Multiple sequence alignment - TraesCS3A01G429400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G429400 chr3A 100.000 2639 0 0 1 2639 672215417 672218055 0.000000e+00 4874.0
1 TraesCS3A01G429400 chr3A 83.424 923 146 7 724 1644 672206293 672207210 0.000000e+00 850.0
2 TraesCS3A01G429400 chr3A 85.434 611 79 10 1851 2456 55378628 55378023 6.200000e-176 627.0
3 TraesCS3A01G429400 chr3B 91.007 1212 100 7 647 1852 709516599 709517807 0.000000e+00 1626.0
4 TraesCS3A01G429400 chr3B 83.433 501 83 0 1144 1644 709287043 709287543 1.430000e-127 466.0
5 TraesCS3A01G429400 chr3B 100.000 88 0 0 455 542 709514563 709514650 2.100000e-36 163.0
6 TraesCS3A01G429400 chr3D 90.581 775 40 5 1079 1852 537031278 537032020 0.000000e+00 996.0
7 TraesCS3A01G429400 chr3D 83.203 1024 156 10 628 1644 536952334 536953348 0.000000e+00 924.0
8 TraesCS3A01G429400 chr3D 91.769 571 41 2 598 1162 536989228 536989798 0.000000e+00 789.0
9 TraesCS3A01G429400 chr3D 96.129 310 10 2 1851 2159 7429105 7428797 3.030000e-139 505.0
10 TraesCS3A01G429400 chr3D 95.806 310 11 2 1851 2159 507868666 507868358 1.410000e-137 499.0
11 TraesCS3A01G429400 chr3D 95.806 310 11 2 1851 2159 557958377 557958069 1.410000e-137 499.0
12 TraesCS3A01G429400 chr3D 95.484 310 12 2 1851 2159 273267474 273267166 6.560000e-136 494.0
13 TraesCS3A01G429400 chr3D 87.273 440 29 10 637 1076 537023346 537023758 6.610000e-131 477.0
14 TraesCS3A01G429400 chr3D 91.860 344 19 5 298 637 536992796 536993134 3.070000e-129 472.0
15 TraesCS3A01G429400 chr3D 90.343 321 26 2 2140 2455 67181755 67182075 1.460000e-112 416.0
16 TraesCS3A01G429400 chr3D 90.355 197 14 5 2448 2639 537032015 537032211 1.210000e-63 254.0
17 TraesCS3A01G429400 chr7B 83.756 985 146 12 662 1642 629019341 629020315 0.000000e+00 920.0
18 TraesCS3A01G429400 chr7B 91.111 315 25 2 2141 2452 139049451 139049765 8.730000e-115 424.0
19 TraesCS3A01G429400 chr7D 83.743 855 125 8 789 1642 572018227 572019068 0.000000e+00 797.0
20 TraesCS3A01G429400 chr7D 95.484 310 12 2 1851 2159 522870436 522870744 6.560000e-136 494.0
21 TraesCS3A01G429400 chr7D 90.343 321 26 2 2140 2455 267259944 267260264 1.460000e-112 416.0
22 TraesCS3A01G429400 chr7D 94.872 39 2 0 872 910 631734892 631734930 7.890000e-06 62.1
23 TraesCS3A01G429400 chr6D 95.484 310 12 2 1851 2159 309103942 309103634 6.560000e-136 494.0
24 TraesCS3A01G429400 chr6D 88.947 380 39 3 1847 2225 401304718 401305095 1.430000e-127 466.0
25 TraesCS3A01G429400 chr6D 87.826 115 12 2 135 248 98116746 98116859 1.650000e-27 134.0
26 TraesCS3A01G429400 chr6D 85.321 109 14 2 140 247 98114445 98114338 7.720000e-21 111.0
27 TraesCS3A01G429400 chr6D 89.412 85 7 2 164 247 472267546 472267463 3.590000e-19 106.0
28 TraesCS3A01G429400 chr6D 97.619 42 1 0 872 913 121300803 121300762 3.640000e-09 73.1
29 TraesCS3A01G429400 chr4A 92.442 344 18 6 1850 2191 82990630 82990293 3.950000e-133 484.0
30 TraesCS3A01G429400 chr1A 96.140 285 10 1 2151 2434 553135053 553135337 5.140000e-127 464.0
31 TraesCS3A01G429400 chr7A 96.071 280 10 1 2157 2435 713223472 713223751 3.100000e-124 455.0
32 TraesCS3A01G429400 chr7A 80.137 146 22 6 104 246 689972290 689972149 4.650000e-18 102.0
33 TraesCS3A01G429400 chr2A 96.000 275 10 1 2159 2432 98156686 98156960 1.860000e-121 446.0
34 TraesCS3A01G429400 chr2A 82.209 163 23 4 846 1007 19436291 19436134 4.580000e-28 135.0
35 TraesCS3A01G429400 chr1D 90.343 321 25 3 2140 2455 229791780 229791461 1.460000e-112 416.0
36 TraesCS3A01G429400 chr1D 90.566 318 25 2 2140 2452 280172973 280172656 1.460000e-112 416.0
37 TraesCS3A01G429400 chr2D 82.447 188 23 8 67 249 70503168 70502986 3.520000e-34 156.0
38 TraesCS3A01G429400 chr2D 81.132 159 30 0 848 1006 18269622 18269464 7.670000e-26 128.0
39 TraesCS3A01G429400 chr2D 73.089 327 73 11 842 1162 13856404 13856721 4.650000e-18 102.0
40 TraesCS3A01G429400 chr2B 81.818 165 30 0 842 1006 30313383 30313219 3.540000e-29 139.0
41 TraesCS3A01G429400 chr2B 85.088 114 14 3 135 247 781711057 781711168 2.150000e-21 113.0
42 TraesCS3A01G429400 chr5D 87.719 114 11 3 135 247 487866121 487866232 2.130000e-26 130.0
43 TraesCS3A01G429400 chr5B 86.842 114 12 3 135 247 600483853 600483964 9.920000e-25 124.0
44 TraesCS3A01G429400 chr6A 92.593 81 4 2 169 248 117433967 117434046 5.970000e-22 115.0
45 TraesCS3A01G429400 chr6A 90.909 55 5 0 258 312 61678560 61678614 1.010000e-09 75.0
46 TraesCS3A01G429400 chr6A 88.679 53 4 2 872 923 158409244 158409295 2.190000e-06 63.9
47 TraesCS3A01G429400 chr4D 80.142 141 20 6 104 243 366336485 366336352 6.010000e-17 99.0
48 TraesCS3A01G429400 chr4B 94.872 39 2 0 872 910 605517546 605517584 7.890000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G429400 chr3A 672215417 672218055 2638 False 4874.0 4874 100.0000 1 2639 1 chr3A.!!$F2 2638
1 TraesCS3A01G429400 chr3A 672206293 672207210 917 False 850.0 850 83.4240 724 1644 1 chr3A.!!$F1 920
2 TraesCS3A01G429400 chr3A 55378023 55378628 605 True 627.0 627 85.4340 1851 2456 1 chr3A.!!$R1 605
3 TraesCS3A01G429400 chr3B 709514563 709517807 3244 False 894.5 1626 95.5035 455 1852 2 chr3B.!!$F2 1397
4 TraesCS3A01G429400 chr3B 709287043 709287543 500 False 466.0 466 83.4330 1144 1644 1 chr3B.!!$F1 500
5 TraesCS3A01G429400 chr3D 536952334 536953348 1014 False 924.0 924 83.2030 628 1644 1 chr3D.!!$F2 1016
6 TraesCS3A01G429400 chr3D 536989228 536993134 3906 False 630.5 789 91.8145 298 1162 2 chr3D.!!$F4 864
7 TraesCS3A01G429400 chr3D 537031278 537032211 933 False 625.0 996 90.4680 1079 2639 2 chr3D.!!$F5 1560
8 TraesCS3A01G429400 chr7B 629019341 629020315 974 False 920.0 920 83.7560 662 1642 1 chr7B.!!$F2 980
9 TraesCS3A01G429400 chr7D 572018227 572019068 841 False 797.0 797 83.7430 789 1642 1 chr7D.!!$F3 853

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
413 414 0.033228 CGCCCATTGTTGCCTTTTCA 59.967 50.0 0.0 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1664 5904 1.019278 TGCACGTAGCCTTAGCAAGC 61.019 55.0 7.38 0.0 44.83 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.774820 TCTCCTCTCTGCTGGGAC 57.225 61.111 0.00 0.00 0.00 4.46
18 19 1.000993 TCTCCTCTCTGCTGGGACC 59.999 63.158 0.00 0.00 0.00 4.46
19 20 2.039624 TCCTCTCTGCTGGGACCC 59.960 66.667 2.45 2.45 0.00 4.46
20 21 2.284921 CCTCTCTGCTGGGACCCA 60.285 66.667 14.08 14.08 0.00 4.51
21 22 2.664081 CCTCTCTGCTGGGACCCAC 61.664 68.421 9.95 7.65 0.00 4.61
22 23 1.915266 CTCTCTGCTGGGACCCACA 60.915 63.158 9.95 12.06 0.00 4.17
23 24 1.229625 TCTCTGCTGGGACCCACAT 60.230 57.895 9.95 0.00 0.00 3.21
24 25 1.077930 CTCTGCTGGGACCCACATG 60.078 63.158 9.95 0.64 0.00 3.21
25 26 1.845627 CTCTGCTGGGACCCACATGT 61.846 60.000 9.95 0.00 0.00 3.21
26 27 0.546507 TCTGCTGGGACCCACATGTA 60.547 55.000 9.95 0.00 0.00 2.29
27 28 0.327924 CTGCTGGGACCCACATGTAA 59.672 55.000 9.95 0.00 0.00 2.41
28 29 0.327924 TGCTGGGACCCACATGTAAG 59.672 55.000 9.95 0.00 0.00 2.34
29 30 0.328258 GCTGGGACCCACATGTAAGT 59.672 55.000 9.95 0.00 0.00 2.24
30 31 1.950484 GCTGGGACCCACATGTAAGTG 60.950 57.143 9.95 0.00 39.21 3.16
39 40 2.991250 CACATGTAAGTGGGAGGAAGG 58.009 52.381 0.00 0.00 35.88 3.46
40 41 2.571653 CACATGTAAGTGGGAGGAAGGA 59.428 50.000 0.00 0.00 35.88 3.36
41 42 2.840651 ACATGTAAGTGGGAGGAAGGAG 59.159 50.000 0.00 0.00 0.00 3.69
42 43 1.952621 TGTAAGTGGGAGGAAGGAGG 58.047 55.000 0.00 0.00 0.00 4.30
43 44 1.151413 TGTAAGTGGGAGGAAGGAGGT 59.849 52.381 0.00 0.00 0.00 3.85
44 45 1.832366 GTAAGTGGGAGGAAGGAGGTC 59.168 57.143 0.00 0.00 0.00 3.85
45 46 0.193574 AAGTGGGAGGAAGGAGGTCA 59.806 55.000 0.00 0.00 0.00 4.02
46 47 0.419459 AGTGGGAGGAAGGAGGTCAT 59.581 55.000 0.00 0.00 0.00 3.06
47 48 0.543749 GTGGGAGGAAGGAGGTCATG 59.456 60.000 0.00 0.00 0.00 3.07
48 49 0.119155 TGGGAGGAAGGAGGTCATGT 59.881 55.000 0.00 0.00 0.00 3.21
49 50 1.290134 GGGAGGAAGGAGGTCATGTT 58.710 55.000 0.00 0.00 0.00 2.71
50 51 1.210722 GGGAGGAAGGAGGTCATGTTC 59.789 57.143 0.00 0.00 0.00 3.18
