Multiple sequence alignment - TraesCS3A01G426100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G426100 chr3A 100.000 3085 0 0 946 4030 668867318 668870402 0.000000e+00 5698.0
1 TraesCS3A01G426100 chr3A 93.718 2181 94 13 1408 3580 668818055 668820200 0.000000e+00 3229.0
2 TraesCS3A01G426100 chr3A 93.193 1763 88 10 1825 3580 668985957 668987694 0.000000e+00 2562.0
3 TraesCS3A01G426100 chr3A 93.137 1763 90 9 1825 3580 668981606 668983344 0.000000e+00 2556.0
4 TraesCS3A01G426100 chr3A 92.910 1763 94 9 1825 3580 668990301 668992039 0.000000e+00 2534.0
5 TraesCS3A01G426100 chr3A 100.000 544 0 0 1 544 668866373 668866916 0.000000e+00 1005.0
6 TraesCS3A01G426100 chr3A 89.577 710 66 6 1501 2204 669054035 669054742 0.000000e+00 894.0
7 TraesCS3A01G426100 chr3A 95.682 440 9 3 956 1387 668817631 668818068 0.000000e+00 699.0
8 TraesCS3A01G426100 chr3A 89.928 556 30 7 3146 3680 669055952 669056502 0.000000e+00 693.0
9 TraesCS3A01G426100 chr3A 94.787 422 22 0 1408 1829 668924685 668925106 0.000000e+00 658.0
10 TraesCS3A01G426100 chr3A 97.458 354 9 0 3677 4030 708252781 708252428 4.460000e-169 604.0
11 TraesCS3A01G426100 chr3A 92.000 425 34 0 120 544 668817180 668817604 7.460000e-167 597.0
12 TraesCS3A01G426100 chr3A 91.444 374 14 7 1021 1387 668924336 668924698 7.780000e-137 497.0
13 TraesCS3A01G426100 chr3A 82.258 372 42 2 120 491 669053674 669054021 2.350000e-77 300.0
14 TraesCS3A01G426100 chr3A 87.273 220 28 0 121 340 102677269 102677050 6.690000e-63 252.0
15 TraesCS3A01G426100 chr3A 86.878 221 29 0 120 340 717621019 717621239 8.650000e-62 248.0
16 TraesCS3A01G426100 chr3A 87.562 201 18 4 339 537 668924000 668924195 4.050000e-55 226.0
17 TraesCS3A01G426100 chr3A 96.639 119 4 0 1 119 21315796 21315914 8.830000e-47 198.0
18 TraesCS3A01G426100 chr3A 93.151 73 5 0 3595 3667 668983473 668983545 1.530000e-19 108.0
19 TraesCS3A01G426100 chr3A 93.151 73 5 0 3595 3667 668987823 668987895 1.530000e-19 108.0
20 TraesCS3A01G426100 chr3A 80.916 131 25 0 993 1123 669180031 669180161 1.980000e-18 104.0
21 TraesCS3A01G426100 chr3A 91.429 70 6 0 3595 3664 668820329 668820398 3.320000e-16 97.1
22 TraesCS3A01G426100 chr3D 92.368 2293 145 15 1408 3680 533393151 533395433 0.000000e+00 3238.0
23 TraesCS3A01G426100 chr3D 92.328 2294 146 15 1408 3680 533375381 533377665 0.000000e+00 3234.0
24 TraesCS3A01G426100 chr3D 93.333 2115 119 12 1475 3580 532991981 532994082 0.000000e+00 3105.0
25 TraesCS3A01G426100 chr3D 90.901 2319 152 26 1409 3680 533315043 533317349 0.000000e+00 3059.0
26 TraesCS3A01G426100 chr3D 88.459 1681 131 26 2041 3680 533411069 533412727 0.000000e+00 1971.0
27 TraesCS3A01G426100 chr3D 88.344 652 65 8 1560 2204 533410393 533411040 0.000000e+00 773.0
28 TraesCS3A01G426100 chr3D 96.163 443 15 2 946 1387 533314614 533315055 0.000000e+00 723.0
29 TraesCS3A01G426100 chr3D 96.089 358 12 2 3674 4029 336837089 336836732 2.090000e-162 582.0
30 TraesCS3A01G426100 chr3D 93.531 371 19 3 1021 1387 533392795 533393164 7.620000e-152 547.0
31 TraesCS3A01G426100 chr3D 92.992 371 21 3 1021 1387 533375025 533375394 1.650000e-148 536.0
32 TraesCS3A01G426100 chr3D 90.489 368 19 5 1021 1387 533407858 533408210 4.710000e-129 472.0
33 TraesCS3A01G426100 chr3D 88.515 357 32 8 1021 1374 532978008 532978358 1.340000e-114 424.0
34 TraesCS3A01G426100 chr3D 98.089 157 3 0 1408 1564 533408197 533408353 1.430000e-69 274.0
35 TraesCS3A01G426100 chr3D 89.573 211 17 4 339 544 533314329 533314539 3.090000e-66 263.0
36 TraesCS3A01G426100 chr3D 88.152 211 20 4 339 544 533392453 533392663 3.110000e-61 246.0
37 TraesCS3A01G426100 chr3D 88.038 209 20 4 339 542 533374683 533374891 4.020000e-60 243.0
38 TraesCS3A01G426100 chr3D 87.437 199 20 2 339 537 532977679 532977872 1.460000e-54 224.0
39 TraesCS3A01G426100 chr3D 92.045 88 5 1 3595 3680 532994211 532994298 5.470000e-24 122.0
40 TraesCS3A01G426100 chr3D 95.082 61 0 2 947 1004 533407802 533407862 4.290000e-15 93.5
41 TraesCS3A01G426100 chr3D 94.915 59 0 1 946 1001 533374968 533375026 5.550000e-14 89.8
42 TraesCS3A01G426100 chr3D 94.915 59 0 1 946 1001 533392738 533392796 5.550000e-14 89.8
43 TraesCS3A01G426100 chr3B 87.446 2079 162 44 1409 3452 705185226 705187240 0.000000e+00 2302.0
44 TraesCS3A01G426100 chr3B 92.722 371 18 4 1021 1387 705184873 705185238 9.920000e-146 527.0
45 TraesCS3A01G426100 chr3B 88.557 201 18 4 341 537 705184535 705184734 5.210000e-59 239.0
46 TraesCS3A01G426100 chr3B 93.548 62 1 1 946 1004 705184816 705184877 5.550000e-14 89.8
47 TraesCS3A01G426100 chr6A 96.369 358 12 1 3674 4030 27651745 27652102 4.490000e-164 588.0
48 TraesCS3A01G426100 chr6A 87.783 221 27 0 120 340 181909864 181910084 4.000000e-65 259.0
49 TraesCS3A01G426100 chr6A 86.878 221 29 0 120 340 57972533 57972753 8.650000e-62 248.0
50 TraesCS3A01G426100 chr7A 87.330 221 28 0 120 340 121631447 121631667 1.860000e-63 254.0
51 TraesCS3A01G426100 chr7A 87.395 119 4 6 1 119 54922358 54922465 4.230000e-25 126.0
52 TraesCS3A01G426100 chr2B 87.330 221 28 0 120 340 128265340 128265120 1.860000e-63 254.0
53 TraesCS3A01G426100 chr5A 86.425 221 30 0 120 340 704867292 704867072 4.020000e-60 243.0
54 TraesCS3A01G426100 chr5A 95.798 119 5 0 1 119 364168326 364168208 4.110000e-45 193.0
55 TraesCS3A01G426100 chr5A 88.430 121 3 5 1 121 34840801 34840910 7.030000e-28 135.0
56 TraesCS3A01G426100 chr4B 86.425 221 30 0 120 340 421735313 421735093 4.020000e-60 243.0
57 TraesCS3A01G426100 chr1A 97.479 119 2 1 1 119 532432832 532432949 6.830000e-48 202.0
58 TraesCS3A01G426100 chr4A 90.526 95 9 0 1 95 29382807 29382901 4.230000e-25 126.0
59 TraesCS3A01G426100 chr2D 89.583 96 9 1 20 115 565856750 565856656 1.970000e-23 121.0
60 TraesCS3A01G426100 chr2A 84.348 115 16 2 1 115 67721683 67721571 1.180000e-20 111.0
61 TraesCS3A01G426100 chr5B 90.588 85 4 4 44 126 611076582 611076500 4.260000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G426100 chr3A 668866373 668870402 4029 False 3351.500000 5698 100.000000 1 4030 2 chr3A.!!$F5 4029
1 TraesCS3A01G426100 chr3A 668981606 668992039 10433 False 1573.600000 2562 93.108400 1825 3667 5 chr3A.!!$F7 1842
2 TraesCS3A01G426100 chr3A 668817180 668820398 3218 False 1155.525000 3229 93.207250 120 3664 4 chr3A.!!$F4 3544
3 TraesCS3A01G426100 chr3A 669053674 669056502 2828 False 629.000000 894 87.254333 120 3680 3 chr3A.!!$F8 3560
4 TraesCS3A01G426100 chr3A 668924000 668925106 1106 False 460.333333 658 91.264333 339 1829 3 chr3A.!!$F6 1490
5 TraesCS3A01G426100 chr3D 532991981 532994298 2317 False 1613.500000 3105 92.689000 1475 3680 2 chr3D.!!$F2 2205
6 TraesCS3A01G426100 chr3D 533314329 533317349 3020 False 1348.333333 3059 92.212333 339 3680 3 chr3D.!!$F3 3341
7 TraesCS3A01G426100 chr3D 533392453 533395433 2980 False 1030.200000 3238 92.241500 339 3680 4 chr3D.!!$F5 3341
8 TraesCS3A01G426100 chr3D 533374683 533377665 2982 False 1025.700000 3234 92.068250 339 3680 4 chr3D.!!$F4 3341
9 TraesCS3A01G426100 chr3D 533407802 533412727 4925 False 716.700000 1971 92.092600 947 3680 5 chr3D.!!$F6 2733
10 TraesCS3A01G426100 chr3D 532977679 532978358 679 False 324.000000 424 87.976000 339 1374 2 chr3D.!!$F1 1035
11 TraesCS3A01G426100 chr3B 705184535 705187240 2705 False 789.450000 2302 90.568250 341 3452 4 chr3B.!!$F1 3111

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 137 0.105964 TGGTACAGACACAAGCGCTT 59.894 50.000 18.98 18.98 0.0 4.68 F
297 298 0.678950 CCTCCCACCAAAAACGCATT 59.321 50.000 0.00 0.00 0.0 3.56 F
1694 3797 1.004277 TGTTTGGGCAGATGGAGTACC 59.996 52.381 0.00 0.00 0.0 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1671 3774 0.890683 CTCCATCTGCCCAAACAACC 59.109 55.0 0.0 0.00 0.00 3.77 R
1696 3799 0.948623 TTGGTCGCCTCGTCATGTTG 60.949 55.0 0.0 0.00 0.00 3.33 R
