Multiple sequence alignment - TraesCS3A01G429600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G429600 chr3A 100.000 3995 0 0 1 3995 672544024 672548018 0.000000e+00 7378.0
1 TraesCS3A01G429600 chr3A 82.903 310 34 9 172 473 673823813 673824111 1.100000e-65 261.0
2 TraesCS3A01G429600 chr3D 96.751 3293 84 11 707 3995 537138987 537142260 0.000000e+00 5467.0
3 TraesCS3A01G429600 chr3B 94.974 3323 117 29 707 3995 710581138 710584444 0.000000e+00 5166.0
4 TraesCS3A01G429600 chr3B 84.952 937 92 27 707 1612 710563398 710564316 0.000000e+00 904.0
5 TraesCS3A01G429600 chr3B 87.429 175 17 4 3 173 710575546 710575719 3.150000e-46 196.0
6 TraesCS3A01G429600 chr3B 83.333 216 31 4 180 393 512411405 512411193 1.130000e-45 195.0
7 TraesCS3A01G429600 chr4B 93.744 1023 37 12 2144 3154 22596592 22595585 0.000000e+00 1509.0
8 TraesCS3A01G429600 chr4B 93.663 505 28 1 1646 2146 22608776 22608272 0.000000e+00 752.0
9 TraesCS3A01G429600 chr4B 91.844 282 21 2 3152 3432 22595471 22595191 3.740000e-105 392.0
10 TraesCS3A01G429600 chr1D 85.301 1313 175 11 1690 2999 11413343 11414640 0.000000e+00 1339.0
11 TraesCS3A01G429600 chr1D 81.874 1313 212 15 1681 2986 19309208 19310501 0.000000e+00 1083.0
12 TraesCS3A01G429600 chr5D 87.376 404 49 2 171 573 232587482 232587884 2.810000e-126 462.0
13 TraesCS3A01G429600 chr5D 83.641 434 55 12 171 594 105351310 105350883 1.040000e-105 394.0
14 TraesCS3A01G429600 chr5D 79.104 134 20 6 1413 1541 440157591 440157721 7.110000e-13 86.1
15 TraesCS3A01G429600 chr2D 84.352 409 60 4 171 576 634071870 634071463 8.040000e-107 398.0
16 TraesCS3A01G429600 chr5A 87.500 320 38 2 171 489 361707997 361708315 6.310000e-98 368.0
17 TraesCS3A01G429600 chr5A 86.508 252 32 2 172 423 308458504 308458753 3.930000e-70 276.0
18 TraesCS3A01G429600 chr6D 85.755 351 38 8 171 515 91515336 91515680 1.060000e-95 361.0
19 TraesCS3A01G429600 chr6A 86.728 324 37 3 171 489 550622211 550622533 4.910000e-94 355.0
20 TraesCS3A01G429600 chr5B 87.868 272 31 2 173 444 226435469 226435200 6.440000e-83 318.0
21 TraesCS3A01G429600 chr7A 79.707 409 56 13 218 612 156570231 156570626 1.830000e-68 270.0
22 TraesCS3A01G429600 chr7A 83.636 165 21 5 1003 1163 86048244 86048406 2.490000e-32 150.0
23 TraesCS3A01G429600 chr7B 81.595 326 41 10 171 489 126181783 126181470 6.630000e-63 252.0
24 TraesCS3A01G429600 chr7B 81.818 308 40 9 171 473 205808096 205808392 1.110000e-60 244.0
25 TraesCS3A01G429600 chr7B 84.076 157 19 5 1003 1155 34610099 34610253 3.220000e-31 147.0
26 TraesCS3A01G429600 chr1A 83.230 161 23 4 456 612 252734134 252733974 1.160000e-30 145.0
27 TraesCS3A01G429600 chr7D 85.821 134 16 3 1003 1135 84986173 84986304 5.380000e-29 139.0
28 TraesCS3A01G429600 chr2B 80.311 193 26 6 426 612 431166110 431165924 6.960000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G429600 chr3A 672544024 672548018 3994 False 7378.0 7378 100.000 1 3995 1 chr3A.!!$F1 3994
1 TraesCS3A01G429600 chr3D 537138987 537142260 3273 False 5467.0 5467 96.751 707 3995 1 chr3D.!!$F1 3288
2 TraesCS3A01G429600 chr3B 710581138 710584444 3306 False 5166.0 5166 94.974 707 3995 1 chr3B.!!$F3 3288
3 TraesCS3A01G429600 chr3B 710563398 710564316 918 False 904.0 904 84.952 707 1612 1 chr3B.!!$F1 905
4 TraesCS3A01G429600 chr4B 22595191 22596592 1401 True 950.5 1509 92.794 2144 3432 2 chr4B.!!$R2 1288
5 TraesCS3A01G429600 chr4B 22608272 22608776 504 True 752.0 752 93.663 1646 2146 1 chr4B.!!$R1 500
6 TraesCS3A01G429600 chr1D 11413343 11414640 1297 False 1339.0 1339 85.301 1690 2999 1 chr1D.!!$F1 1309
7 TraesCS3A01G429600 chr1D 19309208 19310501 1293 False 1083.0 1083 81.874 1681 2986 1 chr1D.!!$F2 1305

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
522 523 0.036952 ATGAAGACCAGCCAGTCACG 60.037 55.0 6.50 0.00 39.34 4.35 F
658 659 0.037232 AGTTGCTCTAACCGGAGTGC 60.037 55.0 9.46 9.55 40.24 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 2241 1.411651 GCCTGACCAGTATCCCCTCC 61.412 65.000 0.00 0.0 0.00 4.3 R
3169 3357 2.358898 AGCATACGTCATCCAAAATGCC 59.641 45.455 11.05 0.0 40.38 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.755952 GGCCCTAAGACATTCCCAAT 57.244 50.000 0.00 0.00 0.00 3.16
20 21 2.310538 GGCCCTAAGACATTCCCAATG 58.689 52.381 0.00 0.00 44.48 2.82
65 66 8.773404 ACATATGTAAATTAATCTCTACCGCC 57.227 34.615 6.56 0.00 0.00 6.13
66 67 8.372459 ACATATGTAAATTAATCTCTACCGCCA 58.628 33.333 6.56 0.00 0.00 5.69
67 68 9.383519 CATATGTAAATTAATCTCTACCGCCAT 57.616 33.333 0.00 0.00 0.00 4.40
70 71 8.597662 TGTAAATTAATCTCTACCGCCATAAC 57.402 34.615 0.00 0.00 0.00 1.89
71 72 7.658575 TGTAAATTAATCTCTACCGCCATAACC 59.341 37.037 0.00 0.00 0.00 2.85
72 73 6.435292 AATTAATCTCTACCGCCATAACCT 57.565 37.500 0.00 0.00 0.00 3.50
73 74 7.549147 AATTAATCTCTACCGCCATAACCTA 57.451 36.000 0.00 0.00 0.00 3.08
74 75 6.982160 TTAATCTCTACCGCCATAACCTAA 57.018 37.500 0.00 0.00 0.00 2.69
75 76 5.881923 AATCTCTACCGCCATAACCTAAA 57.118 39.130 0.00 0.00 0.00 1.85
76 77 4.660789 TCTCTACCGCCATAACCTAAAC 57.339 45.455 0.00 0.00 0.00 2.01
77 78 3.067180 TCTCTACCGCCATAACCTAAACG 59.933 47.826 0.00 0.00 0.00 3.60
78 79 2.101249 TCTACCGCCATAACCTAAACGG 59.899 50.000 0.00 0.00 45.86 4.44
79 80 0.107557 ACCGCCATAACCTAAACGGG 60.108 55.000 4.13 0.00 44.73 5.28
80 81 0.107557 CCGCCATAACCTAAACGGGT 60.108 55.000 0.00 0.00 42.05 5.28
82 83 1.667212 CGCCATAACCTAAACGGGTTC 59.333 52.381 1.97 0.00 45.38 3.62
83 84 2.713877 GCCATAACCTAAACGGGTTCA 58.286 47.619 1.97 0.00 45.38 3.18
84 85 3.083293 GCCATAACCTAAACGGGTTCAA 58.917 45.455 1.97 0.00 45.38 2.69
85 86 3.506844 GCCATAACCTAAACGGGTTCAAA 59.493 43.478 1.97 0.00 45.38 2.69
86 87 4.158949 GCCATAACCTAAACGGGTTCAAAT 59.841 41.667 1.97 0.00 45.38 2.32
87 88 5.646606 CCATAACCTAAACGGGTTCAAATG 58.353 41.667 1.97 2.25 45.38 2.32
88 89 5.184287 CCATAACCTAAACGGGTTCAAATGT 59.816 40.000 1.97 0.00 45.38 2.71
89 90 6.374894 CCATAACCTAAACGGGTTCAAATGTA 59.625 38.462 1.97 0.00 45.38 2.29
90 91 5.694231 AACCTAAACGGGTTCAAATGTAC 57.306 39.130 0.00 0.00 45.38 2.90
91 92 4.716794 ACCTAAACGGGTTCAAATGTACA 58.283 39.130 0.00 0.00 35.89 2.90
92 93 4.516321 ACCTAAACGGGTTCAAATGTACAC 59.484 41.667 0.00 0.00 35.89 2.90
93 94 4.515944 CCTAAACGGGTTCAAATGTACACA 59.484 41.667 0.00 0.00 0.00 3.72
94 95 5.182380 CCTAAACGGGTTCAAATGTACACAT 59.818 40.000 0.00 0.00 38.41 3.21
95 96 4.759516 AACGGGTTCAAATGTACACATC 57.240 40.909 0.00 0.00 35.10 3.06
96 97 4.015872 ACGGGTTCAAATGTACACATCT 57.984 40.909 0.00 0.00 35.10 2.90
97 98 4.394729 ACGGGTTCAAATGTACACATCTT 58.605 39.130 0.00 0.00 35.10 2.40
98 99 4.825085 ACGGGTTCAAATGTACACATCTTT 59.175 37.500 0.00 0.00 35.10 2.52
99 100 5.048991 ACGGGTTCAAATGTACACATCTTTC 60.049 40.000 0.00 0.00 35.10 2.62
100 101 5.390613 GGGTTCAAATGTACACATCTTTCG 58.609 41.667 0.00 0.00 35.10 3.46
101 102 5.048991 GGGTTCAAATGTACACATCTTTCGT 60.049 40.000 0.00 0.00 35.10 3.85
102 103 5.851177 GGTTCAAATGTACACATCTTTCGTG 59.149 40.000 0.00 0.00 40.32 4.35
104 105 6.612247 TCAAATGTACACATCTTTCGTGTT 57.388 33.333 0.00 0.00 45.12 3.32
105 106 6.655062 TCAAATGTACACATCTTTCGTGTTC 58.345 36.000 0.00 0.00 45.12 3.18
106 107 4.903638 ATGTACACATCTTTCGTGTTCG 57.096 40.909 0.00 0.00 45.12 3.95
107 108 3.708890 TGTACACATCTTTCGTGTTCGT 58.291 40.909 0.76 0.00 45.12 3.85
108 109 3.487942 TGTACACATCTTTCGTGTTCGTG 59.512 43.478 0.76 0.00 45.12 4.35
109 110 1.260561 ACACATCTTTCGTGTTCGTGC 59.739 47.619 0.00 0.00 45.12 5.34
110 111 1.526887 CACATCTTTCGTGTTCGTGCT 59.473 47.619 0.00 0.00 38.33 4.40
111 112 1.792949 ACATCTTTCGTGTTCGTGCTC 59.207 47.619 0.00 0.00 38.33 4.26
112 113 2.061773 CATCTTTCGTGTTCGTGCTCT 58.938 47.619 0.00 0.00 38.33 4.09
113 114 1.487482 TCTTTCGTGTTCGTGCTCTG 58.513 50.000 0.00 0.00 38.33 3.35
114 115 1.202371 TCTTTCGTGTTCGTGCTCTGT 60.202 47.619 0.00 0.00 38.33 3.41
115 116 1.593006 CTTTCGTGTTCGTGCTCTGTT 59.407 47.619 0.00 0.00 38.33 3.16
116 117 0.927537 TTCGTGTTCGTGCTCTGTTG 59.072 50.000 0.00 0.00 38.33 3.33