51 52 1.210722 GGAGGAAGGAGGTCATGTTCC 59.789 57.143 2.97 2.97 39.08 3.62
52 53 0.905357 AGGAAGGAGGTCATGTTCCG 59.095 55.000 5.21 0.00 42.87 4.30
53 54 0.902531 GGAAGGAGGTCATGTTCCGA 59.097 55.000 0.00 0.00 38.54 4.55
54 55 1.486726 GGAAGGAGGTCATGTTCCGAT 59.513 52.381 0.00 0.00 38.54 4.18
55 56 2.483889 GGAAGGAGGTCATGTTCCGATC 60.484 54.545 0.00 3.90 38.54 3.69
56 57 1.123928 AGGAGGTCATGTTCCGATCC 58.876 55.000 0.00 1.83 38.54 3.36
57 58 0.106894 GGAGGTCATGTTCCGATCCC 59.893 60.000 0.00 0.00 0.00 3.85
58 59 0.830648 GAGGTCATGTTCCGATCCCA 59.169 55.000 0.00 0.00 0.00 4.37
59 60 0.833287 AGGTCATGTTCCGATCCCAG 59.167 55.000 0.00 0.00 0.00 4.45
60 61 0.815615 GGTCATGTTCCGATCCCAGC 60.816 60.000 0.00 0.00 0.00 4.85
61 62 0.179000 GTCATGTTCCGATCCCAGCT 59.821 55.000 0.00 0.00 0.00 4.24
62 63 0.465705 TCATGTTCCGATCCCAGCTC 59.534 55.000 0.00 0.00 0.00 4.09
63 64 0.178767 CATGTTCCGATCCCAGCTCA 59.821 55.000 0.00 0.00 0.00 4.26
64 65 0.467384 ATGTTCCGATCCCAGCTCAG 59.533 55.000 0.00 0.00 0.00 3.35
65 66 1.522580 GTTCCGATCCCAGCTCAGC 60.523 63.158 0.00 0.00 0.00 4.26
66 67 2.735772 TTCCGATCCCAGCTCAGCC 61.736 63.158 0.00 0.00 0.00 4.85
67 68 4.598894 CCGATCCCAGCTCAGCCG 62.599 72.222 0.00 0.00 0.00 5.52
68 69 4.598894 CGATCCCAGCTCAGCCGG 62.599 72.222 0.00 0.00 0.00 6.13
69 70 4.925861 GATCCCAGCTCAGCCGGC 62.926 72.222 21.89 21.89 0.00 6.13
90 91 4.323477 CCGTCACCCCTTTCGGCA 62.323 66.667 0.00 0.00 36.68 5.69
91 92 3.047877 CGTCACCCCTTTCGGCAC 61.048 66.667 0.00 0.00 0.00 5.01
104 105 4.811761 GGCACGTCGGCGATTTGC 62.812 66.667 27.74 27.74 45.38 3.68
113 114 4.933483 GCGATTTGCCACGTCAAA 57.067 50.000 5.05 5.05 39.87 2.69
114 115 3.171705 GCGATTTGCCACGTCAAAA 57.828 47.368 6.52 0.00 39.13 2.44
115 116 1.696988 GCGATTTGCCACGTCAAAAT 58.303 45.000 6.52 3.42 39.13 1.82
116 117 1.386412 GCGATTTGCCACGTCAAAATG 59.614 47.619 6.52 4.09 39.13 2.32
117 118 1.386412 CGATTTGCCACGTCAAAATGC 59.614 47.619 6.52 0.39 39.13 3.56
118 119 1.386412 GATTTGCCACGTCAAAATGCG 59.614 47.619 6.52 0.00 39.13 4.73
119 120 0.382158 TTTGCCACGTCAAAATGCGA 59.618 45.000 0.29 0.00 33.47 5.10
120 121 0.595588 TTGCCACGTCAAAATGCGAT 59.404 45.000 0.00 0.00 0.00 4.58
121 122 0.167908 TGCCACGTCAAAATGCGATC 59.832 50.000 0.00 0.00 0.00 3.69
122 123 0.167908 GCCACGTCAAAATGCGATCA 59.832 50.000 0.00 0.00 0.00 2.92
123 124 1.400888 GCCACGTCAAAATGCGATCAA 60.401 47.619 0.00 0.00 0.00 2.57
124 125 2.920227 GCCACGTCAAAATGCGATCAAA 60.920 45.455 0.00 0.00 0.00 2.69
125 126 3.304257 CCACGTCAAAATGCGATCAAAA 58.696 40.909 0.00 0.00 0.00 2.44
126 127 3.919804 CCACGTCAAAATGCGATCAAAAT 59.080 39.130 0.00 0.00 0.00 1.82
127 128 4.385447 CCACGTCAAAATGCGATCAAAATT 59.615 37.500 0.00 0.00 0.00 1.82
128 129 5.107530 CCACGTCAAAATGCGATCAAAATTT 60.108 36.000 0.00 0.00 0.00 1.82
129 130 6.354080 CACGTCAAAATGCGATCAAAATTTT 58.646 32.000 0.00 0.00 34.63 1.82
130 131 6.298105 CACGTCAAAATGCGATCAAAATTTTG 59.702 34.615 22.40 22.40 45.87 2.44
131 132 5.278827 CGTCAAAATGCGATCAAAATTTTGC 59.721 36.000 23.36 13.71 44.91 3.68
132 133 6.365050 GTCAAAATGCGATCAAAATTTTGCT 58.635 32.000 23.36 15.72 44.91 3.91
133 134 7.508965 GTCAAAATGCGATCAAAATTTTGCTA 58.491 30.769 23.36 10.00 44.91 3.49
134 135 8.008844 GTCAAAATGCGATCAAAATTTTGCTAA 58.991 29.630 23.36 9.32 44.91 3.09
135 136 8.222433 TCAAAATGCGATCAAAATTTTGCTAAG 58.778 29.630 23.36 15.45 44.91 2.18
136 137 7.656707 AAATGCGATCAAAATTTTGCTAAGT 57.343 28.000 23.36 8.65 38.05 2.24
137 138 6.636666 ATGCGATCAAAATTTTGCTAAGTG 57.363 33.333 23.36 11.79 38.05 3.16
138 139 5.527951 TGCGATCAAAATTTTGCTAAGTGT 58.472 33.333 23.36 5.62 38.05 3.55
139 140 5.982516 TGCGATCAAAATTTTGCTAAGTGTT 59.017 32.000 23.36 0.00 38.05 3.32
140 141 6.478344 TGCGATCAAAATTTTGCTAAGTGTTT 59.522 30.769 23.36 2.54 38.05 2.83
141 142 7.010923 TGCGATCAAAATTTTGCTAAGTGTTTT 59.989 29.630 23.36 1.22 38.05 2.43
142 143 7.850492 GCGATCAAAATTTTGCTAAGTGTTTTT 59.150 29.630 23.36 0.00 38.05 1.94
178 179 3.791973 TTTTGGTTCGATGCAAAGTGT 57.208 38.095 0.00 0.00 0.00 3.55
179 180 3.347958 TTTGGTTCGATGCAAAGTGTC 57.652 42.857 0.00 0.00 0.00 3.67
180 181 1.960417 TGGTTCGATGCAAAGTGTCA 58.040 45.000 0.00 0.00 0.00 3.58
181 182 1.601903 TGGTTCGATGCAAAGTGTCAC 59.398 47.619 0.00 0.00 0.00 3.67
182 183 1.601903 GGTTCGATGCAAAGTGTCACA 59.398 47.619 5.62 0.00 0.00 3.58
183 184 2.226437 GGTTCGATGCAAAGTGTCACAT 59.774 45.455 5.62 0.00 0.00 3.21
184 185 3.304659 GGTTCGATGCAAAGTGTCACATT 60.305 43.478 5.62 0.00 0.00 2.71
185 186 4.290155 GTTCGATGCAAAGTGTCACATTT 58.710 39.130 5.62 0.58 0.00 2.32
186 187 5.448438 GTTCGATGCAAAGTGTCACATTTA 58.552 37.500 5.62 0.00 0.00 1.40
187 188 5.878332 TCGATGCAAAGTGTCACATTTAT 57.122 34.783 5.62 0.00 0.00 1.40
188 189 6.976636 TCGATGCAAAGTGTCACATTTATA 57.023 33.333 5.62 0.00 0.00 0.98
189 190 7.371126 TCGATGCAAAGTGTCACATTTATAA 57.629 32.000 5.62 0.00 0.00 0.98
190 191 7.811653 TCGATGCAAAGTGTCACATTTATAAA 58.188 30.769 5.62 0.00 0.00 1.40
191 192 7.962373 TCGATGCAAAGTGTCACATTTATAAAG 59.038 33.333 5.62 0.00 0.00 1.85
192 193 7.750458 CGATGCAAAGTGTCACATTTATAAAGT 59.250 33.333 5.62 0.02 0.00 2.66
193 194 8.746922 ATGCAAAGTGTCACATTTATAAAGTG 57.253 30.769 5.62 15.78 34.67 3.16
194 195 7.935520 TGCAAAGTGTCACATTTATAAAGTGA 58.064 30.769 18.52 18.52 39.74 3.41
195 196 8.575589 TGCAAAGTGTCACATTTATAAAGTGAT 58.424 29.630 22.21 11.68 43.35 3.06
196 197 8.853345 GCAAAGTGTCACATTTATAAAGTGATG 58.147 33.333 22.21 18.46 43.35 3.07
197 198 9.345517 CAAAGTGTCACATTTATAAAGTGATGG 57.654 33.333 22.21 9.45 43.35 3.51
198 199 8.635765 AAGTGTCACATTTATAAAGTGATGGT 57.364 30.769 22.21 13.08 43.35 3.55
199 200 8.635765 AGTGTCACATTTATAAAGTGATGGTT 57.364 30.769 22.21 12.51 43.35 3.67
200 201 9.077885 AGTGTCACATTTATAAAGTGATGGTTT 57.922 29.630 22.21 11.46 43.35 3.27
201 202 9.691362 GTGTCACATTTATAAAGTGATGGTTTT 57.309 29.630 22.21 0.00 43.35 2.43
204 205 9.921637 TCACATTTATAAAGTGATGGTTTTTCC 57.078 29.630 18.52 0.00 37.36 3.13
205 206 8.859156 CACATTTATAAAGTGATGGTTTTTCCG 58.141 33.333 16.45 0.00 35.71 4.30
206 207 8.798402 ACATTTATAAAGTGATGGTTTTTCCGA 58.202 29.630 3.94 0.00 39.52 4.55
207 208 9.289303 CATTTATAAAGTGATGGTTTTTCCGAG 57.711 33.333 3.94 0.00 39.52 4.63
208 209 8.624367 TTTATAAAGTGATGGTTTTTCCGAGA 57.376 30.769 0.00 0.00 39.52 4.04
209 210 6.743575 ATAAAGTGATGGTTTTTCCGAGAG 57.256 37.500 0.00 0.00 39.52 3.20
210 211 2.427506 AGTGATGGTTTTTCCGAGAGC 58.572 47.619 0.00 0.00 39.52 4.09
211 212 2.039084 AGTGATGGTTTTTCCGAGAGCT 59.961 45.455 0.00 0.00 39.52 4.09
212 213 3.260884 AGTGATGGTTTTTCCGAGAGCTA 59.739 43.478 0.00 0.00 39.52 3.32
213 214 4.080863 AGTGATGGTTTTTCCGAGAGCTAT 60.081 41.667 0.00 0.00 39.52 2.97
214 215 4.034510 GTGATGGTTTTTCCGAGAGCTATG 59.965 45.833 0.00 0.00 39.52 2.23
215 216 3.973206 TGGTTTTTCCGAGAGCTATGA 57.027 42.857 0.00 0.00 39.52 2.15
216 217 3.596214 TGGTTTTTCCGAGAGCTATGAC 58.404 45.455 0.00 0.00 39.52 3.06
217 218 2.603560 GGTTTTTCCGAGAGCTATGACG 59.396 50.000 0.00 0.00 0.00 4.35
218 219 1.922570 TTTTCCGAGAGCTATGACGC 58.077 50.000 0.00 0.00 0.00 5.19
219 220 1.103803 TTTCCGAGAGCTATGACGCT 58.896 50.000 0.00 0.00 44.33 5.07
220 221 1.963172 TTCCGAGAGCTATGACGCTA 58.037 50.000 0.00 0.00 41.08 4.26
221 222 1.963172 TCCGAGAGCTATGACGCTAA 58.037 50.000 0.00 0.00 41.08 3.09
222 223 2.505405 TCCGAGAGCTATGACGCTAAT 58.495 47.619 0.00 0.00 41.08 1.73
223 224 2.226674 TCCGAGAGCTATGACGCTAATG 59.773 50.000 0.00 0.00 41.08 1.90
224 225 2.030717 CCGAGAGCTATGACGCTAATGT 60.031 50.000 0.00 0.00 41.08 2.71
225 226 2.976509 CGAGAGCTATGACGCTAATGTG 59.023 50.000 0.00 0.00 41.08 3.21
226 227 3.312828 GAGAGCTATGACGCTAATGTGG 58.687 50.000 0.00 0.00 41.08 4.17
227 228 2.695666 AGAGCTATGACGCTAATGTGGT 59.304 45.455 0.00 0.00 41.08 4.16
228 229 2.797156 GAGCTATGACGCTAATGTGGTG 59.203 50.000 0.00 0.00 41.08 4.17
229 230 1.867233 GCTATGACGCTAATGTGGTGG 59.133 52.381 0.00 0.00 0.00 4.61