3385 10166 0.450983 GTTCCTAGTCGGTCGACCAG 59.549 60.0 32.8 24.26 45.59 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.325870 GGCCATAACTTTCAAAACAGGC 58.674 45.455 0.00 0.00 38.84 4.85
22 23 3.006859 GGCCATAACTTTCAAAACAGGCT 59.993 43.478 0.00 0.00 39.48 4.58
23 24 3.989817 GCCATAACTTTCAAAACAGGCTG 59.010 43.478 14.16 14.16 36.72 4.85
24 25 4.261994 GCCATAACTTTCAAAACAGGCTGA 60.262 41.667 23.66 0.00 36.72 4.26
25 26 5.738783 GCCATAACTTTCAAAACAGGCTGAA 60.739 40.000 23.66 1.08 36.72 3.02
26 27 6.279882 CCATAACTTTCAAAACAGGCTGAAA 58.720 36.000 23.66 10.00 38.81 2.69
27 28 6.930722 CCATAACTTTCAAAACAGGCTGAAAT 59.069 34.615 23.66 3.79 39.97 2.17
28 29 7.442062 CCATAACTTTCAAAACAGGCTGAAATT 59.558 33.333 23.66 10.17 39.97 1.82
29 30 8.829612 CATAACTTTCAAAACAGGCTGAAATTT 58.170 29.630 23.66 15.47 39.97 1.82
30 31 7.686438 AACTTTCAAAACAGGCTGAAATTTT 57.314 28.000 23.66 14.51 39.97 1.82
31 32 7.686438 ACTTTCAAAACAGGCTGAAATTTTT 57.314 28.000 23.66 14.14 39.97 1.94
32 33 7.529158 ACTTTCAAAACAGGCTGAAATTTTTG 58.471 30.769 23.66 23.98 39.97 2.44
33 34 7.390162 ACTTTCAAAACAGGCTGAAATTTTTGA 59.610 29.630 26.70 26.70 41.87 2.69
34 35 7.678947 TTCAAAACAGGCTGAAATTTTTGAA 57.321 28.000 31.51 31.51 46.32 2.69
35 36 7.306205 TCAAAACAGGCTGAAATTTTTGAAG 57.694 32.000 27.57 12.62 41.09 3.02
36 37 5.739752 AAACAGGCTGAAATTTTTGAAGC 57.260 34.783 23.66 0.15 0.00 3.86
37 38 3.383761 ACAGGCTGAAATTTTTGAAGCG 58.616 40.909 23.66 0.00 34.66 4.68
38 39 3.068024 ACAGGCTGAAATTTTTGAAGCGA 59.932 39.130 23.66 0.00 34.66 4.93
39 40 4.050553 CAGGCTGAAATTTTTGAAGCGAA 58.949 39.130 9.42 0.00 34.66 4.70
40 41 4.507388 CAGGCTGAAATTTTTGAAGCGAAA 59.493 37.500 9.42 0.00 34.66 3.46
41 42 4.746611 AGGCTGAAATTTTTGAAGCGAAAG 59.253 37.500 0.00 0.00 34.66 2.62
42 43 4.084380 GGCTGAAATTTTTGAAGCGAAAGG 60.084 41.667 0.00 0.00 34.66 3.11
43 44 4.084380 GCTGAAATTTTTGAAGCGAAAGGG 60.084 41.667 0.00 0.00 0.00 3.95
44 45 5.269505 TGAAATTTTTGAAGCGAAAGGGA 57.730 34.783 0.00 0.00 0.00 4.20
45 46 5.047188 TGAAATTTTTGAAGCGAAAGGGAC 58.953 37.500 0.00 0.00 0.00 4.46
46 47 4.664150 AATTTTTGAAGCGAAAGGGACA 57.336 36.364 0.00 0.00 0.00 4.02
47 48 4.871933 ATTTTTGAAGCGAAAGGGACAT 57.128 36.364 0.00 0.00 0.00 3.06
48 49 5.975693 ATTTTTGAAGCGAAAGGGACATA 57.024 34.783 0.00 0.00 0.00 2.29
49 50 5.975693 TTTTTGAAGCGAAAGGGACATAT 57.024 34.783 0.00 0.00 0.00 1.78
50 51 5.975693 TTTTGAAGCGAAAGGGACATATT 57.024 34.783 0.00 0.00 0.00 1.28
51 52 5.560966 TTTGAAGCGAAAGGGACATATTC 57.439 39.130 0.00 0.00 0.00 1.75
52 53 3.541632 TGAAGCGAAAGGGACATATTCC 58.458 45.455 0.00 0.00 45.00 3.01
59 60 3.246687 GGACATATTCCGGGCCCA 58.753 61.111 24.92 1.51 33.46 5.36
60 61 1.073199 GGACATATTCCGGGCCCAG 59.927 63.158 24.92 11.71 33.46 4.45
61 62 1.600916 GACATATTCCGGGCCCAGC 60.601 63.158 24.92 0.00 0.00 4.85
80 81 1.512926 CCGAGATGGCCGAAATTAGG 58.487 55.000 0.00 0.00 0.00 2.69
91 92 4.568152 CCGAAATTAGGCCGAAATTGAT 57.432 40.909 16.81 5.49 0.00 2.57
92 93 4.932146 CCGAAATTAGGCCGAAATTGATT 58.068 39.130 16.81 4.89 0.00 2.57
93 94 5.348164 CCGAAATTAGGCCGAAATTGATTT 58.652 37.500 16.81 6.81 0.00 2.17
94 95 5.810074 CCGAAATTAGGCCGAAATTGATTTT 59.190 36.000 16.81 6.18 0.00 1.82
95 96 6.312672 CCGAAATTAGGCCGAAATTGATTTTT 59.687 34.615 16.81 5.54 0.00 1.94
113 114 3.454371 TTTTCCGGCCGAAAATCAAAA 57.546 38.095 30.73 17.02 43.89 2.44
114 115 2.425578 TTCCGGCCGAAAATCAAAAC 57.574 45.000 30.73 0.00 0.00 2.43
115 116 1.611519 TCCGGCCGAAAATCAAAACT 58.388 45.000 30.73 0.00 0.00 2.66
116 117 1.268352 TCCGGCCGAAAATCAAAACTG 59.732 47.619 30.73 4.53 0.00 3.16
117 118 1.000717 CCGGCCGAAAATCAAAACTGT 60.001 47.619 30.73 0.00 0.00 3.55
118 119 2.050691 CGGCCGAAAATCAAAACTGTG 58.949 47.619 24.07 0.00 0.00 3.66
136 137 0.105964 TGGTACAGACACAAGCGCTT 59.894 50.000 18.98 18.98 0.00 4.68
145 146 4.803613 CAGACACAAGCGCTTATATACACA 59.196 41.667 24.55 0.00 0.00 3.72
158 159 7.410835 CGCTTATATACACATGCATACACTCAC 60.411 40.741 0.00 0.00 0.00 3.51
161 162 1.630369 ACACATGCATACACTCACCCT 59.370 47.619 0.00 0.00 0.00 4.34
190 191 2.028484 ACACGCACACCCTACACG 59.972 61.111 0.00 0.00 0.00 4.49
218 219 2.035961 CACCTCCGAAAGACTGAACTGA 59.964 50.000 0.00 0.00 0.00 3.41
219 220 2.900546 ACCTCCGAAAGACTGAACTGAT 59.099 45.455 0.00 0.00 0.00 2.90
286 287 4.097361 GGAACGCCTCCTCCCACC 62.097 72.222 0.00 0.00 41.61 4.61
287 288 3.319198 GAACGCCTCCTCCCACCA 61.319 66.667 0.00 0.00 0.00 4.17
291 292 1.228429 CGCCTCCTCCCACCAAAAA 60.228 57.895 0.00 0.00 0.00 1.94
297 298 0.678950 CCTCCCACCAAAAACGCATT 59.321 50.000 0.00 0.00 0.00 3.56
299 300 1.068434 CTCCCACCAAAAACGCATTGT 59.932 47.619 0.00 0.00 0.00 2.71
319 320 8.872845 GCATTGTCGAAAATCCTGAAATAAATT 58.127 29.630 0.00 0.00 0.00 1.82
1158 1189 9.343103 GATTGCGTAGATTAGAATATTTCGAGA 57.657 33.333 0.00 0.00 34.02 4.04
1281 1325 5.104941 TCAAAGGTGATCAATCGTGGACTAT 60.105 40.000 0.00 0.00 0.00 2.12
1619 3719 2.504367 CAACCAAGTCCATTTCCGAGT 58.496 47.619 0.00 0.00 0.00 4.18
1667 3770 7.592938 AGTTAACCATGTGTGTTGTTGATATG 58.407 34.615 0.88 0.00 0.00 1.78
1671 3774 5.181811 ACCATGTGTGTTGTTGATATGTCTG 59.818 40.000 0.00 0.00 0.00 3.51
1694 3797 1.004277 TGTTTGGGCAGATGGAGTACC 59.996 52.381 0.00 0.00 0.00 3.34
1812 3918 5.451937 CGTTAAGACAGATAGCATCTTCCCA 60.452 44.000 1.24 0.00 37.58 4.37
1992 4099 9.084533 AGATAGATTTACTGAGATCTTACCCAC 57.915 37.037 0.00 0.00 34.60 4.61
2136 4251 8.970691 AAATTTATGCCGATATTGATACTTGC 57.029 30.769 0.00 0.00 0.00 4.01
3005 5338 3.244735 TGACCATGAGAAATTTCCACCGA 60.245 43.478 14.61 0.00 0.00 4.69
3084 9767 1.918800 CACCCGACCCTTCCTCCTT 60.919 63.158 0.00 0.00 0.00 3.36
3140 9824 7.451731 TCTTCATGGGGTTATCACTAGAATT 57.548 36.000 0.00 0.00 0.00 2.17
3144 9828 7.638444 TCATGGGGTTATCACTAGAATTCAAA 58.362 34.615 8.44 0.00 0.00 2.69
3217 9997 3.810623 TCCTTGGTGGTAAAGGATACCT 58.189 45.455 0.75 0.00 46.56 3.08
3314 10095 4.189231 GTCAGGGTATATGGTGTGTTCAC 58.811 47.826 0.00 0.00 43.19 3.18
3315 10096 3.118920 TCAGGGTATATGGTGTGTTCACG 60.119 47.826 0.00 0.00 44.68 4.35
3316 10097 1.937899 GGGTATATGGTGTGTTCACGC 59.062 52.381 7.82 7.82 44.68 5.34
3317 10098 2.623535 GGTATATGGTGTGTTCACGCA 58.376 47.619 16.44 1.78 44.68 5.24
3567 14694 1.411977 AGGACATGATGCTCTCCTTCG 59.588 52.381 0.00 0.00 27.83 3.79
3667 14927 5.021033 TGGTTTTTGGGCAATAGCATATG 57.979 39.130 0.00 0.00 44.61 1.78
3671 14931 4.916983 TTTGGGCAATAGCATATGTGTC 57.083 40.909 4.29 0.00 44.61 3.67
3672 14932 3.574354 TGGGCAATAGCATATGTGTCA 57.426 42.857 4.29 0.00 44.61 3.58
3673 14933 4.103013 TGGGCAATAGCATATGTGTCAT 57.897 40.909 4.29 0.00 44.61 3.06
3674 14934 4.472496 TGGGCAATAGCATATGTGTCATT 58.528 39.130 4.29 0.00 44.61 2.57
3675 14935 4.520111 TGGGCAATAGCATATGTGTCATTC 59.480 41.667 4.29 0.00 44.61 2.67
3677 14937 5.242393 GGGCAATAGCATATGTGTCATTCTT 59.758 40.000 4.29 0.00 44.61 2.52
3699 14959 2.908688 TTTTTGAGAAAAGGCCCAGC 57.091 45.000 0.00 0.00 31.41 4.85
3712 14972 3.790089 GGCCCAGCCTACAGTTATATT 57.210 47.619 0.00 0.00 46.69 1.28
3713 14973 4.903045 GGCCCAGCCTACAGTTATATTA 57.097 45.455 0.00 0.00 46.69 0.98
3714 14974 4.576879 GGCCCAGCCTACAGTTATATTAC 58.423 47.826 0.00 0.00 46.69 1.89
3715 14975 4.565028 GGCCCAGCCTACAGTTATATTACC 60.565 50.000 0.00 0.00 46.69 2.85
3716 14976 4.041198 GCCCAGCCTACAGTTATATTACCA 59.959 45.833 0.00 0.00 0.00 3.25
3717 14977 5.548406 CCCAGCCTACAGTTATATTACCAC 58.452 45.833 0.00 0.00 0.00 4.16
3718 14978 5.307196 CCCAGCCTACAGTTATATTACCACT 59.693 44.000 0.00 0.00 0.00 4.00
3719 14979 6.223852 CCAGCCTACAGTTATATTACCACTG 58.776 44.000 0.85 0.85 43.12 3.66
3720 14980 6.041637 CCAGCCTACAGTTATATTACCACTGA 59.958 42.308 8.21 0.00 40.43 3.41
3721 14981 7.148641 CAGCCTACAGTTATATTACCACTGAG 58.851 42.308 8.21 2.77 40.43 3.35
3722 14982 6.267928 AGCCTACAGTTATATTACCACTGAGG 59.732 42.308 8.21 10.28 40.43 3.86
3723 14983 6.267014 GCCTACAGTTATATTACCACTGAGGA 59.733 42.308 16.26 2.38 40.43 3.71
3724 14984 7.524038 GCCTACAGTTATATTACCACTGAGGAG 60.524 44.444 16.26 8.58 40.43 3.69
