTCAAAACATGTTGCTTCT 58.623 37.500 12.82 0.00 0.00 2.85
3865 5021 6.148150 GTCGAGTCTATAGTCCATTAGTCCTG 59.852 46.154 0.00 0.00 0.00 3.86
3895 5051 6.093495 TGGAAATGGTTTGAACTCGCTTATAG 59.907 38.462 0.00 0.00 0.00 1.31
3938 5094 2.366916 TGCATGGAACCGGAAATTTTGT 59.633 40.909 9.46 0.00 0.00 2.83
3947 5105 0.947244 GAATAGCTGCATGGAACCGG 59.053 55.000 0.00 0.00 0.00 5.28
4011 5205 8.224720 ACCCAGTTGCCACATTACTATTATATT 58.775 33.333 0.00 0.00 0.00 1.28
4167 5368 1.011545 ACATTGGGGGTAGATGGGGTA 59.988 52.381 0.00 0.00 0.00 3.69
4227 5435 0.732571 ATTCGGTTTATGTGGCTGCG 59.267 50.000 0.00 0.00 0.00 5.18
4372 5584 4.683320 CACCTGCGTTCAGAGATATGTATG 59.317 45.833 0.00 0.00 42.95 2.39
4373 5585 4.262207 CCACCTGCGTTCAGAGATATGTAT 60.262 45.833 0.00 0.00 42.95 2.29
4396 5608 1.107114 TTCGACAGATCCCAGAGCTC 58.893 55.000 5.27 5.27 0.00 4.09
4534 5783 4.263506 CGAAAATATAGCCCCCTGGAGATT 60.264 45.833 0.00 0.00 0.00 2.40
4545 5797 6.144402 TCGAAAACGATACCGAAAATATAGCC 59.856 38.462 0.00 0.00 39.50 3.93
4639 5891 4.157849 TCGACAGACAGACAGAGGATAT 57.842 45.455 0.00 0.00 0.00 1.63
4646 5898 2.797156 CAAACCTTCGACAGACAGACAG 59.203 50.000 0.00 0.00 0.00 3.51
4647 5899 2.167693 ACAAACCTTCGACAGACAGACA 59.832 45.455 0.00 0.00 0.00 3.41
4657 5909 1.270094 ACATGAGCGACAAACCTTCGA 60.270 47.619 0.00 0.00 38.85 3.71
4658 5910 1.126846 GACATGAGCGACAAACCTTCG 59.873 52.381 0.00 0.00 39.56 3.79
4659 5911 1.464997 GGACATGAGCGACAAACCTTC 59.535 52.381 0.00 0.00 0.00 3.46
4660 5912 1.202758 TGGACATGAGCGACAAACCTT 60.203 47.619 0.00 0.00 0.00 3.50
4661 5913 0.396435 TGGACATGAGCGACAAACCT 59.604 50.000 0.00 0.00 0.00 3.50
4662 5914 1.131126 CATGGACATGAGCGACAAACC 59.869 52.381 6.44 0.00 41.20 3.27
4665 5917 3.118811 TCATACATGGACATGAGCGACAA 60.119 43.478 18.38 0.00 41.20 3.18
4667 5919 2.797156 GTCATACATGGACATGAGCGAC 59.203 50.000 18.38 15.04 41.20 5.19
4669 5921 3.055591 GAGTCATACATGGACATGAGCG 58.944 50.000 18.38 6.34 41.20 5.03
4670 5922 4.333913 AGAGTCATACATGGACATGAGC 57.666 45.455 18.38 4.37 41.20 4.26
4671 5923 5.295950 GGAAGAGTCATACATGGACATGAG 58.704 45.833 18.38 8.19 41.20 2.90
4673 5925 4.141642 TGGGAAGAGTCATACATGGACATG 60.142 45.833 10.57 10.57 44.15 3.21
4674 5926 4.040047 TGGGAAGAGTCATACATGGACAT 58.960 43.478 0.00 0.00 37.74 3.06
