Multiple sequence alignment - TraesCS3A01G428700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G428700 chr3A 100.000 3328 0 0 1 3328 671766876 671763549 0.000000e+00 6146.0
1 TraesCS3A01G428700 chr3A 77.608 393 74 10 1295 1682 671697911 671697528 3.340000e-55 226.0
2 TraesCS3A01G428700 chr3D 92.863 2284 79 44 230 2481 536339255 536337024 0.000000e+00 3238.0
3 TraesCS3A01G428700 chr3D 83.643 269 40 4 2707 2972 500140145 500140412 1.980000e-62 250.0
4 TraesCS3A01G428700 chr3D 77.778 396 78 9 1295 1682 536027763 536028156 5.550000e-58 235.0
5 TraesCS3A01G428700 chr3D 88.496 113 9 2 47 159 536369191 536369083 2.080000e-27 134.0
6 TraesCS3A01G428700 chr3D 89.583 96 7 3 2552 2646 536336574 536336481 5.830000e-23 119.0
7 TraesCS3A01G428700 chr3B 90.597 2446 112 57 230 2639 708912547 708910184 0.000000e+00 3134.0
8 TraesCS3A01G428700 chr3B 89.243 1599 99 34 969 2551 708503170 708504711 0.000000e+00 1932.0
9 TraesCS3A01G428700 chr3B 83.489 1502 136 52 228 1690 708496465 708497893 0.000000e+00 1297.0
10 TraesCS3A01G428700 chr3B 88.615 325 25 8 228 551 708499607 708499920 5.210000e-103 385.0
11 TraesCS3A01G428700 chr3B 84.528 265 38 3 2707 2969 206273345 206273082 3.290000e-65 259.0
12 TraesCS3A01G428700 chr3B 77.215 395 83 7 1295 1684 708367624 708367232 1.200000e-54 224.0
13 TraesCS3A01G428700 chr3B 82.807 285 14 10 609 885 708502833 708503090 4.320000e-54 222.0
14 TraesCS3A01G428700 chr3B 89.062 128 10 2 47 174 708912774 708912651 4.450000e-34 156.0
15 TraesCS3A01G428700 chr3B 85.075 67 6 1 549 615 708499935 708499997 7.710000e-07 65.8
16 TraesCS3A01G428700 chr3B 100.000 28 0 0 2676 2703 492571637 492571664 6.000000e-03 52.8
17 TraesCS3A01G428700 chr2D 83.955 268 38 5 2705 2969 32625338 32625603 5.510000e-63 252.0
18 TraesCS3A01G428700 chrUn 84.800 250 34 4 2724 2971 96159019 96158772 7.130000e-62 248.0
19 TraesCS3A01G428700 chr5D 82.642 265 43 3 2707 2969 58404402 58404139 7.180000e-57 231.0
20 TraesCS3A01G428700 chr1B 82.353 272 40 8 2703 2969 222993461 222993729 2.580000e-56 230.0
21 TraesCS3A01G428700 chr1A 82.156 269 45 3 2705 2971 568116348 568116615 9.290000e-56 228.0
22 TraesCS3A01G428700 chr2B 82.397 267 40 7 2707 2969 406552770 406553033 3.340000e-55 226.0
23 TraesCS3A01G428700 chr7A 81.588 277 42 9 2707 2977 700979512 700979239 1.550000e-53 220.0
24 TraesCS3A01G428700 chr7A 96.875 32 0 1 2975 3006 468828436 468828406 6.000000e-03 52.8
25 TraesCS3A01G428700 chr7D 96.875 32 0 1 2975 3006 408714644 408714614 6.000000e-03 52.8
26 TraesCS3A01G428700 chr7B 96.875 32 0 1 2975 3006 423134210 423134180 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G428700 chr3A 671763549 671766876 3327 True 6146.00 6146 100.0000 1 3328 1 chr3A.!!$R2 3327
1 TraesCS3A01G428700 chr3D 536336481 536339255 2774 True 1678.50 3238 91.2230 230 2646 2 chr3D.!!$R2 2416
2 TraesCS3A01G428700 chr3B 708910184 708912774 2590 True 1645.00 3134 89.8295 47 2639 2 chr3B.!!$R3 2592
3 TraesCS3A01G428700 chr3B 708496465 708504711 8246 False 780.36 1932 85.8458 228 2551 5 chr3B.!!$F2 2323

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.038159 AGAAGTTCGGCGGAGTTCAG 60.038 55.0 31.33 0.0 0.0 3.02 F
41 42 0.319641 GAAGTTCGGCGGAGTTCAGT 60.320 55.0 26.73 0.0 0.0 3.41 F
42 43 0.319641 AAGTTCGGCGGAGTTCAGTC 60.320 55.0 7.21 0.0 0.0 3.51 F
1694 7833 0.304705 CTCGTCGCCATTGCCATTAC 59.695 55.0 0.00 0.0 0.0 1.89 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1674 7813 0.176910 TAATGGCAATGGCGACGAGA 59.823 50.0 0.0 0.00 42.47 4.04 R
1675 7814 0.304705 GTAATGGCAATGGCGACGAG 59.695 55.0 0.0 0.00 42.47 4.18 R
1734 7873 0.584396 AGAGAGCACGTCGATCGATC 59.416 55.0 22.5 15.68 42.86 3.69 R
2678 9229 0.032815 GGGATCGGCTAGAGTTGCTC 59.967 60.0 0.0 0.00 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.813529 AAAAAGATGAGAAGTTCGGCG 57.186 42.857 0.00 0.00 0.00 6.46
33 34 1.726853 AAAGATGAGAAGTTCGGCGG 58.273 50.000 7.21 0.00 0.00 6.13
34 35 0.895530 AAGATGAGAAGTTCGGCGGA 59.104 50.000 7.21 0.00 0.00 5.54
35 36 0.457851 AGATGAGAAGTTCGGCGGAG 59.542 55.000 7.21 0.00 0.00 4.63
36 37 0.173708 GATGAGAAGTTCGGCGGAGT 59.826 55.000 7.21 0.00 0.00 3.85
37 38 0.608640 ATGAGAAGTTCGGCGGAGTT 59.391 50.000 8.25 8.25 0.00 3.01
38 39 0.038526 TGAGAAGTTCGGCGGAGTTC 60.039 55.000 24.88 24.88 0.00 3.01
39 40 0.038526 GAGAAGTTCGGCGGAGTTCA 60.039 55.000 31.33 0.00 0.00 3.18
40 41 0.038159 AGAAGTTCGGCGGAGTTCAG 60.038 55.000 31.33 0.00 0.00 3.02
41 42 0.319641 GAAGTTCGGCGGAGTTCAGT 60.320 55.000 26.73 0.00 0.00 3.41
42 43 0.319641 AAGTTCGGCGGAGTTCAGTC 60.320 55.000 7.21 0.00 0.00 3.51
43 44 1.737008 GTTCGGCGGAGTTCAGTCC 60.737 63.158 7.21 0.00 0.00 3.85
44 45 1.906824 TTCGGCGGAGTTCAGTCCT 60.907 57.895 7.21 0.00 34.00 3.85
45 46 0.609957 TTCGGCGGAGTTCAGTCCTA 60.610 55.000 7.21 0.00 34.00 2.94
46 47 0.395311 TCGGCGGAGTTCAGTCCTAT 60.395 55.000 7.21 0.00 34.00 2.57
47 48 0.460311 CGGCGGAGTTCAGTCCTATT 59.540 55.000 0.00 0.00 34.00 1.73
48 49 1.536284 CGGCGGAGTTCAGTCCTATTC 60.536 57.143 0.00 0.00 34.00 1.75
49 50 1.536284 GGCGGAGTTCAGTCCTATTCG 60.536 57.143 0.00 0.00 34.00 3.34
87 88 4.386711 AGTCAGTTTAACCACCTAACAGC 58.613 43.478 0.00 0.00 0.00 4.40
101 102 5.807520 CACCTAACAGCAAGTACTATCACAG 59.192 44.000 0.00 0.00 0.00 3.66
109 110 4.859798 GCAAGTACTATCACAGTCACAGAC 59.140 45.833 0.00 0.00 38.80 3.51
113 114 2.254459 CTATCACAGTCACAGACGTGC 58.746 52.381 0.00 0.00 43.28 5.34
115 116 1.956170 CACAGTCACAGACGTGCCC 60.956 63.158 0.00 0.00 43.28 5.36
116 117 2.734723 CAGTCACAGACGTGCCCG 60.735 66.667 0.00 0.00 43.28 6.13
117 118 4.664677 AGTCACAGACGTGCCCGC 62.665 66.667 0.00 0.00 43.28 6.13
161 162 2.126071 CTGGTACGGTGTCGCCAG 60.126 66.667 2.76 0.00 39.18 4.85
174 206 1.444895 CGCCAGCATGCCAAAGAAC 60.445 57.895 15.66 0.00 31.97 3.01
175 207 1.079612 GCCAGCATGCCAAAGAACC 60.080 57.895 15.66 0.00 31.97 3.62
182 214 3.747976 GCCAAAGAACCGCGCCAT 61.748 61.111 0.00 0.00 0.00 4.40
183 215 2.179018 CCAAAGAACCGCGCCATG 59.821 61.111 0.00 0.00 0.00 3.66
184 216 2.625823 CCAAAGAACCGCGCCATGT 61.626 57.895 0.00 0.00 0.00 3.21
185 217 1.442520 CAAAGAACCGCGCCATGTG 60.443 57.895 0.00 0.00 0.00 3.21
186 218 3.267597 AAAGAACCGCGCCATGTGC 62.268 57.895 0.00 0.00 35.52 4.57
205 237 1.153289 GGATCAGATGTGCCGCTGT 60.153 57.895 0.00 0.00 33.90 4.40
206 238 1.434622 GGATCAGATGTGCCGCTGTG 61.435 60.000 0.00 0.00 33.90 3.66
208 240 3.807538 CAGATGTGCCGCTGTGCC 61.808 66.667 0.00 0.00 0.00 5.01
259 3463 3.550992 GTGCACACGATACGCCGG 61.551 66.667 13.17 0.00 0.00 6.13
264 3468 3.261951 CACGATACGCCGGCCAAG 61.262 66.667 23.46 9.96 0.00 3.61
331 3536 3.693245 GCGATACTGGTGACGCTG 58.307 61.111 14.72 0.00 46.06 5.18
635 6711 0.457681 GCTGCGAGAGTTCTGAGACC 60.458 60.000 0.00 0.00 0.00 3.85
685 6762 4.023279 TGGTTTCATCTGTCGGTTTGATTG 60.023 41.667 0.00 0.00 0.00 2.67
741 6827 1.582502 GACCTCGCGTTTGATTAGTCG 59.417 52.381 5.77 0.00 0.00 4.18
902 7020 4.436998 AGCGTCCGAGGAAAGCCG 62.437 66.667 14.43 6.41 39.96 5.52
921 7039 1.298014 GGCTTGCTGCTGGTAGAGT 59.702 57.895 0.00 0.00 42.39 3.24
993 7124 2.096596 GAGTTGATCCAGCTGCTGC 58.903 57.895 23.86 11.17 40.05 5.25
1294 7433 2.668212 TTTCCTTGGCGCAGACGG 60.668 61.111 10.83 1.75 41.59 4.79
1295 7434 4.697756 TTCCTTGGCGCAGACGGG 62.698 66.667 10.83 3.62 41.59 5.28
1590 7729 3.529533 CAAGAGCTACATGACCAAGGAG 58.470 50.000 0.00 0.00 0.00 3.69
1694 7833 0.304705 CTCGTCGCCATTGCCATTAC 59.695 55.000 0.00 0.00 0.00 1.89
1698 7837 2.353269 CGTCGCCATTGCCATTACTTTA 59.647 45.455 0.00 0.00 0.00 1.85
1699 7838 3.546020 CGTCGCCATTGCCATTACTTTAG 60.546 47.826 0.00 0.00 0.00 1.85
1701 7840 4.013728 TCGCCATTGCCATTACTTTAGTT 58.986 39.130 0.00 0.00 0.00 2.24
1702 7841 4.461081 TCGCCATTGCCATTACTTTAGTTT 59.539 37.500 0.00 0.00 0.00 2.66
1703 7842 5.648526 TCGCCATTGCCATTACTTTAGTTTA 59.351 36.000 0.00 0.00 0.00 2.01
1704 7843 5.971202 CGCCATTGCCATTACTTTAGTTTAG 59.029 40.000 0.00 0.00 0.00 1.85
1734 7873 4.997395 TCCATCGTTTTCTTTTCTCTGGAG 59.003 41.667 0.00 0.00 0.00 3.86
1784 7923 5.389098 CCGTTAGAAATAATAATCGTGCCGG 60.389 44.000 0.00 0.00 0.00 6.13
1792 7931 0.032130 TAATCGTGCCGGCATCTCTC 59.968 55.000 35.23 18.65 0.00 3.20
1793 7932 1.680522 AATCGTGCCGGCATCTCTCT 61.681 55.000 35.23 12.67 0.00 3.10