3725 14985 7.724506 CCTACAGTTATATTACCACTGAGGAGA 59.275 40.741 8.21 0.00 40.43 3.71
3726 14986 9.303116 CTACAGTTATATTACCACTGAGGAGAT 57.697 37.037 8.21 0.00 40.43 2.75
3728 14988 9.656323 ACAGTTATATTACCACTGAGGAGATAA 57.344 33.333 8.21 0.00 40.43 1.75
3736 14996 6.426646 ACCACTGAGGAGATAATACAATCC 57.573 41.667 0.00 0.00 41.22 3.01
3737 14997 6.146760 ACCACTGAGGAGATAATACAATCCT 58.853 40.000 0.00 0.00 44.90 3.24
3744 15004 7.493499 AGGAGATAATACAATCCTCCATGAG 57.507 40.000 0.00 0.00 37.66 2.90
3757 15017 3.214694 TCCATGAGGAGGGGTTTAAGA 57.785 47.619 0.00 0.00 39.61 2.10
3758 15018 3.115390 TCCATGAGGAGGGGTTTAAGAG 58.885 50.000 0.00 0.00 39.61 2.85
3759 15019 2.846827 CCATGAGGAGGGGTTTAAGAGT 59.153 50.000 0.00 0.00 36.89 3.24
3760 15020 3.370953 CCATGAGGAGGGGTTTAAGAGTG 60.371 52.174 0.00 0.00 36.89 3.51
3761 15021 3.269592 TGAGGAGGGGTTTAAGAGTGA 57.730 47.619 0.00 0.00 0.00 3.41
3762 15022 3.173965 TGAGGAGGGGTTTAAGAGTGAG 58.826 50.000 0.00 0.00 0.00 3.51
3763 15023 2.502130 GAGGAGGGGTTTAAGAGTGAGG 59.498 54.545 0.00 0.00 0.00 3.86
3764 15024 1.560146 GGAGGGGTTTAAGAGTGAGGG 59.440 57.143 0.00 0.00 0.00 4.30
3765 15025 1.560146 GAGGGGTTTAAGAGTGAGGGG 59.440 57.143 0.00 0.00 0.00 4.79
3766 15026 0.624254 GGGGTTTAAGAGTGAGGGGG 59.376 60.000 0.00 0.00 0.00 5.40
3767 15027 1.665137 GGGTTTAAGAGTGAGGGGGA 58.335 55.000 0.00 0.00 0.00 4.81
3768 15028 1.281287 GGGTTTAAGAGTGAGGGGGAC 59.719 57.143 0.00 0.00 0.00 4.46
3769 15029 1.982958 GGTTTAAGAGTGAGGGGGACA 59.017 52.381 0.00 0.00 0.00 4.02
3770 15030 2.576648 GGTTTAAGAGTGAGGGGGACAT 59.423 50.000 0.00 0.00 0.00 3.06
3771 15031 3.370633 GGTTTAAGAGTGAGGGGGACATC 60.371 52.174 0.00 0.00 42.74 3.06
3772 15032 3.491766 TTAAGAGTGAGGGGGACATCT 57.508 47.619 0.00 0.00 42.90 2.90
3773 15033 1.872773 AAGAGTGAGGGGGACATCTC 58.127 55.000 0.00 0.00 42.90 2.75
3774 15034 0.031616 AGAGTGAGGGGGACATCTCC 60.032 60.000 0.00 0.00 42.90 3.71
3775 15035 0.031616 GAGTGAGGGGGACATCTCCT 60.032 60.000 0.00 0.00 42.90 3.69
3776 15036 1.218196 GAGTGAGGGGGACATCTCCTA 59.782 57.143 0.00 0.00 42.90 2.94
3777 15037 1.869648 AGTGAGGGGGACATCTCCTAT 59.130 52.381 0.00 0.00 42.90 2.57
3778 15038 3.072086 AGTGAGGGGGACATCTCCTATA 58.928 50.000 0.00 0.00 42.90 1.31
3779 15039 3.166679 GTGAGGGGGACATCTCCTATAC 58.833 54.545 0.00 0.00 42.90 1.47
3780 15040 2.795360 TGAGGGGGACATCTCCTATACA 59.205 50.000 0.00 0.00 42.90 2.29
3781 15041 3.406152 TGAGGGGGACATCTCCTATACAT 59.594 47.826 0.00 0.00 42.90 2.29
3782 15042 4.140447 TGAGGGGGACATCTCCTATACATT 60.140 45.833 0.00 0.00 42.90 2.71
3783 15043 4.844348 AGGGGGACATCTCCTATACATTT 58.156 43.478 0.00 0.00 36.68 2.32
3784 15044 5.989717 AGGGGGACATCTCCTATACATTTA 58.010 41.667 0.00 0.00 36.68 1.40
3785 15045 6.584950 AGGGGGACATCTCCTATACATTTAT 58.415 40.000 0.00 0.00 36.68 1.40
3786 15046 7.729350 AGGGGGACATCTCCTATACATTTATA 58.271 38.462 0.00 0.00 36.68 0.98
3787 15047 8.191110 AGGGGGACATCTCCTATACATTTATAA 58.809 37.037 0.00 0.00 36.68 0.98
3788 15048 9.004231 GGGGGACATCTCCTATACATTTATAAT 57.996 37.037 0.00 0.00 36.68 1.28
3810 15070 5.207110 TCTCCATGTATTCTAGCAAGAGC 57.793 43.478 0.00 0.00 42.56 4.09
3826 15086 3.437795 GCGGCAAGCTCATGTGCT 61.438 61.111 16.33 16.33 46.40 4.40
3827 15087 2.108514 GCGGCAAGCTCATGTGCTA 61.109 57.895 21.70 0.00 43.24 3.49
3828 15088 2.012237 CGGCAAGCTCATGTGCTAG 58.988 57.895 21.70 10.49 43.24 3.42
3829 15089 1.434622 CGGCAAGCTCATGTGCTAGG 61.435 60.000 21.70 17.23 43.24 3.02
3830 15090 0.393537 GGCAAGCTCATGTGCTAGGT 60.394 55.000 21.70 4.71 43.24 3.08
3831 15091 1.457346 GCAAGCTCATGTGCTAGGTT 58.543 50.000 21.70 6.72 43.24 3.50
3833 15093 2.430465 CAAGCTCATGTGCTAGGTTGT 58.570 47.619 21.70 3.24 43.08 3.32
3834 15094 2.816087 CAAGCTCATGTGCTAGGTTGTT 59.184 45.455 21.70 2.51 43.08 2.83
3835 15095 2.430465 AGCTCATGTGCTAGGTTGTTG 58.570 47.619 20.22 0.00 42.10 3.33
3836 15096 1.135575 GCTCATGTGCTAGGTTGTTGC 60.136 52.381 12.42 0.00 0.00 4.17
3837 15097 2.430465 CTCATGTGCTAGGTTGTTGCT 58.570 47.619 0.00 0.00 0.00 3.91
3838 15098 2.153645 TCATGTGCTAGGTTGTTGCTG 58.846 47.619 0.00 0.00 0.00 4.41
3839 15099 1.200716 CATGTGCTAGGTTGTTGCTGG 59.799 52.381 0.00 0.00 0.00 4.85
3840 15100 0.472044 TGTGCTAGGTTGTTGCTGGA 59.528 50.000 0.00 0.00 0.00 3.86
3841 15101 1.073763 TGTGCTAGGTTGTTGCTGGAT 59.926 47.619 0.00 0.00 0.00 3.41
3842 15102 1.740025 GTGCTAGGTTGTTGCTGGATC 59.260 52.381 0.00 0.00 0.00 3.36
3843 15103 1.630369 TGCTAGGTTGTTGCTGGATCT 59.370 47.619 0.00 0.00 0.00 2.75
3844 15104 2.040278 TGCTAGGTTGTTGCTGGATCTT 59.960 45.455 0.00 0.00 0.00 2.40
3845 15105 2.680339 GCTAGGTTGTTGCTGGATCTTC 59.320 50.000 0.00 0.00 0.00 2.87
3846 15106 3.620966 GCTAGGTTGTTGCTGGATCTTCT 60.621 47.826 0.00 0.00 0.00 2.85
3847 15107 3.064900 AGGTTGTTGCTGGATCTTCTC 57.935 47.619 0.00 0.00 0.00 2.87
3848 15108 2.373169 AGGTTGTTGCTGGATCTTCTCA 59.627 45.455 0.00 0.00 0.00 3.27
3849 15109 2.485814 GGTTGTTGCTGGATCTTCTCAC 59.514 50.000 0.00 0.00 0.00 3.51
3850 15110 2.084610 TGTTGCTGGATCTTCTCACG 57.915 50.000 0.00 0.00 0.00 4.35
3851 15111 1.338105 TGTTGCTGGATCTTCTCACGG 60.338 52.381 0.00 0.00 0.00 4.94
3852 15112 0.391661 TTGCTGGATCTTCTCACGGC 60.392 55.000 0.00 0.00 0.00 5.68
3853 15113 1.522580 GCTGGATCTTCTCACGGCC 60.523 63.158 0.00 0.00 0.00 6.13
3854 15114 1.965754 GCTGGATCTTCTCACGGCCT 61.966 60.000 0.00 0.00 0.00 5.19
3855 15115 0.539051 CTGGATCTTCTCACGGCCTT 59.461 55.000 0.00 0.00 0.00 4.35
3856 15116 0.250234 TGGATCTTCTCACGGCCTTG 59.750 55.000 1.99 1.99 0.00 3.61
3857 15117 0.537188 GGATCTTCTCACGGCCTTGA 59.463 55.000 11.99 11.99 0.00 3.02
3858 15118 1.139853 GGATCTTCTCACGGCCTTGAT 59.860 52.381 13.03 0.00 0.00 2.57
3859 15119 2.208431 GATCTTCTCACGGCCTTGATG 58.792 52.381 13.03 7.30 0.00 3.07
3860 15120 0.250234 TCTTCTCACGGCCTTGATGG 59.750 55.000 13.03 2.10 39.35 3.51
3861 15121 0.036010 CTTCTCACGGCCTTGATGGT 60.036 55.000 13.03 0.00 38.35 3.55
3862 15122 0.321564 TTCTCACGGCCTTGATGGTG 60.322 55.000 13.03 6.11 38.35 4.17
3863 15123 1.191489 TCTCACGGCCTTGATGGTGA 61.191 55.000 13.03 10.37 37.77 4.02
3864 15124 1.003839 TCACGGCCTTGATGGTGAC 60.004 57.895 8.06 0.00 34.71 3.67
3865 15125 1.003355 CACGGCCTTGATGGTGACT 60.003 57.895 2.29 0.00 38.35 3.41
3866 15126 0.606401 CACGGCCTTGATGGTGACTT 60.606 55.000 2.29 0.00 38.35 3.01
3867 15127 0.321653 ACGGCCTTGATGGTGACTTC 60.322 55.000 0.00 0.00 38.35 3.01
3868 15128 0.321564 CGGCCTTGATGGTGACTTCA 60.322 55.000 0.00 0.00 42.19 3.02
3869 15129 1.168714 GGCCTTGATGGTGACTTCAC 58.831 55.000 0.00 0.34 43.41 3.18
3870 15130 1.271597 GGCCTTGATGGTGACTTCACT 60.272 52.381 9.20 0.00 43.41 3.41
3871 15131 1.808945 GCCTTGATGGTGACTTCACTG 59.191 52.381 9.20 0.00 43.41 3.66
3872 15132 2.550855 GCCTTGATGGTGACTTCACTGA 60.551 50.000 9.20 0.00 43.41 3.41
3873 15133 3.743521 CCTTGATGGTGACTTCACTGAA 58.256 45.455 9.20 0.00 43.41 3.02
3874 15134 3.499918 CCTTGATGGTGACTTCACTGAAC 59.500 47.826 9.20 0.80 43.41 3.18
3875 15135 3.836365 TGATGGTGACTTCACTGAACA 57.164 42.857 9.20 0.00 45.73 3.18
3876 15136 4.356405 TGATGGTGACTTCACTGAACAT 57.644 40.909 9.20 4.29 45.73 2.71
3877 15137 4.717877 TGATGGTGACTTCACTGAACATT 58.282 39.130 9.20 0.00 45.73 2.71
3878 15138 5.132502 TGATGGTGACTTCACTGAACATTT 58.867 37.500 9.20 0.00 45.73 2.32
3879 15139 5.593909 TGATGGTGACTTCACTGAACATTTT 59.406 36.000 9.20 0.00 45.73 1.82
3880 15140 5.499139 TGGTGACTTCACTGAACATTTTC 57.501 39.130 9.20 0.00 45.73 2.29
3881 15141 4.946772 TGGTGACTTCACTGAACATTTTCA 59.053 37.500 9.20 0.00 45.73 2.69
3882 15142 5.593909 TGGTGACTTCACTGAACATTTTCAT 59.406 36.000 9.20 0.00 45.73 2.57
3883 15143 5.916883 GGTGACTTCACTGAACATTTTCATG 59.083 40.000 9.20 0.00 45.73 3.07
3884 15144 6.238731 GGTGACTTCACTGAACATTTTCATGA 60.239 38.462 9.20 0.00 45.73 3.07
3885 15145 6.854892 GTGACTTCACTGAACATTTTCATGAG 59.145 38.462 1.92 0.00 41.05 2.90
3886 15146 6.016860 TGACTTCACTGAACATTTTCATGAGG 60.017 38.462 0.00 5.11 41.05 3.86