4676 5928 4.696479 ATGGGAAGAGTCATACATGGAC 57.304 45.455 0.00 0.00 35.50 4.02
4677 5929 4.721274 TGAATGGGAAGAGTCATACATGGA 59.279 41.667 0.00 0.00 0.00 3.41
4678 5930 4.818546 GTGAATGGGAAGAGTCATACATGG 59.181 45.833 0.00 0.00 0.00 3.66
4679 5931 5.295292 GTGTGAATGGGAAGAGTCATACATG 59.705 44.000 0.00 0.00 33.71 3.21
4680 5932 5.045651 TGTGTGAATGGGAAGAGTCATACAT 60.046 40.000 0.00 0.00 37.21 2.29
4681 5933 4.285775 TGTGTGAATGGGAAGAGTCATACA 59.714 41.667 0.00 0.00 38.98 2.29
4682 5934 4.832248 TGTGTGAATGGGAAGAGTCATAC 58.168 43.478 0.00 0.00 34.00 2.39
4683 5935 5.497464 TTGTGTGAATGGGAAGAGTCATA 57.503 39.130 0.00 0.00 0.00 2.15
4684 5936 4.371624 TTGTGTGAATGGGAAGAGTCAT 57.628 40.909 0.00 0.00 0.00 3.06
4685 5937 3.855255 TTGTGTGAATGGGAAGAGTCA 57.145 42.857 0.00 0.00 0.00 3.41
4686 5938 4.154918 GTGATTGTGTGAATGGGAAGAGTC 59.845 45.833 0.00 0.00 0.00 3.36
4687 5939 4.074970 GTGATTGTGTGAATGGGAAGAGT 58.925 43.478 0.00 0.00 0.00 3.24
4688 5940 4.155462 CAGTGATTGTGTGAATGGGAAGAG 59.845 45.833 0.00 0.00 0.00 2.85
4689 5941 4.074259 CAGTGATTGTGTGAATGGGAAGA 58.926 43.478 0.00 0.00 0.00 2.87
4690 5942 3.822735 ACAGTGATTGTGTGAATGGGAAG 59.177 43.478 0.00 0.00 38.99 3.46
4691 5943 3.831323 ACAGTGATTGTGTGAATGGGAA 58.169 40.909 0.00 0.00 38.99 3.97
4692 5944 3.507162 ACAGTGATTGTGTGAATGGGA 57.493 42.857 0.00 0.00 38.99 4.37
4822 6075 0.534873 GTGCCTCTCTGGAAGGAGTC 59.465 60.000 0.00 0.00 38.35 3.36
4823 6076 0.178921 TGTGCCTCTCTGGAAGGAGT 60.179 55.000 0.00 0.00 38.35 3.85
4828 6081 1.203112 AGTCTCTGTGCCTCTCTGGAA 60.203 52.381 0.00 0.00 38.35 3.53
4853 6106 1.406341 CCATACTACAACCGTGGTGGG 60.406 57.143 0.00 0.00 44.64 4.61
4869 6122 6.069673 ACAGATCCATTTTGTCACTACCCATA 60.070 38.462 0.00 0.00 0.00 2.74
4873 6126 6.313905 CACTACAGATCCATTTTGTCACTACC 59.686 42.308 0.00 0.00 0.00 3.18
4877 6154 6.820656 AGATCACTACAGATCCATTTTGTCAC 59.179 38.462 0.00 0.00 44.32 3.67
4878 6155 6.820152 CAGATCACTACAGATCCATTTTGTCA 59.180 38.462 0.00 0.00 44.32 3.58
4901 6180 0.737715 GTTCCAGACCTGCGCTACAG 60.738 60.000 9.73 0.00 46.77 2.74
4905 6184 2.210013 TGAGTTCCAGACCTGCGCT 61.210 57.895 9.73 0.00 0.00 5.92
4907 6186 0.946221 GTGTGAGTTCCAGACCTGCG 60.946 60.000 0.00 0.00 33.32 5.18
4908 6187 0.394565 AGTGTGAGTTCCAGACCTGC 59.605 55.000 0.00 0.00 39.66 4.85