230 231 2.741878 GCTATGACGCTAATGTGGTGGT 60.742 50.000 0.00 0.00 0.00 4.16
231 232 2.489938 ATGACGCTAATGTGGTGGTT 57.510 45.000 0.00 0.00 0.00 3.67
232 233 1.803334 TGACGCTAATGTGGTGGTTC 58.197 50.000 0.00 0.00 0.00 3.62
233 234 1.346395 TGACGCTAATGTGGTGGTTCT 59.654 47.619 0.00 0.00 0.00 3.01
234 235 1.732259 GACGCTAATGTGGTGGTTCTG 59.268 52.381 0.00 0.00 0.00 3.02
235 236 1.071699 ACGCTAATGTGGTGGTTCTGT 59.928 47.619 0.00 0.00 0.00 3.41
236 237 1.464608 CGCTAATGTGGTGGTTCTGTG 59.535 52.381 0.00 0.00 0.00 3.66
237 238 1.200020 GCTAATGTGGTGGTTCTGTGC 59.800 52.381 0.00 0.00 0.00 4.57
238 239 2.503331 CTAATGTGGTGGTTCTGTGCA 58.497 47.619 0.00 0.00 0.00 4.57
239 240 1.999648 AATGTGGTGGTTCTGTGCAT 58.000 45.000 0.00 0.00 0.00 3.96
240 241 1.999648 ATGTGGTGGTTCTGTGCATT 58.000 45.000 0.00 0.00 0.00 3.56
241 242 1.774110 TGTGGTGGTTCTGTGCATTT 58.226 45.000 0.00 0.00 0.00 2.32
242 243 2.106566 TGTGGTGGTTCTGTGCATTTT 58.893 42.857 0.00 0.00 0.00 1.82
243 244 3.291584 TGTGGTGGTTCTGTGCATTTTA 58.708 40.909 0.00 0.00 0.00 1.52
244 245 3.067461 TGTGGTGGTTCTGTGCATTTTAC 59.933 43.478 0.00 0.00 0.00 2.01
245 246 3.317993 GTGGTGGTTCTGTGCATTTTACT 59.682 43.478 0.00 0.00 0.00 2.24
246 247 3.568007 TGGTGGTTCTGTGCATTTTACTC 59.432 43.478 0.00 0.00 0.00 2.59
247 248 3.821033 GGTGGTTCTGTGCATTTTACTCT 59.179 43.478 0.00 0.00 0.00 3.24
248 249 4.083271 GGTGGTTCTGTGCATTTTACTCTC 60.083 45.833 0.00 0.00 0.00 3.20
249 250 4.757149 GTGGTTCTGTGCATTTTACTCTCT 59.243 41.667 0.00 0.00 0.00 3.10
250 251 4.997395 TGGTTCTGTGCATTTTACTCTCTC 59.003 41.667 0.00 0.00 0.00 3.20
251 252 4.997395 GGTTCTGTGCATTTTACTCTCTCA 59.003 41.667 0.00 0.00 0.00 3.27
252 253 5.470098 GGTTCTGTGCATTTTACTCTCTCAA 59.530 40.000 0.00 0.00 0.00 3.02
253 254 6.017109 GGTTCTGTGCATTTTACTCTCTCAAA 60.017 38.462 0.00 0.00 0.00 2.69
254 255 6.545504 TCTGTGCATTTTACTCTCTCAAAC 57.454 37.500 0.00 0.00 0.00 2.93
255 256 5.470098 TCTGTGCATTTTACTCTCTCAAACC 59.530 40.000 0.00 0.00 0.00 3.27
256 257 4.518970 TGTGCATTTTACTCTCTCAAACCC 59.481 41.667 0.00 0.00 0.00 4.11
257 258 4.518970 GTGCATTTTACTCTCTCAAACCCA 59.481 41.667 0.00 0.00 0.00 4.51
258 259 5.183904 GTGCATTTTACTCTCTCAAACCCAT 59.816 40.000 0.00 0.00 0.00 4.00
259 260 5.774690 TGCATTTTACTCTCTCAAACCCATT 59.225 36.000 0.00 0.00 0.00 3.16
260 261 6.945435 TGCATTTTACTCTCTCAAACCCATTA 59.055 34.615 0.00 0.00 0.00 1.90
261 262 7.615365 TGCATTTTACTCTCTCAAACCCATTAT 59.385 33.333 0.00 0.00 0.00 1.28
262 263 9.120538 GCATTTTACTCTCTCAAACCCATTATA 57.879 33.333 0.00 0.00 0.00 0.98
279 280 9.847224 ACCCATTATATACTTTTACCTCTTGTG 57.153 33.333 0.00 0.00 0.00 3.33
280 281 9.847224 CCCATTATATACTTTTACCTCTTGTGT 57.153 33.333 0.00 0.00 0.00 3.72
287 288 8.747538 ATACTTTTACCTCTTGTGTGAAAAGT 57.252 30.769 13.28 13.28 44.76 2.66
288 289 6.852664 ACTTTTACCTCTTGTGTGAAAAGTG 58.147 36.000 9.15 0.00 42.48 3.16
289 290 4.893424 TTACCTCTTGTGTGAAAAGTGC 57.107 40.909 0.00 0.00 0.00 4.40
290 291 2.722094 ACCTCTTGTGTGAAAAGTGCA 58.278 42.857 0.00 0.00 0.00 4.57
291 292 2.684881 ACCTCTTGTGTGAAAAGTGCAG 59.315 45.455 0.00 0.00 0.00 4.41
292 293 2.033801 CCTCTTGTGTGAAAAGTGCAGG 59.966 50.000 0.00 0.00 0.00 4.85
293 294 2.684881 CTCTTGTGTGAAAAGTGCAGGT 59.315 45.455 0.00 0.00 0.00 4.00
294 295 3.876914 CTCTTGTGTGAAAAGTGCAGGTA 59.123 43.478 0.00 0.00 0.00 3.08
295 296 3.876914 TCTTGTGTGAAAAGTGCAGGTAG 59.123 43.478 0.00 0.00 0.00 3.18
296 297 3.552132 TGTGTGAAAAGTGCAGGTAGA 57.448 42.857 0.00 0.00 0.00 2.59
297 298 3.879998 TGTGTGAAAAGTGCAGGTAGAA 58.120 40.909 0.00 0.00 0.00 2.10
298 299 3.876914 TGTGTGAAAAGTGCAGGTAGAAG 59.123 43.478 0.00 0.00 0.00 2.85
299 300 3.251004 GTGTGAAAAGTGCAGGTAGAAGG 59.749 47.826 0.00 0.00 0.00 3.46
300 301 2.814336 GTGAAAAGTGCAGGTAGAAGGG 59.186 50.000 0.00 0.00 0.00 3.95
301 302 2.708861 TGAAAAGTGCAGGTAGAAGGGA 59.291 45.455 0.00 0.00 0.00 4.20
302 303 2.861147 AAAGTGCAGGTAGAAGGGAC 57.139 50.000 0.00 0.00 0.00 4.46
303 304 0.984995 AAGTGCAGGTAGAAGGGACC 59.015 55.000 0.00 0.00 37.22 4.46
304 305 0.178903 AGTGCAGGTAGAAGGGACCA 60.179 55.000 0.00 0.00 39.65 4.02
305 306 0.912486 GTGCAGGTAGAAGGGACCAT 59.088 55.000 0.00 0.00 39.65 3.55
306 307 0.911769 TGCAGGTAGAAGGGACCATG 59.088 55.000 0.00 0.00 39.65 3.66
307 308 0.912486 GCAGGTAGAAGGGACCATGT 59.088 55.000 0.00 0.00 39.65 3.21
308 309 1.282157 GCAGGTAGAAGGGACCATGTT 59.718 52.381 0.00 0.00 39.65 2.71
309 310 2.504175 GCAGGTAGAAGGGACCATGTTA 59.496 50.000 0.00 0.00 39.65 2.41
310 311 3.054655 GCAGGTAGAAGGGACCATGTTAA 60.055 47.826 0.00 0.00 39.65 2.01
311 312 4.566907 GCAGGTAGAAGGGACCATGTTAAA 60.567 45.833 0.00 0.00 39.65 1.52
312 313 5.566469 CAGGTAGAAGGGACCATGTTAAAA 58.434 41.667 0.00 0.00 39.65 1.52
313 314 5.648092 CAGGTAGAAGGGACCATGTTAAAAG 59.352 44.000 0.00 0.00 39.65 2.27
314 315 5.312443 AGGTAGAAGGGACCATGTTAAAAGT 59.688 40.000 0.00 0.00 39.65 2.66
315 316 6.008331 GGTAGAAGGGACCATGTTAAAAGTT 58.992 40.000 0.00 0.00 36.91 2.66
316 317 6.150641 GGTAGAAGGGACCATGTTAAAAGTTC 59.849 42.308 0.00 0.00 36.91 3.01
317 318 5.077564 AGAAGGGACCATGTTAAAAGTTCC 58.922 41.667 0.00 0.00 0.00 3.62
318 319 3.774734 AGGGACCATGTTAAAAGTTCCC 58.225 45.455 0.00 0.00 35.24 3.97
319 320 3.141272 AGGGACCATGTTAAAAGTTCCCA 59.859 43.478 10.35 0.00 37.35 4.37
320 321 3.898741 GGGACCATGTTAAAAGTTCCCAA 59.101 43.478 0.00 0.00 35.13 4.12
321 322 4.021456 GGGACCATGTTAAAAGTTCCCAAG 60.021 45.833 0.00 0.00 35.13 3.61
322 323 4.587262 GGACCATGTTAAAAGTTCCCAAGT 59.413 41.667 0.00 0.00 0.00 3.16
323 324 5.771165 GGACCATGTTAAAAGTTCCCAAGTA 59.229 40.000 0.00 0.00 0.00 2.24
324 325 6.265876 GGACCATGTTAAAAGTTCCCAAGTAA 59.734 38.462 0.00 0.00 0.00 2.24
325 326 7.039293 GGACCATGTTAAAAGTTCCCAAGTAAT 60.039 37.037 0.00 0.00 0.00 1.89
326 327 8.257602 ACCATGTTAAAAGTTCCCAAGTAATT 57.742 30.769 0.00 0.00 0.00 1.40
327 328 8.710239 ACCATGTTAAAAGTTCCCAAGTAATTT 58.290 29.630 0.00 0.00 0.00 1.82
328 329 9.554395 CCATGTTAAAAGTTCCCAAGTAATTTT 57.446 29.630 0.00 0.00 0.00 1.82
335 336 9.902196 AAAAGTTCCCAAGTAATTTTGTATACG 57.098 29.630 0.00 0.00 0.00 3.06
336 337 7.080353 AGTTCCCAAGTAATTTTGTATACGC 57.920 36.000 0.00 0.00 0.00 4.42
337 338 6.655848 AGTTCCCAAGTAATTTTGTATACGCA 59.344 34.615 0.00 0.00 0.00 5.24
338 339 7.175293 AGTTCCCAAGTAATTTTGTATACGCAA 59.825 33.333 0.00 0.00 0.00 4.85
384 385 3.154589 CTGAATGCTCAGCTGCTCA 57.845 52.632 9.47 9.54 42.66 4.26
385 386 1.010580 CTGAATGCTCAGCTGCTCAG 58.989 55.000 9.47 11.26 42.66 3.35
386 387 0.392595 TGAATGCTCAGCTGCTCAGG 60.393 55.000 9.47 0.00 0.00 3.86
387 388 0.392729 GAATGCTCAGCTGCTCAGGT 60.393 55.000 9.47 1.58 40.20 4.00
393 394 4.385405 AGCTGCTCAGGTGTCGCC 62.385 66.667 0.00 0.00 37.82 5.54
404 405 4.652131 TGTCGCCCGCCCATTGTT 62.652 61.111 0.00 0.00 0.00 2.83
405 406 4.114997 GTCGCCCGCCCATTGTTG 62.115 66.667 0.00 0.00 0.00 3.33
409 410 2.996734 CCCGCCCATTGTTGCCTT 60.997 61.111 0.00 0.00 0.00 4.35
410 411 2.582493 CCCGCCCATTGTTGCCTTT 61.582 57.895 0.00 0.00 0.00 3.11
411 412 1.370810 CCGCCCATTGTTGCCTTTT 59.629 52.632 0.00 0.00 0.00 2.27
412 413 0.670239 CCGCCCATTGTTGCCTTTTC 60.670 55.000 0.00 0.00 0.00 2.29
413 414 0.033228 CGCCCATTGTTGCCTTTTCA 59.967 50.000 0.00 0.00 0.00 2.69
414 415 1.338011 CGCCCATTGTTGCCTTTTCAT 60.338 47.619 0.00 0.00 0.00 2.57
415 416 2.094286 CGCCCATTGTTGCCTTTTCATA 60.094 45.455 0.00 0.00 0.00 2.15
416 417 3.261580 GCCCATTGTTGCCTTTTCATAC 58.738 45.455 0.00 0.00 0.00 2.39
417 418 3.055891 GCCCATTGTTGCCTTTTCATACT 60.056 43.478 0.00 0.00 0.00 2.12
418 419 4.497300 CCCATTGTTGCCTTTTCATACTG 58.503 43.478 0.00 0.00 0.00 2.74
419 420 3.928375 CCATTGTTGCCTTTTCATACTGC 59.072 43.478 0.00 0.00 0.00 4.40
420 421 2.987413 TGTTGCCTTTTCATACTGCG 57.013 45.000 0.00 0.00 0.00 5.18
421 422 2.226330 TGTTGCCTTTTCATACTGCGT 58.774 42.857 0.00 0.00 0.00 5.24
422 423 3.403968 TGTTGCCTTTTCATACTGCGTA 58.596 40.909 0.00 0.00 0.00 4.42
423 424 3.187637 TGTTGCCTTTTCATACTGCGTAC 59.812 43.478 0.00 0.00 0.00 3.67