117 118 0.101579 TCGTGTTCGTGCTCTGTTGA 59.898 50.000 0.00 0.00 38.33 3.18
118 119 0.504384 CGTGTTCGTGCTCTGTTGAG 59.496 55.000 0.00 0.00 42.96 3.02
119 120 1.852942 GTGTTCGTGCTCTGTTGAGA 58.147 50.000 0.00 0.00 42.73 3.27
120 121 5.918234 TCGTGTTCGTGCTCTGTTGAGAG 62.918 52.174 0.00 0.00 42.12 3.20
133 134 5.477510 TCTGTTGAGAGAAGATCAGAAAGC 58.522 41.667 0.00 0.00 0.00 3.51
134 135 4.240888 TGTTGAGAGAAGATCAGAAAGCG 58.759 43.478 0.00 0.00 0.00 4.68
135 136 4.021981 TGTTGAGAGAAGATCAGAAAGCGA 60.022 41.667 0.00 0.00 0.00 4.93
136 137 4.998671 TGAGAGAAGATCAGAAAGCGAT 57.001 40.909 0.00 0.00 0.00 4.58
137 138 4.680702 TGAGAGAAGATCAGAAAGCGATG 58.319 43.478 0.00 0.00 0.00 3.84
138 139 4.400567 TGAGAGAAGATCAGAAAGCGATGA 59.599 41.667 0.00 0.00 0.00 2.92
139 140 4.935702 AGAGAAGATCAGAAAGCGATGAG 58.064 43.478 0.00 0.00 0.00 2.90
140 141 4.402155 AGAGAAGATCAGAAAGCGATGAGT 59.598 41.667 0.00 0.00 0.00 3.41
141 142 4.431809 AGAAGATCAGAAAGCGATGAGTG 58.568 43.478 0.00 0.00 0.00 3.51
142 143 3.883830 AGATCAGAAAGCGATGAGTGT 57.116 42.857 0.00 0.00 0.00 3.55
143 144 3.779759 AGATCAGAAAGCGATGAGTGTC 58.220 45.455 0.00 0.00 0.00 3.67
144 145 1.982612 TCAGAAAGCGATGAGTGTCG 58.017 50.000 0.00 0.00 44.14 4.35
153 154 3.340337 CGATGAGTGTCGCTTAGATGA 57.660 47.619 0.00 0.00 34.56 2.92
154 155 3.894920 CGATGAGTGTCGCTTAGATGAT 58.105 45.455 0.00 0.00 34.56 2.45
155 156 3.911365 CGATGAGTGTCGCTTAGATGATC 59.089 47.826 0.00 0.00 34.56 2.92
156 157 4.555511 CGATGAGTGTCGCTTAGATGATCA 60.556 45.833 0.00 0.00 34.56 2.92
157 158 4.298744 TGAGTGTCGCTTAGATGATCAG 57.701 45.455 0.09 0.00 0.00 2.90
158 159 3.067320 TGAGTGTCGCTTAGATGATCAGG 59.933 47.826 0.09 0.00 0.00 3.86
159 160 3.027412 AGTGTCGCTTAGATGATCAGGT 58.973 45.455 0.09 0.00 0.00 4.00
160 161 3.449018 AGTGTCGCTTAGATGATCAGGTT 59.551 43.478 0.09 0.00 0.00 3.50
161 162 4.081420 AGTGTCGCTTAGATGATCAGGTTT 60.081 41.667 0.09 0.00 0.00 3.27
162 163 4.631813 GTGTCGCTTAGATGATCAGGTTTT 59.368 41.667 0.09 0.00 0.00 2.43
163 164 5.122396 GTGTCGCTTAGATGATCAGGTTTTT 59.878 40.000 0.09 0.00 0.00 1.94
197 198 6.402456 GTATCTACGATTAAGGGTTCCAGT 57.598 41.667 0.00 0.00 0.00 4.00
198 199 5.952347 ATCTACGATTAAGGGTTCCAGTT 57.048 39.130 0.00 0.00 0.00 3.16
199 200 5.750352 TCTACGATTAAGGGTTCCAGTTT 57.250 39.130 0.00 0.00 0.00 2.66
200 201 5.727434 TCTACGATTAAGGGTTCCAGTTTC 58.273 41.667 0.00 0.00 0.00 2.78
201 202 4.360951 ACGATTAAGGGTTCCAGTTTCA 57.639 40.909 0.00 0.00 0.00 2.69
202 203 4.324267 ACGATTAAGGGTTCCAGTTTCAG 58.676 43.478 0.00 0.00 0.00 3.02
203 204 3.689649 CGATTAAGGGTTCCAGTTTCAGG 59.310 47.826 0.00 0.00 0.00 3.86
204 205 3.518992 TTAAGGGTTCCAGTTTCAGGG 57.481 47.619 0.00 0.00 0.00 4.45
205 206 1.231963 AAGGGTTCCAGTTTCAGGGT 58.768 50.000 0.00 0.00 0.00 4.34
206 207 0.478507 AGGGTTCCAGTTTCAGGGTG 59.521 55.000 0.00 0.00 0.00 4.61
207 208 0.476771 GGGTTCCAGTTTCAGGGTGA 59.523 55.000 0.00 0.00 0.00 4.02
208 209 1.545651 GGGTTCCAGTTTCAGGGTGAG 60.546 57.143 0.00 0.00 0.00 3.51
209 210 1.420138 GGTTCCAGTTTCAGGGTGAGA 59.580 52.381 0.00 0.00 0.00 3.27
210 211 2.551071 GGTTCCAGTTTCAGGGTGAGAG 60.551 54.545 0.00 0.00 0.00 3.20
211 212 2.103153 TCCAGTTTCAGGGTGAGAGT 57.897 50.000 0.00 0.00 0.00 3.24
212 213 1.694150 TCCAGTTTCAGGGTGAGAGTG 59.306 52.381 0.00 0.00 33.24 3.51
213 214 1.417890 CCAGTTTCAGGGTGAGAGTGT 59.582 52.381 2.63 0.00 31.99 3.55
214 215 2.158755 CCAGTTTCAGGGTGAGAGTGTT 60.159 50.000 2.63 0.00 31.99 3.32
215 216 2.874701 CAGTTTCAGGGTGAGAGTGTTG 59.125 50.000 0.00 0.00 30.05 3.33
216 217 2.505819 AGTTTCAGGGTGAGAGTGTTGT 59.494 45.455 0.00 0.00 0.00 3.32
217 218 2.614057 GTTTCAGGGTGAGAGTGTTGTG 59.386 50.000 0.00 0.00 0.00 3.33
218 219 0.106708 TCAGGGTGAGAGTGTTGTGC 59.893 55.000 0.00 0.00 0.00 4.57
219 220 0.886490 CAGGGTGAGAGTGTTGTGCC 60.886 60.000 0.00 0.00 0.00 5.01
220 221 1.056700 AGGGTGAGAGTGTTGTGCCT 61.057 55.000 0.00 0.00 0.00 4.75
221 222 0.886490 GGGTGAGAGTGTTGTGCCTG 60.886 60.000 0.00 0.00 0.00 4.85
222 223 0.106708 GGTGAGAGTGTTGTGCCTGA 59.893 55.000 0.00 0.00 0.00 3.86
223 224 1.506493 GTGAGAGTGTTGTGCCTGAG 58.494 55.000 0.00 0.00 0.00 3.35
224 225 1.123077 TGAGAGTGTTGTGCCTGAGT 58.877 50.000 0.00 0.00 0.00 3.41
225 226 2.035961 GTGAGAGTGTTGTGCCTGAGTA 59.964 50.000 0.00 0.00 0.00 2.59
226 227 2.899900 TGAGAGTGTTGTGCCTGAGTAT 59.100 45.455 0.00 0.00 0.00 2.12
227 228 3.257393 GAGAGTGTTGTGCCTGAGTATG 58.743 50.000 0.00 0.00 0.00 2.39
228 229 2.027745 AGAGTGTTGTGCCTGAGTATGG 60.028 50.000 0.00 0.00 0.00 2.74
229 230 1.977854 AGTGTTGTGCCTGAGTATGGA 59.022 47.619 0.00 0.00 0.00 3.41
230 231 2.371841 AGTGTTGTGCCTGAGTATGGAA 59.628 45.455 0.00 0.00 0.00 3.53
231 232 2.744202 GTGTTGTGCCTGAGTATGGAAG 59.256 50.000 0.00 0.00 0.00 3.46
232 233 2.637382 TGTTGTGCCTGAGTATGGAAGA 59.363 45.455 0.00 0.00 0.00 2.87
233 234 3.265791 GTTGTGCCTGAGTATGGAAGAG 58.734 50.000 0.00 0.00 0.00 2.85
234 235 1.208052 TGTGCCTGAGTATGGAAGAGC 59.792 52.381 0.00 0.00 0.00 4.09
235 236 0.461548 TGCCTGAGTATGGAAGAGCG 59.538 55.000 0.00 0.00 0.00 5.03
236 237 0.249657 GCCTGAGTATGGAAGAGCGG 60.250 60.000 0.00 0.00 0.00 5.52
237 238 0.249657 CCTGAGTATGGAAGAGCGGC 60.250 60.000 0.00 0.00 0.00 6.53
238 239 0.461548 CTGAGTATGGAAGAGCGGCA 59.538 55.000 1.45 0.00 0.00 5.69
239 240 0.901827 TGAGTATGGAAGAGCGGCAA 59.098 50.000 1.45 0.00 0.00 4.52
240 241 1.291132 GAGTATGGAAGAGCGGCAAC 58.709 55.000 1.45 0.00 0.00 4.17
255 256 3.724295 GGCAACGTCTGAATAGTTCAC 57.276 47.619 0.00 0.00 35.46 3.18
256 257 3.064207 GGCAACGTCTGAATAGTTCACA 58.936 45.455 0.00 0.00 35.46 3.58
257 258 3.684788 GGCAACGTCTGAATAGTTCACAT 59.315 43.478 0.00 0.00 35.46 3.21
258 259 4.868171 GGCAACGTCTGAATAGTTCACATA 59.132 41.667 0.00 0.00 35.46 2.29
259 260 5.350365 GGCAACGTCTGAATAGTTCACATAA 59.650 40.000 0.00 0.00 35.46 1.90
260 261 6.037172 GGCAACGTCTGAATAGTTCACATAAT 59.963 38.462 0.00 0.00 35.46 1.28
261 262 7.414098 GGCAACGTCTGAATAGTTCACATAATT 60.414 37.037 0.00 0.00 35.46 1.40
262 263 7.962918 GCAACGTCTGAATAGTTCACATAATTT 59.037 33.333 0.00 0.00 35.46 1.82
263 264 9.478019 CAACGTCTGAATAGTTCACATAATTTC 57.522 33.333 0.00 0.00 35.46 2.17
264 265 8.771920 ACGTCTGAATAGTTCACATAATTTCA 57.228 30.769 0.00 0.00 35.46 2.69
265 266 9.383519 ACGTCTGAATAGTTCACATAATTTCAT 57.616 29.630 0.00 0.00 35.46 2.57
266 267 9.855361 CGTCTGAATAGTTCACATAATTTCATC 57.145 33.333 0.00 0.00 35.46 2.92
286 287 4.762956 TCATGAAATGCGTGATTGTGAA 57.237 36.364 0.00 0.00 46.21 3.18
287 288 5.118642 TCATGAAATGCGTGATTGTGAAA 57.881 34.783 0.00 0.00 46.21 2.69
288 289 4.916831 TCATGAAATGCGTGATTGTGAAAC 59.083 37.500 0.00 0.00 46.21 2.78
289 290 4.566545 TGAAATGCGTGATTGTGAAACT 57.433 36.364 0.00 0.00 38.04 2.66
290 291 4.536065 TGAAATGCGTGATTGTGAAACTC 58.464 39.130 0.00 0.00 38.04 3.01
291 292 4.036144 TGAAATGCGTGATTGTGAAACTCA 59.964 37.500 0.00 0.00 38.04 3.41
292 293 9.176781 CATGAAATGCGTGATTGTGAAACTCAC 62.177 40.741 0.00 0.00 42.13 3.51
308 309 9.495754 GTGAAACTCACATGAAGCTATAAAATC 57.504 33.333 0.00 0.00 46.22 2.17
309 310 9.230122 TGAAACTCACATGAAGCTATAAAATCA 57.770 29.630 0.00 0.00 0.00 2.57
314 315 9.459640 CTCACATGAAGCTATAAAATCATTTGG 57.540 33.333 0.00 0.06 33.15 3.28
315 316 8.970020 TCACATGAAGCTATAAAATCATTTGGT 58.030 29.630 0.00 0.00 33.15 3.67
316 317 9.241317 CACATGAAGCTATAAAATCATTTGGTC 57.759 33.333 0.00 0.00 30.25 4.02
317 318 8.131100 ACATGAAGCTATAAAATCATTTGGTCG 58.869 33.333 0.00 0.00 30.39 4.79
318 319 7.857734 TGAAGCTATAAAATCATTTGGTCGA 57.142 32.000 0.00 0.00 0.00 4.20
319 320 7.919690 TGAAGCTATAAAATCATTTGGTCGAG 58.080 34.615 0.00 0.00 0.00 4.04
320 321 7.552687 TGAAGCTATAAAATCATTTGGTCGAGT 59.447 33.333 0.00 0.00 0.00 4.18
321 322 8.958119 AAGCTATAAAATCATTTGGTCGAGTA 57.042 30.769 0.00 0.00 0.00 2.59
322 323 9.561069 AAGCTATAAAATCATTTGGTCGAGTAT 57.439 29.630 0.00 0.00 0.00 2.12
332 333 9.862371 ATCATTTGGTCGAGTATATGTAAGATC 57.138 33.333 0.00 0.00 0.00 2.75
333 334 8.856103 TCATTTGGTCGAGTATATGTAAGATCA 58.144 33.333 0.00 0.00 0.00 2.92