4910 6189 2.088104 TGAGTGTGAGTTCCAGACCT 57.912 50.000 0.00 0.00 39.66 3.85
4911 6190 2.103263 ACTTGAGTGTGAGTTCCAGACC 59.897 50.000 0.00 0.00 39.66 3.85
4913 6192 4.215908 ACTACTTGAGTGTGAGTTCCAGA 58.784 43.478 0.00 0.00 36.87 3.86
4914 6193 4.592485 ACTACTTGAGTGTGAGTTCCAG 57.408 45.455 0.00 0.00 36.87 3.86
4915 6194 6.665992 AATACTACTTGAGTGTGAGTTCCA 57.334 37.500 0.00 0.00 39.39 3.53
4916 6195 7.964604 AAAATACTACTTGAGTGTGAGTTCC 57.035 36.000 0.00 0.00 39.39 3.62
4917 6196 9.909644 TCTAAAATACTACTTGAGTGTGAGTTC 57.090 33.333 0.00 0.00 39.39 3.01
4918 6197 9.694137 GTCTAAAATACTACTTGAGTGTGAGTT 57.306 33.333 0.00 0.00 39.39 3.01
4920 6199 7.760340 GGGTCTAAAATACTACTTGAGTGTGAG 59.240 40.741 0.00 0.00 39.39 3.51
4921 6200 7.310237 GGGGTCTAAAATACTACTTGAGTGTGA 60.310 40.741 0.00 0.00 39.39 3.58
4922 6201 6.817140 GGGGTCTAAAATACTACTTGAGTGTG 59.183 42.308 0.00 0.00 39.39 3.82
4923 6202 6.350780 CGGGGTCTAAAATACTACTTGAGTGT 60.351 42.308 0.00 0.00 39.39 3.55
4924 6203 6.040878 CGGGGTCTAAAATACTACTTGAGTG 58.959 44.000 0.00 0.00 39.39 3.51
4925 6204 5.718607 ACGGGGTCTAAAATACTACTTGAGT 59.281 40.000 0.00 0.00 42.69 3.41
4926 6205 6.040878 CACGGGGTCTAAAATACTACTTGAG 58.959 44.000 0.00 0.00 0.00 3.02
4927 6206 5.481473 ACACGGGGTCTAAAATACTACTTGA 59.519 40.000 0.00 0.00 0.00 3.02
4928 6207 5.727434 ACACGGGGTCTAAAATACTACTTG 58.273 41.667 0.00 0.00 0.00 3.16
4929 6208 6.168389 CAACACGGGGTCTAAAATACTACTT 58.832 40.000 0.00 0.00 0.00 2.24
4955 9478 1.548719 TGTATGTCGAGGTCCAACCAG 59.451 52.381 0.00 0.00 41.95 4.00
4959 9482 2.803956 ACTCTGTATGTCGAGGTCCAA 58.196 47.619 0.00 0.00 0.00 3.53
4960 9483 2.509166 ACTCTGTATGTCGAGGTCCA 57.491 50.000 0.00 0.00 0.00 4.02
4961 9484 3.276857 TGTACTCTGTATGTCGAGGTCC 58.723 50.000 0.00 0.00 0.00 4.46
4962 9485 4.155462 TGTTGTACTCTGTATGTCGAGGTC 59.845 45.833 0.00 0.00 0.00 3.85
4984 9509 1.093972 TGGATTGGCAACGCTATGTG 58.906 50.000 0.00 0.00 42.51 3.21
4988 9513 1.295357 CGTGTGGATTGGCAACGCTA 61.295 55.000 0.00 0.00 42.51 4.26
5061 9587 3.003378 CCAGTGCTGATAATGCATGTCTG 59.997 47.826 0.00 7.37 42.69 3.51
5064 9590 3.286329 TCCAGTGCTGATAATGCATGT 57.714 42.857 0.00 0.00 42.69 3.21
5095 9622 4.165372 AGTGGAGTCCAGTTTTCTAACCAA 59.835 41.667 13.61 0.00 32.53 3.67