424 425 1.996898 TGCCTTTTCATACTGCGTACG 59.003 47.619 11.84 11.84 0.00 3.67
425 426 2.264813 GCCTTTTCATACTGCGTACGA 58.735 47.619 21.65 3.19 0.00 3.43
426 427 2.281762 GCCTTTTCATACTGCGTACGAG 59.718 50.000 21.65 15.48 0.00 4.18
427 428 2.858344 CCTTTTCATACTGCGTACGAGG 59.142 50.000 21.65 12.73 0.00 4.63
428 429 3.428452 CCTTTTCATACTGCGTACGAGGA 60.428 47.826 21.65 10.73 0.00 3.71
429 430 3.853831 TTTCATACTGCGTACGAGGAA 57.146 42.857 21.65 8.60 0.00 3.36
430 431 4.380841 TTTCATACTGCGTACGAGGAAT 57.619 40.909 21.65 8.78 0.00 3.01
431 432 4.380841 TTCATACTGCGTACGAGGAATT 57.619 40.909 21.65 0.00 0.00 2.17
432 433 3.702330 TCATACTGCGTACGAGGAATTG 58.298 45.455 21.65 8.67 0.00 2.32
433 434 3.129813 TCATACTGCGTACGAGGAATTGT 59.870 43.478 21.65 8.21 0.00 2.71
434 435 2.450609 ACTGCGTACGAGGAATTGTT 57.549 45.000 21.65 0.00 0.00 2.83
435 436 2.762745 ACTGCGTACGAGGAATTGTTT 58.237 42.857 21.65 0.00 0.00 2.83
436 437 2.478894 ACTGCGTACGAGGAATTGTTTG 59.521 45.455 21.65 0.00 0.00 2.93
437 438 1.801771 TGCGTACGAGGAATTGTTTGG 59.198 47.619 21.65 0.00 0.00 3.28
438 439 1.465187 GCGTACGAGGAATTGTTTGGC 60.465 52.381 21.65 0.00 0.00 4.52
439 440 2.073816 CGTACGAGGAATTGTTTGGCT 58.926 47.619 10.44 0.00 0.00 4.75
440 441 2.093783 CGTACGAGGAATTGTTTGGCTC 59.906 50.000 10.44 0.00 0.00 4.70
441 442 2.568623 ACGAGGAATTGTTTGGCTCT 57.431 45.000 0.00 0.00 0.00 4.09
442 443 2.427506 ACGAGGAATTGTTTGGCTCTC 58.572 47.619 0.00 0.00 0.00 3.20
443 444 2.224523 ACGAGGAATTGTTTGGCTCTCA 60.225 45.455 0.00 0.00 0.00 3.27
444 445 3.012518 CGAGGAATTGTTTGGCTCTCAT 58.987 45.455 0.00 0.00 0.00 2.90
445 446 3.441572 CGAGGAATTGTTTGGCTCTCATT 59.558 43.478 0.00 0.00 0.00 2.57
446 447 4.082571 CGAGGAATTGTTTGGCTCTCATTT 60.083 41.667 0.00 0.00 0.00 2.32
447 448 5.143376 AGGAATTGTTTGGCTCTCATTTG 57.857 39.130 0.00 0.00 0.00 2.32
448 449 4.834496 AGGAATTGTTTGGCTCTCATTTGA 59.166 37.500 0.00 0.00 0.00 2.69
449 450 5.482878 AGGAATTGTTTGGCTCTCATTTGAT 59.517 36.000 0.00 0.00 0.00 2.57
450 451 5.809051 GGAATTGTTTGGCTCTCATTTGATC 59.191 40.000 0.00 0.00 0.00 2.92
451 452 4.789012 TTGTTTGGCTCTCATTTGATCC 57.211 40.909 0.00 0.00 0.00 3.36
452 453 3.091545 TGTTTGGCTCTCATTTGATCCC 58.908 45.455 0.00 0.00 0.00 3.85
453 454 3.245371 TGTTTGGCTCTCATTTGATCCCT 60.245 43.478 0.00 0.00 0.00 4.20
551 1026 5.847515 TCGTCGTACATGTTAGTATATTGCG 59.152 40.000 2.30 0.00 0.00 4.85
552 1027 5.058856 CGTCGTACATGTTAGTATATTGCGG 59.941 44.000 2.30 0.00 0.00 5.69
553 1028 5.916883 GTCGTACATGTTAGTATATTGCGGT 59.083 40.000 2.30 0.00 0.00 5.68
572 1060 4.435651 GCGGTCACTTAGTTTAATGCTGTC 60.436 45.833 0.00 0.00 0.00 3.51
633 2493 1.068250 GCCTCGACCTGCTCATACC 59.932 63.158 0.00 0.00 0.00 2.73
662 2528 1.303282 CCACCCCCAACTTAGCTCC 59.697 63.158 0.00 0.00 0.00 4.70
690 2559 0.099968 CCATGGCAGATGCTCAAACG 59.900 55.000 0.00 0.00 41.70 3.60
739 2608 0.188342 GGGAGGAGGAGATGAGAGCT 59.812 60.000 0.00 0.00 0.00 4.09
748 2617 3.328931 AGGAGATGAGAGCTTTGTTCCAA 59.671 43.478 0.00 0.00 0.00 3.53
783 2652 0.035056 GGGTGCTGTATCAAGGCTGT 60.035 55.000 0.00 0.00 0.00 4.40
862 2734 1.753078 CCCGACGACATCCTCCTCA 60.753 63.158 0.00 0.00 0.00 3.86
870 2742 2.357952 CGACATCCTCCTCATCACGTAA 59.642 50.000 0.00 0.00 0.00 3.18
975 2847 4.351054 CTGCTCACCCACCACCCC 62.351 72.222 0.00 0.00 0.00 4.95
1019 2891 4.208686 GCCCTACCGTCAGCTCCG 62.209 72.222 0.00 0.00 0.00 4.63
1080 2952 0.986019 TCTCCACCCATATGCCGGTT 60.986 55.000 1.90 0.00 0.00 4.44
1174 3046 1.066430 TCGTGTCCTTATGGCACTTCC 60.066 52.381 15.28 0.00 37.84 3.46
1196 3803 7.133133 TCCTCTACAAGGTAAACAAGAACTT 57.867 36.000 0.00 0.00 46.32 2.66
1231 3838 5.343307 AGCATTTGAGTTGTTTTCCAAGT 57.657 34.783 0.00 0.00 39.46 3.16
1476 5646 6.506500 CTCAAAAGCATACCAATCAACTCT 57.493 37.500 0.00 0.00 0.00 3.24
1665 5905 9.608617 CATCTTCATTACTGTCATGATTAATGC 57.391 33.333 19.91 2.07 36.11 3.56
1666 5906 8.969260 TCTTCATTACTGTCATGATTAATGCT 57.031 30.769 19.91 0.00 36.11 3.79
1703 6083 1.446792 CACTCGATGCAGAAGCCGT 60.447 57.895 0.00 0.00 41.13 5.68
1766 6176 2.094234 GTGCAACCCAAATGTATGTCCC 60.094 50.000 0.00 0.00 0.00 4.46
1797 6207 3.558505 TGTGAAAGACTACGTACTTCGC 58.441 45.455 0.00 0.45 44.19 4.70
1837 6251 6.670077 TGTTTTGTTTTCATTTACTTGGCC 57.330 33.333 0.00 0.00 0.00 5.36
1840 6254 6.732896 TTTGTTTTCATTTACTTGGCCCTA 57.267 33.333 0.00 0.00 0.00 3.53
1866 6280 3.977312 TGAGATACTCCCTCCTTTTCGA 58.023 45.455 0.00 0.00 0.00 3.71
1873 6287 9.155785 AGATACTCCCTCCTTTTCGATTTATAA 57.844 33.333 0.00 0.00 0.00 0.98
1910 6324 2.571653 TCTCACCAACCAAGGTAGATGG 59.428 50.000 6.86 6.86 40.77 3.51
1920 6334 2.567169 CAAGGTAGATGGTGAGTGGTGA 59.433 50.000 0.00 0.00 0.00 4.02
1924 6338 4.289672 AGGTAGATGGTGAGTGGTGAAATT 59.710 41.667 0.00 0.00 0.00 1.82
1925 6339 5.010282 GGTAGATGGTGAGTGGTGAAATTT 58.990 41.667 0.00 0.00 0.00 1.82
1948 6363 6.852858 TTTTTATAGTTTGCAAAAGCACCC 57.147 33.333 14.67 0.00 0.00 4.61
1971 6386 6.295236 CCCAATTAATGCTCTTGTTTTCCTCA 60.295 38.462 0.00 0.00 0.00 3.86
2098 6513 5.393787 CCTTGAAATCTGAACATGTGATGGG 60.394 44.000 0.00 0.00 33.60 4.00
2134 6549 9.448438 AATTGAGCCTTATAAAATGGAAAAACC 57.552 29.630 0.00 0.00 39.54 3.27
2180 6595 2.174854 GGCTGGTTGTAATGGGGAGTAT 59.825 50.000 0.00 0.00 0.00 2.12
2228 6643 4.197750 ACTAGTGTGTGATACTACCTCCG 58.802 47.826 0.00 0.00 0.00 4.63
2231 6646 4.592942 AGTGTGTGATACTACCTCCGTAA 58.407 43.478 0.00 0.00 0.00 3.18
2241 6656 7.832685 TGATACTACCTCCGTAATGCATAGTAT 59.167 37.037 11.08 11.08 37.18 2.12
2247 6662 7.548097 ACCTCCGTAATGCATAGTATCATAAG 58.452 38.462 0.00 0.00 0.00 1.73
2248 6663 7.178628 ACCTCCGTAATGCATAGTATCATAAGT 59.821 37.037 0.00 0.00 0.00 2.24
2284 6699 4.633175 TGCCTTATTAATTGCCATGCATG 58.367 39.130 20.19 20.19 38.76 4.06
2292 6707 2.151881 TTGCCATGCATGACACAAAC 57.848 45.000 28.31 8.36 38.76 2.93
2296 6711 2.489329 GCCATGCATGACACAAACTAGT 59.511 45.455 28.31 0.00 0.00 2.57
2297 6712 3.671433 GCCATGCATGACACAAACTAGTG 60.671 47.826 28.31 7.28 44.93 2.74
2298 6713 3.119743 CCATGCATGACACAAACTAGTGG 60.120 47.826 28.31 3.32 43.72 4.00
2308 6723 6.714810 TGACACAAACTAGTGGAGCATTTAAT 59.285 34.615 0.00 0.00 43.72 1.40
2346 6762 9.987726 TCATGATATGATACTACATCCTCTCTT 57.012 33.333 0.00 0.00 33.59 2.85
2352 6768 6.673583 TGATACTACATCCTCTCTTTCCTCA 58.326 40.000 0.00 0.00 0.00 3.86
2366 6782 7.919690 TCTCTTTCCTCATTTAATTATGTGCG 58.080 34.615 0.00 0.00 0.00 5.34
2367 6783 6.494842 TCTTTCCTCATTTAATTATGTGCGC 58.505 36.000 0.00 0.00 0.00 6.09
2368 6784 5.826601 TTCCTCATTTAATTATGTGCGCA 57.173 34.783 5.66 5.66 0.00 6.09
2369 6785 6.389830 TTCCTCATTTAATTATGTGCGCAT 57.610 33.333 15.91 18.22 39.03 4.73
2370 6786 6.000891 TCCTCATTTAATTATGTGCGCATC 57.999 37.500 17.64 8.33 36.58 3.91
2372 6788 6.207221 TCCTCATTTAATTATGTGCGCATCAT 59.793 34.615 17.64 20.48 36.58 2.45
2373 6789 6.525628 CCTCATTTAATTATGTGCGCATCATC 59.474 38.462 22.74 8.54 36.58 2.92
2376 6792 5.764487 TTAATTATGTGCGCATCATCCAA 57.236 34.783 22.74 15.55 36.58 3.53
2377 6793 4.652421 AATTATGTGCGCATCATCCAAA 57.348 36.364 22.74 15.01 36.58 3.28
2378 6794 4.652421 ATTATGTGCGCATCATCCAAAA 57.348 36.364 22.74 14.75 36.58 2.44
2380 6796 5.764487 TTATGTGCGCATCATCCAAAATA 57.236 34.783 22.74 6.89 36.58 1.40
2381 6797 4.859304 ATGTGCGCATCATCCAAAATAT 57.141 36.364 15.91 0.00 0.00 1.28
2382 6798 4.652421 TGTGCGCATCATCCAAAATATT 57.348 36.364 15.91 0.00 0.00 1.28
2387 6803 6.697019 GTGCGCATCATCCAAAATATTTAGTT 59.303 34.615 15.91 0.00 0.00 2.24
2388 6804 6.696583 TGCGCATCATCCAAAATATTTAGTTG 59.303 34.615 5.66 2.65 0.00 3.16
2389 6805 6.144402 GCGCATCATCCAAAATATTTAGTTGG 59.856 38.462 0.30 10.10 42.70 3.77
2390 6806 6.144402 CGCATCATCCAAAATATTTAGTTGGC 59.856 38.462 11.17 6.51 41.38 4.52
2398 6815 6.762187 CCAAAATATTTAGTTGGCATGCATGA 59.238 34.615 30.64 7.50 35.72 3.07
2402 6819 8.413309 AATATTTAGTTGGCATGCATGATACT 57.587 30.769 30.64 26.11 0.00 2.12
2403 6820 9.519191 AATATTTAGTTGGCATGCATGATACTA 57.481 29.630 30.64 25.19 0.00 1.82