3887 15147 5.829924 ACTTCACTGAACATTTTCATGAGGT 59.170 36.000 12.01 12.01 41.05 3.85
3888 15148 5.947228 TCACTGAACATTTTCATGAGGTC 57.053 39.130 0.00 0.00 41.05 3.85
3889 15149 4.761739 TCACTGAACATTTTCATGAGGTCC 59.238 41.667 0.00 0.00 41.05 4.46
3890 15150 4.082125 ACTGAACATTTTCATGAGGTCCC 58.918 43.478 0.00 0.00 41.05 4.46
3891 15151 4.202609 ACTGAACATTTTCATGAGGTCCCT 60.203 41.667 0.00 0.00 41.05 4.20
3892 15152 5.014123 ACTGAACATTTTCATGAGGTCCCTA 59.986 40.000 0.00 0.00 41.05 3.53
3893 15153 5.253330 TGAACATTTTCATGAGGTCCCTAC 58.747 41.667 0.00 0.00 36.79 3.18
3894 15154 5.014123 TGAACATTTTCATGAGGTCCCTACT 59.986 40.000 0.00 0.00 36.79 2.57
3895 15155 4.848357 ACATTTTCATGAGGTCCCTACTG 58.152 43.478 0.00 0.00 34.11 2.74
3896 15156 4.289672 ACATTTTCATGAGGTCCCTACTGT 59.710 41.667 0.00 0.00 34.11 3.55
3897 15157 4.553330 TTTTCATGAGGTCCCTACTGTC 57.447 45.455 0.00 0.00 0.00 3.51
3898 15158 2.160721 TCATGAGGTCCCTACTGTCC 57.839 55.000 0.00 0.00 0.00 4.02
3899 15159 0.747255 CATGAGGTCCCTACTGTCCG 59.253 60.000 0.00 0.00 0.00 4.79
3900 15160 0.335361 ATGAGGTCCCTACTGTCCGT 59.665 55.000 0.00 0.00 0.00 4.69
3901 15161 0.611062 TGAGGTCCCTACTGTCCGTG 60.611 60.000 0.00 0.00 0.00 4.94
3902 15162 0.323178 GAGGTCCCTACTGTCCGTGA 60.323 60.000 0.00 0.00 0.00 4.35
3903 15163 0.611340 AGGTCCCTACTGTCCGTGAC 60.611 60.000 0.00 0.00 0.00 3.67
3904 15164 0.896940 GGTCCCTACTGTCCGTGACA 60.897 60.000 6.57 6.57 40.50 3.58
3905 15165 0.963962 GTCCCTACTGTCCGTGACAA 59.036 55.000 7.90 0.00 42.26 3.18
3906 15166 1.067776 GTCCCTACTGTCCGTGACAAG 60.068 57.143 7.90 4.24 42.26 3.16
3907 15167 0.246635 CCCTACTGTCCGTGACAAGG 59.753 60.000 13.60 13.60 42.26 3.61
3908 15168 0.246635 CCTACTGTCCGTGACAAGGG 59.753 60.000 7.62 0.00 42.26 3.95
3909 15169 0.246635 CTACTGTCCGTGACAAGGGG 59.753 60.000 7.62 1.71 42.26 4.79
3910 15170 1.189524 TACTGTCCGTGACAAGGGGG 61.190 60.000 7.62 1.38 42.26 5.40
3911 15171 2.122769 TGTCCGTGACAAGGGGGA 60.123 61.111 7.62 0.00 39.78 4.81
3912 15172 1.764571 CTGTCCGTGACAAGGGGGAA 61.765 60.000 7.62 0.00 42.26 3.97
3913 15173 1.346479 TGTCCGTGACAAGGGGGAAA 61.346 55.000 7.62 0.00 39.78 3.13
3914 15174 0.179012 GTCCGTGACAAGGGGGAAAA 60.179 55.000 7.62 0.00 32.09 2.29
3915 15175 0.109723 TCCGTGACAAGGGGGAAAAG 59.890 55.000 7.62 0.00 31.87 2.27
3916 15176 0.893727 CCGTGACAAGGGGGAAAAGG 60.894 60.000 0.00 0.00 0.00 3.11
3917 15177 0.893727 CGTGACAAGGGGGAAAAGGG 60.894 60.000 0.00 0.00 0.00 3.95
3918 15178 1.155155 TGACAAGGGGGAAAAGGGC 59.845 57.895 0.00 0.00 0.00 5.19
3919 15179 1.155155 GACAAGGGGGAAAAGGGCA 59.845 57.895 0.00 0.00 0.00 5.36
3920 15180 0.900182 GACAAGGGGGAAAAGGGCAG 60.900 60.000 0.00 0.00 0.00 4.85
3921 15181 1.368268 ACAAGGGGGAAAAGGGCAGA 61.368 55.000 0.00 0.00 0.00 4.26
3922 15182 0.041684 CAAGGGGGAAAAGGGCAGAT 59.958 55.000 0.00 0.00 0.00 2.90
3923 15183 0.792960 AAGGGGGAAAAGGGCAGATT 59.207 50.000 0.00 0.00 0.00 2.40
3924 15184 0.041684 AGGGGGAAAAGGGCAGATTG 59.958 55.000 0.00 0.00 0.00 2.67
3925 15185 0.041090 GGGGGAAAAGGGCAGATTGA 59.959 55.000 0.00 0.00 0.00 2.57
3926 15186 1.343377 GGGGGAAAAGGGCAGATTGAT 60.343 52.381 0.00 0.00 0.00 2.57
3927 15187 2.470990 GGGGAAAAGGGCAGATTGATT 58.529 47.619 0.00 0.00 0.00 2.57
3928 15188 2.169144 GGGGAAAAGGGCAGATTGATTG 59.831 50.000 0.00 0.00 0.00 2.67
3929 15189 2.833943 GGGAAAAGGGCAGATTGATTGT 59.166 45.455 0.00 0.00 0.00 2.71
3930 15190 3.368739 GGGAAAAGGGCAGATTGATTGTG 60.369 47.826 0.00 0.00 0.00 3.33
3931 15191 3.259123 GGAAAAGGGCAGATTGATTGTGT 59.741 43.478 0.00 0.00 0.00 3.72
3932 15192 4.462483 GGAAAAGGGCAGATTGATTGTGTA 59.538 41.667 0.00 0.00 0.00 2.90
3933 15193 5.047377 GGAAAAGGGCAGATTGATTGTGTAA 60.047 40.000 0.00 0.00 0.00 2.41
3934 15194 6.351286 GGAAAAGGGCAGATTGATTGTGTAAT 60.351 38.462 0.00 0.00 0.00 1.89
3935 15195 6.610075 AAAGGGCAGATTGATTGTGTAATT 57.390 33.333 0.00 0.00 0.00 1.40
3936 15196 6.610075 AAGGGCAGATTGATTGTGTAATTT 57.390 33.333 0.00 0.00 0.00 1.82
3937 15197 5.969423 AGGGCAGATTGATTGTGTAATTTG 58.031 37.500 0.00 0.00 0.00 2.32
3938 15198 5.716228 AGGGCAGATTGATTGTGTAATTTGA 59.284 36.000 0.00 0.00 0.00 2.69
3939 15199 6.211184 AGGGCAGATTGATTGTGTAATTTGAA 59.789 34.615 0.00 0.00 0.00 2.69
3940 15200 6.532657 GGGCAGATTGATTGTGTAATTTGAAG 59.467 38.462 0.00 0.00 0.00 3.02
3941 15201 7.092716 GGCAGATTGATTGTGTAATTTGAAGT 58.907 34.615 0.00 0.00 0.00 3.01
3942 15202 7.274250 GGCAGATTGATTGTGTAATTTGAAGTC 59.726 37.037 0.00 0.00 0.00 3.01
3943 15203 7.274250 GCAGATTGATTGTGTAATTTGAAGTCC 59.726 37.037 0.00 0.00 0.00 3.85
3944 15204 8.298854 CAGATTGATTGTGTAATTTGAAGTCCA 58.701 33.333 0.00 0.00 0.00 4.02
3945 15205 8.517878 AGATTGATTGTGTAATTTGAAGTCCAG 58.482 33.333 0.00 0.00 0.00 3.86
3946 15206 7.581213 TTGATTGTGTAATTTGAAGTCCAGT 57.419 32.000 0.00 0.00 0.00 4.00
3947 15207 8.684386 TTGATTGTGTAATTTGAAGTCCAGTA 57.316 30.769 0.00 0.00 0.00 2.74
3948 15208 8.322906 TGATTGTGTAATTTGAAGTCCAGTAG 57.677 34.615 0.00 0.00 0.00 2.57
3949 15209 6.554334 TTGTGTAATTTGAAGTCCAGTAGC 57.446 37.500 0.00 0.00 0.00 3.58
3950 15210 4.688879 TGTGTAATTTGAAGTCCAGTAGCG 59.311 41.667 0.00 0.00 0.00 4.26
3951 15211 3.682858 TGTAATTTGAAGTCCAGTAGCGC 59.317 43.478 0.00 0.00 0.00 5.92
3952 15212 2.770164 ATTTGAAGTCCAGTAGCGCT 57.230 45.000 17.26 17.26 0.00 5.92
3953 15213 1.795768 TTTGAAGTCCAGTAGCGCTG 58.204 50.000 22.90 3.69 44.63 5.18
3961 15221 3.694364 CAGTAGCGCTGGAATGGAT 57.306 52.632 22.90 0.00 41.42 3.41
3962 15222 1.224075 CAGTAGCGCTGGAATGGATG 58.776 55.000 22.90 2.98 41.42 3.51
3963 15223 0.533755 AGTAGCGCTGGAATGGATGC 60.534 55.000 22.90 0.00 0.00 3.91
3964 15224 0.815213 GTAGCGCTGGAATGGATGCA 60.815 55.000 22.90 0.00 0.00 3.96
3965 15225 0.815213 TAGCGCTGGAATGGATGCAC 60.815 55.000 22.90 0.00 0.00 4.57
3966 15226 2.409055 GCGCTGGAATGGATGCACA 61.409 57.895 0.00 0.00 0.00 4.57
3967 15227 1.725665 CGCTGGAATGGATGCACAG 59.274 57.895 0.00 0.00 0.00 3.66
3968 15228 1.028330 CGCTGGAATGGATGCACAGT 61.028 55.000 5.44 0.00 0.00 3.55
3969 15229 0.737219 GCTGGAATGGATGCACAGTC 59.263 55.000 5.44 0.00 34.91 3.51
3970 15230 1.681166 GCTGGAATGGATGCACAGTCT 60.681 52.381 4.99 0.00 35.89 3.24
3971 15231 2.014857 CTGGAATGGATGCACAGTCTG 58.985 52.381 0.00 0.00 35.89 3.51
3972 15232 1.352017 TGGAATGGATGCACAGTCTGT 59.648 47.619 0.00 0.00 35.89 3.41
3973 15233 2.224843 TGGAATGGATGCACAGTCTGTT 60.225 45.455 1.67 0.00 35.89 3.16
3974 15234 2.821969 GGAATGGATGCACAGTCTGTTT 59.178 45.455 1.67 0.00 35.89 2.83
3975 15235 3.119708 GGAATGGATGCACAGTCTGTTTC 60.120 47.826 1.67 2.91 35.89 2.78
3976 15236 1.896220 TGGATGCACAGTCTGTTTCC 58.104 50.000 15.16 15.16 0.00 3.13
3977 15237 1.142667 TGGATGCACAGTCTGTTTCCA 59.857 47.619 18.68 18.68 32.29 3.53
3978 15238 1.537202 GGATGCACAGTCTGTTTCCAC 59.463 52.381 16.39 4.34 0.00 4.02
3979 15239 2.221169 GATGCACAGTCTGTTTCCACA 58.779 47.619 1.67 0.00 0.00 4.17
3980 15240 1.378531 TGCACAGTCTGTTTCCACAC 58.621 50.000 1.67 0.00 0.00 3.82
3981 15241 1.339535 TGCACAGTCTGTTTCCACACA 60.340 47.619 1.67 0.00 0.00 3.72
3982 15242 1.949525 GCACAGTCTGTTTCCACACAT 59.050 47.619 1.67 0.00 0.00 3.21
3983 15243 3.138304 GCACAGTCTGTTTCCACACATA 58.862 45.455 1.67 0.00 0.00 2.29
3984 15244 3.187227 GCACAGTCTGTTTCCACACATAG 59.813 47.826 1.67 0.00 0.00 2.23
3985 15245 4.631131 CACAGTCTGTTTCCACACATAGA 58.369 43.478 1.67 0.00 0.00 1.98
3986 15246 4.687948 CACAGTCTGTTTCCACACATAGAG 59.312 45.833 1.67 0.00 0.00 2.43
3987 15247 4.248859 CAGTCTGTTTCCACACATAGAGG 58.751 47.826 0.00 0.00 0.00 3.69
3988 15248 3.904339 AGTCTGTTTCCACACATAGAGGT 59.096 43.478 0.00 0.00 0.00 3.85
3989 15249 4.021016 AGTCTGTTTCCACACATAGAGGTC 60.021 45.833 0.00 0.00 0.00 3.85
3990 15250 4.021016 GTCTGTTTCCACACATAGAGGTCT 60.021 45.833 0.00 0.00 0.00 3.85
3991 15251 4.021104 TCTGTTTCCACACATAGAGGTCTG 60.021 45.833 0.00 0.00 0.00 3.51
3992 15252 3.901222 TGTTTCCACACATAGAGGTCTGA 59.099 43.478 0.00 0.00 0.00 3.27