1794 7933 0.823769 ATCGTGCCGGCATCTCTCTA 60.824 55.000 35.23 11.86 0.00 2.43
1795 7934 1.299468 CGTGCCGGCATCTCTCTAC 60.299 63.158 35.23 16.18 0.00 2.59
2529 9079 9.084164 GCTATATTTCTCGAAAAGAGTACACAA 57.916 33.333 0.00 0.00 46.86 3.33
2584 9134 0.546122 TGCTATGCTCCGGTGGATTT 59.454 50.000 15.92 0.00 0.00 2.17
2587 9137 2.548480 GCTATGCTCCGGTGGATTTTAC 59.452 50.000 15.92 0.40 0.00 2.01
2592 9142 0.686224 TCCGGTGGATTTTACGGTGT 59.314 50.000 0.00 0.00 46.06 4.16
2646 9197 0.255890 GCATCTCAAGCCCAACCCTA 59.744 55.000 0.00 0.00 0.00 3.53
2647 9198 1.340991 GCATCTCAAGCCCAACCCTAA 60.341 52.381 0.00 0.00 0.00 2.69
2648 9199 2.687914 GCATCTCAAGCCCAACCCTAAT 60.688 50.000 0.00 0.00 0.00 1.73
2649 9200 3.217626 CATCTCAAGCCCAACCCTAATC 58.782 50.000 0.00 0.00 0.00 1.75
2650 9201 2.274542 TCTCAAGCCCAACCCTAATCA 58.725 47.619 0.00 0.00 0.00 2.57
2651 9202 2.239654 TCTCAAGCCCAACCCTAATCAG 59.760 50.000 0.00 0.00 0.00 2.90
2652 9203 2.239654 CTCAAGCCCAACCCTAATCAGA 59.760 50.000 0.00 0.00 0.00 3.27
2653 9204 2.026262 TCAAGCCCAACCCTAATCAGAC 60.026 50.000 0.00 0.00 0.00 3.51
2654 9205 0.919710 AGCCCAACCCTAATCAGACC 59.080 55.000 0.00 0.00 0.00 3.85
2655 9206 0.919710 GCCCAACCCTAATCAGACCT 59.080 55.000 0.00 0.00 0.00 3.85
2656 9207 2.124411 GCCCAACCCTAATCAGACCTA 58.876 52.381 0.00 0.00 0.00 3.08
2657 9208 2.104963 GCCCAACCCTAATCAGACCTAG 59.895 54.545 0.00 0.00 0.00 3.02
2658 9209 3.385115 CCCAACCCTAATCAGACCTAGT 58.615 50.000 0.00 0.00 0.00 2.57
2659 9210 3.388350 CCCAACCCTAATCAGACCTAGTC 59.612 52.174 0.00 0.00 0.00 2.59
2660 9211 3.068307 CCAACCCTAATCAGACCTAGTCG 59.932 52.174 0.00 0.00 37.67 4.18
2661 9212 3.947612 ACCCTAATCAGACCTAGTCGA 57.052 47.619 0.00 0.00 37.67 4.20
2662 9213 4.246712 ACCCTAATCAGACCTAGTCGAA 57.753 45.455 0.00 0.00 37.67 3.71
2663 9214 3.952967 ACCCTAATCAGACCTAGTCGAAC 59.047 47.826 0.00 0.00 37.67 3.95
2664 9215 4.208746 CCCTAATCAGACCTAGTCGAACT 58.791 47.826 0.00 0.00 37.67 3.01
2665 9216 4.276431 CCCTAATCAGACCTAGTCGAACTC 59.724 50.000 0.00 0.00 37.67 3.01
2666 9217 5.127491 CCTAATCAGACCTAGTCGAACTCT 58.873 45.833 0.00 0.00 37.67 3.24
2667 9218 5.237779 CCTAATCAGACCTAGTCGAACTCTC 59.762 48.000 0.00 0.00 37.67 3.20
2668 9219 2.619147 TCAGACCTAGTCGAACTCTCG 58.381 52.381 0.00 0.00 46.87 4.04
2669 9220 1.666700 CAGACCTAGTCGAACTCTCGG 59.333 57.143 0.00 0.00 45.49 4.63
2674 9225 3.745803 GTCGAACTCTCGGCCGGT 61.746 66.667 27.83 13.15 44.05 5.28
2675 9226 2.987547 TCGAACTCTCGGCCGGTT 60.988 61.111 27.83 21.57 45.49 4.44
2676 9227 2.809601 CGAACTCTCGGCCGGTTG 60.810 66.667 27.83 17.31 41.57 3.77
2677 9228 2.654877 GAACTCTCGGCCGGTTGA 59.345 61.111 27.83 19.38 0.00 3.18
2678 9229 1.446272 GAACTCTCGGCCGGTTGAG 60.446 63.158 27.83 28.36 0.00 3.02
2679 9230 1.874345 GAACTCTCGGCCGGTTGAGA 61.874 60.000 33.39 25.01 38.85 3.27
2681 9232 3.760035 TCTCGGCCGGTTGAGAGC 61.760 66.667 27.83 0.00 36.36 4.09
2682 9233 4.069232 CTCGGCCGGTTGAGAGCA 62.069 66.667 27.83 0.26 34.04 4.26
2683 9234 3.589654 CTCGGCCGGTTGAGAGCAA 62.590 63.158 27.83 0.00 34.04 3.91
2693 9244 1.545841 TTGAGAGCAACTCTAGCCGA 58.454 50.000 11.18 0.00 41.35 5.54
2694 9245 1.769026 TGAGAGCAACTCTAGCCGAT 58.231 50.000 11.18 0.00 41.35 4.18
2695 9246 1.678627 TGAGAGCAACTCTAGCCGATC 59.321 52.381 11.18 0.00 41.35 3.69
2696 9247 1.000717 GAGAGCAACTCTAGCCGATCC 60.001 57.143 0.00 0.00 41.35 3.36
2697 9248 0.032815 GAGCAACTCTAGCCGATCCC 59.967 60.000 0.00 0.00 0.00 3.85
2698 9249 1.069935 GCAACTCTAGCCGATCCCC 59.930 63.158 0.00 0.00 0.00 4.81
2699 9250 1.403687 GCAACTCTAGCCGATCCCCT 61.404 60.000 0.00 0.00 0.00 4.79
2700 9251 1.996798 CAACTCTAGCCGATCCCCTA 58.003 55.000 0.00 0.00 0.00 3.53
2701 9252 2.317040 CAACTCTAGCCGATCCCCTAA 58.683 52.381 0.00 0.00 0.00 2.69
2702 9253 2.698797 CAACTCTAGCCGATCCCCTAAA 59.301 50.000 0.00 0.00 0.00 1.85
2703 9254 2.599677 ACTCTAGCCGATCCCCTAAAG 58.400 52.381 0.00 0.00 0.00 1.85
2704 9255 2.177233 ACTCTAGCCGATCCCCTAAAGA 59.823 50.000 0.00 0.00 0.00 2.52
2705 9256 2.559231 CTCTAGCCGATCCCCTAAAGAC 59.441 54.545 0.00 0.00 0.00 3.01
2706 9257 2.177233 TCTAGCCGATCCCCTAAAGACT 59.823 50.000 0.00 0.00 0.00 3.24
2707 9258 2.769602 AGCCGATCCCCTAAAGACTA 57.230 50.000 0.00 0.00 0.00 2.59
2708 9259 2.317973 AGCCGATCCCCTAAAGACTAC 58.682 52.381 0.00 0.00 0.00 2.73
2709 9260 1.000496 GCCGATCCCCTAAAGACTACG 60.000 57.143 0.00 0.00 0.00 3.51
2710 9261 1.000496 CCGATCCCCTAAAGACTACGC 60.000 57.143 0.00 0.00 0.00 4.42
2711 9262 1.000496 CGATCCCCTAAAGACTACGCC 60.000 57.143 0.00 0.00 0.00 5.68
2712 9263 1.343789 GATCCCCTAAAGACTACGCCC 59.656 57.143 0.00 0.00 0.00 6.13
2713 9264 0.337428 TCCCCTAAAGACTACGCCCT 59.663 55.000 0.00 0.00 0.00 5.19
2714 9265 1.201424 CCCCTAAAGACTACGCCCTT 58.799 55.000 0.00 0.00 0.00 3.95
2715 9266 1.138464 CCCCTAAAGACTACGCCCTTC 59.862 57.143 0.00 0.00 0.00 3.46
2716 9267 1.202382 CCCTAAAGACTACGCCCTTCG 60.202 57.143 0.00 0.00 45.38 3.79
2748 9299 8.702163 AAAGAGTGTACTTTCAATTTTGTTGG 57.298 30.769 0.00 0.00 35.54 3.77
2749 9300 7.404671 AGAGTGTACTTTCAATTTTGTTGGT 57.595 32.000 0.00 0.00 0.00 3.67
2750 9301 8.514330 AGAGTGTACTTTCAATTTTGTTGGTA 57.486 30.769 0.00 0.00 0.00 3.25
2751 9302 8.962679 AGAGTGTACTTTCAATTTTGTTGGTAA 58.037 29.630 0.00 0.00 0.00 2.85
2752 9303 9.233232 GAGTGTACTTTCAATTTTGTTGGTAAG 57.767 33.333 0.00 0.00 0.00 2.34
2753 9304 8.745590 AGTGTACTTTCAATTTTGTTGGTAAGT 58.254 29.630 0.00 11.18 33.11 2.24
2754 9305 9.016623 GTGTACTTTCAATTTTGTTGGTAAGTC 57.983 33.333 10.31 6.18 31.89 3.01
2755 9306 8.740906 TGTACTTTCAATTTTGTTGGTAAGTCA 58.259 29.630 10.31 7.71 31.89 3.41
2756 9307 9.575783 GTACTTTCAATTTTGTTGGTAAGTCAA 57.424 29.630 10.31 0.00 31.89 3.18
2758 9309 9.495572 ACTTTCAATTTTGTTGGTAAGTCAAAA 57.504 25.926 0.00 0.00 42.44 2.44
2831 9382 9.981114 TTCATCGAATTAGTAGCATTAGATTCA 57.019 29.630 0.00 0.00 0.00 2.57
2903 9454 8.574251 AATATAGTTTTGCACATACTTGGTCA 57.426 30.769 0.00 0.00 0.00 4.02
2904 9455 6.892658 ATAGTTTTGCACATACTTGGTCAA 57.107 33.333 0.00 0.00 0.00 3.18
2905 9456 5.789643 AGTTTTGCACATACTTGGTCAAT 57.210 34.783 0.00 0.00 0.00 2.57
2906 9457 5.772521 AGTTTTGCACATACTTGGTCAATC 58.227 37.500 0.00 0.00 0.00 2.67
2907 9458 5.536161 AGTTTTGCACATACTTGGTCAATCT 59.464 36.000 0.00 0.00 0.00 2.40
2908 9459 6.040842 AGTTTTGCACATACTTGGTCAATCTT 59.959 34.615 0.00 0.00 0.00 2.40
2909 9460 6.403866 TTTGCACATACTTGGTCAATCTTT 57.596 33.333 0.00 0.00 0.00 2.52
2910 9461 5.375417 TGCACATACTTGGTCAATCTTTG 57.625 39.130 0.00 0.00 0.00 2.77
2911 9462 5.069318 TGCACATACTTGGTCAATCTTTGA 58.931 37.500 0.00 0.00 37.33 2.69
2912 9463 5.181811 TGCACATACTTGGTCAATCTTTGAG 59.818 40.000 0.00 0.00 41.01 3.02
2913 9464 5.412594 GCACATACTTGGTCAATCTTTGAGA 59.587 40.000 0.00 0.00 41.01 3.27
2914 9465 6.094603 GCACATACTTGGTCAATCTTTGAGAT 59.905 38.462 0.00 0.00 41.01 2.75
2915 9466 7.280876 GCACATACTTGGTCAATCTTTGAGATA 59.719 37.037 0.00 0.00 41.01 1.98
2916 9467 9.334947 CACATACTTGGTCAATCTTTGAGATAT 57.665 33.333 0.00 0.00 41.01 1.63
2917 9468 9.911788 ACATACTTGGTCAATCTTTGAGATATT 57.088 29.630 0.00 0.00 41.01 1.28
2921 9472 9.300681 ACTTGGTCAATCTTTGAGATATTTTGA 57.699 29.630 0.00 0.00 41.01 2.69
2922 9473 9.565213 CTTGGTCAATCTTTGAGATATTTTGAC 57.435 33.333 11.12 11.12 41.01 3.18
2923 9474 8.634335 TGGTCAATCTTTGAGATATTTTGACA 57.366 30.769 17.19 7.04 40.01 3.58
2924 9475 9.246670 TGGTCAATCTTTGAGATATTTTGACAT 57.753 29.630 17.19 0.00 40.01 3.06
2950 9501 9.535878 TTTCAACAAAGTTGAAAGTACACTTTT 57.464 25.926 25.59 0.00 45.37 2.27
2951 9502 9.535878 TTCAACAAAGTTGAAAGTACACTTTTT 57.464 25.926 19.54 0.00 45.37 1.94
2952 9503 9.187455 TCAACAAAGTTGAAAGTACACTTTTTC 57.813 29.630 9.91 2.76 45.37 2.29
2953 9504 8.973378 CAACAAAGTTGAAAGTACACTTTTTCA 58.027 29.630 8.66 5.07 45.37 2.69
2954 9505 9.535878 AACAAAGTTGAAAGTACACTTTTTCAA 57.464 25.926 13.70 13.70 45.37 2.69
2960 9511 7.007313 TGAAAGTACACTTTTTCAAGTACGG 57.993 36.000 8.66 0.00 45.37 4.02
2961 9512 6.817641 TGAAAGTACACTTTTTCAAGTACGGA 59.182 34.615 8.66 0.00 45.37 4.69
2962 9513 6.839820 AAGTACACTTTTTCAAGTACGGAG 57.160 37.500 0.00 0.00 41.69 4.63
2963 9514 5.295152 AGTACACTTTTTCAAGTACGGAGG 58.705 41.667 0.00 0.00 41.69 4.30
2964 9515 3.473625 ACACTTTTTCAAGTACGGAGGG 58.526 45.455 0.00 0.00 41.69 4.30
2965 9516 3.135167 ACACTTTTTCAAGTACGGAGGGA 59.865 43.478 0.00 0.00 41.69 4.20