2404 6821 6.618287 TTTAGTTGGCATGCATGATACTAC 57.382 37.500 30.64 22.16 0.00 2.73
2410 6827 6.112927 TGGCATGCATGATACTACTTATGA 57.887 37.500 30.64 0.00 0.00 2.15
2414 6831 7.984050 GGCATGCATGATACTACTTATGATACT 59.016 37.037 30.64 0.00 0.00 2.12
2422 6839 9.736414 TGATACTACTTATGATACTCCCACTAC 57.264 37.037 0.00 0.00 0.00 2.73
2423 6840 9.736414 GATACTACTTATGATACTCCCACTACA 57.264 37.037 0.00 0.00 0.00 2.74
2437 6854 2.073816 CACTACAACCAGCCTAAACCG 58.926 52.381 0.00 0.00 0.00 4.44
2438 6855 1.002773 ACTACAACCAGCCTAAACCGG 59.997 52.381 0.00 0.00 0.00 5.28
2442 6859 1.957877 CAACCAGCCTAAACCGGAAAA 59.042 47.619 9.46 0.00 0.00 2.29
2463 6880 7.012799 GGAAAAGAGGGAGTATGAACAATCATC 59.987 40.741 0.00 0.00 42.75 2.92
2525 6942 6.338146 TGCATAGTAATGTGAACTACTCCAC 58.662 40.000 0.00 0.00 35.38 4.02
2527 6944 6.561614 CATAGTAATGTGAACTACTCCACGT 58.438 40.000 0.00 0.00 36.15 4.49
2528 6945 7.680350 GCATAGTAATGTGAACTACTCCACGTA 60.680 40.741 0.00 0.00 36.15 3.57
2529 6946 6.770746 AGTAATGTGAACTACTCCACGTAT 57.229 37.500 0.00 0.00 36.15 3.06
2530 6947 6.561614 AGTAATGTGAACTACTCCACGTATG 58.438 40.000 0.00 0.00 36.15 2.39
2531 6948 5.401531 AATGTGAACTACTCCACGTATGT 57.598 39.130 0.00 0.00 36.15 2.29
2532 6949 4.168922 TGTGAACTACTCCACGTATGTG 57.831 45.455 8.18 8.18 46.00 3.21
2563 6982 8.463930 TTTAACTTTGAAGATGGTTGATGACT 57.536 30.769 0.00 0.00 0.00 3.41
2567 6986 7.907389 ACTTTGAAGATGGTTGATGACTACTA 58.093 34.615 0.00 0.00 0.00 1.82
2568 6987 8.037758 ACTTTGAAGATGGTTGATGACTACTAG 58.962 37.037 0.00 0.00 0.00 2.57
2569 6988 7.482169 TTGAAGATGGTTGATGACTACTAGT 57.518 36.000 0.00 0.00 0.00 2.57
2572 6993 4.896482 AGATGGTTGATGACTACTAGTCCC 59.104 45.833 12.79 7.42 44.44 4.46
2579 7000 2.176889 TGACTACTAGTCCCTTGGTGC 58.823 52.381 12.79 0.00 44.44 5.01
2580 7001 2.225293 TGACTACTAGTCCCTTGGTGCT 60.225 50.000 12.79 0.00 44.44 4.40
2625 7046 2.997897 GGAGTGGGCGTGGAGACT 60.998 66.667 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.039624 GGGTCCCAGCAGAGAGGA 59.960 66.667 1.78 0.00 0.00 3.71
4 5 1.270414 ATGTGGGTCCCAGCAGAGAG 61.270 60.000 12.21 0.00 32.34 3.20
5 6 1.229625 ATGTGGGTCCCAGCAGAGA 60.230 57.895 12.21 0.00 32.34 3.10
7 8 0.546507 TACATGTGGGTCCCAGCAGA 60.547 55.000 12.21 0.00 32.34 4.26
8 9 0.327924 TTACATGTGGGTCCCAGCAG 59.672 55.000 12.21 6.35 32.34 4.24
9 10 0.327924 CTTACATGTGGGTCCCAGCA 59.672 55.000 12.21 13.04 32.34 4.41
19 20 2.571653 TCCTTCCTCCCACTTACATGTG 59.428 50.000 9.11 0.00 37.66 3.21
20 21 2.840651 CTCCTTCCTCCCACTTACATGT 59.159 50.000 2.69 2.69 0.00 3.21
21 22 2.171448 CCTCCTTCCTCCCACTTACATG 59.829 54.545 0.00 0.00 0.00 3.21
22 23 2.225908 ACCTCCTTCCTCCCACTTACAT 60.226 50.000 0.00 0.00 0.00 2.29
23 24 1.151413 ACCTCCTTCCTCCCACTTACA 59.849 52.381 0.00 0.00 0.00 2.41
24 25 1.832366 GACCTCCTTCCTCCCACTTAC 59.168 57.143 0.00 0.00 0.00 2.34
25 26 1.435563 TGACCTCCTTCCTCCCACTTA 59.564 52.381 0.00 0.00 0.00 2.24
26 27 0.193574 TGACCTCCTTCCTCCCACTT 59.806 55.000 0.00 0.00 0.00 3.16
27 28 0.419459 ATGACCTCCTTCCTCCCACT 59.581 55.000 0.00 0.00 0.00 4.00
28 29 0.543749 CATGACCTCCTTCCTCCCAC 59.456 60.000 0.00 0.00 0.00 4.61
29 30 0.119155 ACATGACCTCCTTCCTCCCA 59.881 55.000 0.00 0.00 0.00 4.37
30 31 1.210722 GAACATGACCTCCTTCCTCCC 59.789 57.143 0.00 0.00 0.00 4.30
31 32 1.210722 GGAACATGACCTCCTTCCTCC 59.789 57.143 0.00 0.00 31.11 4.30
32 33 1.134670 CGGAACATGACCTCCTTCCTC 60.135 57.143 0.00 0.00 31.53 3.71
33 34 0.905357 CGGAACATGACCTCCTTCCT 59.095 55.000 0.00 0.00 31.53 3.36
34 35 0.902531 TCGGAACATGACCTCCTTCC 59.097 55.000 0.00 0.00 0.00 3.46
35 36 2.483889 GGATCGGAACATGACCTCCTTC 60.484 54.545 0.00 2.79 0.00 3.46
36 37 1.486726 GGATCGGAACATGACCTCCTT 59.513 52.381 0.00 0.00 0.00 3.36
37 38 1.123928 GGATCGGAACATGACCTCCT 58.876 55.000 0.00 0.00 0.00 3.69
38 39 0.106894 GGGATCGGAACATGACCTCC 59.893 60.000 0.00 6.58 0.00 4.30
39 40 0.830648 TGGGATCGGAACATGACCTC 59.169 55.000 0.00 0.00 0.00 3.85
40 41 0.833287 CTGGGATCGGAACATGACCT 59.167 55.000 0.00 0.00 0.00 3.85
41 42 0.815615 GCTGGGATCGGAACATGACC 60.816 60.000 0.00 1.31 0.00 4.02
42 43 0.179000 AGCTGGGATCGGAACATGAC 59.821 55.000 0.00 0.00 0.00 3.06
43 44 0.465705 GAGCTGGGATCGGAACATGA 59.534 55.000 0.00 0.00 0.00 3.07
44 45 0.178767 TGAGCTGGGATCGGAACATG 59.821 55.000 0.00 0.00 0.00 3.21
45 46 0.467384 CTGAGCTGGGATCGGAACAT 59.533 55.000 0.00 0.00 0.00 2.71
46 47 1.900351 CTGAGCTGGGATCGGAACA 59.100 57.895 0.00 0.00 0.00 3.18
47 48 1.522580 GCTGAGCTGGGATCGGAAC 60.523 63.158 0.00 0.00 0.00 3.62
48 49 2.735772 GGCTGAGCTGGGATCGGAA 61.736 63.158 3.72 0.00 0.00 4.30
49 50 3.157252 GGCTGAGCTGGGATCGGA 61.157 66.667 3.72 0.00 0.00 4.55
50 51 4.598894 CGGCTGAGCTGGGATCGG 62.599 72.222 5.09 0.00 0.00 4.18
83 84 4.728102 ATCGCCGACGTGCCGAAA 62.728 61.111 0.00 0.00 41.18 3.46
84 85 4.728102 AATCGCCGACGTGCCGAA 62.728 61.111 0.00 0.00 41.18 4.30
85 86 4.728102 AAATCGCCGACGTGCCGA 62.728 61.111 0.00 0.00 41.18 5.54
86 87 4.499023 CAAATCGCCGACGTGCCG 62.499 66.667 0.00 0.00 41.18 5.69
87 88 4.811761 GCAAATCGCCGACGTGCC 62.812 66.667 11.66 0.00 41.18 5.01
96 97 1.386412 CATTTTGACGTGGCAAATCGC 59.614 47.619 1.00 0.00 37.57 4.58
97 98 1.386412 GCATTTTGACGTGGCAAATCG 59.614 47.619 1.00 0.00 37.57 3.34
98 99 1.386412 CGCATTTTGACGTGGCAAATC 59.614 47.619 1.00 0.00 37.57 2.17
99 100 1.000827 TCGCATTTTGACGTGGCAAAT 60.001 42.857 1.00 0.00 37.57 2.32
100 101 0.382158 TCGCATTTTGACGTGGCAAA 59.618 45.000 0.00 0.00 36.08 3.68
101 102 0.595588 ATCGCATTTTGACGTGGCAA 59.404 45.000 0.00 0.00 0.00 4.52
102 103 0.167908 GATCGCATTTTGACGTGGCA 59.832 50.000 0.00 0.00 0.00 4.92
103 104 0.167908 TGATCGCATTTTGACGTGGC 59.832 50.000 0.00 0.00 0.00 5.01
104 105 2.610219 TTGATCGCATTTTGACGTGG 57.390 45.000 0.00 0.00 0.00 4.94
105 106 5.499268 AATTTTGATCGCATTTTGACGTG 57.501 34.783 0.00 0.00 0.00 4.49
106 107 6.354080 CAAAATTTTGATCGCATTTTGACGT 58.646 32.000 23.72 0.00 45.03 4.34
107 108 5.278827 GCAAAATTTTGATCGCATTTTGACG 59.721 36.000 30.40 11.37 45.03 4.35
108 109 6.365050 AGCAAAATTTTGATCGCATTTTGAC 58.635 32.000 30.40 19.95 45.03 3.18
109 110 6.542574 AGCAAAATTTTGATCGCATTTTGA 57.457 29.167 30.40 0.00 45.03 2.69
110 111 8.011106 ACTTAGCAAAATTTTGATCGCATTTTG 58.989 29.630 30.40 21.39 45.02 2.44
111 112 8.011106 CACTTAGCAAAATTTTGATCGCATTTT 58.989 29.630 30.40 6.37 40.55 1.82
112 113 7.171337 ACACTTAGCAAAATTTTGATCGCATTT 59.829 29.630 30.40 8.73 40.55 2.32
113 114 6.646240 ACACTTAGCAAAATTTTGATCGCATT 59.354 30.769 30.40 10.14 40.55 3.56
114 115 6.158598 ACACTTAGCAAAATTTTGATCGCAT 58.841 32.000 30.40 11.20 40.55 4.73
115 116 5.527951 ACACTTAGCAAAATTTTGATCGCA 58.472 33.333 30.40 10.22 40.55 5.10
116 117 6.452244 AACACTTAGCAAAATTTTGATCGC 57.548 33.333 30.40 17.02 40.55 4.58
157 158 4.109050 GACACTTTGCATCGAACCAAAAA 58.891 39.130 12.84 0.45 31.29 1.94
158 159 3.129462 TGACACTTTGCATCGAACCAAAA 59.871 39.130 12.84 1.89 31.29 2.44
159 160 2.685388 TGACACTTTGCATCGAACCAAA 59.315 40.909 11.70 11.70 0.00 3.28
160 161 2.032799 GTGACACTTTGCATCGAACCAA 59.967 45.455 0.00 0.00 0.00 3.67
161 162 1.601903 GTGACACTTTGCATCGAACCA 59.398 47.619 0.00 0.00 0.00 3.67
162 163 1.601903 TGTGACACTTTGCATCGAACC 59.398 47.619 7.20 0.00 0.00 3.62
163 164 3.542712 ATGTGACACTTTGCATCGAAC 57.457 42.857 7.20 0.00 0.00 3.95
164 165 4.566545 AAATGTGACACTTTGCATCGAA 57.433 36.364 7.20 0.00 0.00 3.71
165 166 5.878332 ATAAATGTGACACTTTGCATCGA 57.122 34.783 7.20 0.00 0.00 3.59
166 167 7.750458 ACTTTATAAATGTGACACTTTGCATCG 59.250 33.333 7.20 0.00 0.00 3.84
167 168 8.853345 CACTTTATAAATGTGACACTTTGCATC 58.147 33.333 16.45 0.00 33.95 3.91
168 169 8.575589 TCACTTTATAAATGTGACACTTTGCAT 58.424 29.630 18.52 6.90 36.03 3.96
169 170 7.935520 TCACTTTATAAATGTGACACTTTGCA 58.064 30.769 18.52 0.00 36.03 4.08
170 171 8.853345 CATCACTTTATAAATGTGACACTTTGC 58.147 33.333 21.98 0.00 42.43 3.68
171 172 9.345517 CCATCACTTTATAAATGTGACACTTTG 57.654 33.333 21.98 17.64 42.43 2.77