5130 9657 1.825474 CTGTACGAACCACAGGAGGAT 59.175 52.381 0.00 0.00 39.80 3.24
5169 9698 2.353030 CATCGCGTGCATGCATGG 60.353 61.111 34.64 25.52 33.81 3.66
5227 9756 4.333926 CCCGAAAAGAGACTGGATCATTTC 59.666 45.833 0.00 0.00 0.00 2.17
5329 9859 2.808919 TGTTTTCTGGAACACCCACAA 58.191 42.857 0.00 0.00 40.82 3.33
5373 9903 2.696187 TCAAAACCCCCTTTCTTTTCCG 59.304 45.455 0.00 0.00 0.00 4.30
5387 9917 5.070446 ACCCTTTCCTTCTTCATTCAAAACC 59.930 40.000 0.00 0.00 0.00 3.27
5404 9934 5.080969 TGTACTGCACACTATACCCTTTC 57.919 43.478 0.00 0.00 30.04 2.62
5455 9990 4.881440 TGCAGCCATCCATCGCCC 62.881 66.667 0.00 0.00 0.00 6.13
5562 10097 9.952030 TTTAGATACATGGTTTATCACAAGTGA 57.048 29.630 5.24 5.24 44.59 3.41
5607 10142 2.358267 GAGGTACGTGATACTCCCACTG 59.642 54.545 0.00 0.00 33.87 3.66
5610 10145 1.285667 TGGAGGTACGTGATACTCCCA 59.714 52.381 19.90 10.31 34.81 4.37
5613 10148 4.135306 TGAGATGGAGGTACGTGATACTC 58.865 47.826 0.00 0.00 33.87 2.59
5614 10149 4.166246 TGAGATGGAGGTACGTGATACT 57.834 45.455 0.00 0.00 33.87 2.12
5615 10150 4.913335 TTGAGATGGAGGTACGTGATAC 57.087 45.455 0.00 0.00 0.00 2.24
5616 10151 7.776618 ATTATTGAGATGGAGGTACGTGATA 57.223 36.000 0.00 0.00 0.00 2.15
5617 10152 6.672266 ATTATTGAGATGGAGGTACGTGAT 57.328 37.500 0.00 0.00 0.00 3.06
5618 10153 7.232737 ACATATTATTGAGATGGAGGTACGTGA 59.767 37.037 0.00 0.00 0.00 4.35
5619 10154 7.329471 CACATATTATTGAGATGGAGGTACGTG 59.671 40.741 0.00 0.00 0.00 4.49
5621 10156 7.329471 CACACATATTATTGAGATGGAGGTACG 59.671 40.741 0.00 0.00 0.00 3.67
5625 10160 8.859236 AATCACACATATTATTGAGATGGAGG 57.141 34.615 0.00 0.00 0.00 4.30
5637 10172 8.670135 CGGTCTTGGTTTAAATCACACATATTA 58.330 33.333 0.00 0.00 0.00 0.98
5642 10177 3.003897 GCGGTCTTGGTTTAAATCACACA 59.996 43.478 0.00 0.00 0.00 3.72
5649 10185 1.598601 GTGTCGCGGTCTTGGTTTAAA 59.401 47.619 6.13 0.00 0.00 1.52
5652 10188 0.463116 AAGTGTCGCGGTCTTGGTTT 60.463 50.000 6.13 0.00 0.00 3.27
5660 10196 3.181524 CGATTCAAAATAAGTGTCGCGGT 60.182 43.478 6.13 0.00 0.00 5.68
5662 10198 3.061563 TCCGATTCAAAATAAGTGTCGCG 59.938 43.478 0.00 0.00 0.00 5.87
5678 10214 7.611079 AGTTAAACACTAGTACTCTCTCCGATT 59.389 37.037 0.00 0.00 31.97 3.34
5681 10217 6.740411 AGTTAAACACTAGTACTCTCTCCG 57.260 41.667 0.00 0.00 31.97 4.63
5682 10218 8.022550 GTCAAGTTAAACACTAGTACTCTCTCC 58.977 40.741 0.00 0.00 32.94 3.71