2966 9517 3.746492 CACTTTTTCAAGTACGGAGGGAG 59.254 47.826 0.00 0.00 41.69 4.30
2967 9518 3.390311 ACTTTTTCAAGTACGGAGGGAGT 59.610 43.478 0.00 0.00 41.81 3.85
2968 9519 4.590222 ACTTTTTCAAGTACGGAGGGAGTA 59.410 41.667 0.00 0.00 41.81 2.59
2969 9520 5.247792 ACTTTTTCAAGTACGGAGGGAGTAT 59.752 40.000 0.00 0.00 41.81 2.12
2970 9521 6.438425 ACTTTTTCAAGTACGGAGGGAGTATA 59.562 38.462 0.00 0.00 41.81 1.47
2971 9522 6.855763 TTTTCAAGTACGGAGGGAGTATAA 57.144 37.500 0.00 0.00 0.00 0.98
2972 9523 7.427989 TTTTCAAGTACGGAGGGAGTATAAT 57.572 36.000 0.00 0.00 0.00 1.28
2973 9524 8.537728 TTTTCAAGTACGGAGGGAGTATAATA 57.462 34.615 0.00 0.00 0.00 0.98
2974 9525 8.537728 TTTCAAGTACGGAGGGAGTATAATAA 57.462 34.615 0.00 0.00 0.00 1.40
2975 9526 8.537728 TTCAAGTACGGAGGGAGTATAATAAA 57.462 34.615 0.00 0.00 0.00 1.40
2976 9527 8.537728 TCAAGTACGGAGGGAGTATAATAAAA 57.462 34.615 0.00 0.00 0.00 1.52
2977 9528 8.636213 TCAAGTACGGAGGGAGTATAATAAAAG 58.364 37.037 0.00 0.00 0.00 2.27
2978 9529 8.636213 CAAGTACGGAGGGAGTATAATAAAAGA 58.364 37.037 0.00 0.00 0.00 2.52
2979 9530 8.406730 AGTACGGAGGGAGTATAATAAAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2980 9531 8.003629 AGTACGGAGGGAGTATAATAAAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
2981 9532 9.289782 GTACGGAGGGAGTATAATAAAAGAGTA 57.710 37.037 0.00 0.00 0.00 2.59
2982 9533 8.773033 ACGGAGGGAGTATAATAAAAGAGTAA 57.227 34.615 0.00 0.00 0.00 2.24
2983 9534 9.205513 ACGGAGGGAGTATAATAAAAGAGTAAA 57.794 33.333 0.00 0.00 0.00 2.01
3009 9560 7.448748 TTTTGATTTTACTCCTCTAACAGGC 57.551 36.000 0.00 0.00 43.08 4.85
3010 9561 5.755409 TGATTTTACTCCTCTAACAGGCA 57.245 39.130 0.00 0.00 43.08 4.75
3011 9562 5.488341 TGATTTTACTCCTCTAACAGGCAC 58.512 41.667 0.00 0.00 43.08 5.01
3012 9563 3.975168 TTTACTCCTCTAACAGGCACC 57.025 47.619 0.00 0.00 43.08 5.01
3013 9564 2.921834 TACTCCTCTAACAGGCACCT 57.078 50.000 0.00 0.00 43.08 4.00
3025 9576 2.679716 GCACCTGGCCAATCTCCT 59.320 61.111 7.01 0.00 36.11 3.69
3026 9577 1.452833 GCACCTGGCCAATCTCCTC 60.453 63.158 7.01 0.00 36.11 3.71
3027 9578 1.993653 CACCTGGCCAATCTCCTCA 59.006 57.895 7.01 0.00 0.00 3.86
3028 9579 0.329261 CACCTGGCCAATCTCCTCAA 59.671 55.000 7.01 0.00 0.00 3.02
3029 9580 0.622665 ACCTGGCCAATCTCCTCAAG 59.377 55.000 7.01 0.00 0.00 3.02
3030 9581 0.622665 CCTGGCCAATCTCCTCAAGT 59.377 55.000 7.01 0.00 0.00 3.16
3031 9582 1.681166 CCTGGCCAATCTCCTCAAGTG 60.681 57.143 7.01 0.00 0.00 3.16
3032 9583 0.329261 TGGCCAATCTCCTCAAGTGG 59.671 55.000 0.61 0.00 0.00 4.00
3033 9584 0.329596 GGCCAATCTCCTCAAGTGGT 59.670 55.000 0.00 0.00 0.00 4.16
3034 9585 1.272147 GGCCAATCTCCTCAAGTGGTT 60.272 52.381 0.00 0.00 0.00 3.67
3035 9586 2.026262 GGCCAATCTCCTCAAGTGGTTA 60.026 50.000 0.00 0.00 0.00 2.85
3036 9587 3.274288 GCCAATCTCCTCAAGTGGTTAG 58.726 50.000 0.00 0.00 0.00 2.34
3037 9588 3.878778 CCAATCTCCTCAAGTGGTTAGG 58.121 50.000 0.00 0.00 0.00 2.69
3038 9589 3.370953 CCAATCTCCTCAAGTGGTTAGGG 60.371 52.174 0.00 0.00 0.00 3.53
3039 9590 1.952621 TCTCCTCAAGTGGTTAGGGG 58.047 55.000 0.00 0.00 31.61 4.79
3040 9591 1.435563 TCTCCTCAAGTGGTTAGGGGA 59.564 52.381 0.00 0.00 37.57 4.81
3041 9592 1.834263 CTCCTCAAGTGGTTAGGGGAG 59.166 57.143 0.00 0.00 32.08 4.30
3042 9593 1.151413 TCCTCAAGTGGTTAGGGGAGT 59.849 52.381 0.00 0.00 0.00 3.85
3043 9594 2.384375 TCCTCAAGTGGTTAGGGGAGTA 59.616 50.000 0.00 0.00 0.00 2.59
3044 9595 3.178865 CCTCAAGTGGTTAGGGGAGTAA 58.821 50.000 0.00 0.00 0.00 2.24
3045 9596 3.585732 CCTCAAGTGGTTAGGGGAGTAAA 59.414 47.826 0.00 0.00 0.00 2.01
3046 9597 4.227527 CCTCAAGTGGTTAGGGGAGTAAAT 59.772 45.833 0.00 0.00 0.00 1.40
3047 9598 5.281037 CCTCAAGTGGTTAGGGGAGTAAATT 60.281 44.000 0.00 0.00 0.00 1.82
3048 9599 6.208840 TCAAGTGGTTAGGGGAGTAAATTT 57.791 37.500 0.00 0.00 0.00 1.82
3049 9600 6.616577 TCAAGTGGTTAGGGGAGTAAATTTT 58.383 36.000 0.00 0.00 0.00 1.82
3050 9601 7.070629 TCAAGTGGTTAGGGGAGTAAATTTTT 58.929 34.615 0.00 0.00 0.00 1.94
3072 9623 5.769484 TTTTACTCAGCCTATCCGTAGAG 57.231 43.478 0.00 0.00 0.00 2.43
3073 9624 4.434545 TTACTCAGCCTATCCGTAGAGT 57.565 45.455 0.00 0.00 39.43 3.24
3074 9625 5.557576 TTACTCAGCCTATCCGTAGAGTA 57.442 43.478 0.00 0.00 37.50 2.59
3075 9626 4.434545 ACTCAGCCTATCCGTAGAGTAA 57.565 45.455 0.00 0.00 34.83 2.24
3076 9627 4.789807 ACTCAGCCTATCCGTAGAGTAAA 58.210 43.478 0.00 0.00 34.83 2.01
3077 9628 5.386924 ACTCAGCCTATCCGTAGAGTAAAT 58.613 41.667 0.00 0.00 34.83 1.40
3078 9629 6.540995 ACTCAGCCTATCCGTAGAGTAAATA 58.459 40.000 0.00 0.00 34.83 1.40
3079 9630 7.176490 ACTCAGCCTATCCGTAGAGTAAATAT 58.824 38.462 0.00 0.00 34.83 1.28
3080 9631 8.327271 ACTCAGCCTATCCGTAGAGTAAATATA 58.673 37.037 0.00 0.00 34.83 0.86
3081 9632 8.503458 TCAGCCTATCCGTAGAGTAAATATAC 57.497 38.462 0.00 0.00 0.00 1.47
3082 9633 8.327271 TCAGCCTATCCGTAGAGTAAATATACT 58.673 37.037 0.00 0.00 45.10 2.12
3093 9644 6.947903 GAGTAAATATACTCGGCCTTTAGC 57.052 41.667 0.00 0.00 46.25 3.09
3094 9645 6.667558 AGTAAATATACTCGGCCTTTAGCT 57.332 37.500 0.00 0.00 37.90 3.32
3095 9646 6.586844 GAGTAAATATACTCGGCCTTTAGCTG 59.413 42.308 0.00 0.00 46.25 4.24
3101 9652 4.522971 GGCCTTTAGCTGACCGAG 57.477 61.111 0.00 0.00 43.05 4.63
3102 9653 1.597461 GGCCTTTAGCTGACCGAGT 59.403 57.895 0.00 0.00 43.05 4.18
3103 9654 0.822164 GGCCTTTAGCTGACCGAGTA 59.178 55.000 0.00 0.00 43.05 2.59
3104 9655 1.206371 GGCCTTTAGCTGACCGAGTAA 59.794 52.381 0.00 0.00 43.05 2.24
3105 9656 2.354403 GGCCTTTAGCTGACCGAGTAAA 60.354 50.000 0.00 0.00 43.05 2.01
3106 9657 3.332034 GCCTTTAGCTGACCGAGTAAAA 58.668 45.455 0.00 0.00 38.99 1.52
3107 9658 3.939592 GCCTTTAGCTGACCGAGTAAAAT 59.060 43.478 0.00 0.00 38.99 1.82
3108 9659 4.034163 GCCTTTAGCTGACCGAGTAAAATC 59.966 45.833 0.00 0.00 38.99 2.17
3109 9660 5.420409 CCTTTAGCTGACCGAGTAAAATCT 58.580 41.667 0.00 0.00 0.00 2.40
3110 9661 6.570692 CCTTTAGCTGACCGAGTAAAATCTA 58.429 40.000 0.00 0.00 0.00 1.98
3111 9662 6.697892 CCTTTAGCTGACCGAGTAAAATCTAG 59.302 42.308 0.00 0.00 0.00 2.43
3112 9663 6.770746 TTAGCTGACCGAGTAAAATCTAGT 57.229 37.500 0.00 0.00 0.00 2.57
3113 9664 5.000012 AGCTGACCGAGTAAAATCTAGTG 58.000 43.478 0.00 0.00 0.00 2.74
3114 9665 4.113354 GCTGACCGAGTAAAATCTAGTGG 58.887 47.826 0.00 0.00 0.00 4.00
3115 9666 4.113354 CTGACCGAGTAAAATCTAGTGGC 58.887 47.826 0.00 0.00 0.00 5.01
3116 9667 3.767673 TGACCGAGTAAAATCTAGTGGCT 59.232 43.478 0.00 0.00 0.00 4.75
3117 9668 4.222145 TGACCGAGTAAAATCTAGTGGCTT 59.778 41.667 0.00 0.00 0.00 4.35
3118 9669 5.161943 ACCGAGTAAAATCTAGTGGCTTT 57.838 39.130 0.00 0.00 0.00 3.51
3119 9670 5.176592 ACCGAGTAAAATCTAGTGGCTTTC 58.823 41.667 0.00 0.00 0.00 2.62
3120 9671 4.571176 CCGAGTAAAATCTAGTGGCTTTCC 59.429 45.833 0.00 0.00 0.00 3.13
3121 9672 5.420409 CGAGTAAAATCTAGTGGCTTTCCT 58.580 41.667 0.00 0.00 0.00 3.36
3122 9673 5.520649 CGAGTAAAATCTAGTGGCTTTCCTC 59.479 44.000 0.00 0.00 0.00 3.71
3123 9674 5.420409 AGTAAAATCTAGTGGCTTTCCTCG 58.580 41.667 0.00 0.00 0.00 4.63
3124 9675 2.317530 AATCTAGTGGCTTTCCTCGC 57.682 50.000 0.00 0.00 0.00 5.03
3130 9681 4.491409 GGCTTTCCTCGCCCCCTC 62.491 72.222 0.00 0.00 41.73 4.30
3131 9682 4.491409 GCTTTCCTCGCCCCCTCC 62.491 72.222 0.00 0.00 0.00 4.30
3132 9683 4.162690 CTTTCCTCGCCCCCTCCG 62.163 72.222 0.00 0.00 0.00 4.63
3133 9684 4.707768 TTTCCTCGCCCCCTCCGA 62.708 66.667 0.00 0.00 0.00 4.55
3140 9691 3.739613 GCCCCCTCCGACCCAAAT 61.740 66.667 0.00 0.00 0.00 2.32
3141 9692 2.595655 CCCCCTCCGACCCAAATC 59.404 66.667 0.00 0.00 0.00 2.17
3142 9693 2.001269 CCCCCTCCGACCCAAATCT 61.001 63.158 0.00 0.00 0.00 2.40
3143 9694 1.224592 CCCCTCCGACCCAAATCTG 59.775 63.158 0.00 0.00 0.00 2.90
3144 9695 1.452108 CCCTCCGACCCAAATCTGC 60.452 63.158 0.00 0.00 0.00 4.26
3145 9696 1.452108 CCTCCGACCCAAATCTGCC 60.452 63.158 0.00 0.00 0.00 4.85
3146 9697 1.815421 CTCCGACCCAAATCTGCCG 60.815 63.158 0.00 0.00 0.00 5.69
3147 9698 3.508840 CCGACCCAAATCTGCCGC 61.509 66.667 0.00 0.00 0.00 6.53
3148 9699 2.436646 CGACCCAAATCTGCCGCT 60.437 61.111 0.00 0.00 0.00 5.52
3149 9700 2.753966 CGACCCAAATCTGCCGCTG 61.754 63.158 0.00 0.00 0.00 5.18
3150 9701 3.056313 GACCCAAATCTGCCGCTGC 62.056 63.158 0.00 0.00 38.26 5.25
3159 9710 4.112433 TGCCGCTGCATCCCATCA 62.112 61.111 0.00 0.00 44.23 3.07
3160 9711 3.589881 GCCGCTGCATCCCATCAC 61.590 66.667 0.00 0.00 37.47 3.06