172 173 9.077885 ACCATCACTTTATAAATGTGACACTTT 57.922 29.630 21.98 3.92 42.43 2.66
173 174 8.635765 ACCATCACTTTATAAATGTGACACTT 57.364 30.769 21.98 11.18 42.43 3.16
174 175 8.635765 AACCATCACTTTATAAATGTGACACT 57.364 30.769 21.98 11.41 42.43 3.55
175 176 9.691362 AAAACCATCACTTTATAAATGTGACAC 57.309 29.630 21.98 0.00 42.43 3.67
178 179 9.921637 GGAAAAACCATCACTTTATAAATGTGA 57.078 29.630 21.87 21.87 43.53 3.58
179 180 8.859156 CGGAAAAACCATCACTTTATAAATGTG 58.141 33.333 15.78 15.78 38.90 3.21
180 181 8.798402 TCGGAAAAACCATCACTTTATAAATGT 58.202 29.630 0.00 0.00 38.90 2.71
181 182 9.289303 CTCGGAAAAACCATCACTTTATAAATG 57.711 33.333 0.00 0.59 38.90 2.32
182 183 9.238368 TCTCGGAAAAACCATCACTTTATAAAT 57.762 29.630 0.00 0.00 38.90 1.40
183 184 8.624367 TCTCGGAAAAACCATCACTTTATAAA 57.376 30.769 0.00 0.00 38.90 1.40
184 185 7.148306 GCTCTCGGAAAAACCATCACTTTATAA 60.148 37.037 0.00 0.00 38.90 0.98
185 186 6.315393 GCTCTCGGAAAAACCATCACTTTATA 59.685 38.462 0.00 0.00 38.90 0.98
186 187 5.123979 GCTCTCGGAAAAACCATCACTTTAT 59.876 40.000 0.00 0.00 38.90 1.40
187 188 4.454504 GCTCTCGGAAAAACCATCACTTTA 59.545 41.667 0.00 0.00 38.90 1.85
188 189 3.253432 GCTCTCGGAAAAACCATCACTTT 59.747 43.478 0.00 0.00 38.90 2.66
189 190 2.814336 GCTCTCGGAAAAACCATCACTT 59.186 45.455 0.00 0.00 38.90 3.16
190 191 2.039084 AGCTCTCGGAAAAACCATCACT 59.961 45.455 0.00 0.00 38.90 3.41
191 192 2.427506 AGCTCTCGGAAAAACCATCAC 58.572 47.619 0.00 0.00 38.90 3.06
192 193 2.859165 AGCTCTCGGAAAAACCATCA 57.141 45.000 0.00 0.00 38.90 3.07
193 194 4.271291 GTCATAGCTCTCGGAAAAACCATC 59.729 45.833 0.00 0.00 38.90 3.51
194 195 4.192317 GTCATAGCTCTCGGAAAAACCAT 58.808 43.478 0.00 0.00 38.90 3.55
195 196 3.596214 GTCATAGCTCTCGGAAAAACCA 58.404 45.455 0.00 0.00 38.90 3.67
196 197 2.603560 CGTCATAGCTCTCGGAAAAACC 59.396 50.000 0.00 0.00 0.00 3.27
197 198 2.029365 GCGTCATAGCTCTCGGAAAAAC 59.971 50.000 0.00 0.00 0.00 2.43
198 199 2.094182 AGCGTCATAGCTCTCGGAAAAA 60.094 45.455 0.00 0.00 45.67 1.94
199 200 1.476891 AGCGTCATAGCTCTCGGAAAA 59.523 47.619 0.00 0.00 45.67 2.29
200 201 1.103803 AGCGTCATAGCTCTCGGAAA 58.896 50.000 0.00 0.00 45.67 3.13
201 202 1.963172 TAGCGTCATAGCTCTCGGAA 58.037 50.000 0.00 0.00 45.67 4.30
202 203 1.963172 TTAGCGTCATAGCTCTCGGA 58.037 50.000 0.00 0.00 45.67 4.55
203 204 2.030717 ACATTAGCGTCATAGCTCTCGG 60.031 50.000 0.00 0.00 45.67 4.63
204 205 2.976509 CACATTAGCGTCATAGCTCTCG 59.023 50.000 0.00 0.00 45.67 4.04
205 206 3.243569 ACCACATTAGCGTCATAGCTCTC 60.244 47.826 0.00 0.00 45.67 3.20
206 207 2.695666 ACCACATTAGCGTCATAGCTCT 59.304 45.455 0.00 0.00 45.67 4.09
207 208 2.797156 CACCACATTAGCGTCATAGCTC 59.203 50.000 0.00 0.00 45.67 4.09
209 210 1.867233 CCACCACATTAGCGTCATAGC 59.133 52.381 0.00 0.00 37.41 2.97
210 211 3.179443 ACCACCACATTAGCGTCATAG 57.821 47.619 0.00 0.00 0.00 2.23
211 212 3.196901 AGAACCACCACATTAGCGTCATA 59.803 43.478 0.00 0.00 0.00 2.15
212 213 2.027192 AGAACCACCACATTAGCGTCAT 60.027 45.455 0.00 0.00 0.00 3.06
213 214 1.346395 AGAACCACCACATTAGCGTCA 59.654 47.619 0.00 0.00 0.00 4.35
214 215 1.732259 CAGAACCACCACATTAGCGTC 59.268 52.381 0.00 0.00 0.00 5.19
215 216 1.071699 ACAGAACCACCACATTAGCGT 59.928 47.619 0.00 0.00 0.00 5.07
216 217 1.464608 CACAGAACCACCACATTAGCG 59.535 52.381 0.00 0.00 0.00 4.26
217 218 1.200020 GCACAGAACCACCACATTAGC 59.800 52.381 0.00 0.00 0.00 3.09
218 219 2.503331 TGCACAGAACCACCACATTAG 58.497 47.619 0.00 0.00 0.00 1.73
219 220 2.647683 TGCACAGAACCACCACATTA 57.352 45.000 0.00 0.00 0.00 1.90
220 221 1.999648 ATGCACAGAACCACCACATT 58.000 45.000 0.00 0.00 0.00 2.71
221 222 1.999648 AATGCACAGAACCACCACAT 58.000 45.000 0.00 0.00 0.00 3.21
222 223 1.774110 AAATGCACAGAACCACCACA 58.226 45.000 0.00 0.00 0.00 4.17
223 224 2.888834 AAAATGCACAGAACCACCAC 57.111 45.000 0.00 0.00 0.00 4.16
224 225 3.561143 AGTAAAATGCACAGAACCACCA 58.439 40.909 0.00 0.00 0.00 4.17
225 226 3.821033 AGAGTAAAATGCACAGAACCACC 59.179 43.478 0.00 0.00 0.00 4.61
226 227 4.757149 AGAGAGTAAAATGCACAGAACCAC 59.243 41.667 0.00 0.00 0.00 4.16
227 228 4.973168 AGAGAGTAAAATGCACAGAACCA 58.027 39.130 0.00 0.00 0.00 3.67
228 229 4.997395 TGAGAGAGTAAAATGCACAGAACC 59.003 41.667 0.00 0.00 0.00 3.62
229 230 6.545504 TTGAGAGAGTAAAATGCACAGAAC 57.454 37.500 0.00 0.00 0.00 3.01
230 231 6.017109 GGTTTGAGAGAGTAAAATGCACAGAA 60.017 38.462 0.00 0.00 0.00 3.02
231 232 5.470098 GGTTTGAGAGAGTAAAATGCACAGA 59.530 40.000 0.00 0.00 0.00 3.41
232 233 5.335191 GGGTTTGAGAGAGTAAAATGCACAG 60.335 44.000 0.00 0.00 0.00 3.66
233 234 4.518970 GGGTTTGAGAGAGTAAAATGCACA 59.481 41.667 0.00 0.00 0.00 4.57
234 235 4.518970 TGGGTTTGAGAGAGTAAAATGCAC 59.481 41.667 0.00 0.00 0.00 4.57
235 236 4.724399 TGGGTTTGAGAGAGTAAAATGCA 58.276 39.130 0.00 0.00 0.00 3.96
236 237 5.904362 ATGGGTTTGAGAGAGTAAAATGC 57.096 39.130 0.00 0.00 0.00 3.56
253 254 9.847224 CACAAGAGGTAAAAGTATATAATGGGT 57.153 33.333 0.00 0.00 0.00 4.51
254 255 9.847224 ACACAAGAGGTAAAAGTATATAATGGG 57.153 33.333 0.00 0.00 0.00 4.00
261 262 9.841295 ACTTTTCACACAAGAGGTAAAAGTATA 57.159 29.630 8.73 0.00 42.32 1.47
262 263 8.621286 CACTTTTCACACAAGAGGTAAAAGTAT 58.379 33.333 9.81 0.00 42.27 2.12
263 264 7.414762 GCACTTTTCACACAAGAGGTAAAAGTA 60.415 37.037 9.81 0.00 42.27 2.24
264 265 6.625081 GCACTTTTCACACAAGAGGTAAAAGT 60.625 38.462 0.00 0.00 43.95 2.66
265 266 5.743872 GCACTTTTCACACAAGAGGTAAAAG 59.256 40.000 0.00 0.00 38.97 2.27
266 267 5.184096 TGCACTTTTCACACAAGAGGTAAAA 59.816 36.000 0.00 0.00 0.00 1.52
267 268 4.702612 TGCACTTTTCACACAAGAGGTAAA 59.297 37.500 0.00 0.00 0.00 2.01
268 269 4.265893 TGCACTTTTCACACAAGAGGTAA 58.734 39.130 0.00 0.00 0.00 2.85
269 270 3.876914 CTGCACTTTTCACACAAGAGGTA 59.123 43.478 0.00 0.00 0.00 3.08
270 271 2.684881 CTGCACTTTTCACACAAGAGGT 59.315 45.455 0.00 0.00 0.00 3.85
271 272 2.033801 CCTGCACTTTTCACACAAGAGG 59.966 50.000 0.00 0.00 0.00 3.69
272 273 2.684881 ACCTGCACTTTTCACACAAGAG 59.315 45.455 0.00 0.00 0.00 2.85
273 274 2.722094 ACCTGCACTTTTCACACAAGA 58.278 42.857 0.00 0.00 0.00 3.02
274 275 3.876914 TCTACCTGCACTTTTCACACAAG 59.123 43.478 0.00 0.00 0.00 3.16
275 276 3.879998 TCTACCTGCACTTTTCACACAA 58.120 40.909 0.00 0.00 0.00 3.33
276 277 3.552132 TCTACCTGCACTTTTCACACA 57.448 42.857 0.00 0.00 0.00 3.72
277 278 3.251004 CCTTCTACCTGCACTTTTCACAC 59.749 47.826 0.00 0.00 0.00 3.82
278 279 3.476552 CCTTCTACCTGCACTTTTCACA 58.523 45.455 0.00 0.00 0.00 3.58
279 280 2.814336 CCCTTCTACCTGCACTTTTCAC 59.186 50.000 0.00 0.00 0.00 3.18
280 281 2.708861 TCCCTTCTACCTGCACTTTTCA 59.291 45.455 0.00 0.00 0.00 2.69
281 282 3.075148 GTCCCTTCTACCTGCACTTTTC 58.925 50.000 0.00 0.00 0.00 2.29
282 283 2.224793 GGTCCCTTCTACCTGCACTTTT 60.225 50.000 0.00 0.00 33.97 2.27
283 284 1.351350 GGTCCCTTCTACCTGCACTTT 59.649 52.381 0.00 0.00 33.97 2.66
284 285 0.984995 GGTCCCTTCTACCTGCACTT 59.015 55.000 0.00 0.00 33.97 3.16
285 286 0.178903 TGGTCCCTTCTACCTGCACT 60.179 55.000 0.00 0.00 37.91 4.40
286 287 0.912486 ATGGTCCCTTCTACCTGCAC 59.088 55.000 0.00 0.00 37.91 4.57
287 288 0.911769 CATGGTCCCTTCTACCTGCA 59.088 55.000 0.00 0.00 37.91 4.41
288 289 0.912486 ACATGGTCCCTTCTACCTGC 59.088 55.000 0.00 0.00 37.91 4.85
289 290 4.837093 TTAACATGGTCCCTTCTACCTG 57.163 45.455 0.00 0.00 37.91 4.00
290 291 5.312443 ACTTTTAACATGGTCCCTTCTACCT 59.688 40.000 0.00 0.00 37.91 3.08
291 292 5.567430 ACTTTTAACATGGTCCCTTCTACC 58.433 41.667 0.00 0.00 37.53 3.18
292 293 6.150641 GGAACTTTTAACATGGTCCCTTCTAC 59.849 42.308 0.00 0.00 31.19 2.59
293 294 6.243148 GGAACTTTTAACATGGTCCCTTCTA 58.757 40.000 0.00 0.00 31.19 2.10
294 295 5.077564 GGAACTTTTAACATGGTCCCTTCT 58.922 41.667 0.00 0.00 31.19 2.85
295 296 5.386958 GGAACTTTTAACATGGTCCCTTC 57.613 43.478 0.00 0.00 31.19 3.46
299 300 4.587262 ACTTGGGAACTTTTAACATGGTCC 59.413 41.667 0.00 0.00 35.92 4.46
300 301 5.784578 ACTTGGGAACTTTTAACATGGTC 57.215 39.130 0.00 0.00 0.00 4.02