5683 10219 8.022550 GGTCAAGTTAAACACTAGTACTCTCTC 58.977 40.741 0.00 0.00 32.94 3.20
5684 10220 7.039853 GGGTCAAGTTAAACACTAGTACTCTCT 60.040 40.741 0.00 0.00 32.94 3.10
5685 10221 7.089538 GGGTCAAGTTAAACACTAGTACTCTC 58.910 42.308 0.00 0.00 32.94 3.20
5686 10222 6.552350 TGGGTCAAGTTAAACACTAGTACTCT 59.448 38.462 0.00 0.00 32.94 3.24
5687 10223 6.752168 TGGGTCAAGTTAAACACTAGTACTC 58.248 40.000 0.00 0.00 32.94 2.59
5688 10224 6.736110 TGGGTCAAGTTAAACACTAGTACT 57.264 37.500 0.00 0.00 32.94 2.73
5689 10225 7.443272 ACAATGGGTCAAGTTAAACACTAGTAC 59.557 37.037 0.00 0.00 32.94 2.73
5690 10226 7.442969 CACAATGGGTCAAGTTAAACACTAGTA 59.557 37.037 0.00 0.00 32.94 1.82
5691 10227 6.262273 CACAATGGGTCAAGTTAAACACTAGT 59.738 38.462 0.00 0.00 32.94 2.57
5692 10228 6.293955 CCACAATGGGTCAAGTTAAACACTAG 60.294 42.308 0.00 0.00 31.63 2.57
5693 10229 5.533154 CCACAATGGGTCAAGTTAAACACTA 59.467 40.000 0.00 0.00 31.63 2.74
5694 10230 4.340950 CCACAATGGGTCAAGTTAAACACT 59.659 41.667 0.00 0.00 32.79 3.55
5695 10231 4.616953 CCACAATGGGTCAAGTTAAACAC 58.383 43.478 0.00 0.00 32.67 3.32
5696 10232 3.068873 GCCACAATGGGTCAAGTTAAACA 59.931 43.478 0.00 0.00 38.19 2.83
5697 10233 3.320826 AGCCACAATGGGTCAAGTTAAAC 59.679 43.478 0.00 0.00 46.99 2.01
5698 10234 3.571590 AGCCACAATGGGTCAAGTTAAA 58.428 40.909 0.00 0.00 46.99 1.52
5699 10235 3.237268 AGCCACAATGGGTCAAGTTAA 57.763 42.857 0.00 0.00 46.99 2.01
5700 10236 2.969821 AGCCACAATGGGTCAAGTTA 57.030 45.000 0.00 0.00 46.99 2.24
5701 10237 3.848353 AGCCACAATGGGTCAAGTT 57.152 47.368 0.00 0.00 46.99 2.66
5708 10244 1.005867 GCACACAAGCCACAATGGG 60.006 57.895 0.00 0.00 38.19 4.00
5709 10245 4.659480 GCACACAAGCCACAATGG 57.341 55.556 0.00 0.00 41.55 3.16
5717 10253 1.226945 ACGCAAAAGGCACACAAGC 60.227 52.632 0.00 0.00 45.17 4.01
5718 10254 0.179140 ACACGCAAAAGGCACACAAG 60.179 50.000 0.00 0.00 45.17 3.16
5719 10255 0.244994 AACACGCAAAAGGCACACAA 59.755 45.000 0.00 0.00 45.17 3.33
5720 10256 0.244994 AAACACGCAAAAGGCACACA 59.755 45.000 0.00 0.00 45.17 3.72
5721 10257 0.644843 CAAACACGCAAAAGGCACAC 59.355 50.000 0.00 0.00 45.17 3.82
5722 10258 1.080995 GCAAACACGCAAAAGGCACA 61.081 50.000 0.00 0.00 45.17 4.57
5723 10259 1.635810 GCAAACACGCAAAAGGCAC 59.364 52.632 0.00 0.00 45.17 5.01