3993 15253 4.246458 GTTTCCACACATAGAGGTCTGAC 58.754 47.826 0.00 0.00 0.00 3.51
3994 15254 2.092323 TCCACACATAGAGGTCTGACG 58.908 52.381 1.07 0.00 0.00 4.35
3995 15255 1.819288 CCACACATAGAGGTCTGACGT 59.181 52.381 2.15 2.15 0.00 4.34
3996 15256 3.014623 CCACACATAGAGGTCTGACGTA 58.985 50.000 2.59 0.00 0.00 3.57
3997 15257 3.442625 CCACACATAGAGGTCTGACGTAA 59.557 47.826 2.59 0.00 0.00 3.18
3998 15258 4.082408 CCACACATAGAGGTCTGACGTAAA 60.082 45.833 2.59 0.00 0.00 2.01
3999 15259 5.394224 CCACACATAGAGGTCTGACGTAAAT 60.394 44.000 2.59 0.00 0.00 1.40
4000 15260 6.100004 CACACATAGAGGTCTGACGTAAATT 58.900 40.000 2.59 0.00 0.00 1.82
4001 15261 6.590292 CACACATAGAGGTCTGACGTAAATTT 59.410 38.462 2.59 0.00 0.00 1.82
4002 15262 7.117812 CACACATAGAGGTCTGACGTAAATTTT 59.882 37.037 2.59 0.00 0.00 1.82
4003 15263 8.308931 ACACATAGAGGTCTGACGTAAATTTTA 58.691 33.333 2.59 0.00 0.00 1.52
4004 15264 8.592998 CACATAGAGGTCTGACGTAAATTTTAC 58.407 37.037 8.90 8.90 0.00 2.01
4005 15265 8.529476 ACATAGAGGTCTGACGTAAATTTTACT 58.471 33.333 15.38 4.84 0.00 2.24
4006 15266 9.367444 CATAGAGGTCTGACGTAAATTTTACTT 57.633 33.333 15.38 7.69 0.00 2.24
4008 15268 8.754230 AGAGGTCTGACGTAAATTTTACTTAC 57.246 34.615 15.38 8.31 0.00 2.34
4009 15269 8.362639 AGAGGTCTGACGTAAATTTTACTTACA 58.637 33.333 15.38 11.43 30.96 2.41
4010 15270 8.891671 AGGTCTGACGTAAATTTTACTTACAA 57.108 30.769 15.38 0.00 30.96 2.41
4011 15271 8.768019 AGGTCTGACGTAAATTTTACTTACAAC 58.232 33.333 15.38 9.02 30.96 3.32
4012 15272 8.550376 GGTCTGACGTAAATTTTACTTACAACA 58.450 33.333 15.38 2.55 30.96 3.33
4013 15273 9.577003 GTCTGACGTAAATTTTACTTACAACAG 57.423 33.333 15.38 10.23 35.61 3.16
4014 15274 9.531942 TCTGACGTAAATTTTACTTACAACAGA 57.468 29.630 15.38 11.87 37.95 3.41
4015 15275 9.793245 CTGACGTAAATTTTACTTACAACAGAG 57.207 33.333 15.38 1.36 35.93 3.35
4016 15276 9.531942 TGACGTAAATTTTACTTACAACAGAGA 57.468 29.630 15.38 0.00 30.96 3.10
4018 15278 9.538508 ACGTAAATTTTACTTACAACAGAGAGT 57.461 29.630 15.38 1.30 30.96 3.24
4021 15281 7.653767 AATTTTACTTACAACAGAGAGTCCG 57.346 36.000 0.00 0.00 0.00 4.79
4022 15282 5.779529 TTTACTTACAACAGAGAGTCCGT 57.220 39.130 0.00 0.00 0.00 4.69
4023 15283 3.644884 ACTTACAACAGAGAGTCCGTG 57.355 47.619 0.00 0.00 0.00 4.94
4024 15284 2.957006 ACTTACAACAGAGAGTCCGTGT 59.043 45.455 0.00 0.00 0.00 4.49
4025 15285 4.139786 ACTTACAACAGAGAGTCCGTGTA 58.860 43.478 0.00 0.00 0.00 2.90
4026 15286 4.581824 ACTTACAACAGAGAGTCCGTGTAA 59.418 41.667 0.00 0.00 0.00 2.41
4027 15287 5.243283 ACTTACAACAGAGAGTCCGTGTAAT 59.757 40.000 0.00 0.00 0.00 1.89
4028 15288 6.432162 ACTTACAACAGAGAGTCCGTGTAATA 59.568 38.462 0.00 0.00 0.00 0.98
4029 15289 5.916661 ACAACAGAGAGTCCGTGTAATAT 57.083 39.130 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.006859 AGCCTGTTTTGAAAGTTATGGCC 59.993 43.478 0.00 0.00 38.69 5.36
1 2 3.989817 CAGCCTGTTTTGAAAGTTATGGC 59.010 43.478 0.00 0.00 38.24 4.40
2 3 5.452078 TCAGCCTGTTTTGAAAGTTATGG 57.548 39.130 0.00 0.00 0.00 2.74
3 4 7.951530 ATTTCAGCCTGTTTTGAAAGTTATG 57.048 32.000 5.95 0.00 43.97 1.90
4 5 8.962884 AAATTTCAGCCTGTTTTGAAAGTTAT 57.037 26.923 9.89 0.00 44.67 1.89
5 6 8.785329 AAAATTTCAGCCTGTTTTGAAAGTTA 57.215 26.923 11.42 0.00 45.31 2.24
6 7 7.686438 AAAATTTCAGCCTGTTTTGAAAGTT 57.314 28.000 6.78 6.78 46.91 2.66
7 8 7.390162 TCAAAAATTTCAGCCTGTTTTGAAAGT 59.610 29.630 14.83 0.87 43.97 2.66
8 9 7.750769 TCAAAAATTTCAGCCTGTTTTGAAAG 58.249 30.769 14.83 0.00 43.97 2.62
9 10 7.678947 TCAAAAATTTCAGCCTGTTTTGAAA 57.321 28.000 14.83 2.58 42.27 2.69
11 12 6.183360 GCTTCAAAAATTTCAGCCTGTTTTGA 60.183 34.615 13.75 13.75 43.05 2.69
12 13 5.967088 GCTTCAAAAATTTCAGCCTGTTTTG 59.033 36.000 10.42 10.42 39.43 2.44
13 14 5.220643 CGCTTCAAAAATTTCAGCCTGTTTT 60.221 36.000 0.00 0.00 0.00 2.43
14 15 4.270808 CGCTTCAAAAATTTCAGCCTGTTT 59.729 37.500 0.00 0.00 0.00 2.83
15 16 3.803778 CGCTTCAAAAATTTCAGCCTGTT 59.196 39.130 0.00 0.00 0.00 3.16
16 17 3.068024 TCGCTTCAAAAATTTCAGCCTGT 59.932 39.130 0.00 0.00 0.00 4.00
17 18 3.641648 TCGCTTCAAAAATTTCAGCCTG 58.358 40.909 0.00 0.00 0.00 4.85
18 19 4.320608 TTCGCTTCAAAAATTTCAGCCT 57.679 36.364 0.00 0.00 0.00 4.58
19 20 4.084380 CCTTTCGCTTCAAAAATTTCAGCC 60.084 41.667 0.00 0.00 0.00 4.85
20 21 4.084380 CCCTTTCGCTTCAAAAATTTCAGC 60.084 41.667 0.00 0.00 0.00 4.26
21 22 5.175673 GTCCCTTTCGCTTCAAAAATTTCAG 59.824 40.000 0.00 0.00 0.00 3.02
22 23 5.047188 GTCCCTTTCGCTTCAAAAATTTCA 58.953 37.500 0.00 0.00 0.00 2.69
23 24 5.047188 TGTCCCTTTCGCTTCAAAAATTTC 58.953 37.500 0.00 0.00 0.00 2.17
24 25 5.017294 TGTCCCTTTCGCTTCAAAAATTT 57.983 34.783 0.00 0.00 0.00 1.82
25 26 4.664150 TGTCCCTTTCGCTTCAAAAATT 57.336 36.364 0.00 0.00 0.00 1.82
26 27 4.871933 ATGTCCCTTTCGCTTCAAAAAT 57.128 36.364 0.00 0.00 0.00 1.82
27 28 5.975693 ATATGTCCCTTTCGCTTCAAAAA 57.024 34.783 0.00 0.00 0.00 1.94
28 29 5.105917 GGAATATGTCCCTTTCGCTTCAAAA 60.106 40.000 0.00 0.00 41.10 2.44
29 30 4.398044 GGAATATGTCCCTTTCGCTTCAAA 59.602 41.667 0.00 0.00 41.10 2.69
30 31 3.945285 GGAATATGTCCCTTTCGCTTCAA 59.055 43.478 0.00 0.00 41.10 2.69
31 32 3.541632 GGAATATGTCCCTTTCGCTTCA 58.458 45.455 0.00 0.00 41.10 3.02
32 33 2.544267 CGGAATATGTCCCTTTCGCTTC 59.456 50.000 0.00 0.00 44.60 3.86
33 34 2.561569 CGGAATATGTCCCTTTCGCTT 58.438 47.619 0.00 0.00 44.60 4.68
34 35 1.202651 CCGGAATATGTCCCTTTCGCT 60.203 52.381 0.00 0.00 44.60 4.93
35 36 1.226746 CCGGAATATGTCCCTTTCGC 58.773 55.000 0.00 0.00 44.60 4.70
36 37 1.878953 CCCGGAATATGTCCCTTTCG 58.121 55.000 0.73 0.00 44.60 3.46
37 38 1.605753 GCCCGGAATATGTCCCTTTC 58.394 55.000 0.73 0.00 44.60 2.62
38 39 0.185175 GGCCCGGAATATGTCCCTTT 59.815 55.000 0.73 0.00 44.60 3.11
39 40 1.716028 GGGCCCGGAATATGTCCCTT 61.716 60.000 5.69 0.00 44.60 3.95
40 41 2.154074 GGGCCCGGAATATGTCCCT 61.154 63.158 5.69 0.00 44.60 4.20
41 42 2.411765 CTGGGCCCGGAATATGTCCC 62.412 65.000 28.28 1.52 44.60 4.46
42 43 1.073199 CTGGGCCCGGAATATGTCC 59.927 63.158 28.28 0.00 43.90 4.02
43 44 1.600916 GCTGGGCCCGGAATATGTC 60.601 63.158 36.08 10.87 0.00 3.06
44 45 2.515901 GCTGGGCCCGGAATATGT 59.484 61.111 36.08 0.00 0.00 2.29
45 46 2.282462 GGCTGGGCCCGGAATATG 60.282 66.667 36.08 10.45 44.06 1.78
61 62 1.512926 CCTAATTTCGGCCATCTCGG 58.487 55.000 2.24 0.00 38.11 4.63
62 63 0.868406 GCCTAATTTCGGCCATCTCG 59.132 55.000 2.24 0.00 41.73 4.04
69 70 2.098443 TCAATTTCGGCCTAATTTCGGC 59.902 45.455 0.00 9.34 46.83 5.54
70 71 4.568152 ATCAATTTCGGCCTAATTTCGG 57.432 40.909 0.00 0.00 0.00 4.30
71 72 6.885735 AAAATCAATTTCGGCCTAATTTCG 57.114 33.333 0.00 0.00 0.00 3.46
94 95 2.362717 AGTTTTGATTTTCGGCCGGAAA 59.637 40.909 32.76 32.76 42.75 3.13
95 96 1.957877 AGTTTTGATTTTCGGCCGGAA 59.042 42.857 27.83 22.66 0.00 4.30
96 97 1.268352 CAGTTTTGATTTTCGGCCGGA 59.732 47.619 27.83 16.16 0.00 5.14
97 98 1.000717 ACAGTTTTGATTTTCGGCCGG 60.001 47.619 27.83 6.80 0.00 6.13
98 99 2.050691 CACAGTTTTGATTTTCGGCCG 58.949 47.619 22.12 22.12 0.00 6.13
99 100 2.223947 ACCACAGTTTTGATTTTCGGCC 60.224 45.455 0.00 0.00 0.00 6.13
100 101 3.092334 ACCACAGTTTTGATTTTCGGC 57.908 42.857 0.00 0.00 0.00 5.54
101 102 5.008217 TCTGTACCACAGTTTTGATTTTCGG 59.992 40.000 6.23 0.00 46.03 4.30
102 103 5.907391 GTCTGTACCACAGTTTTGATTTTCG 59.093 40.000 6.23 0.00 46.03 3.46
103 104 6.691388 GTGTCTGTACCACAGTTTTGATTTTC 59.309 38.462 6.23 0.00 46.03 2.29
104 105 6.151985 TGTGTCTGTACCACAGTTTTGATTTT 59.848 34.615 6.23 0.00 46.03 1.82
105 106 5.650266 TGTGTCTGTACCACAGTTTTGATTT 59.350 36.000 6.23 0.00 46.03 2.17
106 107 5.189928 TGTGTCTGTACCACAGTTTTGATT 58.810 37.500 6.23 0.00 46.03 2.57
107 108 4.776349 TGTGTCTGTACCACAGTTTTGAT 58.224 39.130 6.23 0.00 46.03 2.57
108 109 4.209307 TGTGTCTGTACCACAGTTTTGA 57.791 40.909 6.23 0.00 46.03 2.69
109 110 4.730613 GCTTGTGTCTGTACCACAGTTTTG 60.731 45.833 6.23 0.00 46.03 2.44
110 111 3.377172 GCTTGTGTCTGTACCACAGTTTT 59.623 43.478 6.23 0.00 46.03 2.43