301 302 7.849322 ATTACTTGGGAACTTTTAACATGGT 57.151 32.000 0.00 0.00 0.00 3.55
302 303 9.554395 AAAATTACTTGGGAACTTTTAACATGG 57.446 29.630 0.00 0.00 0.00 3.66
309 310 9.902196 CGTATACAAAATTACTTGGGAACTTTT 57.098 29.630 3.32 0.00 0.00 2.27
310 311 8.024865 GCGTATACAAAATTACTTGGGAACTTT 58.975 33.333 3.32 0.00 0.00 2.66
311 312 7.175293 TGCGTATACAAAATTACTTGGGAACTT 59.825 33.333 3.32 0.00 0.00 2.66
312 313 6.655848 TGCGTATACAAAATTACTTGGGAACT 59.344 34.615 3.32 0.00 0.00 3.01
313 314 6.844254 TGCGTATACAAAATTACTTGGGAAC 58.156 36.000 3.32 0.00 0.00 3.62
314 315 7.175293 ACTTGCGTATACAAAATTACTTGGGAA 59.825 33.333 3.32 0.00 0.00 3.97
315 316 6.655848 ACTTGCGTATACAAAATTACTTGGGA 59.344 34.615 3.32 0.00 0.00 4.37
316 317 6.745450 CACTTGCGTATACAAAATTACTTGGG 59.255 38.462 3.32 0.00 0.00 4.12
317 318 6.745450 CCACTTGCGTATACAAAATTACTTGG 59.255 38.462 3.32 0.00 0.00 3.61
318 319 7.523219 TCCACTTGCGTATACAAAATTACTTG 58.477 34.615 3.32 0.00 0.00 3.16
319 320 7.675962 TCCACTTGCGTATACAAAATTACTT 57.324 32.000 3.32 0.00 0.00 2.24
320 321 7.389607 AGTTCCACTTGCGTATACAAAATTACT 59.610 33.333 3.32 0.00 0.00 2.24
321 322 7.524065 AGTTCCACTTGCGTATACAAAATTAC 58.476 34.615 3.32 0.00 0.00 1.89
322 323 7.388224 TGAGTTCCACTTGCGTATACAAAATTA 59.612 33.333 3.32 0.00 0.00 1.40
323 324 6.205853 TGAGTTCCACTTGCGTATACAAAATT 59.794 34.615 3.32 0.00 0.00 1.82
324 325 5.703592 TGAGTTCCACTTGCGTATACAAAAT 59.296 36.000 3.32 0.00 0.00 1.82
325 326 5.057819 TGAGTTCCACTTGCGTATACAAAA 58.942 37.500 3.32 0.00 0.00 2.44
326 327 4.633175 TGAGTTCCACTTGCGTATACAAA 58.367 39.130 3.32 0.00 0.00 2.83
327 328 4.260139 TGAGTTCCACTTGCGTATACAA 57.740 40.909 3.32 0.00 0.00 2.41
328 329 3.945981 TGAGTTCCACTTGCGTATACA 57.054 42.857 3.32 0.00 0.00 2.29
329 330 4.689345 AGTTTGAGTTCCACTTGCGTATAC 59.311 41.667 0.00 0.00 0.00 1.47
330 331 4.688879 CAGTTTGAGTTCCACTTGCGTATA 59.311 41.667 0.00 0.00 0.00 1.47
331 332 3.498397 CAGTTTGAGTTCCACTTGCGTAT 59.502 43.478 0.00 0.00 0.00 3.06
332 333 2.869801 CAGTTTGAGTTCCACTTGCGTA 59.130 45.455 0.00 0.00 0.00 4.42
333 334 1.670811 CAGTTTGAGTTCCACTTGCGT 59.329 47.619 0.00 0.00 0.00 5.24
334 335 1.939934 TCAGTTTGAGTTCCACTTGCG 59.060 47.619 0.00 0.00 0.00 4.85
335 336 4.574599 AATCAGTTTGAGTTCCACTTGC 57.425 40.909 0.00 0.00 0.00 4.01
336 337 7.026631 TGTAAATCAGTTTGAGTTCCACTTG 57.973 36.000 0.00 0.00 36.07 3.16
337 338 6.238759 GCTGTAAATCAGTTTGAGTTCCACTT 60.239 38.462 0.00 0.00 45.23 3.16
338 339 5.239525 GCTGTAAATCAGTTTGAGTTCCACT 59.760 40.000 0.00 0.00 45.23 4.00
339 340 5.239525 AGCTGTAAATCAGTTTGAGTTCCAC 59.760 40.000 0.00 0.00 45.23 4.02
340 341 5.376625 AGCTGTAAATCAGTTTGAGTTCCA 58.623 37.500 0.00 0.00 45.23 3.53
341 342 5.470098 TGAGCTGTAAATCAGTTTGAGTTCC 59.530 40.000 0.00 0.00 45.23 3.62
342 343 6.203723 AGTGAGCTGTAAATCAGTTTGAGTTC 59.796 38.462 0.00 0.00 45.23 3.01
343 344 6.017605 CAGTGAGCTGTAAATCAGTTTGAGTT 60.018 38.462 0.00 0.00 45.23 3.01
344 345 5.468072 CAGTGAGCTGTAAATCAGTTTGAGT 59.532 40.000 0.00 0.00 45.23 3.41
345 346 5.698089 TCAGTGAGCTGTAAATCAGTTTGAG 59.302 40.000 0.00 0.00 45.23 3.02
346 347 5.610398 TCAGTGAGCTGTAAATCAGTTTGA 58.390 37.500 0.00 0.00 45.23 2.69
347 348 5.929697 TCAGTGAGCTGTAAATCAGTTTG 57.070 39.130 0.00 0.00 45.23 2.93
348 349 6.569226 GCATTCAGTGAGCTGTAAATCAGTTT 60.569 38.462 0.00 0.00 45.23 2.66
349 350 5.106396 GCATTCAGTGAGCTGTAAATCAGTT 60.106 40.000 0.00 0.00 45.23 3.16
350 351 4.394300 GCATTCAGTGAGCTGTAAATCAGT 59.606 41.667 0.00 0.00 45.23 3.41
351 352 4.634883 AGCATTCAGTGAGCTGTAAATCAG 59.365 41.667 6.11 0.00 46.12 2.90
352 353 4.582869 AGCATTCAGTGAGCTGTAAATCA 58.417 39.130 6.11 0.00 43.05 2.57
353 354 4.633126 TGAGCATTCAGTGAGCTGTAAATC 59.367 41.667 11.33 0.00 43.05 2.17
354 355 4.582869 TGAGCATTCAGTGAGCTGTAAAT 58.417 39.130 11.33 0.00 43.05 1.40
355 356 3.999001 CTGAGCATTCAGTGAGCTGTAAA 59.001 43.478 11.33 0.00 44.74 2.01
356 357 3.593096 CTGAGCATTCAGTGAGCTGTAA 58.407 45.455 11.33 0.00 44.74 2.41
357 358 3.242549 CTGAGCATTCAGTGAGCTGTA 57.757 47.619 11.33 0.83 44.74 2.74
358 359 2.096220 CTGAGCATTCAGTGAGCTGT 57.904 50.000 11.33 0.00 44.74 4.40
367 368 0.392595 CCTGAGCAGCTGAGCATTCA 60.393 55.000 20.43 10.97 36.85 2.57
368 369 0.392729 ACCTGAGCAGCTGAGCATTC 60.393 55.000 20.43 6.77 36.85 2.67
369 370 0.677098 CACCTGAGCAGCTGAGCATT 60.677 55.000 20.43 1.50 36.85 3.56
370 371 1.078356 CACCTGAGCAGCTGAGCAT 60.078 57.895 20.43 0.00 36.85 3.79
371 372 2.346365 CACCTGAGCAGCTGAGCA 59.654 61.111 20.43 13.26 36.85 4.26
372 373 1.741032 GACACCTGAGCAGCTGAGC 60.741 63.158 20.43 8.72 0.00 4.26
373 374 1.445754 CGACACCTGAGCAGCTGAG 60.446 63.158 20.43 0.00 0.00 3.35
374 375 2.653115 CGACACCTGAGCAGCTGA 59.347 61.111 20.43 0.00 0.00 4.26
375 376 3.117171 GCGACACCTGAGCAGCTG 61.117 66.667 10.11 10.11 0.00 4.24
376 377 4.385405 GGCGACACCTGAGCAGCT 62.385 66.667 0.00 0.00 34.51 4.24
387 388 4.652131 AACAATGGGCGGGCGACA 62.652 61.111 0.00 0.00 0.00 4.35
388 389 4.114997 CAACAATGGGCGGGCGAC 62.115 66.667 0.00 0.00 0.00 5.19
392 393 2.110757 AAAAGGCAACAATGGGCGGG 62.111 55.000 0.00 0.00 41.41 6.13
393 394 0.670239 GAAAAGGCAACAATGGGCGG 60.670 55.000 0.00 0.00 41.41 6.13
394 395 0.033228 TGAAAAGGCAACAATGGGCG 59.967 50.000 0.00 0.00 41.41 6.13
395 396 2.477845 ATGAAAAGGCAACAATGGGC 57.522 45.000 0.00 0.00 41.41 5.36
396 397 4.497300 CAGTATGAAAAGGCAACAATGGG 58.503 43.478 0.00 0.00 39.69 4.00
397 398 3.928375 GCAGTATGAAAAGGCAACAATGG 59.072 43.478 0.00 0.00 39.69 3.16
398 399 3.609373 CGCAGTATGAAAAGGCAACAATG 59.391 43.478 0.00 0.00 39.69 2.82
399 400 3.255642 ACGCAGTATGAAAAGGCAACAAT 59.744 39.130 0.00 0.00 41.94 2.71
400 401 2.621055 ACGCAGTATGAAAAGGCAACAA 59.379 40.909 0.00 0.00 41.94 2.83
401 402 2.226330 ACGCAGTATGAAAAGGCAACA 58.774 42.857 0.00 0.00 41.94 3.33
402 403 2.989422 ACGCAGTATGAAAAGGCAAC 57.011 45.000 0.00 0.00 41.94 4.17
414 415 3.581024 AACAATTCCTCGTACGCAGTA 57.419 42.857 11.24 0.00 45.11 2.74
416 417 2.159707 CCAAACAATTCCTCGTACGCAG 60.160 50.000 11.24 8.94 0.00 5.18
417 418 1.801771 CCAAACAATTCCTCGTACGCA 59.198 47.619 11.24 0.00 0.00 5.24
418 419 1.465187 GCCAAACAATTCCTCGTACGC 60.465 52.381 11.24 0.00 0.00 4.42
419 420 2.073816 AGCCAAACAATTCCTCGTACG 58.926 47.619 9.53 9.53 0.00 3.67
420 421 3.335579 AGAGCCAAACAATTCCTCGTAC 58.664 45.455 0.00 0.00 0.00 3.67
421 422 3.007506 TGAGAGCCAAACAATTCCTCGTA 59.992 43.478 0.00 0.00 0.00 3.43
422 423 2.224523 TGAGAGCCAAACAATTCCTCGT 60.225 45.455 0.00 0.00 0.00 4.18
423 424 2.426522 TGAGAGCCAAACAATTCCTCG 58.573 47.619 0.00 0.00 0.00 4.63
424 425 5.047802 TCAAATGAGAGCCAAACAATTCCTC 60.048 40.000 0.00 0.00 0.00 3.71
425 426 4.834496 TCAAATGAGAGCCAAACAATTCCT 59.166 37.500 0.00 0.00 0.00 3.36
426 427 5.138125 TCAAATGAGAGCCAAACAATTCC 57.862 39.130 0.00 0.00 0.00 3.01
427 428 5.809051 GGATCAAATGAGAGCCAAACAATTC 59.191 40.000 0.00 0.00 43.47 2.17
428 429 5.337813 GGGATCAAATGAGAGCCAAACAATT 60.338 40.000 4.57 0.00 45.76 2.32
429 430 4.161001 GGGATCAAATGAGAGCCAAACAAT 59.839 41.667 4.57 0.00 45.76 2.71
430 431 3.511146 GGGATCAAATGAGAGCCAAACAA 59.489 43.478 4.57 0.00 45.76 2.83
431 432 3.091545 GGGATCAAATGAGAGCCAAACA 58.908 45.455 4.57 0.00 45.76 2.83
432 433 3.359950 AGGGATCAAATGAGAGCCAAAC 58.640 45.455 4.57 0.00 45.76 2.93
433 434 3.744940 AGGGATCAAATGAGAGCCAAA 57.255 42.857 4.57 0.00 45.76 3.28
434 435 3.744940 AAGGGATCAAATGAGAGCCAA 57.255 42.857 4.57 0.00 45.76 4.52
435 436 3.744940 AAAGGGATCAAATGAGAGCCA 57.255 42.857 4.57 0.00 45.76 4.75
436 437 4.578105 CACTAAAGGGATCAAATGAGAGCC 59.422 45.833 0.00 0.00 43.27 4.70
437 438 5.065731 CACACTAAAGGGATCAAATGAGAGC 59.934 44.000 0.00 0.00 0.00 4.09
438 439 5.065731 GCACACTAAAGGGATCAAATGAGAG 59.934 44.000 0.00 0.00 0.00 3.20
439 440 4.943705 GCACACTAAAGGGATCAAATGAGA 59.056 41.667 0.00 0.00 0.00 3.27
440 441 4.946157 AGCACACTAAAGGGATCAAATGAG 59.054 41.667 0.00 0.00 0.00 2.90
441 442 4.922206 AGCACACTAAAGGGATCAAATGA 58.078 39.130 0.00 0.00 0.00 2.57