5724 10260 1.520342 GGCAAACACGCAAAAGGCA 60.520 52.632 0.00 0.00 45.17 4.75
5725 10261 1.227234 AGGCAAACACGCAAAAGGC 60.227 52.632 0.00 0.00 39.90 4.35
5726 10262 0.179113 ACAGGCAAACACGCAAAAGG 60.179 50.000 0.00 0.00 0.00 3.11
5727 10263 0.922717 CACAGGCAAACACGCAAAAG 59.077 50.000 0.00 0.00 0.00 2.27
5728 10264 1.080995 GCACAGGCAAACACGCAAAA 61.081 50.000 0.00 0.00 40.72 2.44
5729 10265 1.518133 GCACAGGCAAACACGCAAA 60.518 52.632 0.00 0.00 40.72 3.68
5730 10266 2.103934 GCACAGGCAAACACGCAA 59.896 55.556 0.00 0.00 40.72 4.85
5731 10267 4.249020 CGCACAGGCAAACACGCA 62.249 61.111 0.00 0.00 41.24 5.24
5733 10269 4.980903 GGCGCACAGGCAAACACG 62.981 66.667 10.83 0.00 45.92 4.49
5741 10277 4.424566 GGCACATTGGCGCACAGG 62.425 66.667 10.83 0.00 31.79 4.00
5751 10287 8.735066 TTCCTTGGGAATTATCAATGGCACATT 61.735 37.037 0.00 0.00 39.22 2.71
5752 10288 7.321017 TTCCTTGGGAATTATCAATGGCACAT 61.321 38.462 0.00 0.00 39.22 3.21
5753 10289 6.048157 TTCCTTGGGAATTATCAATGGCACA 61.048 40.000 0.00 0.00 39.05 4.57
5754 10290 3.960102 TCCTTGGGAATTATCAATGGCAC 59.040 43.478 0.00 0.00 0.00 5.01
5755 10291 4.262891 TCCTTGGGAATTATCAATGGCA 57.737 40.909 0.00 0.00 0.00 4.92
5756 10292 5.604565 CTTTCCTTGGGAATTATCAATGGC 58.395 41.667 0.00 0.00 41.71 4.40
5757 10293 5.364735 AGCTTTCCTTGGGAATTATCAATGG 59.635 40.000 0.00 0.00 41.71 3.16
5758 10294 6.278363 CAGCTTTCCTTGGGAATTATCAATG 58.722 40.000 0.00 0.00 41.71 2.82
5759 10295 5.163374 GCAGCTTTCCTTGGGAATTATCAAT 60.163 40.000 0.00 0.00 41.71 2.57
5760 10296 4.160252 GCAGCTTTCCTTGGGAATTATCAA 59.840 41.667 0.00 0.00 41.71 2.57
5761 10297 3.701040 GCAGCTTTCCTTGGGAATTATCA 59.299 43.478 0.00 0.00 41.71 2.15
5762 10298 3.243201 CGCAGCTTTCCTTGGGAATTATC 60.243 47.826 0.00 0.00 41.71 1.75
5763 10299 2.689983 CGCAGCTTTCCTTGGGAATTAT 59.310 45.455 0.00 0.00 41.71 1.28
5764 10300 2.091541 CGCAGCTTTCCTTGGGAATTA 58.908 47.619 0.00 0.00 41.71 1.40
5765 10301 0.890683 CGCAGCTTTCCTTGGGAATT 59.109 50.000 0.00 0.00 41.71 2.17
5766 10302 0.251341 ACGCAGCTTTCCTTGGGAAT 60.251 50.000 0.00 0.00 41.71 3.01
5767 10303 1.150536 ACGCAGCTTTCCTTGGGAA 59.849 52.632 0.00 0.00 40.27 3.97
5768 10304 2.836154 ACGCAGCTTTCCTTGGGA 59.164 55.556 0.00 0.00 0.00 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.