334 335 9.645059 CATTTGGTCGAGTATATGTAAGATCAT 57.355 33.333 0.00 0.00 0.00 2.45
335 336 9.645059 ATTTGGTCGAGTATATGTAAGATCATG 57.355 33.333 0.00 0.00 0.00 3.07
336 337 7.761038 TGGTCGAGTATATGTAAGATCATGT 57.239 36.000 0.00 0.00 0.00 3.21
337 338 8.178313 TGGTCGAGTATATGTAAGATCATGTT 57.822 34.615 0.00 0.00 0.00 2.71
338 339 8.082242 TGGTCGAGTATATGTAAGATCATGTTG 58.918 37.037 0.00 0.00 0.00 3.33
339 340 7.542477 GGTCGAGTATATGTAAGATCATGTTGG 59.458 40.741 0.00 0.00 0.00 3.77
340 341 8.082852 GTCGAGTATATGTAAGATCATGTTGGT 58.917 37.037 0.00 0.00 0.00 3.67
341 342 9.292195 TCGAGTATATGTAAGATCATGTTGGTA 57.708 33.333 0.00 0.00 0.00 3.25
342 343 9.908152 CGAGTATATGTAAGATCATGTTGGTAA 57.092 33.333 0.00 0.00 0.00 2.85
344 345 9.998106 AGTATATGTAAGATCATGTTGGTAACC 57.002 33.333 0.00 0.00 0.00 2.85
345 346 9.772973 GTATATGTAAGATCATGTTGGTAACCA 57.227 33.333 0.00 0.00 0.00 3.67
347 348 9.866655 ATATGTAAGATCATGTTGGTAACCAAT 57.133 29.630 0.00 0.00 45.80 3.16
349 350 9.693739 ATGTAAGATCATGTTGGTAACCAATAA 57.306 29.630 0.00 0.00 45.80 1.40
350 351 9.521841 TGTAAGATCATGTTGGTAACCAATAAA 57.478 29.630 0.00 0.00 45.80 1.40
353 354 8.593945 AGATCATGTTGGTAACCAATAAATGT 57.406 30.769 0.00 0.00 45.80 2.71
354 355 9.693739 AGATCATGTTGGTAACCAATAAATGTA 57.306 29.630 0.00 0.00 45.80 2.29
357 358 8.908903 TCATGTTGGTAACCAATAAATGTATCC 58.091 33.333 0.00 0.00 45.80 2.59
358 359 8.912988 CATGTTGGTAACCAATAAATGTATCCT 58.087 33.333 0.00 0.00 45.80 3.24
359 360 8.887264 TGTTGGTAACCAATAAATGTATCCTT 57.113 30.769 0.00 0.00 45.80 3.36
360 361 9.315363 TGTTGGTAACCAATAAATGTATCCTTT 57.685 29.630 0.00 0.00 45.80 3.11
374 375 9.791801 AAATGTATCCTTTTTATTTGGCTTTGT 57.208 25.926 0.00 0.00 0.00 2.83
380 381 8.439993 TCCTTTTTATTTGGCTTTGTAAAACC 57.560 30.769 0.00 0.00 0.00 3.27
381 382 8.047310 TCCTTTTTATTTGGCTTTGTAAAACCA 58.953 29.630 0.00 0.00 32.62 3.67
382 383 8.845227 CCTTTTTATTTGGCTTTGTAAAACCAT 58.155 29.630 0.74 0.00 34.40 3.55
383 384 9.662545 CTTTTTATTTGGCTTTGTAAAACCATG 57.337 29.630 0.74 0.00 34.40 3.66
384 385 8.738645 TTTTATTTGGCTTTGTAAAACCATGT 57.261 26.923 0.74 0.00 34.40 3.21
385 386 7.721286 TTATTTGGCTTTGTAAAACCATGTG 57.279 32.000 0.74 0.00 34.40 3.21
386 387 5.344743 TTTGGCTTTGTAAAACCATGTGA 57.655 34.783 0.74 0.00 34.40 3.58
387 388 4.582701 TGGCTTTGTAAAACCATGTGAG 57.417 40.909 0.00 0.00 29.66 3.51
388 389 4.211125 TGGCTTTGTAAAACCATGTGAGA 58.789 39.130 0.00 0.00 29.66 3.27
389 390 4.037446 TGGCTTTGTAAAACCATGTGAGAC 59.963 41.667 0.00 0.00 29.66 3.36
390 391 4.037446 GGCTTTGTAAAACCATGTGAGACA 59.963 41.667 0.00 0.00 0.00 3.41
391 392 5.451242 GGCTTTGTAAAACCATGTGAGACAA 60.451 40.000 0.00 0.00 0.00 3.18
392 393 6.215845 GCTTTGTAAAACCATGTGAGACAAT 58.784 36.000 0.00 0.00 0.00 2.71
393 394 6.701400 GCTTTGTAAAACCATGTGAGACAATT 59.299 34.615 0.00 0.00 0.00 2.32
394 395 7.224557 GCTTTGTAAAACCATGTGAGACAATTT 59.775 33.333 0.00 0.00 0.00 1.82
395 396 9.743057 CTTTGTAAAACCATGTGAGACAATTTA 57.257 29.630 0.00 0.00 0.00 1.40
408 409 9.134734 TGTGAGACAATTTAATTTTTATTCGGC 57.865 29.630 0.00 0.00 0.00 5.54
409 410 9.353999 GTGAGACAATTTAATTTTTATTCGGCT 57.646 29.630 0.00 0.00 0.00 5.52
410 411 9.921637 TGAGACAATTTAATTTTTATTCGGCTT 57.078 25.926 0.00 0.00 0.00 4.35
412 413 9.705290 AGACAATTTAATTTTTATTCGGCTTGT 57.295 25.926 0.00 0.00 0.00 3.16
423 424 9.968870 TTTTTATTCGGCTTGTAAAACTATGTT 57.031 25.926 0.00 0.00 29.79 2.71
424 425 9.968870 TTTTATTCGGCTTGTAAAACTATGTTT 57.031 25.926 0.00 0.00 0.00 2.83
425 426 9.968870 TTTATTCGGCTTGTAAAACTATGTTTT 57.031 25.926 12.15 12.15 0.00 2.43
429 430 9.968870 TTCGGCTTGTAAAACTATGTTTTATTT 57.031 25.926 15.61 0.00 0.00 1.40
430 431 9.400638 TCGGCTTGTAAAACTATGTTTTATTTG 57.599 29.630 15.61 10.81 0.00 2.32
431 432 8.643752 CGGCTTGTAAAACTATGTTTTATTTGG 58.356 33.333 15.61 9.56 0.00 3.28
432 433 9.483916 GGCTTGTAAAACTATGTTTTATTTGGT 57.516 29.630 15.61 0.00 0.00 3.67
445 446 8.810652 TGTTTTATTTGGTTCTGAAACTATGC 57.189 30.769 7.02 0.00 35.61 3.14
446 447 8.637986 TGTTTTATTTGGTTCTGAAACTATGCT 58.362 29.630 7.02 0.00 35.61 3.79
447 448 9.476202 GTTTTATTTGGTTCTGAAACTATGCTT 57.524 29.630 7.02 0.00 35.61 3.91
497 498 7.019774 GCTTATGAAATATGCAGAGTGTTCA 57.980 36.000 7.18 7.18 46.01 3.18
498 499 7.646314 GCTTATGAAATATGCAGAGTGTTCAT 58.354 34.615 16.91 16.91 46.01 2.57
499 500 8.133627 GCTTATGAAATATGCAGAGTGTTCATT 58.866 33.333 17.57 7.28 46.01 2.57
500 501 9.447040 CTTATGAAATATGCAGAGTGTTCATTG 57.553 33.333 17.57 10.64 37.07 2.82
501 502 7.634671 ATGAAATATGCAGAGTGTTCATTGA 57.365 32.000 10.32 0.00 33.12 2.57
502 503 7.451501 TGAAATATGCAGAGTGTTCATTGAA 57.548 32.000 0.00 0.00 0.00 2.69
503 504 7.884257 TGAAATATGCAGAGTGTTCATTGAAA 58.116 30.769 0.00 0.00 0.00 2.69
504 505 8.525316 TGAAATATGCAGAGTGTTCATTGAAAT 58.475 29.630 0.00 0.00 0.00 2.17
505 506 8.697846 AAATATGCAGAGTGTTCATTGAAATG 57.302 30.769 0.00 0.00 37.75 2.32
506 507 5.970317 ATGCAGAGTGTTCATTGAAATGA 57.030 34.783 0.00 1.55 43.28 2.57
516 517 3.765381 TCATTGAAATGAAGACCAGCCA 58.235 40.909 3.24 0.00 42.11 4.75
517 518 3.760151 TCATTGAAATGAAGACCAGCCAG 59.240 43.478 3.24 0.00 42.11 4.85
518 519 2.957402 TGAAATGAAGACCAGCCAGT 57.043 45.000 0.00 0.00 0.00 4.00
519 520 2.783135 TGAAATGAAGACCAGCCAGTC 58.217 47.619 0.00 0.00 37.01 3.51
520 521 2.106338 TGAAATGAAGACCAGCCAGTCA 59.894 45.455 6.50 0.00 39.34 3.41
521 522 2.191128 AATGAAGACCAGCCAGTCAC 57.809 50.000 6.50 1.47 39.34 3.67
522 523 0.036952 ATGAAGACCAGCCAGTCACG 60.037 55.000 6.50 0.00 39.34 4.35
523 524 2.029844 GAAGACCAGCCAGTCACGC 61.030 63.158 6.50 0.00 39.34 5.34
524 525 3.865929 AAGACCAGCCAGTCACGCG 62.866 63.158 3.53 3.53 39.34 6.01
528 529 4.063967 CAGCCAGTCACGCGGGTA 62.064 66.667 8.89 0.00 34.75 3.69
529 530 3.307906 AGCCAGTCACGCGGGTAA 61.308 61.111 8.89 0.00 34.75 2.85
530 531 2.357760 GCCAGTCACGCGGGTAAA 60.358 61.111 8.89 0.00 34.75 2.01
531 532 1.743995 GCCAGTCACGCGGGTAAAT 60.744 57.895 8.89 0.00 34.75 1.40
532 533 0.460635 GCCAGTCACGCGGGTAAATA 60.461 55.000 8.89 0.00 34.75 1.40
533 534 1.808891 GCCAGTCACGCGGGTAAATAT 60.809 52.381 8.89 0.00 34.75 1.28
534 535 1.864711 CCAGTCACGCGGGTAAATATG 59.135 52.381 8.89 0.00 0.00 1.78
535 536 1.864711 CAGTCACGCGGGTAAATATGG 59.135 52.381 8.89 0.00 0.00 2.74
536 537 1.202604 AGTCACGCGGGTAAATATGGG 60.203 52.381 8.89 0.00 0.00 4.00
537 538 0.831966 TCACGCGGGTAAATATGGGT 59.168 50.000 8.89 0.00 0.00 4.51
538 539 1.202557 TCACGCGGGTAAATATGGGTC 60.203 52.381 8.89 0.00 0.00 4.46
539 540 0.831966 ACGCGGGTAAATATGGGTCA 59.168 50.000 12.47 0.00 0.00 4.02
540 541 1.202604 ACGCGGGTAAATATGGGTCAG 60.203 52.381 12.47 0.00 0.00 3.51
541 542 1.235724 GCGGGTAAATATGGGTCAGC 58.764 55.000 0.00 0.00 0.00 4.26
542 543 1.508632 CGGGTAAATATGGGTCAGCG 58.491 55.000 0.00 0.00 0.00 5.18
543 544 1.235724 GGGTAAATATGGGTCAGCGC 58.764 55.000 0.00 0.00 0.00 5.92
544 545 0.865769 GGTAAATATGGGTCAGCGCG 59.134 55.000 0.00 0.00 0.00 6.86
545 546 1.578583 GTAAATATGGGTCAGCGCGT 58.421 50.000 8.43 0.00 0.00 6.01
546 547 1.937899 GTAAATATGGGTCAGCGCGTT 59.062 47.619 8.43 0.00 0.00 4.84
547 548 0.732571 AAATATGGGTCAGCGCGTTG 59.267 50.000 17.58 17.58 0.00 4.10
548 549 0.107897 AATATGGGTCAGCGCGTTGA 60.108 50.000 22.26 22.26 0.00 3.18
549 550 0.107897 ATATGGGTCAGCGCGTTGAA 60.108 50.000 27.38 12.80 0.00 2.69
550 551 1.017177 TATGGGTCAGCGCGTTGAAC 61.017 55.000 30.01 30.01 33.96 3.18
551 552 4.072088 GGGTCAGCGCGTTGAACG 62.072 66.667 30.35 14.16 45.88 3.95
561 562 2.699910 CGTTGAACGCATTGCTGAC 58.300 52.632 4.26 0.00 33.65 3.51
562 563 0.725784 CGTTGAACGCATTGCTGACC 60.726 55.000 4.26 0.00 33.65 4.02
563 564 0.387239 GTTGAACGCATTGCTGACCC 60.387 55.000 7.12 0.00 0.00 4.46
564 565 0.821301 TTGAACGCATTGCTGACCCA 60.821 50.000 7.12 0.00 0.00 4.51
565 566 0.821301 TGAACGCATTGCTGACCCAA 60.821 50.000 7.12 0.00 0.00 4.12
566 567 0.313672 GAACGCATTGCTGACCCAAA 59.686 50.000 7.12 0.00 0.00 3.28
567 568 0.968405 AACGCATTGCTGACCCAAAT 59.032 45.000 7.12 0.00 0.00 2.32
568 569 1.832883 ACGCATTGCTGACCCAAATA 58.167 45.000 7.12 0.00 0.00 1.40