3161 9712 2.903855 CCGCTGCATCCCATCACC 60.904 66.667 0.00 0.00 0.00 4.02
3162 9713 2.124612 CGCTGCATCCCATCACCA 60.125 61.111 0.00 0.00 0.00 4.17
3163 9714 2.184830 CGCTGCATCCCATCACCAG 61.185 63.158 0.00 0.00 0.00 4.00
3164 9715 2.487532 GCTGCATCCCATCACCAGC 61.488 63.158 0.00 0.00 41.57 4.85
3165 9716 1.226542 CTGCATCCCATCACCAGCT 59.773 57.895 0.00 0.00 0.00 4.24
3166 9717 0.818445 CTGCATCCCATCACCAGCTC 60.818 60.000 0.00 0.00 0.00 4.09
3167 9718 1.527844 GCATCCCATCACCAGCTCC 60.528 63.158 0.00 0.00 0.00 4.70
3168 9719 1.227764 CATCCCATCACCAGCTCCG 60.228 63.158 0.00 0.00 0.00 4.63
3169 9720 3.112205 ATCCCATCACCAGCTCCGC 62.112 63.158 0.00 0.00 0.00 5.54
3170 9721 4.864334 CCCATCACCAGCTCCGCC 62.864 72.222 0.00 0.00 0.00 6.13
3171 9722 4.864334 CCATCACCAGCTCCGCCC 62.864 72.222 0.00 0.00 0.00 6.13
3172 9723 4.864334 CATCACCAGCTCCGCCCC 62.864 72.222 0.00 0.00 0.00 5.80
3188 9739 4.039092 CCTGGGCCACCACCTCTG 62.039 72.222 0.00 0.00 43.37 3.35
3189 9740 3.252284 CTGGGCCACCACCTCTGT 61.252 66.667 0.00 0.00 43.37 3.41
3190 9741 1.918293 CTGGGCCACCACCTCTGTA 60.918 63.158 0.00 0.00 43.37 2.74
3191 9742 1.903877 CTGGGCCACCACCTCTGTAG 61.904 65.000 0.00 0.00 43.37 2.74
3192 9743 2.269241 GGCCACCACCTCTGTAGC 59.731 66.667 0.00 0.00 0.00 3.58
3193 9744 2.125512 GCCACCACCTCTGTAGCG 60.126 66.667 0.00 0.00 0.00 4.26
3194 9745 2.943978 GCCACCACCTCTGTAGCGT 61.944 63.158 0.00 0.00 0.00 5.07
3195 9746 1.215647 CCACCACCTCTGTAGCGTC 59.784 63.158 0.00 0.00 0.00 5.19
3196 9747 1.215647 CACCACCTCTGTAGCGTCC 59.784 63.158 0.00 0.00 0.00 4.79
3197 9748 1.982938 ACCACCTCTGTAGCGTCCC 60.983 63.158 0.00 0.00 0.00 4.46
3198 9749 1.982395 CCACCTCTGTAGCGTCCCA 60.982 63.158 0.00 0.00 0.00 4.37
3199 9750 1.215647 CACCTCTGTAGCGTCCCAC 59.784 63.158 0.00 0.00 0.00 4.61
3200 9751 1.982938 ACCTCTGTAGCGTCCCACC 60.983 63.158 0.00 0.00 0.00 4.61
3201 9752 2.722201 CCTCTGTAGCGTCCCACCC 61.722 68.421 0.00 0.00 0.00 4.61
3202 9753 2.682494 TCTGTAGCGTCCCACCCC 60.682 66.667 0.00 0.00 0.00 4.95
3203 9754 2.683933 CTGTAGCGTCCCACCCCT 60.684 66.667 0.00 0.00 0.00 4.79
3204 9755 2.203877 TGTAGCGTCCCACCCCTT 60.204 61.111 0.00 0.00 0.00 3.95
3205 9756 1.838073 CTGTAGCGTCCCACCCCTTT 61.838 60.000 0.00 0.00 0.00 3.11
3206 9757 1.376812 GTAGCGTCCCACCCCTTTG 60.377 63.158 0.00 0.00 0.00 2.77
3207 9758 3.262448 TAGCGTCCCACCCCTTTGC 62.262 63.158 0.00 0.00 0.00 3.68
3218 9769 4.415332 CCTTTGCCGCTGCTGCAG 62.415 66.667 24.80 24.80 40.35 4.41
3219 9770 4.415332 CTTTGCCGCTGCTGCAGG 62.415 66.667 29.05 16.83 40.35 4.85
3220 9771 4.953010 TTTGCCGCTGCTGCAGGA 62.953 61.111 29.05 12.70 40.35 3.86
3224 9775 2.670934 CCGCTGCTGCAGGAGTTT 60.671 61.111 32.29 0.00 39.64 2.66
3225 9776 2.263741 CCGCTGCTGCAGGAGTTTT 61.264 57.895 32.29 0.00 39.64 2.43
3226 9777 1.081641 CGCTGCTGCAGGAGTTTTG 60.082 57.895 32.29 17.98 39.64 2.44
3227 9778 1.372623 GCTGCTGCAGGAGTTTTGC 60.373 57.895 32.29 17.70 41.86 3.68
3231 9782 4.585070 TGCAGGAGTTTTGCAGCT 57.415 50.000 0.00 0.00 45.89 4.24
3232 9783 2.035421 TGCAGGAGTTTTGCAGCTG 58.965 52.632 10.11 10.11 45.89 4.24
3233 9784 1.372623 GCAGGAGTTTTGCAGCTGC 60.373 57.895 31.89 31.89 41.17 5.25
3234 9785 1.081641 CAGGAGTTTTGCAGCTGCG 60.082 57.895 32.11 11.93 45.83 5.18
3235 9786 2.256461 GGAGTTTTGCAGCTGCGG 59.744 61.111 32.11 0.00 45.83 5.69
3236 9787 2.555547 GGAGTTTTGCAGCTGCGGT 61.556 57.895 32.11 15.28 45.83 5.68
3237 9788 1.234615 GGAGTTTTGCAGCTGCGGTA 61.235 55.000 32.11 18.05 45.83 4.02
3238 9789 0.166814 GAGTTTTGCAGCTGCGGTAG 59.833 55.000 32.11 0.00 45.83 3.18
3239 9790 1.210155 GTTTTGCAGCTGCGGTAGG 59.790 57.895 32.11 0.00 45.83 3.18
3240 9791 1.072332 TTTTGCAGCTGCGGTAGGA 59.928 52.632 32.11 12.29 45.83 2.94
3241 9792 1.234615 TTTTGCAGCTGCGGTAGGAC 61.235 55.000 32.11 5.47 45.83 3.85
3242 9793 3.932580 TTGCAGCTGCGGTAGGACG 62.933 63.158 32.11 0.00 45.83 4.79
3260 9811 3.093278 CGAAGCGACCCATGAAGC 58.907 61.111 0.00 0.00 0.00 3.86
3261 9812 2.464459 CGAAGCGACCCATGAAGCC 61.464 63.158 0.00 0.00 0.00 4.35
3262 9813 2.436646 AAGCGACCCATGAAGCCG 60.437 61.111 0.00 0.00 0.00 5.52
3265 9816 2.745884 CGACCCATGAAGCCGCAA 60.746 61.111 0.00 0.00 0.00 4.85
3266 9817 2.877691 GACCCATGAAGCCGCAAC 59.122 61.111 0.00 0.00 0.00 4.17
3267 9818 2.676471 ACCCATGAAGCCGCAACC 60.676 61.111 0.00 0.00 0.00 3.77
3268 9819 2.676121 CCCATGAAGCCGCAACCA 60.676 61.111 0.00 0.00 0.00 3.67
3269 9820 2.274645 CCCATGAAGCCGCAACCAA 61.275 57.895 0.00 0.00 0.00 3.67
3270 9821 1.213537 CCATGAAGCCGCAACCAAG 59.786 57.895 0.00 0.00 0.00 3.61
3271 9822 1.243342 CCATGAAGCCGCAACCAAGA 61.243 55.000 0.00 0.00 0.00 3.02
3272 9823 0.597568 CATGAAGCCGCAACCAAGAA 59.402 50.000 0.00 0.00 0.00 2.52
3273 9824 0.883833 ATGAAGCCGCAACCAAGAAG 59.116 50.000 0.00 0.00 0.00 2.85
3274 9825 1.081175 GAAGCCGCAACCAAGAAGC 60.081 57.895 0.00 0.00 0.00 3.86
3275 9826 2.477972 GAAGCCGCAACCAAGAAGCC 62.478 60.000 0.00 0.00 0.00 4.35
3276 9827 3.294493 GCCGCAACCAAGAAGCCA 61.294 61.111 0.00 0.00 0.00 4.75
3277 9828 2.855514 GCCGCAACCAAGAAGCCAA 61.856 57.895 0.00 0.00 0.00 4.52
3278 9829 1.007387 CCGCAACCAAGAAGCCAAC 60.007 57.895 0.00 0.00 0.00 3.77
3279 9830 1.732917 CGCAACCAAGAAGCCAACA 59.267 52.632 0.00 0.00 0.00 3.33
3280 9831 0.318107 CGCAACCAAGAAGCCAACAG 60.318 55.000 0.00 0.00 0.00 3.16
3281 9832 1.032014 GCAACCAAGAAGCCAACAGA 58.968 50.000 0.00 0.00 0.00 3.41
3282 9833 1.408702 GCAACCAAGAAGCCAACAGAA 59.591 47.619 0.00 0.00 0.00 3.02
3283 9834 2.799562 GCAACCAAGAAGCCAACAGAAC 60.800 50.000 0.00 0.00 0.00 3.01
3284 9835 1.692411 ACCAAGAAGCCAACAGAACC 58.308 50.000 0.00 0.00 0.00 3.62
3285 9836 1.064017 ACCAAGAAGCCAACAGAACCA 60.064 47.619 0.00 0.00 0.00 3.67
3286 9837 1.610522 CCAAGAAGCCAACAGAACCAG 59.389 52.381 0.00 0.00 0.00 4.00
3287 9838 1.000938 CAAGAAGCCAACAGAACCAGC 60.001 52.381 0.00 0.00 0.00 4.85
3288 9839 0.886490 AGAAGCCAACAGAACCAGCG 60.886 55.000 0.00 0.00 0.00 5.18
3289 9840 0.884704 GAAGCCAACAGAACCAGCGA 60.885 55.000 0.00 0.00 0.00 4.93
3290 9841 1.166531 AAGCCAACAGAACCAGCGAC 61.167 55.000 0.00 0.00 0.00 5.19
3291 9842 2.954753 GCCAACAGAACCAGCGACG 61.955 63.158 0.00 0.00 0.00 5.12
3292 9843 1.594293 CCAACAGAACCAGCGACGT 60.594 57.895 0.00 0.00 0.00 4.34
3293 9844 1.557443 CCAACAGAACCAGCGACGTC 61.557 60.000 5.18 5.18 0.00 4.34
3294 9845 0.874175 CAACAGAACCAGCGACGTCA 60.874 55.000 17.16 0.00 0.00 4.35
3295 9846 0.874607 AACAGAACCAGCGACGTCAC 60.875 55.000 17.16 5.80 0.00 3.67
3296 9847 2.022129 CAGAACCAGCGACGTCACC 61.022 63.158 17.16 5.71 0.00 4.02
3297 9848 2.737376 GAACCAGCGACGTCACCC 60.737 66.667 17.16 2.98 0.00 4.61
3298 9849 3.509137 GAACCAGCGACGTCACCCA 62.509 63.158 17.16 0.00 0.00 4.51
3299 9850 3.802418 AACCAGCGACGTCACCCAC 62.802 63.158 17.16 0.00 0.00 4.61
3300 9851 4.293648 CCAGCGACGTCACCCACA 62.294 66.667 17.16 0.00 0.00 4.17
3301 9852 3.036084 CAGCGACGTCACCCACAC 61.036 66.667 17.16 0.00 0.00 3.82
3302 9853 4.295119 AGCGACGTCACCCACACC 62.295 66.667 17.16 0.00 0.00 4.16
3303 9854 4.595538 GCGACGTCACCCACACCA 62.596 66.667 17.16 0.00 0.00 4.17
3304 9855 2.107343 CGACGTCACCCACACCAA 59.893 61.111 17.16 0.00 0.00 3.67
3305 9856 2.241880 CGACGTCACCCACACCAAC 61.242 63.158 17.16 0.00 0.00 3.77
3306 9857 1.890510 GACGTCACCCACACCAACC 60.891 63.158 11.55 0.00 0.00 3.77
3307 9858 2.190843 CGTCACCCACACCAACCA 59.809 61.111 0.00 0.00 0.00 3.67
3308 9859 1.452289 CGTCACCCACACCAACCAA 60.452 57.895 0.00 0.00 0.00 3.67
3309 9860 1.032657 CGTCACCCACACCAACCAAA 61.033 55.000 0.00 0.00 0.00 3.28
3310 9861 0.744281 GTCACCCACACCAACCAAAG 59.256 55.000 0.00 0.00 0.00 2.77
3311 9862 1.040339 TCACCCACACCAACCAAAGC 61.040 55.000 0.00 0.00 0.00 3.51
3312 9863 1.000993 ACCCACACCAACCAAAGCA 59.999 52.632 0.00 0.00 0.00 3.91
3313 9864 1.326951 ACCCACACCAACCAAAGCAC 61.327 55.000 0.00 0.00 0.00 4.40
3314 9865 1.065600 CCACACCAACCAAAGCACG 59.934 57.895 0.00 0.00 0.00 5.34
3315 9866 1.588667 CACACCAACCAAAGCACGC 60.589 57.895 0.00 0.00 0.00 5.34
3316 9867 2.027460 CACCAACCAAAGCACGCC 59.973 61.111 0.00 0.00 0.00 5.68
3317 9868 3.223589 ACCAACCAAAGCACGCCC 61.224 61.111 0.00 0.00 0.00 6.13
3318 9869 2.912025 CCAACCAAAGCACGCCCT 60.912 61.111 0.00 0.00 0.00 5.19
3319 9870 2.336088 CAACCAAAGCACGCCCTG 59.664 61.111 0.00 0.00 0.00 4.45