111 112 2.943033 GCTTGTGTCTGTACCACAGTTT 59.057 45.455 6.23 0.00 46.03 2.66
112 113 2.561569 GCTTGTGTCTGTACCACAGTT 58.438 47.619 6.23 0.00 46.03 3.16
113 114 1.538204 CGCTTGTGTCTGTACCACAGT 60.538 52.381 6.23 0.00 46.03 3.55
115 116 0.878523 GCGCTTGTGTCTGTACCACA 60.879 55.000 0.00 0.00 40.87 4.17
116 117 0.600255 AGCGCTTGTGTCTGTACCAC 60.600 55.000 2.64 0.00 0.00 4.16
117 118 0.105964 AAGCGCTTGTGTCTGTACCA 59.894 50.000 24.40 0.00 0.00 3.25
118 119 2.074547 TAAGCGCTTGTGTCTGTACC 57.925 50.000 32.23 0.00 0.00 3.34
136 137 6.496911 AGGGTGAGTGTATGCATGTGTATATA 59.503 38.462 10.16 0.00 0.00 0.86
145 146 5.372343 TTCATAAGGGTGAGTGTATGCAT 57.628 39.130 3.79 3.79 0.00 3.96
158 159 3.063452 GTGCGTGTGTACATTCATAAGGG 59.937 47.826 0.00 0.00 0.00 3.95
161 162 3.433957 GGTGTGCGTGTGTACATTCATAA 59.566 43.478 0.00 0.00 42.79 1.90
190 191 2.166664 AGTCTTTCGGAGGTGCTCATAC 59.833 50.000 0.00 0.00 31.08 2.39
230 231 6.094048 ACGCCTACAGTAACTTCGTAAATCTA 59.906 38.462 0.00 0.00 0.00 1.98
275 276 1.524008 GCGTTTTTGGTGGGAGGAGG 61.524 60.000 0.00 0.00 0.00 4.30
286 287 4.444056 AGGATTTTCGACAATGCGTTTTTG 59.556 37.500 9.72 0.00 30.14 2.44
287 288 4.444056 CAGGATTTTCGACAATGCGTTTTT 59.556 37.500 9.72 0.00 30.14 1.94
291 292 2.422597 TCAGGATTTTCGACAATGCGT 58.577 42.857 9.72 0.00 30.14 5.24
319 320 3.871006 CGTGGTGCTAGCATTATTTCTGA 59.129 43.478 22.51 0.00 0.00 3.27
332 333 1.208293 TGGTTGATATGCGTGGTGCTA 59.792 47.619 0.00 0.00 46.63 3.49
396 398 2.808906 ATTACTTCCTGCCAGGGAAC 57.191 50.000 11.68 0.00 40.08 3.62
1281 1325 1.697432 CCCTGTGAAGGTTCAGGTACA 59.303 52.381 9.79 0.00 46.79 2.90
1394 1440 3.757270 TGATAGAGTTTCCCCGCAAAAA 58.243 40.909 0.00 0.00 0.00 1.94
1395 1441 3.426787 TGATAGAGTTTCCCCGCAAAA 57.573 42.857 0.00 0.00 0.00 2.44
1396 1442 3.426787 TTGATAGAGTTTCCCCGCAAA 57.573 42.857 0.00 0.00 0.00 3.68
1397 1443 3.343617 CTTTGATAGAGTTTCCCCGCAA 58.656 45.455 0.00 0.00 0.00 4.85
1398 1444 2.939640 GCTTTGATAGAGTTTCCCCGCA 60.940 50.000 0.00 0.00 0.00 5.69
1399 1445 1.671328 GCTTTGATAGAGTTTCCCCGC 59.329 52.381 0.00 0.00 0.00 6.13
1400 1446 3.268023 AGCTTTGATAGAGTTTCCCCG 57.732 47.619 0.00 0.00 0.00 5.73
1401 1447 6.357367 TCATTAGCTTTGATAGAGTTTCCCC 58.643 40.000 0.00 0.00 0.00 4.81
1402 1448 7.936301 AGATCATTAGCTTTGATAGAGTTTCCC 59.064 37.037 10.78 0.00 34.03 3.97
1403 1449 8.772705 CAGATCATTAGCTTTGATAGAGTTTCC 58.227 37.037 10.78 0.00 34.03 3.13
1404 1450 9.539825 TCAGATCATTAGCTTTGATAGAGTTTC 57.460 33.333 10.78 0.62 34.03 2.78
1405 1451 9.896645 TTCAGATCATTAGCTTTGATAGAGTTT 57.103 29.630 10.78 0.00 34.03 2.66
1407 1453 9.709495 GATTCAGATCATTAGCTTTGATAGAGT 57.291 33.333 10.78 9.17 34.03 3.24
1408 1454 9.932207 AGATTCAGATCATTAGCTTTGATAGAG 57.068 33.333 10.78 5.71 34.03 2.43
1409 1455 9.708092 CAGATTCAGATCATTAGCTTTGATAGA 57.292 33.333 10.78 9.55 34.03 1.98
1410 1456 9.708092 TCAGATTCAGATCATTAGCTTTGATAG 57.292 33.333 10.78 7.85 34.03 2.08
1522 1568 9.244292 GGGTATTTTCTAAACAAGATTTCCTCT 57.756 33.333 0.00 0.00 33.05 3.69
1667 3770 1.270550 CATCTGCCCAAACAACCAGAC 59.729 52.381 0.00 0.00 37.18 3.51
1671 3774 0.890683 CTCCATCTGCCCAAACAACC 59.109 55.000 0.00 0.00 0.00 3.77
1694 3797 1.626654 GGTCGCCTCGTCATGTTGTG 61.627 60.000 0.00 0.00 0.00 3.33
1696 3799 0.948623 TTGGTCGCCTCGTCATGTTG 60.949 55.000 0.00 0.00 0.00 3.33
1812 3918 2.039480 AGATTCATCGCACCATAGCCAT 59.961 45.455 0.00 0.00 0.00 4.40
1822 3928 2.985957 TGGATGTCAGATTCATCGCA 57.014 45.000 0.00 0.00 41.54 5.10
2095 4206 9.593134 GGCATAAATTTACAACATAATTGGTGA 57.407 29.630 0.00 0.00 43.67 4.02
2132 4247 9.533983 CTTACACGCAATTAATATCATAGCAAG 57.466 33.333 0.00 0.00 0.00 4.01
2152 4267 4.743151 TGAGTCGTTGAACATGTCTTACAC 59.257 41.667 0.00 0.00 0.00 2.90
2251 4559 3.375699 CTTCCTAGGCTAGAAGTCCCAA 58.624 50.000 22.99 3.29 0.00 4.12
2393 4709 7.698550 GGCTAGCATTTTACTTAGAGCTTTTTC 59.301 37.037 18.24 0.00 33.83 2.29
2417 4733 5.880332 TGTTCCAGTAATACATCTTTCAGGC 59.120 40.000 0.00 0.00 0.00 4.85
2509 4830 0.984230 TGGTCAGGCAAACTAGGGAG 59.016 55.000 0.00 0.00 0.00 4.30
3084 9767 5.240623 AGACAGAATCACAAAAATGCCGTTA 59.759 36.000 0.00 0.00 0.00 3.18
3140 9824 6.908825 AGCACTTATTAAATCGTTGCTTTGA 58.091 32.000 0.00 0.00 0.00 2.69
3144 9828 4.868171 TCGAGCACTTATTAAATCGTTGCT 59.132 37.500 0.00 0.00 0.00 3.91
3217 9997 5.068460 ACATGTTTCAAATTCCCACGAGAAA 59.932 36.000 0.00 0.00 0.00 2.52
3314 10095 2.991866 CACATATCCTAGAGTGCATGCG 59.008 50.000 14.09 0.00 0.00 4.73
3315 10096 3.993081 GACACATATCCTAGAGTGCATGC 59.007 47.826 11.82 11.82 35.47 4.06
3316 10097 5.221402 ACAGACACATATCCTAGAGTGCATG 60.221 44.000 0.00 0.00 35.47 4.06
3317 10098 4.898265 ACAGACACATATCCTAGAGTGCAT 59.102 41.667 0.00 0.00 35.47 3.96
3385 10166 0.450983 GTTCCTAGTCGGTCGACCAG 59.549 60.000 32.80 24.26 45.59 4.00
3492 14619 3.679389 CAGGCAAGTAGTGTGAGGAAAT 58.321 45.455 0.00 0.00 0.00 2.17
3682 14942 2.745379 GGCTGGGCCTTTTCTCAAA 58.255 52.632 4.53 0.00 46.69 2.69
3683 14943 4.519610 GGCTGGGCCTTTTCTCAA 57.480 55.556 4.53 0.00 46.69 3.02
3693 14953 4.041198 TGGTAATATAACTGTAGGCTGGGC 59.959 45.833 0.00 0.00 0.00 5.36
3694 14954 5.307196 AGTGGTAATATAACTGTAGGCTGGG 59.693 44.000 0.00 0.00 0.00 4.45
3695 14955 6.041637 TCAGTGGTAATATAACTGTAGGCTGG 59.958 42.308 0.00 0.00 41.64 4.85
3696 14956 7.050970 TCAGTGGTAATATAACTGTAGGCTG 57.949 40.000 0.00 0.00 41.64 4.85
3697 14957 6.267928 CCTCAGTGGTAATATAACTGTAGGCT 59.732 42.308 0.00 0.00 41.64 4.58
3698 14958 6.267014 TCCTCAGTGGTAATATAACTGTAGGC 59.733 42.308 12.06 0.00 41.64 3.93
3699 14959 7.724506 TCTCCTCAGTGGTAATATAACTGTAGG 59.275 40.741 11.24 11.24 41.64 3.18
3700 14960 8.693120 TCTCCTCAGTGGTAATATAACTGTAG 57.307 38.462 2.31 0.08 41.64 2.74
3702 14962 9.656323 TTATCTCCTCAGTGGTAATATAACTGT 57.344 33.333 2.31 0.00 41.64 3.55
3710 14970 8.598041 GGATTGTATTATCTCCTCAGTGGTAAT 58.402 37.037 0.00 0.00 37.07 1.89
3711 14971 7.789831 AGGATTGTATTATCTCCTCAGTGGTAA 59.210 37.037 0.00 0.00 32.62 2.85
3712 14972 7.306013 AGGATTGTATTATCTCCTCAGTGGTA 58.694 38.462 0.00 0.00 32.62 3.25
3713 14973 6.146760 AGGATTGTATTATCTCCTCAGTGGT 58.853 40.000 0.00 0.00 32.62 4.16
3714 14974 6.678568 AGGATTGTATTATCTCCTCAGTGG 57.321 41.667 0.00 0.00 32.62 4.00
3720 14980 7.493499 CTCATGGAGGATTGTATTATCTCCT 57.507 40.000 8.81 0.00 40.82 3.69
3737 14997 3.115390 CTCTTAAACCCCTCCTCATGGA 58.885 50.000 0.00 0.00 40.69 3.41
3738 14998 2.846827 ACTCTTAAACCCCTCCTCATGG 59.153 50.000 0.00 0.00 0.00 3.66
3739 14999 3.519510 TCACTCTTAAACCCCTCCTCATG 59.480 47.826 0.00 0.00 0.00 3.07
3740 15000 3.777522 CTCACTCTTAAACCCCTCCTCAT 59.222 47.826 0.00 0.00 0.00 2.90
3741 15001 3.173965 CTCACTCTTAAACCCCTCCTCA 58.826 50.000 0.00 0.00 0.00 3.86
3742 15002 2.502130 CCTCACTCTTAAACCCCTCCTC 59.498 54.545 0.00 0.00 0.00 3.71
3743 15003 2.552367 CCTCACTCTTAAACCCCTCCT 58.448 52.381 0.00 0.00 0.00 3.69
3744 15004 1.560146 CCCTCACTCTTAAACCCCTCC 59.440 57.143 0.00 0.00 0.00 4.30
3745 15005 1.560146 CCCCTCACTCTTAAACCCCTC 59.440 57.143 0.00 0.00 0.00 4.30
3746 15006 1.670059 CCCCTCACTCTTAAACCCCT 58.330 55.000 0.00 0.00 0.00 4.79
3747 15007 0.624254 CCCCCTCACTCTTAAACCCC 59.376 60.000 0.00 0.00 0.00 4.95
3748 15008 1.281287 GTCCCCCTCACTCTTAAACCC 59.719 57.143 0.00 0.00 0.00 4.11
3749 15009 1.982958 TGTCCCCCTCACTCTTAAACC 59.017 52.381 0.00 0.00 0.00 3.27
3750 15010 3.519913 AGATGTCCCCCTCACTCTTAAAC 59.480 47.826 0.00 0.00 0.00 2.01
3751 15011 3.775316 GAGATGTCCCCCTCACTCTTAAA 59.225 47.826 0.00 0.00 0.00 1.52
3752 15012 3.375699 GAGATGTCCCCCTCACTCTTAA 58.624 50.000 0.00 0.00 0.00 1.85
3753 15013 2.359355 GGAGATGTCCCCCTCACTCTTA 60.359 54.545 0.00 0.00 36.76 2.10
3754 15014 1.623834 GGAGATGTCCCCCTCACTCTT 60.624 57.143 0.00 0.00 36.76 2.85
3755 15015 0.031616 GGAGATGTCCCCCTCACTCT 60.032 60.000 0.00 0.00 36.76 3.24
3756 15016 0.031616 AGGAGATGTCCCCCTCACTC 60.032 60.000 5.02 0.00 45.26 3.51
3757 15017 1.319947 TAGGAGATGTCCCCCTCACT 58.680 55.000 5.02 0.00 45.26 3.41