569 570 2.166829 ACGCATTGCTGACCCAAATAA 58.833 42.857 7.12 0.00 0.00 1.40
570 571 2.560542 ACGCATTGCTGACCCAAATAAA 59.439 40.909 7.12 0.00 0.00 1.40
571 572 3.006323 ACGCATTGCTGACCCAAATAAAA 59.994 39.130 7.12 0.00 0.00 1.52
572 573 3.993081 CGCATTGCTGACCCAAATAAAAA 59.007 39.130 7.12 0.00 0.00 1.94
590 591 1.755179 AAAAGATGGCATCGAGTGGG 58.245 50.000 21.01 0.00 0.00 4.61
591 592 0.749454 AAAGATGGCATCGAGTGGGC 60.749 55.000 21.01 0.00 0.00 5.36
592 593 2.930385 AAGATGGCATCGAGTGGGCG 62.930 60.000 21.01 0.00 0.00 6.13
593 594 4.552365 ATGGCATCGAGTGGGCGG 62.552 66.667 0.00 0.00 0.00 6.13
617 618 2.779755 TCCACACGGATAAATGTGCT 57.220 45.000 0.00 0.00 44.01 4.40
618 619 2.355197 TCCACACGGATAAATGTGCTG 58.645 47.619 0.00 0.00 44.01 4.41
619 620 2.083774 CCACACGGATAAATGTGCTGT 58.916 47.619 0.00 0.00 44.01 4.40
620 621 2.095853 CCACACGGATAAATGTGCTGTC 59.904 50.000 0.00 0.00 44.01 3.51
621 622 2.741517 CACACGGATAAATGTGCTGTCA 59.258 45.455 0.00 0.00 39.79 3.58
622 623 3.002791 ACACGGATAAATGTGCTGTCAG 58.997 45.455 0.00 0.00 39.71 3.51
623 624 3.002791 CACGGATAAATGTGCTGTCAGT 58.997 45.455 0.93 0.00 0.00 3.41
624 625 4.180817 CACGGATAAATGTGCTGTCAGTA 58.819 43.478 0.93 0.00 0.00 2.74
625 626 4.268644 CACGGATAAATGTGCTGTCAGTAG 59.731 45.833 0.93 0.00 0.00 2.57
626 627 4.159693 ACGGATAAATGTGCTGTCAGTAGA 59.840 41.667 0.93 0.00 0.00 2.59
627 628 5.163405 ACGGATAAATGTGCTGTCAGTAGAT 60.163 40.000 0.93 0.00 0.00 1.98
628 629 5.403766 CGGATAAATGTGCTGTCAGTAGATC 59.596 44.000 0.99 0.00 0.00 2.75
629 630 5.403766 GGATAAATGTGCTGTCAGTAGATCG 59.596 44.000 0.99 0.00 0.00 3.69
630 631 2.879002 ATGTGCTGTCAGTAGATCGG 57.121 50.000 0.93 0.00 0.00 4.18
631 632 0.173481 TGTGCTGTCAGTAGATCGGC 59.827 55.000 0.93 0.00 0.00 5.54
632 633 0.867753 GTGCTGTCAGTAGATCGGCG 60.868 60.000 0.00 0.00 0.00 6.46
633 634 1.313091 TGCTGTCAGTAGATCGGCGT 61.313 55.000 6.85 0.00 0.00 5.68
634 635 0.867753 GCTGTCAGTAGATCGGCGTG 60.868 60.000 6.85 0.00 0.00 5.34
635 636 0.452184 CTGTCAGTAGATCGGCGTGT 59.548 55.000 6.85 0.00 0.00 4.49
636 637 0.885879 TGTCAGTAGATCGGCGTGTT 59.114 50.000 6.85 0.00 0.00 3.32
637 638 2.086094 TGTCAGTAGATCGGCGTGTTA 58.914 47.619 6.85 0.00 0.00 2.41
638 639 2.096980 TGTCAGTAGATCGGCGTGTTAG 59.903 50.000 6.85 0.00 0.00 2.34
639 640 2.353889 GTCAGTAGATCGGCGTGTTAGA 59.646 50.000 6.85 0.00 0.00 2.10
640 641 2.612672 TCAGTAGATCGGCGTGTTAGAG 59.387 50.000 6.85 0.00 0.00 2.43
641 642 2.355132 CAGTAGATCGGCGTGTTAGAGT 59.645 50.000 6.85 0.00 0.00 3.24
642 643 3.015327 AGTAGATCGGCGTGTTAGAGTT 58.985 45.455 6.85 0.00 0.00 3.01
643 644 2.279582 AGATCGGCGTGTTAGAGTTG 57.720 50.000 6.85 0.00 0.00 3.16
644 645 0.645868 GATCGGCGTGTTAGAGTTGC 59.354 55.000 6.85 0.00 0.00 4.17
645 646 0.246635 ATCGGCGTGTTAGAGTTGCT 59.753 50.000 6.85 0.00 0.00 3.91
646 647 0.388134 TCGGCGTGTTAGAGTTGCTC 60.388 55.000 6.85 0.00 0.00 4.26
647 648 0.388649 CGGCGTGTTAGAGTTGCTCT 60.389 55.000 0.00 4.02 43.83 4.09
648 649 1.135489 CGGCGTGTTAGAGTTGCTCTA 60.135 52.381 0.00 2.07 41.50 2.43
649 650 2.670229 CGGCGTGTTAGAGTTGCTCTAA 60.670 50.000 12.89 12.89 46.70 2.10
656 657 1.926108 AGAGTTGCTCTAACCGGAGT 58.074 50.000 9.46 0.00 39.28 3.85
657 658 1.546476 AGAGTTGCTCTAACCGGAGTG 59.454 52.381 9.46 0.00 39.28 3.51
658 659 0.037232 AGTTGCTCTAACCGGAGTGC 60.037 55.000 9.46 9.55 40.24 4.40
659 660 1.080093 TTGCTCTAACCGGAGTGCG 60.080 57.895 9.46 0.00 38.50 5.34
660 661 2.886124 GCTCTAACCGGAGTGCGC 60.886 66.667 9.46 0.00 35.89 6.09
661 662 2.571757 CTCTAACCGGAGTGCGCA 59.428 61.111 9.46 5.66 0.00 6.09
662 663 1.080093 CTCTAACCGGAGTGCGCAA 60.080 57.895 14.00 0.00 0.00 4.85
663 664 0.669318 CTCTAACCGGAGTGCGCAAA 60.669 55.000 14.00 0.00 0.00 3.68
664 665 0.669318 TCTAACCGGAGTGCGCAAAG 60.669 55.000 14.00 3.36 0.00 2.77
665 666 1.635663 CTAACCGGAGTGCGCAAAGG 61.636 60.000 14.00 15.82 0.00 3.11
676 677 2.558313 GCAAAGGCGCTCACAGAC 59.442 61.111 7.64 0.00 0.00 3.51
677 678 2.856032 CAAAGGCGCTCACAGACG 59.144 61.111 7.64 0.00 0.00 4.18
678 679 2.357517 AAAGGCGCTCACAGACGG 60.358 61.111 7.64 0.00 0.00 4.79
679 680 3.883744 AAAGGCGCTCACAGACGGG 62.884 63.158 7.64 0.00 0.00 5.28
681 682 4.681978 GGCGCTCACAGACGGGTT 62.682 66.667 7.64 0.00 0.00 4.11
682 683 3.414700 GCGCTCACAGACGGGTTG 61.415 66.667 0.00 0.00 0.00 3.77
683 684 2.029073 CGCTCACAGACGGGTTGT 59.971 61.111 0.00 0.00 0.00 3.32
684 685 2.310233 CGCTCACAGACGGGTTGTG 61.310 63.158 9.17 9.17 45.61 3.33
685 686 1.227556 GCTCACAGACGGGTTGTGT 60.228 57.895 13.47 0.00 44.77 3.72
686 687 0.814010 GCTCACAGACGGGTTGTGTT 60.814 55.000 13.47 0.00 44.77 3.32
687 688 1.663695 CTCACAGACGGGTTGTGTTT 58.336 50.000 13.47 0.00 44.77 2.83
688 689 1.330521 CTCACAGACGGGTTGTGTTTG 59.669 52.381 13.47 4.98 44.77 2.93
689 690 0.248458 CACAGACGGGTTGTGTTTGC 60.248 55.000 7.72 0.00 40.73 3.68
690 691 1.010125 CAGACGGGTTGTGTTTGCG 60.010 57.895 0.00 0.00 0.00 4.85
691 692 1.450669 AGACGGGTTGTGTTTGCGT 60.451 52.632 0.00 0.00 0.00 5.24
692 693 0.179078 AGACGGGTTGTGTTTGCGTA 60.179 50.000 0.00 0.00 0.00 4.42
693 694 0.869730 GACGGGTTGTGTTTGCGTAT 59.130 50.000 0.00 0.00 0.00 3.06
694 695 0.589223 ACGGGTTGTGTTTGCGTATG 59.411 50.000 0.00 0.00 0.00 2.39
695 696 0.589223 CGGGTTGTGTTTGCGTATGT 59.411 50.000 0.00 0.00 0.00 2.29
696 697 1.002251 CGGGTTGTGTTTGCGTATGTT 60.002 47.619 0.00 0.00 0.00 2.71
697 698 2.657184 GGGTTGTGTTTGCGTATGTTC 58.343 47.619 0.00 0.00 0.00 3.18
698 699 2.033550 GGGTTGTGTTTGCGTATGTTCA 59.966 45.455 0.00 0.00 0.00 3.18
699 700 3.489398 GGGTTGTGTTTGCGTATGTTCAA 60.489 43.478 0.00 0.00 0.00 2.69
700 701 4.106197 GGTTGTGTTTGCGTATGTTCAAA 58.894 39.130 0.00 0.00 0.00 2.69
701 702 4.206200 GGTTGTGTTTGCGTATGTTCAAAG 59.794 41.667 0.00 0.00 33.43 2.77
702 703 3.367607 TGTGTTTGCGTATGTTCAAAGC 58.632 40.909 0.00 0.00 33.43 3.51
703 704 3.066064 TGTGTTTGCGTATGTTCAAAGCT 59.934 39.130 0.00 0.00 33.43 3.74
704 705 4.273724 TGTGTTTGCGTATGTTCAAAGCTA 59.726 37.500 0.00 0.00 33.43 3.32
705 706 5.209240 GTGTTTGCGTATGTTCAAAGCTAA 58.791 37.500 0.00 0.00 33.43 3.09
753 754 4.166011 CGGTCCGGTCCGTACGAC 62.166 72.222 28.87 12.66 44.77 4.34
765 766 0.782384 CGTACGACAAAGCCAGTGAC 59.218 55.000 10.44 0.00 0.00 3.67
796 797 5.669447 AGGAAGATTATCATCAGTCCAACCT 59.331 40.000 10.59 0.00 37.93 3.50
835 836 1.203994 CATCTAAACCACCCGACGACT 59.796 52.381 0.00 0.00 0.00 4.18
853 857 1.118838 CTTGCTCAAACCCAAACCCA 58.881 50.000 0.00 0.00 0.00 4.51
854 858 1.484240 CTTGCTCAAACCCAAACCCAA 59.516 47.619 0.00 0.00 0.00 4.12
855 859 1.573108 TGCTCAAACCCAAACCCAAA 58.427 45.000 0.00 0.00 0.00 3.28
856 860 1.208293 TGCTCAAACCCAAACCCAAAC 59.792 47.619 0.00 0.00 0.00 2.93
857 861 1.474320 GCTCAAACCCAAACCCAAACC 60.474 52.381 0.00 0.00 0.00 3.27
969 990 0.758685 CCTCCTCCGATCCAGAAGCT 60.759 60.000 0.00 0.00 0.00 3.74
976 997 1.227497 GATCCAGAAGCTCAGGCGG 60.227 63.158 0.00 0.00 44.37 6.13
977 998 3.397613 ATCCAGAAGCTCAGGCGGC 62.398 63.158 0.00 0.00 44.37 6.53
2184 2241 2.615912 GGATTTCATCAAGGAAGAGGCG 59.384 50.000 0.00 0.00 0.00 5.52
3169 3357 5.047092 ACCTTCTACCTTGCAATTCAATTGG 60.047 40.000 12.14 0.00 40.57 3.16
3176 3364 4.218852 CCTTGCAATTCAATTGGGCATTTT 59.781 37.500 12.14 0.00 40.57 1.82
3184 3372 2.931325 CAATTGGGCATTTTGGATGACG 59.069 45.455 0.00 0.00 0.00 4.35
3379 3568 3.619233 AACTGTATGTCGCAAAACACC 57.381 42.857 0.00 0.00 30.55 4.16
3385 3574 1.968704 TGTCGCAAAACACCATACCA 58.031 45.000 0.00 0.00 0.00 3.25
3466 3655 5.085636 TCAAAGTTTGACCAAATACGACG 57.914 39.130 14.35 0.00 34.08 5.12
3474 3663 1.817941 CAAATACGACGGGCCCCAG 60.818 63.158 18.66 10.48 0.00 4.45
3505 3694 3.328382 TGGAGGAAGTACATTGTTCCG 57.672 47.619 0.00 0.00 46.01 4.30
3715 3904 1.028868 GCATCTCCAACTGGACTGGC 61.029 60.000 0.00 0.00 39.78 4.85
3732 3921 3.439440 GCCTAATTTGGGCCCCTAG 57.561 57.895 22.27 14.21 43.49 3.02
3738 3927 1.912862 ATTTGGGCCCCTAGACATCT 58.087 50.000 22.27 0.00 0.00 2.90
3807 3997 4.324331 GGTGGGCATAGAAACTTAGGAACT 60.324 45.833 0.00 0.00 46.37 3.01
3820 4010 4.529377 ACTTAGGAACTGAATACCGAACCA 59.471 41.667 0.00 0.00 41.52 3.67