3320 9871 2.192861 CAACCAAAGCACGCCCTGA 61.193 57.895 0.00 0.00 0.00 3.86
3321 9872 2.193536 AACCAAAGCACGCCCTGAC 61.194 57.895 0.00 0.00 0.00 3.51
3322 9873 3.365265 CCAAAGCACGCCCTGACC 61.365 66.667 0.00 0.00 0.00 4.02
3323 9874 2.594303 CAAAGCACGCCCTGACCA 60.594 61.111 0.00 0.00 0.00 4.02
3324 9875 1.973281 CAAAGCACGCCCTGACCAT 60.973 57.895 0.00 0.00 0.00 3.55
3325 9876 1.973281 AAAGCACGCCCTGACCATG 60.973 57.895 0.00 0.00 0.00 3.66
3326 9877 3.925630 AAGCACGCCCTGACCATGG 62.926 63.158 11.19 11.19 0.00 3.66
3327 9878 4.408821 GCACGCCCTGACCATGGA 62.409 66.667 21.47 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.484264 CCGCCGAACTTCTCATCTTTTT 59.516 45.455 0.00 0.00 0.00 1.94
13 14 2.076863 CCGCCGAACTTCTCATCTTTT 58.923 47.619 0.00 0.00 0.00 2.27
14 15 1.275291 TCCGCCGAACTTCTCATCTTT 59.725 47.619 0.00 0.00 0.00 2.52
15 16 0.895530 TCCGCCGAACTTCTCATCTT 59.104 50.000 0.00 0.00 0.00 2.40
16 17 0.457851 CTCCGCCGAACTTCTCATCT 59.542 55.000 0.00 0.00 0.00 2.90
17 18 0.173708 ACTCCGCCGAACTTCTCATC 59.826 55.000 0.00 0.00 0.00 2.92
18 19 0.608640 AACTCCGCCGAACTTCTCAT 59.391 50.000 0.00 0.00 0.00 2.90
19 20 0.038526 GAACTCCGCCGAACTTCTCA 60.039 55.000 0.00 0.00 0.00 3.27
20 21 0.038526 TGAACTCCGCCGAACTTCTC 60.039 55.000 0.00 0.00 0.00 2.87
21 22 0.038159 CTGAACTCCGCCGAACTTCT 60.038 55.000 0.00 0.00 0.00 2.85
22 23 0.319641 ACTGAACTCCGCCGAACTTC 60.320 55.000 0.00 0.00 0.00 3.01
23 24 0.319641 GACTGAACTCCGCCGAACTT 60.320 55.000 0.00 0.00 0.00 2.66
24 25 1.289380 GACTGAACTCCGCCGAACT 59.711 57.895 0.00 0.00 0.00 3.01
25 26 1.737008 GGACTGAACTCCGCCGAAC 60.737 63.158 0.00 0.00 0.00 3.95
26 27 0.609957 TAGGACTGAACTCCGCCGAA 60.610 55.000 0.00 0.00 35.20 4.30
27 28 0.395311 ATAGGACTGAACTCCGCCGA 60.395 55.000 0.00 0.00 35.20 5.54
28 29 0.460311 AATAGGACTGAACTCCGCCG 59.540 55.000 0.00 0.00 35.20 6.46
29 30 1.536284 CGAATAGGACTGAACTCCGCC 60.536 57.143 0.00 0.00 35.20 6.13
30 31 1.841450 CGAATAGGACTGAACTCCGC 58.159 55.000 0.00 0.00 35.20 5.54
31 32 1.134367 TGCGAATAGGACTGAACTCCG 59.866 52.381 0.00 0.00 35.20 4.63
32 33 2.427453 TCTGCGAATAGGACTGAACTCC 59.573 50.000 0.00 0.00 0.00 3.85
33 34 3.490078 CCTCTGCGAATAGGACTGAACTC 60.490 52.174 0.00 0.00 34.58 3.01
34 35 2.428890 CCTCTGCGAATAGGACTGAACT 59.571 50.000 0.00 0.00 34.58 3.01
35 36 2.166664 ACCTCTGCGAATAGGACTGAAC 59.833 50.000 0.89 0.00 36.66 3.18
36 37 2.427453 GACCTCTGCGAATAGGACTGAA 59.573 50.000 0.89 0.00 36.66 3.02
37 38 2.025155 GACCTCTGCGAATAGGACTGA 58.975 52.381 0.89 0.00 36.66 3.41
38 39 1.751351 TGACCTCTGCGAATAGGACTG 59.249 52.381 0.89 0.00 36.66 3.51
39 40 2.028130 CTGACCTCTGCGAATAGGACT 58.972 52.381 0.89 0.00 36.66 3.85
40 41 2.025155 TCTGACCTCTGCGAATAGGAC 58.975 52.381 0.89 0.00 36.66 3.85
41 42 2.302260 CTCTGACCTCTGCGAATAGGA 58.698 52.381 0.89 0.00 36.66 2.94
42 43 1.269517 GCTCTGACCTCTGCGAATAGG 60.270 57.143 0.00 0.00 38.93 2.57
43 44 1.406898 TGCTCTGACCTCTGCGAATAG 59.593 52.381 0.00 0.00 0.00 1.73
44 45 1.474330 TGCTCTGACCTCTGCGAATA 58.526 50.000 0.00 0.00 0.00 1.75
45 46 0.610174 TTGCTCTGACCTCTGCGAAT 59.390 50.000 0.00 0.00 0.00 3.34
46 47 0.392706 TTTGCTCTGACCTCTGCGAA 59.607 50.000 0.00 0.00 0.00 4.70
47 48 0.037882 CTTTGCTCTGACCTCTGCGA 60.038 55.000 0.00 0.00 0.00 5.10
48 49 0.320247 ACTTTGCTCTGACCTCTGCG 60.320 55.000 0.00 0.00 0.00 5.18
49 50 1.270518 TGACTTTGCTCTGACCTCTGC 60.271 52.381 0.00 0.00 0.00 4.26
87 88 5.089411 CGTCTGTGACTGTGATAGTACTTG 58.911 45.833 0.00 0.00 40.53 3.16
115 116 2.884207 GTTAGAACGAGGCGGGCG 60.884 66.667 0.00 0.00 0.00 6.13
116 117 2.098831 GTGTTAGAACGAGGCGGGC 61.099 63.158 0.00 0.00 0.00 6.13
117 118 1.447314 GGTGTTAGAACGAGGCGGG 60.447 63.158 0.00 0.00 0.00 6.13
118 119 1.012486 GTGGTGTTAGAACGAGGCGG 61.012 60.000 0.00 0.00 0.00 6.13
119 120 1.012486 GGTGGTGTTAGAACGAGGCG 61.012 60.000 0.00 0.00 0.00 5.52
124 125 0.032403 TGGACGGTGGTGTTAGAACG 59.968 55.000 0.00 0.00 0.00 3.95
159 160 1.444895 GCGGTTCTTTGGCATGCTG 60.445 57.895 18.92 5.96 0.00 4.41
161 162 2.504681 CGCGGTTCTTTGGCATGC 60.505 61.111 9.90 9.90 0.00 4.06
166 198 2.179018 CATGGCGCGGTTCTTTGG 59.821 61.111 8.83 0.00 0.00 3.28
181 213 0.816825 GGCACATCTGATCCGCACAT 60.817 55.000 9.34 0.00 0.00 3.21
182 214 1.450134 GGCACATCTGATCCGCACA 60.450 57.895 9.34 0.00 0.00 4.57
183 215 2.528743 CGGCACATCTGATCCGCAC 61.529 63.158 9.34 0.47 35.20 5.34
184 216 2.202919 CGGCACATCTGATCCGCA 60.203 61.111 9.34 0.00 35.20 5.69
186 218 2.107750 AGCGGCACATCTGATCCG 59.892 61.111 10.85 10.85 44.29 4.18
187 219 1.153289 ACAGCGGCACATCTGATCC 60.153 57.895 1.45 0.00 33.69 3.36
188 220 2.012237 CACAGCGGCACATCTGATC 58.988 57.895 1.45 0.00 33.69 2.92
189 221 2.110967 GCACAGCGGCACATCTGAT 61.111 57.895 1.45 0.00 33.69 2.90
190 222 2.743538 GCACAGCGGCACATCTGA 60.744 61.111 1.45 0.00 33.69 3.27
191 223 3.807538 GGCACAGCGGCACATCTG 61.808 66.667 1.45 0.00 40.76 2.90
206 238 3.360340 GCCTCCATATGCAGCGGC 61.360 66.667 0.31 0.31 41.68 6.53
208 240 3.046087 CCGCCTCCATATGCAGCG 61.046 66.667 19.34 19.34 46.04 5.18
212 244 4.626081 ACGGCCGCCTCCATATGC 62.626 66.667 28.58 0.00 0.00 3.14
331 3536 1.334243 CAGCGCCTACCTACTAGTGTC 59.666 57.143 2.29 0.00 0.00 3.67
635 6711 3.896133 GCGCATGGTCATGGCCAG 61.896 66.667 25.65 17.03 42.47 4.85
741 6827 2.033151 GGTGATTAACTAACGCGCCATC 60.033 50.000 5.73 0.00 0.00 3.51
807 6899 7.004086 TCTTGGCCCATTATTTATTGGACTAG 58.996 38.462 0.00 0.00 33.08 2.57
841 6936 3.192422 CCTTCTCCACTCTCACTGTACTG 59.808 52.174 0.00 0.00 0.00 2.74
921 7039 0.468585 TCGGAGGCGGCTTCCTATAA 60.469 55.000 26.01 8.57 36.38 0.98
943 7071 1.075536 GGGGAAAGGAAGGAGCAAAGA 59.924 52.381 0.00 0.00 0.00 2.52
945 7073 1.158007 AGGGGAAAGGAAGGAGCAAA 58.842 50.000 0.00 0.00 0.00 3.68
950 7078 0.332632 CATGCAGGGGAAAGGAAGGA 59.667 55.000 0.00 0.00 0.00 3.36
976 7104 4.315588 GCAGCAGCTGGATCAACT 57.684 55.556 24.13 0.00 37.91 3.16
993 7124 2.356793 GAGATCGCCATGCCGGAG 60.357 66.667 5.05 0.00 36.56 4.63
1137 7272 4.785453 GCGTGGCTTCCCTGAGGG 62.785 72.222 12.53 12.53 46.11 4.30
1590 7729 0.392193 TCCAGACGAGGTCGAGGTAC 60.392 60.000 6.35 0.00 43.02 3.34
1671 7810 2.506217 GCAATGGCGACGAGACGA 60.506 61.111 0.00 0.00 35.09 4.20
1672 7811 3.554692 GGCAATGGCGACGAGACG 61.555 66.667 0.00 0.00 42.47 4.18
1673 7812 1.369091 AATGGCAATGGCGACGAGAC 61.369 55.000 0.00 0.00 42.47 3.36
1674 7813 0.176910 TAATGGCAATGGCGACGAGA 59.823 50.000 0.00 0.00 42.47 4.04
1675 7814 0.304705 GTAATGGCAATGGCGACGAG 59.695 55.000 0.00 0.00 42.47 4.18
1714 7853 5.578727 CGATCTCCAGAGAAAAGAAAACGAT 59.421 40.000 0.66 0.00 41.36 3.73
1717 7856 6.237701 CGATCGATCTCCAGAGAAAAGAAAAC 60.238 42.308 22.43 0.00 41.36 2.43
1721 7860 4.035792 GTCGATCGATCTCCAGAGAAAAGA 59.964 45.833 22.50 5.59 41.36 2.52
1725 7864 1.867865 CGTCGATCGATCTCCAGAGAA 59.132 52.381 22.50 0.00 41.36 2.87
1727 7866 1.070242 CACGTCGATCGATCTCCAGAG 60.070 57.143 22.50 6.62 42.86 3.35
1730 7869 1.095807 AGCACGTCGATCGATCTCCA 61.096 55.000 22.50 4.29 42.86 3.86
1734 7873 0.584396 AGAGAGCACGTCGATCGATC 59.416 55.000 22.50 15.68 42.86 3.69
1784 7923 1.466950 CCTCGATCGGTAGAGAGATGC 59.533 57.143 16.41 0.00 36.65 3.91
1792 7931 0.591741 GTCAACGCCTCGATCGGTAG 60.592 60.000 16.41 6.03 0.00 3.18
1793 7932 1.430632 GTCAACGCCTCGATCGGTA 59.569 57.895 16.41 0.00 0.00 4.02
1794 7933 2.181021 GTCAACGCCTCGATCGGT 59.819 61.111 16.41 1.62 0.00 4.69
1795 7934 2.949678 CGTCAACGCCTCGATCGG 60.950 66.667 16.41 5.93 0.00 4.18
1799 7942 2.981909 ACCTCGTCAACGCCTCGA 60.982 61.111 0.00 0.00 39.60 4.04
2481 8640 3.167921 TGTGTGCGTGTTGTAACTAGT 57.832 42.857 0.00 0.00 0.00 2.57
2482 8641 3.664276 GCATGTGTGCGTGTTGTAACTAG 60.664 47.826 0.00 0.00 42.28 2.57
2543 9093 7.210873 AGCAATACGTATTCTTCTTCCCTAAG 58.789 38.462 17.82 3.79 0.00 2.18
2545 9095 6.726490 AGCAATACGTATTCTTCTTCCCTA 57.274 37.500 17.82 0.00 0.00 3.53
2561 9111 1.070134 TCCACCGGAGCATAGCAATAC 59.930 52.381 9.46 0.00 0.00 1.89
2562 9112 1.419381 TCCACCGGAGCATAGCAATA 58.581 50.000 9.46 0.00 0.00 1.90
2564 9114 0.546122 AATCCACCGGAGCATAGCAA 59.454 50.000 9.46 0.00 34.05 3.91
2584 9134 9.286946 CAACAAAATTACAGTTTAACACCGTAA 57.713 29.630 0.00 2.97 0.00 3.18
2587 9137 6.474102 AGCAACAAAATTACAGTTTAACACCG 59.526 34.615 0.00 0.00 0.00 4.94
2592 9142 8.988064 TTGACAGCAACAAAATTACAGTTTAA 57.012 26.923 0.00 0.00 0.00 1.52