3758 15018 2.407340 ATAGGAGATGTCCCCCTCAC 57.593 55.000 5.02 0.00 45.26 3.51
3759 15019 2.795360 TGTATAGGAGATGTCCCCCTCA 59.205 50.000 5.02 0.00 45.26 3.86
3760 15020 3.544698 TGTATAGGAGATGTCCCCCTC 57.455 52.381 5.02 0.00 45.26 4.30
3761 15021 4.510303 AATGTATAGGAGATGTCCCCCT 57.490 45.455 5.02 0.00 45.26 4.79
3762 15022 6.893020 ATAAATGTATAGGAGATGTCCCCC 57.107 41.667 5.02 0.00 45.26 5.40
3784 15044 8.040132 GCTCTTGCTAGAATACATGGAGATTAT 58.960 37.037 0.00 0.00 36.03 1.28
3785 15045 7.382110 GCTCTTGCTAGAATACATGGAGATTA 58.618 38.462 0.00 0.00 36.03 1.75
3786 15046 6.229733 GCTCTTGCTAGAATACATGGAGATT 58.770 40.000 0.00 0.00 36.03 2.40
3787 15047 5.566429 CGCTCTTGCTAGAATACATGGAGAT 60.566 44.000 0.00 0.00 36.97 2.75
3788 15048 4.261783 CGCTCTTGCTAGAATACATGGAGA 60.262 45.833 0.00 0.00 36.97 3.71
3789 15049 3.986572 CGCTCTTGCTAGAATACATGGAG 59.013 47.826 0.00 0.00 36.97 3.86
3790 15050 3.243873 CCGCTCTTGCTAGAATACATGGA 60.244 47.826 0.00 0.00 36.97 3.41
3791 15051 3.062763 CCGCTCTTGCTAGAATACATGG 58.937 50.000 0.00 0.00 36.97 3.66
3792 15052 2.478134 GCCGCTCTTGCTAGAATACATG 59.522 50.000 0.00 0.00 36.97 3.21
3793 15053 2.103094 TGCCGCTCTTGCTAGAATACAT 59.897 45.455 0.00 0.00 36.97 2.29
3794 15054 1.480545 TGCCGCTCTTGCTAGAATACA 59.519 47.619 0.00 0.00 36.97 2.29
3795 15055 2.225068 TGCCGCTCTTGCTAGAATAC 57.775 50.000 0.00 0.00 36.97 1.89
3796 15056 2.826428 CTTGCCGCTCTTGCTAGAATA 58.174 47.619 0.00 0.00 34.16 1.75
3797 15057 1.661341 CTTGCCGCTCTTGCTAGAAT 58.339 50.000 0.00 0.00 34.16 2.40
3798 15058 1.021390 GCTTGCCGCTCTTGCTAGAA 61.021 55.000 0.00 0.00 34.16 2.10
3799 15059 1.448540 GCTTGCCGCTCTTGCTAGA 60.449 57.895 0.00 0.00 34.16 2.43
3800 15060 3.096791 GCTTGCCGCTCTTGCTAG 58.903 61.111 0.00 0.00 36.97 3.42
3809 15069 2.044832 CTAGCACATGAGCTTGCCGC 62.045 60.000 22.83 0.00 43.70 6.53
3810 15070 1.434622 CCTAGCACATGAGCTTGCCG 61.435 60.000 22.83 9.18 43.70 5.69
3811 15071 0.393537 ACCTAGCACATGAGCTTGCC 60.394 55.000 22.83 0.00 43.70 4.52
3812 15072 1.131883 CAACCTAGCACATGAGCTTGC 59.868 52.381 22.83 10.43 43.70 4.01
3813 15073 2.430465 ACAACCTAGCACATGAGCTTG 58.570 47.619 22.83 19.64 43.70 4.01
3814 15074 2.816087 CAACAACCTAGCACATGAGCTT 59.184 45.455 22.83 2.27 43.70 3.74
3816 15076 1.135575 GCAACAACCTAGCACATGAGC 60.136 52.381 7.07 7.07 0.00 4.26
3817 15077 2.161012 CAGCAACAACCTAGCACATGAG 59.839 50.000 0.00 0.00 0.00 2.90
3818 15078 2.153645 CAGCAACAACCTAGCACATGA 58.846 47.619 0.00 0.00 0.00 3.07
3819 15079 1.200716 CCAGCAACAACCTAGCACATG 59.799 52.381 0.00 0.00 0.00 3.21
3820 15080 1.073763 TCCAGCAACAACCTAGCACAT 59.926 47.619 0.00 0.00 0.00 3.21
3821 15081 0.472044 TCCAGCAACAACCTAGCACA 59.528 50.000 0.00 0.00 0.00 4.57
3822 15082 1.740025 GATCCAGCAACAACCTAGCAC 59.260 52.381 0.00 0.00 0.00 4.40
3823 15083 1.630369 AGATCCAGCAACAACCTAGCA 59.370 47.619 0.00 0.00 0.00 3.49
3824 15084 2.409948 AGATCCAGCAACAACCTAGC 57.590 50.000 0.00 0.00 0.00 3.42
3825 15085 4.187694 GAGAAGATCCAGCAACAACCTAG 58.812 47.826 0.00 0.00 0.00 3.02
3826 15086 3.582647 TGAGAAGATCCAGCAACAACCTA 59.417 43.478 0.00 0.00 0.00 3.08
3827 15087 2.373169 TGAGAAGATCCAGCAACAACCT 59.627 45.455 0.00 0.00 0.00 3.50
3828 15088 2.485814 GTGAGAAGATCCAGCAACAACC 59.514 50.000 0.00 0.00 0.00 3.77
3829 15089 2.158449 CGTGAGAAGATCCAGCAACAAC 59.842 50.000 0.00 0.00 0.00 3.32
3830 15090 2.416747 CGTGAGAAGATCCAGCAACAA 58.583 47.619 0.00 0.00 0.00 2.83
3831 15091 1.338105 CCGTGAGAAGATCCAGCAACA 60.338 52.381 0.00 0.00 0.00 3.33
3832 15092 1.363744 CCGTGAGAAGATCCAGCAAC 58.636 55.000 0.00 0.00 0.00 4.17
3833 15093 0.391661 GCCGTGAGAAGATCCAGCAA 60.392 55.000 0.00 0.00 0.00 3.91
3834 15094 1.219124 GCCGTGAGAAGATCCAGCA 59.781 57.895 0.00 0.00 0.00 4.41
3835 15095 1.522580 GGCCGTGAGAAGATCCAGC 60.523 63.158 0.00 0.00 0.00 4.85
3836 15096 0.539051 AAGGCCGTGAGAAGATCCAG 59.461 55.000 0.00 0.00 0.00 3.86
3837 15097 0.250234 CAAGGCCGTGAGAAGATCCA 59.750 55.000 14.14 0.00 0.00 3.41
3838 15098 0.537188 TCAAGGCCGTGAGAAGATCC 59.463 55.000 18.10 0.00 0.00 3.36
3839 15099 2.208431 CATCAAGGCCGTGAGAAGATC 58.792 52.381 25.56 0.00 0.00 2.75
3840 15100 1.134280 CCATCAAGGCCGTGAGAAGAT 60.134 52.381 25.56 6.71 0.00 2.40
3841 15101 0.250234 CCATCAAGGCCGTGAGAAGA 59.750 55.000 25.56 3.40 0.00 2.87
3842 15102 0.036010 ACCATCAAGGCCGTGAGAAG 60.036 55.000 25.56 18.05 43.14 2.85
3843 15103 0.321564 CACCATCAAGGCCGTGAGAA 60.322 55.000 25.56 4.19 43.14 2.87
3844 15104 1.191489 TCACCATCAAGGCCGTGAGA 61.191 55.000 25.56 14.82 43.14 3.27
3845 15105 1.021390 GTCACCATCAAGGCCGTGAG 61.021 60.000 25.56 15.76 43.14 3.51
3846 15106 1.003839 GTCACCATCAAGGCCGTGA 60.004 57.895 23.96 23.96 43.14 4.35
3847 15107 0.606401 AAGTCACCATCAAGGCCGTG 60.606 55.000 13.08 13.08 43.14 4.94
3848 15108 0.321653 GAAGTCACCATCAAGGCCGT 60.322 55.000 0.00 0.00 43.14 5.68
3849 15109 0.321564 TGAAGTCACCATCAAGGCCG 60.322 55.000 0.00 0.00 43.14 6.13
3850 15110 1.168714 GTGAAGTCACCATCAAGGCC 58.831 55.000 0.00 0.00 43.14 5.19
3856 15116 7.522725 ATGAAAATGTTCAGTGAAGTCACCATC 60.523 37.037 5.62 2.41 46.75 3.51
3857 15117 6.266103 ATGAAAATGTTCAGTGAAGTCACCAT 59.734 34.615 5.62 2.96 46.75 3.55
3858 15118 5.593909 ATGAAAATGTTCAGTGAAGTCACCA 59.406 36.000 5.62 0.36 46.75 4.17
3859 15119 5.916883 CATGAAAATGTTCAGTGAAGTCACC 59.083 40.000 5.62 0.00 46.75 4.02
3860 15120 6.728200 TCATGAAAATGTTCAGTGAAGTCAC 58.272 36.000 5.62 3.12 46.75 3.67
3861 15121 6.016860 CCTCATGAAAATGTTCAGTGAAGTCA 60.017 38.462 5.62 1.95 46.75 3.41
3862 15122 6.016777 ACCTCATGAAAATGTTCAGTGAAGTC 60.017 38.462 5.62 0.00 46.75 3.01
3863 15123 5.829924 ACCTCATGAAAATGTTCAGTGAAGT 59.170 36.000 5.62 5.71 46.75 3.01
3864 15124 6.323203 ACCTCATGAAAATGTTCAGTGAAG 57.677 37.500 5.62 5.18 46.75 3.02
3865 15125 5.241506 GGACCTCATGAAAATGTTCAGTGAA 59.758 40.000 4.31 0.08 46.75 3.18
3866 15126 4.761739 GGACCTCATGAAAATGTTCAGTGA 59.238 41.667 4.31 7.35 46.75 3.41
3867 15127 4.082571 GGGACCTCATGAAAATGTTCAGTG 60.083 45.833 4.31 3.58 46.75 3.66
3868 15128 4.082125 GGGACCTCATGAAAATGTTCAGT 58.918 43.478 4.31 0.00 46.75 3.41
3869 15129 4.338879 AGGGACCTCATGAAAATGTTCAG 58.661 43.478 4.31 0.00 46.75 3.02
3871 15131 5.355350 CAGTAGGGACCTCATGAAAATGTTC 59.645 44.000 0.00 0.00 0.00 3.18
3872 15132 5.222130 ACAGTAGGGACCTCATGAAAATGTT 60.222 40.000 0.00 0.00 0.00 2.71
3873 15133 4.289672 ACAGTAGGGACCTCATGAAAATGT 59.710 41.667 0.00 0.00 0.00 2.71
3874 15134 4.848357 ACAGTAGGGACCTCATGAAAATG 58.152 43.478 0.00 0.00 0.00 2.32
3875 15135 4.080299 GGACAGTAGGGACCTCATGAAAAT 60.080 45.833 0.00 0.00 0.00 1.82
3876 15136 3.263425 GGACAGTAGGGACCTCATGAAAA 59.737 47.826 0.00 0.00 0.00 2.29
3877 15137 2.838202 GGACAGTAGGGACCTCATGAAA 59.162 50.000 0.00 0.00 0.00 2.69
3878 15138 2.467880 GGACAGTAGGGACCTCATGAA 58.532 52.381 0.00 0.00 0.00 2.57
3879 15139 1.685180 CGGACAGTAGGGACCTCATGA 60.685 57.143 9.07 0.00 0.00 3.07
3880 15140 0.747255 CGGACAGTAGGGACCTCATG 59.253 60.000 0.00 0.00 0.00 3.07
3881 15141 0.335361 ACGGACAGTAGGGACCTCAT 59.665 55.000 0.00 0.00 0.00 2.90
3882 15142 0.611062 CACGGACAGTAGGGACCTCA 60.611 60.000 0.00 0.00 0.00 3.86
3883 15143 0.323178 TCACGGACAGTAGGGACCTC 60.323 60.000 0.00 0.00 0.00 3.85
3884 15144 0.611340 GTCACGGACAGTAGGGACCT 60.611 60.000 0.00 0.00 32.09 3.85
3885 15145 0.896940 TGTCACGGACAGTAGGGACC 60.897 60.000 8.07 0.00 37.67 4.46
3886 15146 0.963962 TTGTCACGGACAGTAGGGAC 59.036 55.000 6.79 4.37 43.69 4.46
3887 15147 1.254026 CTTGTCACGGACAGTAGGGA 58.746 55.000 6.79 0.00 43.69 4.20
3888 15148 0.246635 CCTTGTCACGGACAGTAGGG 59.753 60.000 13.08 8.64 43.69 3.53
3889 15149 0.246635 CCCTTGTCACGGACAGTAGG 59.753 60.000 13.60 13.60 43.69 3.18
3890 15150 0.246635 CCCCTTGTCACGGACAGTAG 59.753 60.000 0.00 3.73 43.69 2.57
3891 15151 1.189524 CCCCCTTGTCACGGACAGTA 61.190 60.000 0.00 0.00 43.69 2.74
3892 15152 2.516888 CCCCCTTGTCACGGACAGT 61.517 63.158 0.00 0.00 43.69 3.55