3825 4015 4.517832 GGAACTGAATACCGAACCAAAACT 59.482 41.667 0.00 0.00 0.00 2.66
3828 4019 4.885325 ACTGAATACCGAACCAAAACTGTT 59.115 37.500 0.00 0.00 0.00 3.16
3832 4023 3.286329 ACCGAACCAAAACTGTTACCT 57.714 42.857 0.00 0.00 0.00 3.08
3840 4031 6.704289 ACCAAAACTGTTACCTAAAAGACC 57.296 37.500 0.00 0.00 0.00 3.85
3846 4037 6.796705 ACTGTTACCTAAAAGACCGAAATG 57.203 37.500 0.00 0.00 0.00 2.32
3847 4038 6.293698 ACTGTTACCTAAAAGACCGAAATGT 58.706 36.000 0.00 0.00 0.00 2.71
3880 4071 6.401047 TCCCTAGTACAGATAAATTCGGTG 57.599 41.667 0.00 0.00 34.42 4.94
3888 4079 6.877611 ACAGATAAATTCGGTGTTCACTTT 57.122 33.333 2.98 0.00 31.05 2.66
3896 4087 4.126208 TCGGTGTTCACTTTCACTAACA 57.874 40.909 2.98 0.00 35.26 2.41
3935 4126 2.231964 TCGGTGTTACATCGGTTAAGCT 59.768 45.455 18.20 0.00 38.63 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.310538 CATTGGGAATGTCTTAGGGCC 58.689 52.381 0.00 0.00 34.18 5.80
39 40 9.216117 GGCGGTAGAGATTAATTTACATATGTT 57.784 33.333 14.77 0.00 0.00 2.71
40 41 8.372459 TGGCGGTAGAGATTAATTTACATATGT 58.628 33.333 13.93 13.93 0.00 2.29
41 42 8.771920 TGGCGGTAGAGATTAATTTACATATG 57.228 34.615 0.00 0.00 0.00 1.78
44 45 9.216117 GTTATGGCGGTAGAGATTAATTTACAT 57.784 33.333 0.00 0.00 0.00 2.29
45 46 7.658575 GGTTATGGCGGTAGAGATTAATTTACA 59.341 37.037 0.00 0.00 0.00 2.41
46 47 7.876582 AGGTTATGGCGGTAGAGATTAATTTAC 59.123 37.037 0.00 0.00 0.00 2.01
47 48 7.970102 AGGTTATGGCGGTAGAGATTAATTTA 58.030 34.615 0.00 0.00 0.00 1.40
48 49 6.838382 AGGTTATGGCGGTAGAGATTAATTT 58.162 36.000 0.00 0.00 0.00 1.82
49 50 6.435292 AGGTTATGGCGGTAGAGATTAATT 57.565 37.500 0.00 0.00 0.00 1.40
50 51 7.549147 TTAGGTTATGGCGGTAGAGATTAAT 57.451 36.000 0.00 0.00 0.00 1.40
51 52 6.982160 TTAGGTTATGGCGGTAGAGATTAA 57.018 37.500 0.00 0.00 0.00 1.40
52 53 6.515531 CGTTTAGGTTATGGCGGTAGAGATTA 60.516 42.308 0.00 0.00 0.00 1.75
53 54 5.608449 GTTTAGGTTATGGCGGTAGAGATT 58.392 41.667 0.00 0.00 0.00 2.40
54 55 4.261909 CGTTTAGGTTATGGCGGTAGAGAT 60.262 45.833 0.00 0.00 0.00 2.75
55 56 3.067180 CGTTTAGGTTATGGCGGTAGAGA 59.933 47.826 0.00 0.00 0.00 3.10
56 57 3.378339 CGTTTAGGTTATGGCGGTAGAG 58.622 50.000 0.00 0.00 0.00 2.43
57 58 2.101249 CCGTTTAGGTTATGGCGGTAGA 59.899 50.000 0.00 0.00 35.11 2.59
58 59 2.476821 CCGTTTAGGTTATGGCGGTAG 58.523 52.381 0.00 0.00 35.11 3.18
59 60 1.138661 CCCGTTTAGGTTATGGCGGTA 59.861 52.381 0.00 0.00 38.74 4.02
60 61 0.107557 CCCGTTTAGGTTATGGCGGT 60.108 55.000 0.00 0.00 38.74 5.68
61 62 0.107557 ACCCGTTTAGGTTATGGCGG 60.108 55.000 0.00 0.00 36.44 6.13
62 63 3.464207 ACCCGTTTAGGTTATGGCG 57.536 52.632 0.00 0.00 36.44 5.69
68 69 8.606177 ATGTGTACATTTGAACCCGTTTAGGTT 61.606 37.037 0.00 0.00 42.60 3.50
69 70 4.516321 GTGTACATTTGAACCCGTTTAGGT 59.484 41.667 0.00 0.00 44.00 3.08
70 71 4.515944 TGTGTACATTTGAACCCGTTTAGG 59.484 41.667 0.00 0.00 40.63 2.69
71 72 5.676532 TGTGTACATTTGAACCCGTTTAG 57.323 39.130 0.00 0.00 0.00 1.85
72 73 5.998981 AGATGTGTACATTTGAACCCGTTTA 59.001 36.000 0.00 0.00 36.57 2.01
73 74 4.825085 AGATGTGTACATTTGAACCCGTTT 59.175 37.500 0.00 0.00 36.57 3.60
74 75 4.394729 AGATGTGTACATTTGAACCCGTT 58.605 39.130 0.00 0.00 36.57 4.44
75 76 4.015872 AGATGTGTACATTTGAACCCGT 57.984 40.909 0.00 0.00 36.57 5.28
76 77 5.371115 AAAGATGTGTACATTTGAACCCG 57.629 39.130 0.00 0.00 36.57 5.28
77 78 5.048991 ACGAAAGATGTGTACATTTGAACCC 60.049 40.000 0.00 0.00 36.57 4.11
78 79 5.851177 CACGAAAGATGTGTACATTTGAACC 59.149 40.000 0.00 0.00 36.57 3.62
79 80 6.895209 CACGAAAGATGTGTACATTTGAAC 57.105 37.500 0.00 0.00 36.57 3.18
90 91 1.526887 AGCACGAACACGAAAGATGTG 59.473 47.619 0.00 0.00 42.99 3.21
91 92 1.792949 GAGCACGAACACGAAAGATGT 59.207 47.619 0.00 0.00 0.00 3.06
92 93 2.061773 AGAGCACGAACACGAAAGATG 58.938 47.619 0.00 0.00 0.00 2.90
93 94 2.061773 CAGAGCACGAACACGAAAGAT 58.938 47.619 0.00 0.00 0.00 2.40
94 95 1.202371 ACAGAGCACGAACACGAAAGA 60.202 47.619 0.00 0.00 0.00 2.52
95 96 1.209128 ACAGAGCACGAACACGAAAG 58.791 50.000 0.00 0.00 0.00 2.62
96 97 1.326245 CAACAGAGCACGAACACGAAA 59.674 47.619 0.00 0.00 0.00 3.46
97 98 0.927537 CAACAGAGCACGAACACGAA 59.072 50.000 0.00 0.00 0.00 3.85
98 99 0.101579 TCAACAGAGCACGAACACGA 59.898 50.000 0.00 0.00 0.00 4.35
99 100 0.504384 CTCAACAGAGCACGAACACG 59.496 55.000 0.00 0.00 0.00 4.49
100 101 1.789464 CTCTCAACAGAGCACGAACAC 59.211 52.381 0.00 0.00 40.00 3.32
101 102 1.681264 TCTCTCAACAGAGCACGAACA 59.319 47.619 0.00 0.00 45.46 3.18
102 103 2.423926 TCTCTCAACAGAGCACGAAC 57.576 50.000 0.00 0.00 45.46 3.95
103 104 2.623416 TCTTCTCTCAACAGAGCACGAA 59.377 45.455 0.00 0.00 45.46 3.85
104 105 2.230660 TCTTCTCTCAACAGAGCACGA 58.769 47.619 0.00 0.00 45.46 4.35
105 106 2.713895 TCTTCTCTCAACAGAGCACG 57.286 50.000 0.00 0.00 45.46 5.34
106 107 4.082300 TCTGATCTTCTCTCAACAGAGCAC 60.082 45.833 0.00 0.00 45.46 4.40
107 108 4.085009 TCTGATCTTCTCTCAACAGAGCA 58.915 43.478 0.00 0.00 45.46 4.26
108 109 4.717233 TCTGATCTTCTCTCAACAGAGC 57.283 45.455 0.00 0.00 45.46 4.09
110 111 5.477510 GCTTTCTGATCTTCTCTCAACAGA 58.522 41.667 0.00 0.00 33.53 3.41
111 112 4.326817 CGCTTTCTGATCTTCTCTCAACAG 59.673 45.833 0.00 0.00 0.00 3.16
112 113 4.021981 TCGCTTTCTGATCTTCTCTCAACA 60.022 41.667 0.00 0.00 0.00 3.33
113 114 4.489810 TCGCTTTCTGATCTTCTCTCAAC 58.510 43.478 0.00 0.00 0.00 3.18
114 115 4.790765 TCGCTTTCTGATCTTCTCTCAA 57.209 40.909 0.00 0.00 0.00 3.02
115 116 4.400567 TCATCGCTTTCTGATCTTCTCTCA 59.599 41.667 0.00 0.00 0.00 3.27
116 117 4.930963 TCATCGCTTTCTGATCTTCTCTC 58.069 43.478 0.00 0.00 0.00 3.20
117 118 4.402155 ACTCATCGCTTTCTGATCTTCTCT 59.598 41.667 0.00 0.00 0.00 3.10
118 119 4.503734 CACTCATCGCTTTCTGATCTTCTC 59.496 45.833 0.00 0.00 0.00 2.87
119 120 4.081752 ACACTCATCGCTTTCTGATCTTCT 60.082 41.667 0.00 0.00 0.00 2.85
120 121 4.180057 ACACTCATCGCTTTCTGATCTTC 58.820 43.478 0.00 0.00 0.00 2.87
121 122 4.180057 GACACTCATCGCTTTCTGATCTT 58.820 43.478 0.00 0.00 0.00 2.40
122 123 3.733380 CGACACTCATCGCTTTCTGATCT 60.733 47.826 0.00 0.00 34.90 2.75
123 124 2.533535 CGACACTCATCGCTTTCTGATC 59.466 50.000 0.00 0.00 34.90 2.92
124 125 2.534298 CGACACTCATCGCTTTCTGAT 58.466 47.619 0.00 0.00 34.90 2.90
125 126 1.982612 CGACACTCATCGCTTTCTGA 58.017 50.000 0.00 0.00 34.90 3.27
133 134 3.340337 TCATCTAAGCGACACTCATCG 57.660 47.619 0.00 0.00 45.09 3.84
134 135 4.864633 TGATCATCTAAGCGACACTCATC 58.135 43.478 0.00 0.00 0.00 2.92
135 136 4.261952 CCTGATCATCTAAGCGACACTCAT 60.262 45.833 0.00 0.00 0.00 2.90
136 137 3.067320 CCTGATCATCTAAGCGACACTCA 59.933 47.826 0.00 0.00 0.00 3.41
137 138 3.067461 ACCTGATCATCTAAGCGACACTC 59.933 47.826 0.00 0.00 0.00 3.51
138 139 3.027412 ACCTGATCATCTAAGCGACACT 58.973 45.455 0.00 0.00 0.00 3.55
139 140 3.444703 ACCTGATCATCTAAGCGACAC 57.555 47.619 0.00 0.00 0.00 3.67
140 141 4.471904 AAACCTGATCATCTAAGCGACA 57.528 40.909 0.00 0.00 0.00 4.35
141 142 5.803020 AAAAACCTGATCATCTAAGCGAC 57.197 39.130 0.00 0.00 0.00 5.19
174 175 6.402456 ACTGGAACCCTTAATCGTAGATAC 57.598 41.667 0.00 0.00 45.12 2.24
175 176 7.124599 TGAAACTGGAACCCTTAATCGTAGATA 59.875 37.037 0.00 0.00 45.12 1.98
176 177 5.952347 AACTGGAACCCTTAATCGTAGAT 57.048 39.130 0.00 0.00 45.12 1.98
177 178 5.246656 TGAAACTGGAACCCTTAATCGTAGA 59.753 40.000 0.00 0.00 45.75 2.59
178 179 5.484715 TGAAACTGGAACCCTTAATCGTAG 58.515 41.667 0.00 0.00 0.00 3.51
179 180 5.484715 CTGAAACTGGAACCCTTAATCGTA 58.515 41.667 0.00 0.00 0.00 3.43
180 181 4.324267 CTGAAACTGGAACCCTTAATCGT 58.676 43.478 0.00 0.00 0.00 3.73
181 182 3.689649 CCTGAAACTGGAACCCTTAATCG 59.310 47.826 0.00 0.00 0.00 3.34
182 183 4.017126 CCCTGAAACTGGAACCCTTAATC 58.983 47.826 0.00 0.00 0.00 1.75
183 184 3.401342 ACCCTGAAACTGGAACCCTTAAT 59.599 43.478 0.00 0.00 0.00 1.40
184 185 2.787035 ACCCTGAAACTGGAACCCTTAA 59.213 45.455 0.00 0.00 0.00 1.85
185 186 2.107552 CACCCTGAAACTGGAACCCTTA 59.892 50.000 0.00 0.00 0.00 2.69
186 187 1.133482 CACCCTGAAACTGGAACCCTT 60.133 52.381 0.00 0.00 0.00 3.95
187 188 0.478507 CACCCTGAAACTGGAACCCT 59.521 55.000 0.00 0.00 0.00 4.34