2659 9210 2.809601 CAACCGGCCGAGAGTTCG 60.810 66.667 30.73 10.69 46.29 3.95
2660 9211 1.446272 CTCAACCGGCCGAGAGTTC 60.446 63.158 30.73 0.00 0.00 3.01
2661 9212 1.878656 CTCTCAACCGGCCGAGAGTT 61.879 60.000 29.82 19.92 46.72 3.01
2662 9213 2.282958 TCTCAACCGGCCGAGAGT 60.283 61.111 30.73 14.13 33.37 3.24
2663 9214 2.492090 CTCTCAACCGGCCGAGAG 59.508 66.667 30.73 27.28 46.76 3.20
2664 9215 3.760035 GCTCTCAACCGGCCGAGA 61.760 66.667 30.73 20.47 36.81 4.04
2665 9216 3.589654 TTGCTCTCAACCGGCCGAG 62.590 63.158 30.73 19.69 0.00 4.63
2666 9217 3.621805 TTGCTCTCAACCGGCCGA 61.622 61.111 30.73 5.11 0.00 5.54
2667 9218 3.423154 GTTGCTCTCAACCGGCCG 61.423 66.667 21.04 21.04 45.15 6.13
2674 9225 1.545841 TCGGCTAGAGTTGCTCTCAA 58.454 50.000 1.54 0.00 44.98 3.02
2675 9226 1.678627 GATCGGCTAGAGTTGCTCTCA 59.321 52.381 1.54 0.00 44.98 3.27
2676 9227 1.000717 GGATCGGCTAGAGTTGCTCTC 60.001 57.143 1.54 2.14 40.34 3.20
2677 9228 1.036707 GGATCGGCTAGAGTTGCTCT 58.963 55.000 4.02 4.02 43.83 4.09
2678 9229 0.032815 GGGATCGGCTAGAGTTGCTC 59.967 60.000 0.00 0.00 0.00 4.26
2679 9230 1.403687 GGGGATCGGCTAGAGTTGCT 61.404 60.000 0.00 0.00 0.00 3.91
2680 9231 1.069935 GGGGATCGGCTAGAGTTGC 59.930 63.158 0.00 0.00 0.00 4.17
2681 9232 1.996798 TAGGGGATCGGCTAGAGTTG 58.003 55.000 0.00 0.00 0.00 3.16
2682 9233 2.769602 TTAGGGGATCGGCTAGAGTT 57.230 50.000 0.00 0.00 0.00 3.01
2683 9234 2.177233 TCTTTAGGGGATCGGCTAGAGT 59.823 50.000 0.00 0.00 0.00 3.24
2684 9235 2.559231 GTCTTTAGGGGATCGGCTAGAG 59.441 54.545 0.00 0.00 0.00 2.43
2685 9236 2.177233 AGTCTTTAGGGGATCGGCTAGA 59.823 50.000 0.00 0.00 0.00 2.43
2686 9237 2.599677 AGTCTTTAGGGGATCGGCTAG 58.400 52.381 0.00 0.00 0.00 3.42
2687 9238 2.769602 AGTCTTTAGGGGATCGGCTA 57.230 50.000 0.00 0.00 0.00 3.93
2688 9239 2.317973 GTAGTCTTTAGGGGATCGGCT 58.682 52.381 0.00 0.00 0.00 5.52
2689 9240 1.000496 CGTAGTCTTTAGGGGATCGGC 60.000 57.143 0.00 0.00 0.00 5.54
2690 9241 1.000496 GCGTAGTCTTTAGGGGATCGG 60.000 57.143 0.00 0.00 0.00 4.18
2691 9242 1.000496 GGCGTAGTCTTTAGGGGATCG 60.000 57.143 0.00 0.00 0.00 3.69
2692 9243 1.343789 GGGCGTAGTCTTTAGGGGATC 59.656 57.143 0.00 0.00 0.00 3.36
2693 9244 1.062352 AGGGCGTAGTCTTTAGGGGAT 60.062 52.381 0.00 0.00 0.00 3.85
2694 9245 0.337428 AGGGCGTAGTCTTTAGGGGA 59.663 55.000 0.00 0.00 0.00 4.81
2695 9246 1.138464 GAAGGGCGTAGTCTTTAGGGG 59.862 57.143 0.00 0.00 0.00 4.79
2696 9247 1.202382 CGAAGGGCGTAGTCTTTAGGG 60.202 57.143 0.00 0.00 34.64 3.53
2697 9248 2.205307 CGAAGGGCGTAGTCTTTAGG 57.795 55.000 0.00 0.00 34.64 2.69
2722 9273 9.796120 CCAACAAAATTGAAAGTACACTCTTTA 57.204 29.630 0.00 0.00 37.70 1.85
2723 9274 8.311109 ACCAACAAAATTGAAAGTACACTCTTT 58.689 29.630 0.00 0.00 39.87 2.52
2724 9275 7.836842 ACCAACAAAATTGAAAGTACACTCTT 58.163 30.769 0.00 0.00 0.00 2.85
2725 9276 7.404671 ACCAACAAAATTGAAAGTACACTCT 57.595 32.000 0.00 0.00 0.00 3.24
2726 9277 9.233232 CTTACCAACAAAATTGAAAGTACACTC 57.767 33.333 0.00 0.00 0.00 3.51
2727 9278 8.745590 ACTTACCAACAAAATTGAAAGTACACT 58.254 29.630 0.00 0.00 0.00 3.55
2728 9279 8.920509 ACTTACCAACAAAATTGAAAGTACAC 57.079 30.769 0.00 0.00 0.00 2.90
2729 9280 8.740906 TGACTTACCAACAAAATTGAAAGTACA 58.259 29.630 0.00 5.74 30.83 2.90
2730 9281 9.575783 TTGACTTACCAACAAAATTGAAAGTAC 57.424 29.630 0.00 0.00 30.83 2.73
2732 9283 9.495572 TTTTGACTTACCAACAAAATTGAAAGT 57.504 25.926 0.00 6.92 38.17 2.66
2805 9356 9.981114 TGAATCTAATGCTACTAATTCGATGAA 57.019 29.630 0.00 0.00 0.00 2.57
2877 9428 9.674068 TGACCAAGTATGTGCAAAACTATATTA 57.326 29.630 0.00 0.00 0.00 0.98
2878 9429 8.574251 TGACCAAGTATGTGCAAAACTATATT 57.426 30.769 0.00 0.00 0.00 1.28
2879 9430 8.574251 TTGACCAAGTATGTGCAAAACTATAT 57.426 30.769 0.00 0.00 0.00 0.86
2880 9431 7.987750 TTGACCAAGTATGTGCAAAACTATA 57.012 32.000 0.00 0.00 0.00 1.31
2881 9432 6.892658 TTGACCAAGTATGTGCAAAACTAT 57.107 33.333 0.00 0.00 0.00 2.12
2882 9433 6.714810 AGATTGACCAAGTATGTGCAAAACTA 59.285 34.615 0.00 0.00 0.00 2.24
2883 9434 5.536161 AGATTGACCAAGTATGTGCAAAACT 59.464 36.000 0.00 0.00 0.00 2.66
2884 9435 5.772521 AGATTGACCAAGTATGTGCAAAAC 58.227 37.500 0.00 0.00 0.00 2.43
2885 9436 6.403866 AAGATTGACCAAGTATGTGCAAAA 57.596 33.333 0.00 0.00 0.00 2.44
2886 9437 6.040278 TCAAAGATTGACCAAGTATGTGCAAA 59.960 34.615 0.00 0.00 34.08 3.68
2887 9438 5.534278 TCAAAGATTGACCAAGTATGTGCAA 59.466 36.000 0.00 0.00 34.08 4.08
2888 9439 5.069318 TCAAAGATTGACCAAGTATGTGCA 58.931 37.500 0.00 0.00 34.08 4.57
2889 9440 5.412594 TCTCAAAGATTGACCAAGTATGTGC 59.587 40.000 0.00 0.00 35.46 4.57
2890 9441 7.621428 ATCTCAAAGATTGACCAAGTATGTG 57.379 36.000 0.00 0.00 35.46 3.21
2891 9442 9.911788 AATATCTCAAAGATTGACCAAGTATGT 57.088 29.630 0.00 0.00 36.20 2.29
2895 9446 9.300681 TCAAAATATCTCAAAGATTGACCAAGT 57.699 29.630 0.00 0.00 36.20 3.16
2896 9447 9.565213 GTCAAAATATCTCAAAGATTGACCAAG 57.435 33.333 8.81 0.00 35.81 3.61
2897 9448 9.076781 TGTCAAAATATCTCAAAGATTGACCAA 57.923 29.630 14.10 0.00 38.65 3.67
2898 9449 8.634335 TGTCAAAATATCTCAAAGATTGACCA 57.366 30.769 14.10 5.00 38.65 4.02
2916 9467 9.050601 ACTTTCAACTTTGTTGAAATGTCAAAA 57.949 25.926 27.59 11.90 45.29 2.44
2917 9468 8.600449 ACTTTCAACTTTGTTGAAATGTCAAA 57.400 26.923 27.59 12.43 45.29 2.69
2918 9469 9.134734 GTACTTTCAACTTTGTTGAAATGTCAA 57.865 29.630 27.59 15.97 44.41 3.18
2919 9470 8.300286 TGTACTTTCAACTTTGTTGAAATGTCA 58.700 29.630 27.59 22.96 44.41 3.58
2920 9471 8.583765 GTGTACTTTCAACTTTGTTGAAATGTC 58.416 33.333 27.59 21.51 44.41 3.06
2921 9472 8.303876 AGTGTACTTTCAACTTTGTTGAAATGT 58.696 29.630 27.59 26.11 44.41 2.71
2922 9473 8.687824 AGTGTACTTTCAACTTTGTTGAAATG 57.312 30.769 27.59 23.48 44.41 2.32
2923 9474 9.705290 AAAGTGTACTTTCAACTTTGTTGAAAT 57.295 25.926 27.59 21.46 44.41 2.17
2924 9475 9.535878 AAAAGTGTACTTTCAACTTTGTTGAAA 57.464 25.926 26.46 26.46 44.69 2.69
2925 9476 9.535878 AAAAAGTGTACTTTCAACTTTGTTGAA 57.464 25.926 18.28 18.28 44.69 2.69
2926 9477 9.187455 GAAAAAGTGTACTTTCAACTTTGTTGA 57.813 29.630 10.16 8.81 44.69 3.18
2927 9478 8.973378 TGAAAAAGTGTACTTTCAACTTTGTTG 58.027 29.630 10.16 4.25 44.69 3.33
2928 9479 9.535878 TTGAAAAAGTGTACTTTCAACTTTGTT 57.464 25.926 13.70 8.63 44.69 2.83
2929 9480 9.191995 CTTGAAAAAGTGTACTTTCAACTTTGT 57.808 29.630 13.70 7.22 44.69 2.83
2930 9481 9.191995 ACTTGAAAAAGTGTACTTTCAACTTTG 57.808 29.630 13.70 8.86 44.69 2.77
2932 9483 9.836076 GTACTTGAAAAAGTGTACTTTCAACTT 57.164 29.630 13.70 3.79 44.69 2.66
2933 9484 8.173130 CGTACTTGAAAAAGTGTACTTTCAACT 58.827 33.333 13.70 9.49 44.69 3.16
2934 9485 7.427318 CCGTACTTGAAAAAGTGTACTTTCAAC 59.573 37.037 13.70 7.28 44.69 3.18
2935 9486 7.333921 TCCGTACTTGAAAAAGTGTACTTTCAA 59.666 33.333 15.77 15.77 44.69 2.69
2936 9487 6.817641 TCCGTACTTGAAAAAGTGTACTTTCA 59.182 34.615 10.16 4.40 44.69 2.69
2937 9488 7.237920 TCCGTACTTGAAAAAGTGTACTTTC 57.762 36.000 10.16 0.74 44.69 2.62
2939 9490 5.756833 CCTCCGTACTTGAAAAAGTGTACTT 59.243 40.000 1.42 0.00 37.91 2.24
2940 9491 5.295152 CCTCCGTACTTGAAAAAGTGTACT 58.705 41.667 1.42 0.00 34.75 2.73
2941 9492 4.450080 CCCTCCGTACTTGAAAAAGTGTAC 59.550 45.833 1.42 0.00 34.37 2.90
2942 9493 4.344679 TCCCTCCGTACTTGAAAAAGTGTA 59.655 41.667 1.42 0.00 34.37 2.90
2943 9494 3.135167 TCCCTCCGTACTTGAAAAAGTGT 59.865 43.478 1.42 0.00 34.37 3.55
2944 9495 3.735591 TCCCTCCGTACTTGAAAAAGTG 58.264 45.455 1.42 0.00 34.37 3.16
2945 9496 3.390311 ACTCCCTCCGTACTTGAAAAAGT 59.610 43.478 0.00 0.00 36.82 2.66
2946 9497 4.004196 ACTCCCTCCGTACTTGAAAAAG 57.996 45.455 0.00 0.00 0.00 2.27
2947 9498 5.750352 ATACTCCCTCCGTACTTGAAAAA 57.250 39.130 0.00 0.00 0.00 1.94
2948 9499 6.855763 TTATACTCCCTCCGTACTTGAAAA 57.144 37.500 0.00 0.00 0.00 2.29
2949 9500 8.537728 TTATTATACTCCCTCCGTACTTGAAA 57.462 34.615 0.00 0.00 0.00 2.69
2950 9501 8.537728 TTTATTATACTCCCTCCGTACTTGAA 57.462 34.615 0.00 0.00 0.00 2.69
2951 9502 8.537728 TTTTATTATACTCCCTCCGTACTTGA 57.462 34.615 0.00 0.00 0.00 3.02
2952 9503 8.636213 TCTTTTATTATACTCCCTCCGTACTTG 58.364 37.037 0.00 0.00 0.00 3.16
2953 9504 8.773033 TCTTTTATTATACTCCCTCCGTACTT 57.227 34.615 0.00 0.00 0.00 2.24
2954 9505 8.003629 ACTCTTTTATTATACTCCCTCCGTACT 58.996 37.037 0.00 0.00 0.00 2.73
2955 9506 8.175925 ACTCTTTTATTATACTCCCTCCGTAC 57.824 38.462 0.00 0.00 0.00 3.67
2956 9507 9.866655 TTACTCTTTTATTATACTCCCTCCGTA 57.133 33.333 0.00 0.00 0.00 4.02