442 443 5.644644 GAAGCACACTAAAGGGATCAAATG 58.355 41.667 0.00 0.00 0.00 2.32
443 444 4.396166 CGAAGCACACTAAAGGGATCAAAT 59.604 41.667 0.00 0.00 0.00 2.32
444 445 3.751175 CGAAGCACACTAAAGGGATCAAA 59.249 43.478 0.00 0.00 0.00 2.69
445 446 3.334691 CGAAGCACACTAAAGGGATCAA 58.665 45.455 0.00 0.00 0.00 2.57
446 447 2.972625 CGAAGCACACTAAAGGGATCA 58.027 47.619 0.00 0.00 0.00 2.92
551 1026 6.204882 ACAAGACAGCATTAAACTAAGTGACC 59.795 38.462 0.00 0.00 0.00 4.02
552 1027 7.190920 ACAAGACAGCATTAAACTAAGTGAC 57.809 36.000 0.00 0.00 0.00 3.67
553 1028 7.801716 AACAAGACAGCATTAAACTAAGTGA 57.198 32.000 0.00 0.00 0.00 3.41
633 2493 1.001120 GGGGGTGGTGGGTAATTGG 59.999 63.158 0.00 0.00 0.00 3.16
662 2528 0.742505 ATCTGCCATGGCGAATTGTG 59.257 50.000 30.87 14.31 45.51 3.33
690 2559 1.012486 CGGCGTTGTGGTTACTCTCC 61.012 60.000 0.00 0.00 0.00 3.71
715 2584 2.714250 TCTCATCTCCTCCTCCCTCTAC 59.286 54.545 0.00 0.00 0.00 2.59
748 2617 0.182775 ACCCAGAAACCTTGCGTCTT 59.817 50.000 0.00 0.00 0.00 3.01
862 2734 1.153353 CCGCACTTTGGTTACGTGAT 58.847 50.000 0.00 0.00 0.00 3.06
870 2742 3.216292 GTGGTGCCGCACTTTGGT 61.216 61.111 22.41 0.00 34.40 3.67
975 2847 1.002134 AAATGGCACGAGGTCCTGG 60.002 57.895 0.00 0.00 0.00 4.45
1019 2891 4.335584 CGAGATCGGCGAGAGGGC 62.336 72.222 17.22 2.05 35.37 5.19
1057 2929 1.366319 GGCATATGGGTGGAGAGGAT 58.634 55.000 4.56 0.00 0.00 3.24
1080 2952 4.435436 CACGGAGGCAGCAGCGTA 62.435 66.667 0.00 0.00 43.41 4.42
1174 3046 7.385478 GGAGAAGTTCTTGTTTACCTTGTAGAG 59.615 40.741 6.88 0.00 0.00 2.43
1196 3803 8.049117 ACAACTCAAATGCTTTATCTATGGAGA 58.951 33.333 0.00 0.00 35.71 3.71
1231 3838 1.415672 GGCCCATACGAGGATTCCCA 61.416 60.000 0.00 0.00 33.88 4.37
1468 5638 2.700897 CAGATACCCCGGAAGAGTTGAT 59.299 50.000 0.73 0.00 0.00 2.57
1476 5646 3.838317 CAATCCTATCAGATACCCCGGAA 59.162 47.826 0.73 0.00 0.00 4.30
1645 5885 7.423199 AGCAAGCATTAATCATGACAGTAATG 58.577 34.615 20.91 20.91 37.13 1.90
1650 5890 6.436261 CCTTAGCAAGCATTAATCATGACAG 58.564 40.000 0.00 0.00 34.31 3.51
1664 5904 1.019278 TGCACGTAGCCTTAGCAAGC 61.019 55.000 7.38 0.00 44.83 4.01
1665 5905 1.594862 GATGCACGTAGCCTTAGCAAG 59.405 52.381 7.38 0.00 44.83 4.01
1666 5906 1.066502 TGATGCACGTAGCCTTAGCAA 60.067 47.619 7.38 0.00 44.83 3.91
1722 6132 4.568152 AGCACACACACATACCTTTTTC 57.432 40.909 0.00 0.00 0.00 2.29
1829 6239 5.724854 AGTATCTCAAAACTAGGGCCAAGTA 59.275 40.000 6.18 0.00 0.00 2.24
1837 6251 5.212745 AGGAGGGAGTATCTCAAAACTAGG 58.787 45.833 0.00 0.00 38.91 3.02
1840 6254 6.455690 AAAAGGAGGGAGTATCTCAAAACT 57.544 37.500 0.00 0.00 38.91 2.66
1873 6287 4.834496 TGGTGAGATTTTTGAATTGAGCCT 59.166 37.500 0.00 0.00 0.00 4.58
1948 6363 8.592105 TTTGAGGAAAACAAGAGCATTAATTG 57.408 30.769 0.00 0.00 0.00 2.32
2021 6436 7.230849 AGAGAAAATTGACCAATGCATGTAA 57.769 32.000 0.00 0.00 0.00 2.41
2054 6469 8.584063 TCAAGGTGCATTATATCATTGCATAT 57.416 30.769 9.52 0.00 46.90 1.78
2055 6470 7.999450 TCAAGGTGCATTATATCATTGCATA 57.001 32.000 9.52 0.00 46.90 3.14
2066 6481 6.839124 TGTTCAGATTTCAAGGTGCATTAT 57.161 33.333 0.00 0.00 0.00 1.28
2079 6494 5.539574 TGTTTCCCATCACATGTTCAGATTT 59.460 36.000 0.00 0.00 0.00 2.17
2098 6513 8.825667 TTTATAAGGCTCAATTTGGTTGTTTC 57.174 30.769 0.00 0.00 38.95 2.78
2134 6549 9.971922 CCTTATAGGGCTTATCTCAAAATTTTG 57.028 33.333 22.40 22.40 39.48 2.44
2161 6576 4.771114 TGATACTCCCCATTACAACCAG 57.229 45.455 0.00 0.00 0.00 4.00
2204 6619 5.996513 CGGAGGTAGTATCACACACTAGTAT 59.003 44.000 0.00 0.00 0.00 2.12
2214 6629 4.579454 TGCATTACGGAGGTAGTATCAC 57.421 45.455 0.00 0.00 0.00 3.06
2256 6671 7.153985 GCATGGCAATTAATAAGGCAATCTAA 58.846 34.615 17.20 0.00 41.29 2.10
2259 6674 5.299148 TGCATGGCAATTAATAAGGCAATC 58.701 37.500 17.20 13.06 41.29 2.67
2263 6678 4.687483 GTCATGCATGGCAATTAATAAGGC 59.313 41.667 26.04 7.25 43.62 4.35
2264 6679 5.693104 GTGTCATGCATGGCAATTAATAAGG 59.307 40.000 34.01 0.00 44.94 2.69
2266 6681 6.218108 TGTGTCATGCATGGCAATTAATAA 57.782 33.333 34.01 7.61 44.94 1.40
2271 6686 3.068560 GTTTGTGTCATGCATGGCAATT 58.931 40.909 34.01 0.00 44.94 2.32
2284 6699 6.554334 TTAAATGCTCCACTAGTTTGTGTC 57.446 37.500 0.00 0.00 36.30 3.67
2292 6707 8.035394 ACCGTATCATATTAAATGCTCCACTAG 58.965 37.037 0.00 0.00 0.00 2.57
2296 6711 8.536175 TGATACCGTATCATATTAAATGCTCCA 58.464 33.333 15.89 0.00 40.09 3.86
2297 6712 8.942338 TGATACCGTATCATATTAAATGCTCC 57.058 34.615 15.89 0.00 40.09 4.70
2323 6738 9.249053 GGAAAGAGAGGATGTAGTATCATATCA 57.751 37.037 0.00 0.00 0.00 2.15
2324 6739 9.474313 AGGAAAGAGAGGATGTAGTATCATATC 57.526 37.037 0.00 0.00 0.00 1.63
2325 6740 9.474313 GAGGAAAGAGAGGATGTAGTATCATAT 57.526 37.037 0.00 0.00 0.00 1.78
2330 6745 8.560124 AAATGAGGAAAGAGAGGATGTAGTAT 57.440 34.615 0.00 0.00 0.00 2.12
2338 6753 9.618890 CACATAATTAAATGAGGAAAGAGAGGA 57.381 33.333 0.00 0.00 0.00 3.71
2346 6762 5.826601 TGCGCACATAATTAAATGAGGAA 57.173 34.783 5.66 0.00 0.00 3.36
2352 6768 6.330004 TGGATGATGCGCACATAATTAAAT 57.670 33.333 14.90 0.00 36.35 1.40
2366 6782 6.985645 TGCCAACTAAATATTTTGGATGATGC 59.014 34.615 17.83 12.97 42.17 3.91
2367 6783 8.984764 CATGCCAACTAAATATTTTGGATGATG 58.015 33.333 17.83 12.50 42.17 3.07
2368 6784 7.658575 GCATGCCAACTAAATATTTTGGATGAT 59.341 33.333 17.83 6.45 42.17 2.45
2369 6785 6.985645 GCATGCCAACTAAATATTTTGGATGA 59.014 34.615 17.83 4.80 42.17 2.92
2370 6786 6.762187 TGCATGCCAACTAAATATTTTGGATG 59.238 34.615 16.68 16.81 42.17 3.51
2372 6788 6.291648 TGCATGCCAACTAAATATTTTGGA 57.708 33.333 16.68 2.76 42.17 3.53
2373 6789 6.762187 TCATGCATGCCAACTAAATATTTTGG 59.238 34.615 22.25 9.30 42.43 3.28
2376 6792 8.863086 AGTATCATGCATGCCAACTAAATATTT 58.137 29.630 22.25 5.89 0.00 1.40
2377 6793 8.413309 AGTATCATGCATGCCAACTAAATATT 57.587 30.769 22.25 5.97 0.00 1.28
2378 6794 8.950210 GTAGTATCATGCATGCCAACTAAATAT 58.050 33.333 24.68 13.29 0.00 1.28
2380 6796 7.000472 AGTAGTATCATGCATGCCAACTAAAT 59.000 34.615 24.68 17.93 0.00 1.40
2381 6797 6.356556 AGTAGTATCATGCATGCCAACTAAA 58.643 36.000 24.68 12.44 0.00 1.85
2382 6798 5.928976 AGTAGTATCATGCATGCCAACTAA 58.071 37.500 24.68 9.84 0.00 2.24
2387 6803 6.112927 TCATAAGTAGTATCATGCATGCCA 57.887 37.500 22.25 8.84 0.00 4.92
2388 6804 7.984050 AGTATCATAAGTAGTATCATGCATGCC 59.016 37.037 22.25 11.72 0.00 4.40
2389 6805 8.939201 AGTATCATAAGTAGTATCATGCATGC 57.061 34.615 22.25 11.82 0.00 4.06
2390 6806 9.526713 GGAGTATCATAAGTAGTATCATGCATG 57.473 37.037 21.07 21.07 36.25 4.06
2402 6819 7.127405 TGGTTGTAGTGGGAGTATCATAAGTA 58.873 38.462 0.00 0.00 36.25 2.24
2403 6820 5.962031 TGGTTGTAGTGGGAGTATCATAAGT 59.038 40.000 0.00 0.00 36.25 2.24
2404 6821 6.479972 TGGTTGTAGTGGGAGTATCATAAG 57.520 41.667 0.00 0.00 36.25 1.73
2410 6827 1.838077 GGCTGGTTGTAGTGGGAGTAT 59.162 52.381 0.00 0.00 0.00 2.12
2414 6831 2.032965 TTAGGCTGGTTGTAGTGGGA 57.967 50.000 0.00 0.00 0.00 4.37
2422 6839 1.611519 TTTCCGGTTTAGGCTGGTTG 58.388 50.000 0.00 0.00 36.33 3.77
2423 6840 2.158579 TCTTTTCCGGTTTAGGCTGGTT 60.159 45.455 0.00 0.00 36.33 3.67
2424 6841 1.422402 TCTTTTCCGGTTTAGGCTGGT 59.578 47.619 0.00 0.00 36.33 4.00
2437 6854 6.180472 TGATTGTTCATACTCCCTCTTTTCC 58.820 40.000 0.00 0.00 0.00 3.13
2438 6855 7.254590 CGATGATTGTTCATACTCCCTCTTTTC 60.255 40.741 0.00 0.00 42.73 2.29
2442 6859 4.039730 CCGATGATTGTTCATACTCCCTCT 59.960 45.833 0.00 0.00 42.73 3.69
2463 6880 5.560966 ACAATTATTGTAGTTGCCTTCCG 57.439 39.130 9.02 0.00 43.27 4.30
2537 6956 9.082313 AGTCATCAACCATCTTCAAAGTTAAAT 57.918 29.630 0.00 0.00 0.00 1.40
2563 6982 2.176889 GACAGCACCAAGGGACTAGTA 58.823 52.381 0.00 0.00 38.49 1.82
2568 6987 2.185310 ATCCGACAGCACCAAGGGAC 62.185 60.000 0.00 0.00 0.00 4.46
2569 6988 1.918293 ATCCGACAGCACCAAGGGA 60.918 57.895 0.00 0.00 0.00 4.20
2572 6993 1.376424 AGCATCCGACAGCACCAAG 60.376 57.895 0.00 0.00 0.00 3.61
2579 7000 0.742281 CCAACCTCAGCATCCGACAG 60.742 60.000 0.00 0.00 0.00 3.51
2580 7001 1.296392 CCAACCTCAGCATCCGACA 59.704 57.895 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.