188 189 0.476771 TCACCCTGAAACTGGAACCC 59.523 55.000 0.00 0.00 0.00 4.11
189 190 1.420138 TCTCACCCTGAAACTGGAACC 59.580 52.381 0.00 0.00 0.00 3.62
190 191 2.104963 ACTCTCACCCTGAAACTGGAAC 59.895 50.000 0.00 0.00 0.00 3.62
191 192 2.104792 CACTCTCACCCTGAAACTGGAA 59.895 50.000 0.00 0.00 0.00 3.53
192 193 1.694150 CACTCTCACCCTGAAACTGGA 59.306 52.381 0.00 0.00 0.00 3.86
193 194 1.417890 ACACTCTCACCCTGAAACTGG 59.582 52.381 0.00 0.00 0.00 4.00
194 195 2.874701 CAACACTCTCACCCTGAAACTG 59.125 50.000 0.00 0.00 0.00 3.16
195 196 2.505819 ACAACACTCTCACCCTGAAACT 59.494 45.455 0.00 0.00 0.00 2.66
196 197 2.614057 CACAACACTCTCACCCTGAAAC 59.386 50.000 0.00 0.00 0.00 2.78
197 198 2.917933 CACAACACTCTCACCCTGAAA 58.082 47.619 0.00 0.00 0.00 2.69
198 199 1.475034 GCACAACACTCTCACCCTGAA 60.475 52.381 0.00 0.00 0.00 3.02
199 200 0.106708 GCACAACACTCTCACCCTGA 59.893 55.000 0.00 0.00 0.00 3.86
200 201 0.886490 GGCACAACACTCTCACCCTG 60.886 60.000 0.00 0.00 0.00 4.45
201 202 1.056700 AGGCACAACACTCTCACCCT 61.057 55.000 0.00 0.00 0.00 4.34
202 203 0.886490 CAGGCACAACACTCTCACCC 60.886 60.000 0.00 0.00 0.00 4.61
203 204 0.106708 TCAGGCACAACACTCTCACC 59.893 55.000 0.00 0.00 0.00 4.02
204 205 1.202580 ACTCAGGCACAACACTCTCAC 60.203 52.381 0.00 0.00 0.00 3.51
205 206 1.123077 ACTCAGGCACAACACTCTCA 58.877 50.000 0.00 0.00 0.00 3.27
206 207 3.257393 CATACTCAGGCACAACACTCTC 58.743 50.000 0.00 0.00 0.00 3.20
207 208 2.027745 CCATACTCAGGCACAACACTCT 60.028 50.000 0.00 0.00 0.00 3.24
208 209 2.028112 TCCATACTCAGGCACAACACTC 60.028 50.000 0.00 0.00 0.00 3.51
209 210 1.977854 TCCATACTCAGGCACAACACT 59.022 47.619 0.00 0.00 0.00 3.55
210 211 2.472695 TCCATACTCAGGCACAACAC 57.527 50.000 0.00 0.00 0.00 3.32
211 212 2.637382 TCTTCCATACTCAGGCACAACA 59.363 45.455 0.00 0.00 0.00 3.33
212 213 3.265791 CTCTTCCATACTCAGGCACAAC 58.734 50.000 0.00 0.00 0.00 3.32
213 214 2.355108 GCTCTTCCATACTCAGGCACAA 60.355 50.000 0.00 0.00 0.00 3.33
214 215 1.208052 GCTCTTCCATACTCAGGCACA 59.792 52.381 0.00 0.00 0.00 4.57
215 216 1.804372 CGCTCTTCCATACTCAGGCAC 60.804 57.143 0.00 0.00 0.00 5.01
216 217 0.461548 CGCTCTTCCATACTCAGGCA 59.538 55.000 0.00 0.00 0.00 4.75
217 218 0.249657 CCGCTCTTCCATACTCAGGC 60.250 60.000 0.00 0.00 0.00 4.85
218 219 0.249657 GCCGCTCTTCCATACTCAGG 60.250 60.000 0.00 0.00 0.00 3.86
219 220 0.461548 TGCCGCTCTTCCATACTCAG 59.538 55.000 0.00 0.00 0.00 3.35
220 221 0.901827 TTGCCGCTCTTCCATACTCA 59.098 50.000 0.00 0.00 0.00 3.41
221 222 1.291132 GTTGCCGCTCTTCCATACTC 58.709 55.000 0.00 0.00 0.00 2.59
222 223 0.460284 CGTTGCCGCTCTTCCATACT 60.460 55.000 0.00 0.00 0.00 2.12
223 224 0.739813 ACGTTGCCGCTCTTCCATAC 60.740 55.000 0.00 0.00 37.70 2.39
224 225 0.459585 GACGTTGCCGCTCTTCCATA 60.460 55.000 0.00 0.00 37.70 2.74
225 226 1.741770 GACGTTGCCGCTCTTCCAT 60.742 57.895 0.00 0.00 37.70 3.41
226 227 2.357034 GACGTTGCCGCTCTTCCA 60.357 61.111 0.00 0.00 37.70 3.53
227 228 2.048127 AGACGTTGCCGCTCTTCC 60.048 61.111 0.00 0.00 37.70 3.46
228 229 0.944311 TTCAGACGTTGCCGCTCTTC 60.944 55.000 0.00 0.00 37.70 2.87
229 230 0.320771 ATTCAGACGTTGCCGCTCTT 60.321 50.000 0.00 0.00 37.70 2.85
230 231 0.530744 TATTCAGACGTTGCCGCTCT 59.469 50.000 0.00 0.00 37.70 4.09
231 232 0.924090 CTATTCAGACGTTGCCGCTC 59.076 55.000 0.00 0.00 37.70 5.03
232 233 0.246635 ACTATTCAGACGTTGCCGCT 59.753 50.000 0.00 0.00 37.70 5.52
233 234 1.060698 GAACTATTCAGACGTTGCCGC 59.939 52.381 0.00 0.00 37.70 6.53
234 235 2.092211 GTGAACTATTCAGACGTTGCCG 59.908 50.000 0.00 0.00 41.01 5.69
235 236 3.064207 TGTGAACTATTCAGACGTTGCC 58.936 45.455 0.00 0.00 41.01 4.52
236 237 4.928661 ATGTGAACTATTCAGACGTTGC 57.071 40.909 0.00 0.00 41.01 4.17
237 238 9.478019 GAAATTATGTGAACTATTCAGACGTTG 57.522 33.333 0.00 0.00 41.01 4.10
238 239 9.214957 TGAAATTATGTGAACTATTCAGACGTT 57.785 29.630 0.00 0.00 41.01 3.99
239 240 8.771920 TGAAATTATGTGAACTATTCAGACGT 57.228 30.769 0.00 0.00 41.01 4.34
240 241 9.855361 GATGAAATTATGTGAACTATTCAGACG 57.145 33.333 0.00 0.00 41.01 4.18
261 262 5.096849 CACAATCACGCATTTCATGATGAA 58.903 37.500 3.29 3.29 33.37 2.57
262 263 4.395542 TCACAATCACGCATTTCATGATGA 59.604 37.500 0.00 0.00 33.37 2.92
263 264 4.664188 TCACAATCACGCATTTCATGATG 58.336 39.130 0.00 0.00 33.37 3.07
264 265 4.968812 TCACAATCACGCATTTCATGAT 57.031 36.364 0.00 0.00 34.52 2.45
265 266 4.762956 TTCACAATCACGCATTTCATGA 57.237 36.364 0.00 0.00 0.00 3.07
266 267 4.919168 AGTTTCACAATCACGCATTTCATG 59.081 37.500 0.00 0.00 0.00 3.07
267 268 5.125100 AGTTTCACAATCACGCATTTCAT 57.875 34.783 0.00 0.00 0.00 2.57
268 269 4.036144 TGAGTTTCACAATCACGCATTTCA 59.964 37.500 0.00 0.00 0.00 2.69
269 270 4.379793 GTGAGTTTCACAATCACGCATTTC 59.620 41.667 4.42 0.00 46.22 2.17
270 271 4.290155 GTGAGTTTCACAATCACGCATTT 58.710 39.130 4.42 0.00 46.22 2.32
271 272 3.888934 GTGAGTTTCACAATCACGCATT 58.111 40.909 4.42 0.00 46.22 3.56
272 273 3.542712 GTGAGTTTCACAATCACGCAT 57.457 42.857 4.42 0.00 46.22 4.73
283 284 9.230122 TGATTTTATAGCTTCATGTGAGTTTCA 57.770 29.630 0.00 0.00 0.00 2.69
288 289 9.459640 CCAAATGATTTTATAGCTTCATGTGAG 57.540 33.333 13.38 3.17 36.38 3.51
289 290 8.970020 ACCAAATGATTTTATAGCTTCATGTGA 58.030 29.630 13.38 0.00 36.38 3.58
290 291 9.241317 GACCAAATGATTTTATAGCTTCATGTG 57.759 33.333 6.92 6.92 34.82 3.21
291 292 8.131100 CGACCAAATGATTTTATAGCTTCATGT 58.869 33.333 0.00 0.00 0.00 3.21
292 293 8.344831 TCGACCAAATGATTTTATAGCTTCATG 58.655 33.333 0.00 0.00 0.00 3.07
293 294 8.450578 TCGACCAAATGATTTTATAGCTTCAT 57.549 30.769 0.00 0.00 0.00 2.57
294 295 7.552687 ACTCGACCAAATGATTTTATAGCTTCA 59.447 33.333 0.00 0.00 0.00 3.02
295 296 7.920738 ACTCGACCAAATGATTTTATAGCTTC 58.079 34.615 0.00 0.00 0.00 3.86
296 297 7.865706 ACTCGACCAAATGATTTTATAGCTT 57.134 32.000 0.00 0.00 0.00 3.74
306 307 9.862371 GATCTTACATATACTCGACCAAATGAT 57.138 33.333 0.00 0.00 0.00 2.45
307 308 8.856103 TGATCTTACATATACTCGACCAAATGA 58.144 33.333 0.00 0.00 0.00 2.57
308 309 9.645059 ATGATCTTACATATACTCGACCAAATG 57.355 33.333 0.00 0.00 0.00 2.32
309 310 9.645059 CATGATCTTACATATACTCGACCAAAT 57.355 33.333 0.00 0.00 0.00 2.32
310 311 8.638873 ACATGATCTTACATATACTCGACCAAA 58.361 33.333 0.00 0.00 0.00 3.28
311 312 8.178313 ACATGATCTTACATATACTCGACCAA 57.822 34.615 0.00 0.00 0.00 3.67
312 313 7.761038 ACATGATCTTACATATACTCGACCA 57.239 36.000 0.00 0.00 0.00 4.02
313 314 7.542477 CCAACATGATCTTACATATACTCGACC 59.458 40.741 0.00 0.00 0.00 4.79
314 315 8.082852 ACCAACATGATCTTACATATACTCGAC 58.917 37.037 0.00 0.00 0.00 4.20
315 316 8.178313 ACCAACATGATCTTACATATACTCGA 57.822 34.615 0.00 0.00 0.00 4.04
316 317 9.908152 TTACCAACATGATCTTACATATACTCG 57.092 33.333 0.00 0.00 0.00 4.18
318 319 9.998106 GGTTACCAACATGATCTTACATATACT 57.002 33.333 0.00 0.00 0.00 2.12
319 320 9.772973 TGGTTACCAACATGATCTTACATATAC 57.227 33.333 0.00 0.00 0.00 1.47
321 322 9.866655 ATTGGTTACCAACATGATCTTACATAT 57.133 29.630 19.93 0.00 46.95 1.78
323 324 9.693739 TTATTGGTTACCAACATGATCTTACAT 57.306 29.630 19.93 1.13 46.95 2.29
324 325 9.521841 TTTATTGGTTACCAACATGATCTTACA 57.478 29.630 19.93 0.00 46.95 2.41
327 328 9.034800 ACATTTATTGGTTACCAACATGATCTT 57.965 29.630 26.46 11.88 46.95 2.40
328 329 8.593945 ACATTTATTGGTTACCAACATGATCT 57.406 30.769 26.46 12.46 46.95 2.75
331 332 8.908903 GGATACATTTATTGGTTACCAACATGA 58.091 33.333 26.46 16.38 46.95 3.07
332 333 8.912988 AGGATACATTTATTGGTTACCAACATG 58.087 33.333 19.93 21.02 43.30 3.21
333 334 9.487442 AAGGATACATTTATTGGTTACCAACAT 57.513 29.630 19.93 7.23 43.30 2.71
334 335 8.887264 AAGGATACATTTATTGGTTACCAACA 57.113 30.769 19.93 4.63 43.30 3.33
348 349 9.791801 ACAAAGCCAAATAAAAAGGATACATTT 57.208 25.926 0.00 0.00 39.60 2.32
354 355 9.062524 GGTTTTACAAAGCCAAATAAAAAGGAT 57.937 29.630 3.01 0.00 38.91 3.24
355 356 8.047310 TGGTTTTACAAAGCCAAATAAAAAGGA 58.953 29.630 7.70 0.00 44.71 3.36
356 357 8.214721 TGGTTTTACAAAGCCAAATAAAAAGG 57.785 30.769 7.70 0.00 44.71 3.11
367 368 4.037446 TGTCTCACATGGTTTTACAAAGCC 59.963 41.667 0.00 0.97 39.45 4.35