2957 9508 8.773033 TTACTCTTTTATTATACTCCCTCCGT 57.227 34.615 0.00 0.00 0.00 4.69
2983 9534 8.523658 GCCTGTTAGAGGAGTAAAATCAAAATT 58.476 33.333 0.00 0.00 46.33 1.82
2984 9535 7.669722 TGCCTGTTAGAGGAGTAAAATCAAAAT 59.330 33.333 0.00 0.00 46.33 1.82
2985 9536 7.001674 TGCCTGTTAGAGGAGTAAAATCAAAA 58.998 34.615 0.00 0.00 46.33 2.44
2986 9537 6.430000 GTGCCTGTTAGAGGAGTAAAATCAAA 59.570 38.462 0.00 0.00 46.33 2.69
2987 9538 5.938125 GTGCCTGTTAGAGGAGTAAAATCAA 59.062 40.000 0.00 0.00 46.33 2.57
2988 9539 5.488341 GTGCCTGTTAGAGGAGTAAAATCA 58.512 41.667 0.00 0.00 46.33 2.57
2989 9540 4.876679 GGTGCCTGTTAGAGGAGTAAAATC 59.123 45.833 0.00 0.00 46.33 2.17
2990 9541 4.536489 AGGTGCCTGTTAGAGGAGTAAAAT 59.464 41.667 0.00 0.00 46.33 1.82
2991 9542 3.908103 AGGTGCCTGTTAGAGGAGTAAAA 59.092 43.478 0.00 0.00 46.33 1.52
2992 9543 3.260884 CAGGTGCCTGTTAGAGGAGTAAA 59.739 47.826 9.96 0.00 46.33 2.01
2993 9544 2.832129 CAGGTGCCTGTTAGAGGAGTAA 59.168 50.000 9.96 0.00 46.33 2.24
2994 9545 2.457598 CAGGTGCCTGTTAGAGGAGTA 58.542 52.381 9.96 0.00 46.33 2.59
2995 9546 1.270907 CAGGTGCCTGTTAGAGGAGT 58.729 55.000 9.96 0.00 46.33 3.85
2996 9547 0.539051 CCAGGTGCCTGTTAGAGGAG 59.461 60.000 16.15 0.00 46.33 3.69
2997 9548 1.553690 GCCAGGTGCCTGTTAGAGGA 61.554 60.000 16.15 0.00 46.33 3.71
2998 9549 1.078143 GCCAGGTGCCTGTTAGAGG 60.078 63.158 16.15 2.03 46.13 3.69
2999 9550 4.625800 GCCAGGTGCCTGTTAGAG 57.374 61.111 16.15 2.80 42.15 2.43
3008 9559 1.452833 GAGGAGATTGGCCAGGTGC 60.453 63.158 5.11 0.00 40.16 5.01
3009 9560 0.329261 TTGAGGAGATTGGCCAGGTG 59.671 55.000 5.11 0.00 0.00 4.00
3010 9561 0.622665 CTTGAGGAGATTGGCCAGGT 59.377 55.000 5.11 0.00 0.00 4.00
3011 9562 0.622665 ACTTGAGGAGATTGGCCAGG 59.377 55.000 5.11 0.00 0.00 4.45
3012 9563 1.681166 CCACTTGAGGAGATTGGCCAG 60.681 57.143 5.11 0.00 0.00 4.85
3013 9564 0.329261 CCACTTGAGGAGATTGGCCA 59.671 55.000 0.00 0.00 0.00 5.36
3014 9565 0.329596 ACCACTTGAGGAGATTGGCC 59.670 55.000 0.00 0.00 0.00 5.36
3015 9566 2.206576 AACCACTTGAGGAGATTGGC 57.793 50.000 0.00 0.00 0.00 4.52
3016 9567 3.370953 CCCTAACCACTTGAGGAGATTGG 60.371 52.174 0.00 0.00 31.45 3.16
3017 9568 3.370953 CCCCTAACCACTTGAGGAGATTG 60.371 52.174 0.00 0.00 31.45 2.67
3018 9569 2.846827 CCCCTAACCACTTGAGGAGATT 59.153 50.000 0.00 0.00 31.45 2.40
3019 9570 2.045885 TCCCCTAACCACTTGAGGAGAT 59.954 50.000 0.00 0.00 31.45 2.75
3020 9571 1.435563 TCCCCTAACCACTTGAGGAGA 59.564 52.381 0.00 0.00 31.45 3.71
3021 9572 1.834263 CTCCCCTAACCACTTGAGGAG 59.166 57.143 0.00 0.00 33.99 3.69
3022 9573 1.151413 ACTCCCCTAACCACTTGAGGA 59.849 52.381 0.00 0.00 31.45 3.71
3023 9574 1.657804 ACTCCCCTAACCACTTGAGG 58.342 55.000 0.00 0.00 0.00 3.86
3024 9575 4.903045 TTTACTCCCCTAACCACTTGAG 57.097 45.455 0.00 0.00 0.00 3.02
3025 9576 5.853572 AATTTACTCCCCTAACCACTTGA 57.146 39.130 0.00 0.00 0.00 3.02
3026 9577 6.911250 AAAATTTACTCCCCTAACCACTTG 57.089 37.500 0.00 0.00 0.00 3.16
3049 9600 5.655532 ACTCTACGGATAGGCTGAGTAAAAA 59.344 40.000 0.00 0.00 33.67 1.94
3050 9601 5.198965 ACTCTACGGATAGGCTGAGTAAAA 58.801 41.667 0.00 0.00 33.67 1.52
3051 9602 4.789807 ACTCTACGGATAGGCTGAGTAAA 58.210 43.478 0.00 0.00 33.67 2.01
3052 9603 4.434545 ACTCTACGGATAGGCTGAGTAA 57.565 45.455 0.00 0.00 33.67 2.24
3053 9604 5.557576 TTACTCTACGGATAGGCTGAGTA 57.442 43.478 0.00 0.55 36.39 2.59
3054 9605 4.434545 TTACTCTACGGATAGGCTGAGT 57.565 45.455 0.00 1.63 38.21 3.41
3055 9606 5.968528 ATTTACTCTACGGATAGGCTGAG 57.031 43.478 0.00 0.00 0.00 3.35
3056 9607 8.327271 AGTATATTTACTCTACGGATAGGCTGA 58.673 37.037 0.00 0.00 33.18 4.26
3057 9608 8.508883 AGTATATTTACTCTACGGATAGGCTG 57.491 38.462 0.00 0.00 33.18 4.85
3068 9619 7.668886 AGCTAAAGGCCGAGTATATTTACTCTA 59.331 37.037 17.73 5.21 44.71 2.43
3069 9620 6.494146 AGCTAAAGGCCGAGTATATTTACTCT 59.506 38.462 17.73 4.46 44.71 3.24
3070 9621 6.586844 CAGCTAAAGGCCGAGTATATTTACTC 59.413 42.308 11.99 11.99 43.40 2.59
3071 9622 6.267014 TCAGCTAAAGGCCGAGTATATTTACT 59.733 38.462 0.00 0.00 40.64 2.24
3072 9623 6.365518 GTCAGCTAAAGGCCGAGTATATTTAC 59.634 42.308 0.00 0.00 43.05 2.01
3073 9624 6.453092 GTCAGCTAAAGGCCGAGTATATTTA 58.547 40.000 0.00 0.00 43.05 1.40
3074 9625 5.298347 GTCAGCTAAAGGCCGAGTATATTT 58.702 41.667 0.00 0.00 43.05 1.40
3075 9626 4.262506 GGTCAGCTAAAGGCCGAGTATATT 60.263 45.833 0.00 0.00 43.05 1.28
3076 9627 3.258622 GGTCAGCTAAAGGCCGAGTATAT 59.741 47.826 0.00 0.00 43.05 0.86
3077 9628 2.626743 GGTCAGCTAAAGGCCGAGTATA 59.373 50.000 0.00 0.00 43.05 1.47
3078 9629 1.413077 GGTCAGCTAAAGGCCGAGTAT 59.587 52.381 0.00 0.00 43.05 2.12
3079 9630 0.822164 GGTCAGCTAAAGGCCGAGTA 59.178 55.000 0.00 0.00 43.05 2.59
3080 9631 1.597461 GGTCAGCTAAAGGCCGAGT 59.403 57.895 0.00 0.00 43.05 4.18
3081 9632 1.519455 CGGTCAGCTAAAGGCCGAG 60.519 63.158 9.85 0.00 44.57 4.63
3082 9633 2.577059 CGGTCAGCTAAAGGCCGA 59.423 61.111 9.85 0.00 44.57 5.54
3083 9634 1.519455 CTCGGTCAGCTAAAGGCCG 60.519 63.158 9.18 9.18 43.05 6.13
3084 9635 0.822164 TACTCGGTCAGCTAAAGGCC 59.178 55.000 0.00 0.00 43.05 5.19
3085 9636 2.667473 TTACTCGGTCAGCTAAAGGC 57.333 50.000 0.00 0.00 42.19 4.35
3086 9637 5.420409 AGATTTTACTCGGTCAGCTAAAGG 58.580 41.667 0.00 0.00 0.00 3.11
3087 9638 7.221067 CACTAGATTTTACTCGGTCAGCTAAAG 59.779 40.741 0.00 0.00 0.00 1.85
3088 9639 7.033791 CACTAGATTTTACTCGGTCAGCTAAA 58.966 38.462 0.00 0.00 0.00 1.85
3089 9640 6.405508 CCACTAGATTTTACTCGGTCAGCTAA 60.406 42.308 0.00 0.00 0.00 3.09
3090 9641 5.067413 CCACTAGATTTTACTCGGTCAGCTA 59.933 44.000 0.00 0.00 0.00 3.32
3091 9642 4.142138 CCACTAGATTTTACTCGGTCAGCT 60.142 45.833 0.00 0.00 0.00 4.24
3092 9643 4.113354 CCACTAGATTTTACTCGGTCAGC 58.887 47.826 0.00 0.00 0.00 4.26
3093 9644 4.113354 GCCACTAGATTTTACTCGGTCAG 58.887 47.826 0.00 0.00 0.00 3.51
3094 9645 3.767673 AGCCACTAGATTTTACTCGGTCA 59.232 43.478 0.00 0.00 0.00 4.02
3095 9646 4.388378 AGCCACTAGATTTTACTCGGTC 57.612 45.455 0.00 0.00 0.00 4.79
3096 9647 4.820894 AAGCCACTAGATTTTACTCGGT 57.179 40.909 0.00 0.00 0.00 4.69
3097 9648 4.571176 GGAAAGCCACTAGATTTTACTCGG 59.429 45.833 0.00 0.00 0.00 4.63
3098 9649 5.420409 AGGAAAGCCACTAGATTTTACTCG 58.580 41.667 0.00 0.00 36.29 4.18
3099 9650 5.520649 CGAGGAAAGCCACTAGATTTTACTC 59.479 44.000 0.00 6.05 37.21 2.59
3100 9651 5.420409 CGAGGAAAGCCACTAGATTTTACT 58.580 41.667 0.00 0.00 36.29 2.24
3101 9652 4.034163 GCGAGGAAAGCCACTAGATTTTAC 59.966 45.833 0.00 0.00 36.29 2.01
3102 9653 4.189231 GCGAGGAAAGCCACTAGATTTTA 58.811 43.478 0.00 0.00 36.29 1.52
3103 9654 3.010420 GCGAGGAAAGCCACTAGATTTT 58.990 45.455 0.00 0.00 36.29 1.82
3104 9655 2.633488 GCGAGGAAAGCCACTAGATTT 58.367 47.619 0.00 0.00 36.29 2.17
3105 9656 2.317530 GCGAGGAAAGCCACTAGATT 57.682 50.000 0.00 0.00 36.29 2.40
3114 9665 4.491409 GGAGGGGGCGAGGAAAGC 62.491 72.222 0.00 0.00 0.00 3.51
3115 9666 4.162690 CGGAGGGGGCGAGGAAAG 62.163 72.222 0.00 0.00 0.00 2.62
3116 9667 4.707768 TCGGAGGGGGCGAGGAAA 62.708 66.667 0.00 0.00 0.00 3.13
3123 9674 3.716204 GATTTGGGTCGGAGGGGGC 62.716 68.421 0.00 0.00 0.00 5.80
3124 9675 2.001269 AGATTTGGGTCGGAGGGGG 61.001 63.158 0.00 0.00 0.00 5.40
3125 9676 1.224592 CAGATTTGGGTCGGAGGGG 59.775 63.158 0.00 0.00 0.00 4.79
3126 9677 1.452108 GCAGATTTGGGTCGGAGGG 60.452 63.158 0.00 0.00 0.00 4.30
3127 9678 1.452108 GGCAGATTTGGGTCGGAGG 60.452 63.158 0.00 0.00 0.00 4.30
3128 9679 1.815421 CGGCAGATTTGGGTCGGAG 60.815 63.158 0.00 0.00 0.00 4.63
3129 9680 2.267642 CGGCAGATTTGGGTCGGA 59.732 61.111 0.00 0.00 0.00 4.55
3130 9681 3.508840 GCGGCAGATTTGGGTCGG 61.509 66.667 0.00 0.00 0.00 4.79
3131 9682 2.436646 AGCGGCAGATTTGGGTCG 60.437 61.111 1.45 0.00 0.00 4.79
3132 9683 3.056313 GCAGCGGCAGATTTGGGTC 62.056 63.158 3.18 0.00 40.72 4.46
3133 9684 3.064324 GCAGCGGCAGATTTGGGT 61.064 61.111 3.18 0.00 40.72 4.51
3143 9694 3.589881 GTGATGGGATGCAGCGGC 61.590 66.667 0.31 0.31 41.68 6.53
3144 9695 2.903855 GGTGATGGGATGCAGCGG 60.904 66.667 0.00 0.00 0.00 5.52
3145 9696 2.124612 TGGTGATGGGATGCAGCG 60.125 61.111 0.00 0.00 35.41 5.18
3146 9697 2.487532 GCTGGTGATGGGATGCAGC 61.488 63.158 0.00 0.00 0.00 5.25
3147 9698 0.818445 GAGCTGGTGATGGGATGCAG 60.818 60.000 0.00 0.00 0.00 4.41
3148 9699 1.225426 GAGCTGGTGATGGGATGCA 59.775 57.895 0.00 0.00 0.00 3.96
3149 9700 1.527844 GGAGCTGGTGATGGGATGC 60.528 63.158 0.00 0.00 0.00 3.91