3893 15153 1.764571 TTCCCCCTTGTCACGGACAG 61.765 60.000 0.00 3.07 43.69 3.51
3894 15154 1.346479 TTTCCCCCTTGTCACGGACA 61.346 55.000 0.00 3.02 41.09 4.02
3895 15155 0.179012 TTTTCCCCCTTGTCACGGAC 60.179 55.000 0.00 0.00 0.00 4.79
3896 15156 0.109723 CTTTTCCCCCTTGTCACGGA 59.890 55.000 0.00 0.00 0.00 4.69
3897 15157 0.893727 CCTTTTCCCCCTTGTCACGG 60.894 60.000 0.00 0.00 0.00 4.94
3898 15158 0.893727 CCCTTTTCCCCCTTGTCACG 60.894 60.000 0.00 0.00 0.00 4.35
3899 15159 1.185618 GCCCTTTTCCCCCTTGTCAC 61.186 60.000 0.00 0.00 0.00 3.67
3900 15160 1.155155 GCCCTTTTCCCCCTTGTCA 59.845 57.895 0.00 0.00 0.00 3.58
3901 15161 0.900182 CTGCCCTTTTCCCCCTTGTC 60.900 60.000 0.00 0.00 0.00 3.18
3902 15162 1.156095 CTGCCCTTTTCCCCCTTGT 59.844 57.895 0.00 0.00 0.00 3.16
3903 15163 0.041684 ATCTGCCCTTTTCCCCCTTG 59.958 55.000 0.00 0.00 0.00 3.61
3904 15164 0.792960 AATCTGCCCTTTTCCCCCTT 59.207 50.000 0.00 0.00 0.00 3.95
3905 15165 0.041684 CAATCTGCCCTTTTCCCCCT 59.958 55.000 0.00 0.00 0.00 4.79
3906 15166 0.041090 TCAATCTGCCCTTTTCCCCC 59.959 55.000 0.00 0.00 0.00 5.40
3907 15167 2.165357 ATCAATCTGCCCTTTTCCCC 57.835 50.000 0.00 0.00 0.00 4.81
3908 15168 2.833943 ACAATCAATCTGCCCTTTTCCC 59.166 45.455 0.00 0.00 0.00 3.97
3909 15169 3.259123 ACACAATCAATCTGCCCTTTTCC 59.741 43.478 0.00 0.00 0.00 3.13
3910 15170 4.525912 ACACAATCAATCTGCCCTTTTC 57.474 40.909 0.00 0.00 0.00 2.29
3911 15171 6.610075 ATTACACAATCAATCTGCCCTTTT 57.390 33.333 0.00 0.00 0.00 2.27
3912 15172 6.610075 AATTACACAATCAATCTGCCCTTT 57.390 33.333 0.00 0.00 0.00 3.11
3913 15173 6.211184 TCAAATTACACAATCAATCTGCCCTT 59.789 34.615 0.00 0.00 0.00 3.95
3914 15174 5.716228 TCAAATTACACAATCAATCTGCCCT 59.284 36.000 0.00 0.00 0.00 5.19
3915 15175 5.964758 TCAAATTACACAATCAATCTGCCC 58.035 37.500 0.00 0.00 0.00 5.36
3916 15176 7.092716 ACTTCAAATTACACAATCAATCTGCC 58.907 34.615 0.00 0.00 0.00 4.85
3917 15177 7.274250 GGACTTCAAATTACACAATCAATCTGC 59.726 37.037 0.00 0.00 0.00 4.26
3918 15178 8.298854 TGGACTTCAAATTACACAATCAATCTG 58.701 33.333 0.00 0.00 0.00 2.90
3919 15179 8.408043 TGGACTTCAAATTACACAATCAATCT 57.592 30.769 0.00 0.00 0.00 2.40
3920 15180 8.299570 ACTGGACTTCAAATTACACAATCAATC 58.700 33.333 0.00 0.00 0.00 2.67
3921 15181 8.181904 ACTGGACTTCAAATTACACAATCAAT 57.818 30.769 0.00 0.00 0.00 2.57
3922 15182 7.581213 ACTGGACTTCAAATTACACAATCAA 57.419 32.000 0.00 0.00 0.00 2.57
3923 15183 7.094805 GCTACTGGACTTCAAATTACACAATCA 60.095 37.037 0.00 0.00 0.00 2.57
3924 15184 7.244192 GCTACTGGACTTCAAATTACACAATC 58.756 38.462 0.00 0.00 0.00 2.67
3925 15185 6.128282 CGCTACTGGACTTCAAATTACACAAT 60.128 38.462 0.00 0.00 0.00 2.71
3926 15186 5.178623 CGCTACTGGACTTCAAATTACACAA 59.821 40.000 0.00 0.00 0.00 3.33
3927 15187 4.688879 CGCTACTGGACTTCAAATTACACA 59.311 41.667 0.00 0.00 0.00 3.72
3928 15188 4.435651 GCGCTACTGGACTTCAAATTACAC 60.436 45.833 0.00 0.00 0.00 2.90
3929 15189 3.682858 GCGCTACTGGACTTCAAATTACA 59.317 43.478 0.00 0.00 0.00 2.41
3930 15190 3.933332 AGCGCTACTGGACTTCAAATTAC 59.067 43.478 8.99 0.00 0.00 1.89
3931 15191 3.932710 CAGCGCTACTGGACTTCAAATTA 59.067 43.478 10.99 0.00 43.19 1.40
3932 15192 2.744202 CAGCGCTACTGGACTTCAAATT 59.256 45.455 10.99 0.00 43.19 1.82
3933 15193 2.350522 CAGCGCTACTGGACTTCAAAT 58.649 47.619 10.99 0.00 43.19 2.32
3934 15194 1.795768 CAGCGCTACTGGACTTCAAA 58.204 50.000 10.99 0.00 43.19 2.69
3935 15195 3.514777 CAGCGCTACTGGACTTCAA 57.485 52.632 10.99 0.00 43.19 2.69
3943 15203 1.224075 CATCCATTCCAGCGCTACTG 58.776 55.000 10.99 5.10 46.77 2.74
3944 15204 0.533755 GCATCCATTCCAGCGCTACT 60.534 55.000 10.99 0.00 0.00 2.57
3945 15205 0.815213 TGCATCCATTCCAGCGCTAC 60.815 55.000 10.99 0.00 0.00 3.58
3946 15206 0.815213 GTGCATCCATTCCAGCGCTA 60.815 55.000 10.99 0.00 34.84 4.26
3947 15207 2.117156 GTGCATCCATTCCAGCGCT 61.117 57.895 2.64 2.64 34.84 5.92
3948 15208 2.332362 CTGTGCATCCATTCCAGCGC 62.332 60.000 0.00 0.00 37.95 5.92
3949 15209 1.028330 ACTGTGCATCCATTCCAGCG 61.028 55.000 0.00 0.00 0.00 5.18
3950 15210 0.737219 GACTGTGCATCCATTCCAGC 59.263 55.000 0.00 0.00 0.00 4.85
3951 15211 2.014857 CAGACTGTGCATCCATTCCAG 58.985 52.381 0.00 0.00 0.00 3.86
3952 15212 1.352017 ACAGACTGTGCATCCATTCCA 59.648 47.619 7.47 0.00 0.00 3.53
3953 15213 2.119801 ACAGACTGTGCATCCATTCC 57.880 50.000 7.47 0.00 0.00 3.01
3954 15214 3.119708 GGAAACAGACTGTGCATCCATTC 60.120 47.826 21.67 14.43 32.17 2.67
3955 15215 2.821969 GGAAACAGACTGTGCATCCATT 59.178 45.455 21.67 7.93 32.17 3.16
3956 15216 2.224843 TGGAAACAGACTGTGCATCCAT 60.225 45.455 23.87 1.76 35.13 3.41
3957 15217 1.142667 TGGAAACAGACTGTGCATCCA 59.857 47.619 23.87 23.87 36.62 3.41
3958 15218 1.537202 GTGGAAACAGACTGTGCATCC 59.463 52.381 20.56 20.56 44.46 3.51
3959 15219 2.221169 TGTGGAAACAGACTGTGCATC 58.779 47.619 9.33 8.16 44.46 3.91
3960 15220 2.346766 TGTGGAAACAGACTGTGCAT 57.653 45.000 9.33 0.00 44.46 3.96
3961 15221 3.871701 TGTGGAAACAGACTGTGCA 57.128 47.368 9.33 0.00 44.46 4.57
3968 15228 4.021104 CAGACCTCTATGTGTGGAAACAGA 60.021 45.833 0.00 0.00 44.46 3.41
3969 15229 4.021104 TCAGACCTCTATGTGTGGAAACAG 60.021 45.833 0.00 0.00 44.46 3.16
3970 15230 3.901222 TCAGACCTCTATGTGTGGAAACA 59.099 43.478 0.00 0.00 38.70 2.83
3971 15231 4.246458 GTCAGACCTCTATGTGTGGAAAC 58.754 47.826 0.00 0.00 33.75 2.78
3972 15232 3.056821 CGTCAGACCTCTATGTGTGGAAA 60.057 47.826 0.00 0.00 33.75 3.13
3973 15233 2.492088 CGTCAGACCTCTATGTGTGGAA 59.508 50.000 0.00 0.00 33.75 3.53
3974 15234 2.092323 CGTCAGACCTCTATGTGTGGA 58.908 52.381 0.00 0.00 33.75 4.02
3975 15235 1.819288 ACGTCAGACCTCTATGTGTGG 59.181 52.381 0.00 0.00 35.56 4.17
3976 15236 4.696899 TTACGTCAGACCTCTATGTGTG 57.303 45.455 0.00 0.00 0.00 3.82
3977 15237 5.916661 ATTTACGTCAGACCTCTATGTGT 57.083 39.130 0.00 0.00 0.00 3.72
3978 15238 7.596749 AAAATTTACGTCAGACCTCTATGTG 57.403 36.000 0.00 0.00 0.00 3.21
3979 15239 8.529476 AGTAAAATTTACGTCAGACCTCTATGT 58.471 33.333 9.88 0.00 0.00 2.29
3980 15240 8.928270 AGTAAAATTTACGTCAGACCTCTATG 57.072 34.615 9.88 0.00 0.00 2.23
3982 15242 9.846248 GTAAGTAAAATTTACGTCAGACCTCTA 57.154 33.333 7.54 0.00 0.00 2.43
3983 15243 8.362639 TGTAAGTAAAATTTACGTCAGACCTCT 58.637 33.333 7.54 0.00 34.51 3.69
3984 15244 8.524870 TGTAAGTAAAATTTACGTCAGACCTC 57.475 34.615 7.54 0.00 34.51 3.85
3985 15245 8.768019 GTTGTAAGTAAAATTTACGTCAGACCT 58.232 33.333 7.54 0.00 34.51 3.85
3986 15246 8.550376 TGTTGTAAGTAAAATTTACGTCAGACC 58.450 33.333 7.54 0.00 34.51 3.85
3987 15247 9.577003 CTGTTGTAAGTAAAATTTACGTCAGAC 57.423 33.333 7.54 7.43 36.98 3.51
3988 15248 9.531942 TCTGTTGTAAGTAAAATTTACGTCAGA 57.468 29.630 7.54 10.80 38.87 3.27
3989 15249 9.793245 CTCTGTTGTAAGTAAAATTTACGTCAG 57.207 33.333 7.54 8.99 36.64 3.51
3990 15250 9.531942 TCTCTGTTGTAAGTAAAATTTACGTCA 57.468 29.630 7.54 6.99 34.51 4.35
3992 15252 9.538508 ACTCTCTGTTGTAAGTAAAATTTACGT 57.461 29.630 9.88 9.48 34.51 3.57
3995 15255 9.199982 CGGACTCTCTGTTGTAAGTAAAATTTA 57.800 33.333 0.00 0.00 0.00 1.40
3996 15256 7.713942 ACGGACTCTCTGTTGTAAGTAAAATTT 59.286 33.333 0.00 0.00 30.35 1.82
3997 15257 7.170998 CACGGACTCTCTGTTGTAAGTAAAATT 59.829 37.037 0.00 0.00 32.75 1.82
3998 15258 6.645415 CACGGACTCTCTGTTGTAAGTAAAAT 59.355 38.462 0.00 0.00 32.75 1.82
3999 15259 5.981315 CACGGACTCTCTGTTGTAAGTAAAA 59.019 40.000 0.00 0.00 32.75 1.52
4000 15260 5.068198 ACACGGACTCTCTGTTGTAAGTAAA 59.932 40.000 0.00 0.00 32.75 2.01
4001 15261 4.581824 ACACGGACTCTCTGTTGTAAGTAA 59.418 41.667 0.00 0.00 32.75 2.24
4002 15262 4.139786 ACACGGACTCTCTGTTGTAAGTA 58.860 43.478 0.00 0.00 32.75 2.24
4003 15263 2.957006 ACACGGACTCTCTGTTGTAAGT 59.043 45.455 0.00 0.00 32.75 2.24
4004 15264 3.644884 ACACGGACTCTCTGTTGTAAG 57.355 47.619 0.00 0.00 32.75 2.34
4005 15265 5.717078 ATTACACGGACTCTCTGTTGTAA 57.283 39.130 0.00 0.00 32.75 2.41
4007 15267 5.916661 ATATTACACGGACTCTCTGTTGT 57.083 39.130 0.00 0.00 32.75 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.