368 369 5.181690 TGTCTCACATGGTTTTACAAAGC 57.818 39.130 0.00 0.00 0.00 3.51
369 370 8.647143 AAATTGTCTCACATGGTTTTACAAAG 57.353 30.769 0.00 0.00 0.00 2.77
382 383 9.134734 GCCGAATAAAAATTAAATTGTCTCACA 57.865 29.630 0.00 0.00 0.00 3.58
383 384 9.353999 AGCCGAATAAAAATTAAATTGTCTCAC 57.646 29.630 0.00 0.00 0.00 3.51
384 385 9.921637 AAGCCGAATAAAAATTAAATTGTCTCA 57.078 25.926 0.00 0.00 0.00 3.27
386 387 9.705290 ACAAGCCGAATAAAAATTAAATTGTCT 57.295 25.926 0.00 0.00 0.00 3.41
397 398 9.968870 AACATAGTTTTACAAGCCGAATAAAAA 57.031 25.926 0.00 0.00 31.47 1.94
398 399 9.968870 AAACATAGTTTTACAAGCCGAATAAAA 57.031 25.926 0.00 0.00 0.00 1.52
399 400 9.968870 AAAACATAGTTTTACAAGCCGAATAAA 57.031 25.926 6.11 0.00 0.00 1.40
403 404 9.968870 AAATAAAACATAGTTTTACAAGCCGAA 57.031 25.926 14.99 0.00 0.00 4.30
404 405 9.400638 CAAATAAAACATAGTTTTACAAGCCGA 57.599 29.630 14.99 0.00 0.00 5.54
405 406 8.643752 CCAAATAAAACATAGTTTTACAAGCCG 58.356 33.333 14.99 4.24 0.00 5.52
406 407 9.483916 ACCAAATAAAACATAGTTTTACAAGCC 57.516 29.630 14.99 0.00 0.00 4.35
419 420 9.423061 GCATAGTTTCAGAACCAAATAAAACAT 57.577 29.630 0.00 0.00 36.39 2.71
420 421 8.637986 AGCATAGTTTCAGAACCAAATAAAACA 58.362 29.630 0.00 0.00 36.39 2.83
421 422 9.476202 AAGCATAGTTTCAGAACCAAATAAAAC 57.524 29.630 0.00 0.00 36.39 2.43
468 469 9.123902 ACACTCTGCATATTTCATAAGCAAATA 57.876 29.630 0.00 0.00 38.75 1.40
469 470 8.004087 ACACTCTGCATATTTCATAAGCAAAT 57.996 30.769 0.00 0.00 38.75 2.32
470 471 7.395190 ACACTCTGCATATTTCATAAGCAAA 57.605 32.000 0.00 0.00 38.75 3.68
471 472 7.121020 TGAACACTCTGCATATTTCATAAGCAA 59.879 33.333 0.00 0.00 38.75 3.91
472 473 6.598850 TGAACACTCTGCATATTTCATAAGCA 59.401 34.615 0.00 0.00 37.14 3.91
473 474 7.019774 TGAACACTCTGCATATTTCATAAGC 57.980 36.000 0.00 0.00 0.00 3.09
474 475 9.447040 CAATGAACACTCTGCATATTTCATAAG 57.553 33.333 8.65 3.78 33.58 1.73
475 476 9.176460 TCAATGAACACTCTGCATATTTCATAA 57.824 29.630 8.65 1.40 33.58 1.90
476 477 8.735692 TCAATGAACACTCTGCATATTTCATA 57.264 30.769 8.65 0.00 33.58 2.15
477 478 7.634671 TCAATGAACACTCTGCATATTTCAT 57.365 32.000 0.00 0.00 35.67 2.57
478 479 7.451501 TTCAATGAACACTCTGCATATTTCA 57.548 32.000 0.00 0.00 0.00 2.69
479 480 8.804743 CATTTCAATGAACACTCTGCATATTTC 58.195 33.333 0.00 0.00 38.70 2.17
480 481 8.525316 TCATTTCAATGAACACTCTGCATATTT 58.475 29.630 0.00 0.00 42.11 1.40
481 482 8.058667 TCATTTCAATGAACACTCTGCATATT 57.941 30.769 0.00 0.00 42.11 1.28
482 483 7.634671 TCATTTCAATGAACACTCTGCATAT 57.365 32.000 0.00 0.00 42.11 1.78
484 485 5.970317 TCATTTCAATGAACACTCTGCAT 57.030 34.783 0.00 0.00 42.11 3.96
495 496 3.760151 CTGGCTGGTCTTCATTTCAATGA 59.240 43.478 0.00 0.00 43.28 2.57
496 497 3.508793 ACTGGCTGGTCTTCATTTCAATG 59.491 43.478 0.00 0.00 37.75 2.82
497 498 3.760684 GACTGGCTGGTCTTCATTTCAAT 59.239 43.478 0.00 0.00 33.81 2.57
498 499 3.149196 GACTGGCTGGTCTTCATTTCAA 58.851 45.455 0.00 0.00 33.81 2.69
499 500 2.106338 TGACTGGCTGGTCTTCATTTCA 59.894 45.455 11.15 0.00 37.16 2.69
500 501 2.485814 GTGACTGGCTGGTCTTCATTTC 59.514 50.000 11.15 0.00 37.16 2.17
501 502 2.508526 GTGACTGGCTGGTCTTCATTT 58.491 47.619 11.15 0.00 37.16 2.32
502 503 1.609061 CGTGACTGGCTGGTCTTCATT 60.609 52.381 11.15 0.00 37.16 2.57
503 504 0.036952 CGTGACTGGCTGGTCTTCAT 60.037 55.000 11.15 0.00 37.16 2.57
504 505 1.367471 CGTGACTGGCTGGTCTTCA 59.633 57.895 11.15 0.00 37.16 3.02
505 506 2.029844 GCGTGACTGGCTGGTCTTC 61.030 63.158 11.15 5.40 37.16 2.87
506 507 2.031163 GCGTGACTGGCTGGTCTT 59.969 61.111 11.15 0.00 37.16 3.01
507 508 4.363990 CGCGTGACTGGCTGGTCT 62.364 66.667 0.00 0.00 37.16 3.85
511 512 3.583276 TTACCCGCGTGACTGGCTG 62.583 63.158 4.92 0.00 0.00 4.85
512 513 2.180159 ATTTACCCGCGTGACTGGCT 62.180 55.000 4.92 0.00 0.00 4.75
513 514 0.460635 TATTTACCCGCGTGACTGGC 60.461 55.000 4.92 0.00 0.00 4.85
514 515 1.864711 CATATTTACCCGCGTGACTGG 59.135 52.381 4.92 0.00 0.00 4.00
515 516 1.864711 CCATATTTACCCGCGTGACTG 59.135 52.381 4.92 0.00 0.00 3.51
516 517 1.202604 CCCATATTTACCCGCGTGACT 60.203 52.381 4.92 0.00 0.00 3.41
517 518 1.223187 CCCATATTTACCCGCGTGAC 58.777 55.000 4.92 0.00 0.00 3.67
518 519 0.831966 ACCCATATTTACCCGCGTGA 59.168 50.000 4.92 0.00 0.00 4.35
519 520 1.223187 GACCCATATTTACCCGCGTG 58.777 55.000 4.92 0.00 0.00 5.34
520 521 0.831966 TGACCCATATTTACCCGCGT 59.168 50.000 4.92 0.00 0.00 6.01
521 522 1.508632 CTGACCCATATTTACCCGCG 58.491 55.000 0.00 0.00 0.00 6.46
522 523 1.235724 GCTGACCCATATTTACCCGC 58.764 55.000 0.00 0.00 0.00 6.13
523 524 1.508632 CGCTGACCCATATTTACCCG 58.491 55.000 0.00 0.00 0.00 5.28
524 525 1.235724 GCGCTGACCCATATTTACCC 58.764 55.000 0.00 0.00 0.00 3.69
525 526 0.865769 CGCGCTGACCCATATTTACC 59.134 55.000 5.56 0.00 0.00 2.85
526 527 1.578583 ACGCGCTGACCCATATTTAC 58.421 50.000 5.73 0.00 0.00 2.01
527 528 1.937223 CAACGCGCTGACCCATATTTA 59.063 47.619 5.73 0.00 0.00 1.40
528 529 0.732571 CAACGCGCTGACCCATATTT 59.267 50.000 5.73 0.00 0.00 1.40
529 530 0.107897 TCAACGCGCTGACCCATATT 60.108 50.000 8.37 0.00 0.00 1.28
530 531 0.107897 TTCAACGCGCTGACCCATAT 60.108 50.000 12.49 0.00 0.00 1.78
531 532 1.017177 GTTCAACGCGCTGACCCATA 61.017 55.000 12.49 0.00 0.00 2.74
532 533 2.031919 TTCAACGCGCTGACCCAT 59.968 55.556 12.49 0.00 0.00 4.00
533 534 2.970324 GTTCAACGCGCTGACCCA 60.970 61.111 12.49 0.00 0.00 4.51
534 535 4.072088 CGTTCAACGCGCTGACCC 62.072 66.667 12.49 5.04 33.65 4.46
543 544 0.725784 GGTCAGCAATGCGTTCAACG 60.726 55.000 5.28 5.28 45.88 4.10
544 545 0.387239 GGGTCAGCAATGCGTTCAAC 60.387 55.000 0.00 0.00 0.00 3.18
545 546 0.821301 TGGGTCAGCAATGCGTTCAA 60.821 50.000 0.00 0.00 0.00 2.69
546 547 0.821301 TTGGGTCAGCAATGCGTTCA 60.821 50.000 0.00 0.00 0.00 3.18
547 548 0.313672 TTTGGGTCAGCAATGCGTTC 59.686 50.000 0.00 0.00 0.00 3.95
548 549 0.968405 ATTTGGGTCAGCAATGCGTT 59.032 45.000 0.00 0.00 0.00 4.84
549 550 1.832883 TATTTGGGTCAGCAATGCGT 58.167 45.000 0.00 0.00 0.00 5.24
550 551 2.937469 TTATTTGGGTCAGCAATGCG 57.063 45.000 0.00 0.00 0.00 4.73
570 571 2.094675 CCCACTCGATGCCATCTTTTT 58.905 47.619 2.75 0.00 0.00 1.94
571 572 1.755179 CCCACTCGATGCCATCTTTT 58.245 50.000 2.75 0.00 0.00 2.27
572 573 0.749454 GCCCACTCGATGCCATCTTT 60.749 55.000 2.75 0.00 0.00 2.52
573 574 1.153086 GCCCACTCGATGCCATCTT 60.153 57.895 2.75 0.00 0.00 2.40
574 575 2.507944 GCCCACTCGATGCCATCT 59.492 61.111 2.75 0.00 0.00 2.90
575 576 2.969238 CGCCCACTCGATGCCATC 60.969 66.667 0.00 0.00 0.00 3.51
576 577 4.552365 CCGCCCACTCGATGCCAT 62.552 66.667 0.00 0.00 0.00 4.40
599 600 2.083774 ACAGCACATTTATCCGTGTGG 58.916 47.619 7.50 0.00 44.44 4.17
600 601 2.741517 TGACAGCACATTTATCCGTGTG 59.258 45.455 1.38 1.38 46.42 3.82
601 602 3.002791 CTGACAGCACATTTATCCGTGT 58.997 45.455 0.00 0.00 35.51 4.49
602 603 3.002791 ACTGACAGCACATTTATCCGTG 58.997 45.455 1.25 0.00 36.18 4.94
603 604 3.334583 ACTGACAGCACATTTATCCGT 57.665 42.857 1.25 0.00 0.00 4.69
604 605 4.682787 TCTACTGACAGCACATTTATCCG 58.317 43.478 1.25 0.00 0.00 4.18
605 606 5.403766 CGATCTACTGACAGCACATTTATCC 59.596 44.000 1.25 0.00 0.00 2.59
606 607 5.403766 CCGATCTACTGACAGCACATTTATC 59.596 44.000 1.25 0.00 0.00 1.75
607 608 5.292765 CCGATCTACTGACAGCACATTTAT 58.707 41.667 1.25 0.00 0.00 1.40
608 609 4.682787 CCGATCTACTGACAGCACATTTA 58.317 43.478 1.25 0.00 0.00 1.40
609 610 3.525537 CCGATCTACTGACAGCACATTT 58.474 45.455 1.25 0.00 0.00 2.32
610 611 2.739932 GCCGATCTACTGACAGCACATT 60.740 50.000 1.25 0.00 0.00 2.71
611 612 1.202463 GCCGATCTACTGACAGCACAT 60.202 52.381 1.25 0.00 0.00 3.21
612 613 0.173481 GCCGATCTACTGACAGCACA 59.827 55.000 1.25 0.00 0.00 4.57
613 614 0.867753 CGCCGATCTACTGACAGCAC 60.868 60.000 1.25 0.00 0.00 4.40
614 615 1.313091 ACGCCGATCTACTGACAGCA 61.313 55.000 1.25 0.00 0.00 4.41
615 616 0.867753 CACGCCGATCTACTGACAGC 60.868 60.000 1.25 0.00 0.00 4.40
616 617 0.452184 ACACGCCGATCTACTGACAG 59.548 55.000 0.00 0.00 0.00 3.51
617 618 0.885879 AACACGCCGATCTACTGACA 59.114 50.000 0.00 0.00 0.00 3.58
618 619 2.353889 TCTAACACGCCGATCTACTGAC 59.646 50.000 0.00 0.00 0.00 3.51