3150 9701 1.227764 CGGAGCTGGTGATGGGATG 60.228 63.158 0.00 0.00 0.00 3.51
3151 9702 3.234349 CGGAGCTGGTGATGGGAT 58.766 61.111 0.00 0.00 0.00 3.85
3171 9722 4.039092 CAGAGGTGGTGGCCCAGG 62.039 72.222 0.00 0.00 42.94 4.45
3172 9723 1.903877 CTACAGAGGTGGTGGCCCAG 61.904 65.000 0.00 0.00 42.94 4.45
3173 9724 1.918293 CTACAGAGGTGGTGGCCCA 60.918 63.158 0.00 0.00 38.87 5.36
3174 9725 2.990479 CTACAGAGGTGGTGGCCC 59.010 66.667 0.00 0.00 0.00 5.80
3175 9726 2.269241 GCTACAGAGGTGGTGGCC 59.731 66.667 0.00 0.00 36.83 5.36
3176 9727 2.125512 CGCTACAGAGGTGGTGGC 60.126 66.667 0.00 0.00 39.11 5.01
3177 9728 1.215647 GACGCTACAGAGGTGGTGG 59.784 63.158 0.00 0.00 39.98 4.61
3178 9729 1.215647 GGACGCTACAGAGGTGGTG 59.784 63.158 0.00 0.00 41.28 4.17
3179 9730 1.982938 GGGACGCTACAGAGGTGGT 60.983 63.158 0.00 0.00 0.00 4.16
3180 9731 1.982395 TGGGACGCTACAGAGGTGG 60.982 63.158 0.00 0.00 0.00 4.61
3181 9732 1.215647 GTGGGACGCTACAGAGGTG 59.784 63.158 0.00 0.00 35.02 4.00
3182 9733 1.982938 GGTGGGACGCTACAGAGGT 60.983 63.158 0.00 0.00 39.78 3.85
3183 9734 2.722201 GGGTGGGACGCTACAGAGG 61.722 68.421 0.00 0.00 39.78 3.69
3184 9735 2.722201 GGGGTGGGACGCTACAGAG 61.722 68.421 0.00 0.00 39.78 3.35
3185 9736 2.682494 GGGGTGGGACGCTACAGA 60.682 66.667 0.00 0.00 39.78 3.41
3186 9737 1.838073 AAAGGGGTGGGACGCTACAG 61.838 60.000 0.00 0.00 39.78 2.74
3187 9738 1.844289 AAAGGGGTGGGACGCTACA 60.844 57.895 0.00 0.00 39.78 2.74
3188 9739 1.376812 CAAAGGGGTGGGACGCTAC 60.377 63.158 0.00 0.00 39.78 3.58
3189 9740 3.074281 CAAAGGGGTGGGACGCTA 58.926 61.111 0.00 0.00 39.78 4.26
3190 9741 4.660938 GCAAAGGGGTGGGACGCT 62.661 66.667 0.00 0.00 39.78 5.07
3201 9752 4.415332 CTGCAGCAGCGGCAAAGG 62.415 66.667 21.14 6.28 46.23 3.11
3202 9753 4.415332 CCTGCAGCAGCGGCAAAG 62.415 66.667 21.14 11.74 46.03 2.77
3203 9754 4.953010 TCCTGCAGCAGCGGCAAA 62.953 61.111 21.14 9.69 46.03 3.68
3207 9758 2.263741 AAAACTCCTGCAGCAGCGG 61.264 57.895 17.81 13.34 46.23 5.52
3208 9759 1.081641 CAAAACTCCTGCAGCAGCG 60.082 57.895 17.81 12.21 46.23 5.18
3209 9760 1.372623 GCAAAACTCCTGCAGCAGC 60.373 57.895 17.81 0.00 39.69 5.25
3210 9761 2.035421 TGCAAAACTCCTGCAGCAG 58.965 52.632 16.23 16.23 44.67 4.24
3211 9762 4.256462 TGCAAAACTCCTGCAGCA 57.744 50.000 8.66 0.00 44.67 4.41
3215 9766 1.372623 GCAGCTGCAAAACTCCTGC 60.373 57.895 33.36 1.56 41.57 4.85
3216 9767 1.081641 CGCAGCTGCAAAACTCCTG 60.082 57.895 36.03 14.34 42.21 3.86
3217 9768 2.263741 CCGCAGCTGCAAAACTCCT 61.264 57.895 36.03 0.00 42.21 3.69
3218 9769 1.234615 TACCGCAGCTGCAAAACTCC 61.235 55.000 36.03 6.57 42.21 3.85
3219 9770 0.166814 CTACCGCAGCTGCAAAACTC 59.833 55.000 36.03 7.35 42.21 3.01
3220 9771 1.237285 CCTACCGCAGCTGCAAAACT 61.237 55.000 36.03 16.15 42.21 2.66
3221 9772 1.210155 CCTACCGCAGCTGCAAAAC 59.790 57.895 36.03 8.88 42.21 2.43
3222 9773 1.072332 TCCTACCGCAGCTGCAAAA 59.928 52.632 36.03 19.78 42.21 2.44
3223 9774 1.671054 GTCCTACCGCAGCTGCAAA 60.671 57.895 36.03 20.13 42.21 3.68
3224 9775 2.047274 GTCCTACCGCAGCTGCAA 60.047 61.111 36.03 20.48 42.21 4.08
3225 9776 4.435436 CGTCCTACCGCAGCTGCA 62.435 66.667 36.03 17.83 42.21 4.41
3242 9793 3.093278 CTTCATGGGTCGCTTCGC 58.907 61.111 0.00 0.00 0.00 4.70
3243 9794 2.464459 GGCTTCATGGGTCGCTTCG 61.464 63.158 0.00 0.00 0.00 3.79
3244 9795 2.464459 CGGCTTCATGGGTCGCTTC 61.464 63.158 0.00 0.00 0.00 3.86
3245 9796 2.436646 CGGCTTCATGGGTCGCTT 60.437 61.111 0.00 0.00 0.00 4.68
3248 9799 2.745884 TTGCGGCTTCATGGGTCG 60.746 61.111 0.00 8.74 0.00 4.79
3249 9800 2.700773 GGTTGCGGCTTCATGGGTC 61.701 63.158 0.00 0.00 0.00 4.46
3250 9801 2.676471 GGTTGCGGCTTCATGGGT 60.676 61.111 0.00 0.00 0.00 4.51
3251 9802 2.216750 CTTGGTTGCGGCTTCATGGG 62.217 60.000 0.00 0.00 0.00 4.00
3252 9803 1.213537 CTTGGTTGCGGCTTCATGG 59.786 57.895 0.00 0.00 0.00 3.66
3253 9804 0.597568 TTCTTGGTTGCGGCTTCATG 59.402 50.000 0.00 0.00 0.00 3.07
3254 9805 0.883833 CTTCTTGGTTGCGGCTTCAT 59.116 50.000 0.00 0.00 0.00 2.57
3255 9806 1.795170 GCTTCTTGGTTGCGGCTTCA 61.795 55.000 0.00 0.00 0.00 3.02
3256 9807 1.081175 GCTTCTTGGTTGCGGCTTC 60.081 57.895 0.00 0.00 0.00 3.86
3257 9808 2.564721 GGCTTCTTGGTTGCGGCTT 61.565 57.895 0.00 0.00 0.00 4.35
3258 9809 2.985847 GGCTTCTTGGTTGCGGCT 60.986 61.111 0.00 0.00 0.00 5.52
3259 9810 2.855514 TTGGCTTCTTGGTTGCGGC 61.856 57.895 0.00 0.00 0.00 6.53
3260 9811 1.007387 GTTGGCTTCTTGGTTGCGG 60.007 57.895 0.00 0.00 0.00 5.69
3261 9812 0.318107 CTGTTGGCTTCTTGGTTGCG 60.318 55.000 0.00 0.00 0.00 4.85
3262 9813 1.032014 TCTGTTGGCTTCTTGGTTGC 58.968 50.000 0.00 0.00 0.00 4.17
3263 9814 2.223805 GGTTCTGTTGGCTTCTTGGTTG 60.224 50.000 0.00 0.00 0.00 3.77
3264 9815 2.031870 GGTTCTGTTGGCTTCTTGGTT 58.968 47.619 0.00 0.00 0.00 3.67
3265 9816 1.064017 TGGTTCTGTTGGCTTCTTGGT 60.064 47.619 0.00 0.00 0.00 3.67
3266 9817 1.610522 CTGGTTCTGTTGGCTTCTTGG 59.389 52.381 0.00 0.00 0.00 3.61
3267 9818 1.000938 GCTGGTTCTGTTGGCTTCTTG 60.001 52.381 0.00 0.00 0.00 3.02
3268 9819 1.322442 GCTGGTTCTGTTGGCTTCTT 58.678 50.000 0.00 0.00 0.00 2.52
3269 9820 0.886490 CGCTGGTTCTGTTGGCTTCT 60.886 55.000 0.00 0.00 0.00 2.85
3270 9821 0.884704 TCGCTGGTTCTGTTGGCTTC 60.885 55.000 0.00 0.00 0.00 3.86
3271 9822 1.148273 TCGCTGGTTCTGTTGGCTT 59.852 52.632 0.00 0.00 0.00 4.35
3272 9823 1.598130 GTCGCTGGTTCTGTTGGCT 60.598 57.895 0.00 0.00 0.00 4.75
3273 9824 2.946762 GTCGCTGGTTCTGTTGGC 59.053 61.111 0.00 0.00 0.00 4.52
3274 9825 1.557443 GACGTCGCTGGTTCTGTTGG 61.557 60.000 0.00 0.00 0.00 3.77
3275 9826 0.874175 TGACGTCGCTGGTTCTGTTG 60.874 55.000 11.62 0.00 0.00 3.33
3276 9827 0.874607 GTGACGTCGCTGGTTCTGTT 60.875 55.000 21.55 0.00 0.00 3.16
3277 9828 1.299926 GTGACGTCGCTGGTTCTGT 60.300 57.895 21.55 0.00 0.00 3.41
3278 9829 2.022129 GGTGACGTCGCTGGTTCTG 61.022 63.158 26.79 0.00 0.00 3.02
3279 9830 2.338984 GGTGACGTCGCTGGTTCT 59.661 61.111 26.79 0.00 0.00 3.01
3280 9831 2.737376 GGGTGACGTCGCTGGTTC 60.737 66.667 26.79 10.99 0.00 3.62
3281 9832 3.542676 TGGGTGACGTCGCTGGTT 61.543 61.111 26.79 0.00 0.00 3.67
3282 9833 4.295119 GTGGGTGACGTCGCTGGT 62.295 66.667 26.79 0.00 0.00 4.00
3283 9834 4.293648 TGTGGGTGACGTCGCTGG 62.294 66.667 26.79 0.00 0.00 4.85
3284 9835 3.036084 GTGTGGGTGACGTCGCTG 61.036 66.667 26.79 0.00 0.00 5.18
3285 9836 4.295119 GGTGTGGGTGACGTCGCT 62.295 66.667 26.79 0.00 0.00 4.93
3286 9837 4.595538 TGGTGTGGGTGACGTCGC 62.596 66.667 20.76 20.76 0.00 5.19
3287 9838 2.107343 TTGGTGTGGGTGACGTCG 59.893 61.111 11.62 0.00 0.00 5.12
3288 9839 1.890510 GGTTGGTGTGGGTGACGTC 60.891 63.158 9.11 9.11 0.00 4.34
3289 9840 2.191109 GGTTGGTGTGGGTGACGT 59.809 61.111 0.00 0.00 0.00 4.34
3290 9841 1.032657 TTTGGTTGGTGTGGGTGACG 61.033 55.000 0.00 0.00 0.00 4.35
3291 9842 0.744281 CTTTGGTTGGTGTGGGTGAC 59.256 55.000 0.00 0.00 0.00 3.67
3292 9843 1.040339 GCTTTGGTTGGTGTGGGTGA 61.040 55.000 0.00 0.00 0.00 4.02
3293 9844 1.326213 TGCTTTGGTTGGTGTGGGTG 61.326 55.000 0.00 0.00 0.00 4.61
3294 9845 1.000993 TGCTTTGGTTGGTGTGGGT 59.999 52.632 0.00 0.00 0.00 4.51
3295 9846 1.441311 GTGCTTTGGTTGGTGTGGG 59.559 57.895 0.00 0.00 0.00 4.61
3296 9847 1.065600 CGTGCTTTGGTTGGTGTGG 59.934 57.895 0.00 0.00 0.00 4.17
3297 9848 1.588667 GCGTGCTTTGGTTGGTGTG 60.589 57.895 0.00 0.00 0.00 3.82
3298 9849 2.781158 GGCGTGCTTTGGTTGGTGT 61.781 57.895 0.00 0.00 0.00 4.16
3299 9850 2.027460 GGCGTGCTTTGGTTGGTG 59.973 61.111 0.00 0.00 0.00 4.17
3300 9851 3.223589 GGGCGTGCTTTGGTTGGT 61.224 61.111 0.00 0.00 0.00 3.67
3301 9852 2.912025 AGGGCGTGCTTTGGTTGG 60.912 61.111 0.00 0.00 0.00 3.77
3302 9853 2.192861 TCAGGGCGTGCTTTGGTTG 61.193 57.895 1.51 0.00 0.00 3.77
3303 9854 2.193536 GTCAGGGCGTGCTTTGGTT 61.194 57.895 1.51 0.00 0.00 3.67
3304 9855 2.594592 GTCAGGGCGTGCTTTGGT 60.595 61.111 1.51 0.00 0.00 3.67
3305 9856 3.365265 GGTCAGGGCGTGCTTTGG 61.365 66.667 1.51 0.00 0.00 3.28
3306 9857 1.973281 ATGGTCAGGGCGTGCTTTG 60.973 57.895 1.51 0.00 0.00 2.77
3307 9858 1.973281 CATGGTCAGGGCGTGCTTT 60.973 57.895 1.51 0.00 0.00 3.51
3308 9859 2.360350 CATGGTCAGGGCGTGCTT 60.360 61.111 1.51 0.00 0.00 3.91
3309 9860 4.415150 CCATGGTCAGGGCGTGCT 62.415 66.667 2.57 0.00 0.00 4.40
3310 9861 4.408821 TCCATGGTCAGGGCGTGC 62.409 66.667 12.58 0.00 31.15 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.