619 620 2.612672 CTCTAACACGCCGATCTACTGA 59.387 50.000 0.00 0.00 0.00 3.41
620 621 2.355132 ACTCTAACACGCCGATCTACTG 59.645 50.000 0.00 0.00 0.00 2.74
621 622 2.641305 ACTCTAACACGCCGATCTACT 58.359 47.619 0.00 0.00 0.00 2.57
622 623 3.106672 CAACTCTAACACGCCGATCTAC 58.893 50.000 0.00 0.00 0.00 2.59
623 624 2.479049 GCAACTCTAACACGCCGATCTA 60.479 50.000 0.00 0.00 0.00 1.98
624 625 1.736032 GCAACTCTAACACGCCGATCT 60.736 52.381 0.00 0.00 0.00 2.75
625 626 0.645868 GCAACTCTAACACGCCGATC 59.354 55.000 0.00 0.00 0.00 3.69
626 627 0.246635 AGCAACTCTAACACGCCGAT 59.753 50.000 0.00 0.00 0.00 4.18
627 628 0.388134 GAGCAACTCTAACACGCCGA 60.388 55.000 0.00 0.00 0.00 5.54
628 629 0.388649 AGAGCAACTCTAACACGCCG 60.389 55.000 0.00 0.00 39.28 6.46
629 630 2.649331 TAGAGCAACTCTAACACGCC 57.351 50.000 1.85 0.00 39.74 5.68
635 636 3.192844 CACTCCGGTTAGAGCAACTCTAA 59.807 47.826 11.99 11.99 46.70 2.10
636 637 2.753452 CACTCCGGTTAGAGCAACTCTA 59.247 50.000 0.00 0.16 41.50 2.43
637 638 1.546476 CACTCCGGTTAGAGCAACTCT 59.454 52.381 0.00 2.23 43.83 3.24
638 639 1.997669 CACTCCGGTTAGAGCAACTC 58.002 55.000 0.00 0.00 37.39 3.01
639 640 0.037232 GCACTCCGGTTAGAGCAACT 60.037 55.000 0.00 0.00 37.39 3.16
640 641 1.352156 CGCACTCCGGTTAGAGCAAC 61.352 60.000 12.00 0.00 37.39 4.17
641 642 1.080093 CGCACTCCGGTTAGAGCAA 60.080 57.895 12.00 0.00 37.39 3.91
642 643 2.571757 CGCACTCCGGTTAGAGCA 59.428 61.111 12.00 0.00 37.39 4.26
643 644 2.886124 GCGCACTCCGGTTAGAGC 60.886 66.667 0.30 1.38 37.39 4.09
644 645 0.669318 TTTGCGCACTCCGGTTAGAG 60.669 55.000 11.12 0.00 39.91 2.43
645 646 0.669318 CTTTGCGCACTCCGGTTAGA 60.669 55.000 11.12 0.00 37.44 2.10
646 647 1.635663 CCTTTGCGCACTCCGGTTAG 61.636 60.000 11.12 0.00 37.44 2.34
647 648 1.669760 CCTTTGCGCACTCCGGTTA 60.670 57.895 11.12 0.00 37.44 2.85
648 649 2.978010 CCTTTGCGCACTCCGGTT 60.978 61.111 11.12 0.00 37.44 4.44
659 660 2.558313 GTCTGTGAGCGCCTTTGC 59.442 61.111 2.29 0.00 0.00 3.68
660 661 2.671177 CCGTCTGTGAGCGCCTTTG 61.671 63.158 2.29 0.00 0.00 2.77
661 662 2.357517 CCGTCTGTGAGCGCCTTT 60.358 61.111 2.29 0.00 0.00 3.11
662 663 4.379243 CCCGTCTGTGAGCGCCTT 62.379 66.667 2.29 0.00 0.00 4.35
664 665 4.681978 AACCCGTCTGTGAGCGCC 62.682 66.667 2.29 0.00 0.00 6.53
665 666 3.414700 CAACCCGTCTGTGAGCGC 61.415 66.667 0.00 0.00 0.00 5.92
666 667 2.029073 ACAACCCGTCTGTGAGCG 59.971 61.111 0.00 0.00 0.00 5.03
667 668 0.814010 AACACAACCCGTCTGTGAGC 60.814 55.000 13.72 0.00 45.80 4.26
668 669 1.330521 CAAACACAACCCGTCTGTGAG 59.669 52.381 13.72 2.60 45.80 3.51
669 670 1.374560 CAAACACAACCCGTCTGTGA 58.625 50.000 13.72 0.00 45.80 3.58
671 672 1.711060 CGCAAACACAACCCGTCTGT 61.711 55.000 0.00 0.00 0.00 3.41
672 673 1.010125 CGCAAACACAACCCGTCTG 60.010 57.895 0.00 0.00 0.00 3.51
673 674 0.179078 TACGCAAACACAACCCGTCT 60.179 50.000 0.00 0.00 33.79 4.18
674 675 0.869730 ATACGCAAACACAACCCGTC 59.130 50.000 0.00 0.00 33.79 4.79
675 676 0.589223 CATACGCAAACACAACCCGT 59.411 50.000 0.00 0.00 36.07 5.28
676 677 0.589223 ACATACGCAAACACAACCCG 59.411 50.000 0.00 0.00 0.00 5.28
677 678 2.033550 TGAACATACGCAAACACAACCC 59.966 45.455 0.00 0.00 0.00 4.11
678 679 3.341857 TGAACATACGCAAACACAACC 57.658 42.857 0.00 0.00 0.00 3.77
679 680 4.317069 GCTTTGAACATACGCAAACACAAC 60.317 41.667 0.00 0.00 31.37 3.32
680 681 3.794028 GCTTTGAACATACGCAAACACAA 59.206 39.130 0.00 0.00 31.37 3.33
681 682 3.066064 AGCTTTGAACATACGCAAACACA 59.934 39.130 0.00 0.00 31.37 3.72
682 683 3.628017 AGCTTTGAACATACGCAAACAC 58.372 40.909 0.00 0.00 31.37 3.32
683 684 3.980646 AGCTTTGAACATACGCAAACA 57.019 38.095 0.00 0.00 31.37 2.83
684 685 5.912955 ACTTTAGCTTTGAACATACGCAAAC 59.087 36.000 0.00 0.00 31.37 2.93
685 686 5.912396 CACTTTAGCTTTGAACATACGCAAA 59.088 36.000 0.00 0.00 33.41 3.68
686 687 5.008217 ACACTTTAGCTTTGAACATACGCAA 59.992 36.000 0.00 0.00 0.00 4.85
687 688 4.513692 ACACTTTAGCTTTGAACATACGCA 59.486 37.500 0.00 0.00 0.00 5.24
688 689 5.030874 ACACTTTAGCTTTGAACATACGC 57.969 39.130 0.00 0.00 0.00 4.42
689 690 7.148474 ACCATACACTTTAGCTTTGAACATACG 60.148 37.037 0.00 0.00 0.00 3.06
690 691 8.040716 ACCATACACTTTAGCTTTGAACATAC 57.959 34.615 0.00 0.00 0.00 2.39
691 692 7.064134 CGACCATACACTTTAGCTTTGAACATA 59.936 37.037 0.00 0.00 0.00 2.29
692 693 6.128282 CGACCATACACTTTAGCTTTGAACAT 60.128 38.462 0.00 0.00 0.00 2.71
693 694 5.178623 CGACCATACACTTTAGCTTTGAACA 59.821 40.000 0.00 0.00 0.00 3.18
694 695 5.618561 CGACCATACACTTTAGCTTTGAAC 58.381 41.667 0.00 0.00 0.00 3.18
695 696 4.153475 GCGACCATACACTTTAGCTTTGAA 59.847 41.667 0.00 0.00 0.00 2.69
696 697 3.682858 GCGACCATACACTTTAGCTTTGA 59.317 43.478 0.00 0.00 0.00 2.69
697 698 3.181510 GGCGACCATACACTTTAGCTTTG 60.182 47.826 0.00 0.00 0.00 2.77
698 699 3.007635 GGCGACCATACACTTTAGCTTT 58.992 45.455 0.00 0.00 0.00 3.51
699 700 2.629051 GGCGACCATACACTTTAGCTT 58.371 47.619 0.00 0.00 0.00 3.74
700 701 1.470979 CGGCGACCATACACTTTAGCT 60.471 52.381 0.00 0.00 0.00 3.32
701 702 0.928229 CGGCGACCATACACTTTAGC 59.072 55.000 0.00 0.00 0.00 3.09
702 703 1.135527 TCCGGCGACCATACACTTTAG 59.864 52.381 9.30 0.00 0.00 1.85
703 704 1.184431 TCCGGCGACCATACACTTTA 58.816 50.000 9.30 0.00 0.00 1.85
704 705 0.322322 TTCCGGCGACCATACACTTT 59.678 50.000 9.30 0.00 0.00 2.66
705 706 0.390735 GTTCCGGCGACCATACACTT 60.391 55.000 9.30 0.00 0.00 3.16
743 744 0.319297 ACTGGCTTTGTCGTACGGAC 60.319 55.000 16.52 12.55 46.27 4.79
753 754 0.746063 TGCTTTGGTCACTGGCTTTG 59.254 50.000 0.00 0.00 0.00 2.77
765 766 5.826737 ACTGATGATAATCTTCCTGCTTTGG 59.173 40.000 0.00 0.00 0.00 3.28
809 810 2.028476 TCGGGTGGTTTAGATGTCTGTG 60.028 50.000 0.00 0.00 0.00 3.66
835 836 1.573108 TTGGGTTTGGGTTTGAGCAA 58.427 45.000 0.00 0.00 0.00 3.91
853 857 1.905354 GCTGAGCTGGCCTTGGTTT 60.905 57.895 3.32 0.00 0.00 3.27
854 858 2.282745 GCTGAGCTGGCCTTGGTT 60.283 61.111 3.32 0.00 0.00 3.67
855 859 3.564345 CTGCTGAGCTGGCCTTGGT 62.564 63.158 5.83 1.86 0.00 3.67
856 860 2.750637 CTGCTGAGCTGGCCTTGG 60.751 66.667 5.83 0.00 0.00 3.61
857 861 2.039405 GTCTGCTGAGCTGGCCTTG 61.039 63.158 11.46 0.00 0.00 3.61
930 943 2.991540 GGTGTGAAAGGGGGCAGC 60.992 66.667 0.00 0.00 0.00 5.25
1356 1409 3.132139 TCCTCGGGCGACTCGAAG 61.132 66.667 1.63 0.00 36.15 3.79
1641 1694 4.161295 CTCCATCTGGCCGCGGAA 62.161 66.667 33.48 15.82 34.44 4.30
2184 2241 1.411651 GCCTGACCAGTATCCCCTCC 61.412 65.000 0.00 0.00 0.00 4.30
3169 3357 2.358898 AGCATACGTCATCCAAAATGCC 59.641 45.455 11.05 0.00 40.38 4.40
3176 3364 7.766738 TGACTAATTTTTAGCATACGTCATCCA 59.233 33.333 0.00 0.00 0.00 3.41
3363 3552 3.437395 TGGTATGGTGTTTTGCGACATAC 59.563 43.478 0.00 0.00 41.76 2.39
3379 3568 7.408756 TTTGAAAGAGGATTCCAATGGTATG 57.591 36.000 5.29 0.00 0.00 2.39
3466 3655 4.435970 CCGGGTTTACTGGGGCCC 62.436 72.222 18.17 18.17 42.34 5.80
3474 3663 1.558294 ACTTCCTCCATCCGGGTTTAC 59.442 52.381 0.00 0.00 38.11 2.01
3505 3694 8.788813 CATTGCTCGATAAACTACAAAATCAAC 58.211 33.333 0.00 0.00 0.00 3.18
3715 3904 1.850345 TGTCTAGGGGCCCAAATTAGG 59.150 52.381 27.72 5.95 0.00 2.69
3732 3921 0.368227 CAGACGCTTTCGCAGATGTC 59.632 55.000 0.00 0.00 39.84 3.06
3738 3927 1.664649 CTGTCCAGACGCTTTCGCA 60.665 57.895 0.00 0.00 39.84 5.10
3807 3997 5.239087 GGTAACAGTTTTGGTTCGGTATTCA 59.761 40.000 0.00 0.00 0.00 2.57
3820 4010 7.628769 TTTCGGTCTTTTAGGTAACAGTTTT 57.371 32.000 0.00 0.00 41.41 2.43
3825 4015 6.016943 CCAACATTTCGGTCTTTTAGGTAACA 60.017 38.462 0.00 0.00 41.41 2.41
3828 4019 5.623169 ACCAACATTTCGGTCTTTTAGGTA 58.377 37.500 0.00 0.00 0.00 3.08
3832 4023 9.465985 GATAAAAACCAACATTTCGGTCTTTTA 57.534 29.630 0.00 0.00 35.16 1.52
3840 4031 7.153217 ACTAGGGATAAAAACCAACATTTCG 57.847 36.000 0.00 0.00 0.00 3.46
3846 4037 9.895138 TTATCTGTACTAGGGATAAAAACCAAC 57.105 33.333 0.00 0.00 31.60 3.77
3888 4079 7.844009 ACCGACCTTATCTAATTTGTTAGTGA 58.156 34.615 0.00 0.00 0.00 3.41
3896 4087 5.114081 CACCGAACCGACCTTATCTAATTT 58.886 41.667 0.00 0.00 0.00 1.82
3935 4126 3.181469 GCCATACAGGTCGGTTTCTATCA 60.181 47.826 0.00 0.00 40.61 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.