Multiple sequence alignment - TraesCS3A01G425500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G425500 chr3A 100.000 7921 0 0 1 7921 667800373 667792453 0.000000e+00 14628.0
1 TraesCS3A01G425500 chr3A 95.556 45 1 1 4102 4145 667796074 667796118 3.970000e-08 71.3
2 TraesCS3A01G425500 chr3A 95.556 45 1 1 4256 4300 667796229 667796272 3.970000e-08 71.3
3 TraesCS3A01G425500 chr3B 93.835 5969 269 37 1601 7509 704712039 704706110 0.000000e+00 8892.0
4 TraesCS3A01G425500 chr3B 88.433 951 72 24 639 1561 704712974 704712034 0.000000e+00 1112.0
5 TraesCS3A01G425500 chr3B 92.371 367 21 5 7561 7921 704704912 704704547 4.240000e-142 516.0
6 TraesCS3A01G425500 chr3B 93.846 65 3 1 3937 4000 704709430 704709366 6.540000e-16 97.1
7 TraesCS3A01G425500 chr3B 95.556 45 1 1 4102 4145 704709313 704709357 3.970000e-08 71.3
8 TraesCS3A01G425500 chr3B 93.333 45 2 1 4256 4300 704709468 704709511 1.850000e-06 65.8
9 TraesCS3A01G425500 chr3D 97.171 4348 108 6 1964 6296 532693166 532688819 0.000000e+00 7334.0
10 TraesCS3A01G425500 chr3D 97.321 1232 30 2 6307 7536 532688839 532687609 0.000000e+00 2089.0
11 TraesCS3A01G425500 chr3D 92.874 1235 55 15 637 1856 532694379 532693163 0.000000e+00 1762.0
12 TraesCS3A01G425500 chr3D 95.556 45 1 1 4256 4300 532690980 532691023 3.970000e-08 71.3
13 TraesCS3A01G425500 chr1D 89.000 400 37 6 3735 4131 480583552 480583947 9.240000e-134 488.0
14 TraesCS3A01G425500 chr1D 90.813 283 23 3 360 641 259254059 259254339 7.500000e-100 375.0
15 TraesCS3A01G425500 chr1B 85.037 401 53 7 3735 4131 668953431 668953828 1.240000e-107 401.0
16 TraesCS3A01G425500 chr7A 91.667 276 19 4 362 635 66411438 66411165 5.800000e-101 379.0
17 TraesCS3A01G425500 chr2A 91.636 275 21 2 362 635 39930532 39930259 5.800000e-101 379.0
18 TraesCS3A01G425500 chr2A 77.519 129 20 5 179 298 138151038 138151166 1.430000e-07 69.4
19 TraesCS3A01G425500 chr7B 91.039 279 23 2 360 637 468145289 468145012 7.500000e-100 375.0
20 TraesCS3A01G425500 chr7D 91.273 275 21 3 362 635 282878384 282878112 9.710000e-99 372.0
21 TraesCS3A01G425500 chr5B 90.714 280 24 2 359 637 554812317 554812595 9.710000e-99 372.0
22 TraesCS3A01G425500 chr5B 90.681 279 24 2 360 637 592312024 592312301 3.490000e-98 370.0
23 TraesCS3A01G425500 chr4B 90.714 280 24 2 360 638 545236566 545236844 9.710000e-99 372.0
24 TraesCS3A01G425500 chr6A 89.583 288 27 3 360 646 593832357 593832072 5.840000e-96 363.0
25 TraesCS3A01G425500 chr6A 78.169 142 22 5 177 309 407077005 407077146 1.830000e-11 82.4
26 TraesCS3A01G425500 chr2B 81.553 206 29 4 165 361 27706408 27706613 2.290000e-35 161.0
27 TraesCS3A01G425500 chr1A 76.923 143 23 7 177 309 443028436 443028578 1.100000e-08 73.1
28 TraesCS3A01G425500 chr5A 87.273 55 5 2 276 330 592032800 592032852 2.390000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G425500 chr3A 667792453 667800373 7920 True 14628.000000 14628 100.000000 1 7921 1 chr3A.!!$R1 7920
1 TraesCS3A01G425500 chr3B 704704547 704712974 8427 True 2654.275000 8892 92.121250 639 7921 4 chr3B.!!$R1 7282
2 TraesCS3A01G425500 chr3D 532687609 532694379 6770 True 3728.333333 7334 95.788667 637 7536 3 chr3D.!!$R1 6899

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 166 0.030235 CGACCTCACGTTGACTGACA 59.970 55.000 0.00 0.0 0.00 3.58 F
278 279 0.036952 CTGATGACCGGAGCAACACT 60.037 55.000 9.46 0.0 0.00 3.55 F
282 283 0.179234 TGACCGGAGCAACACTTTGA 59.821 50.000 9.46 0.0 34.24 2.69 F
1787 1845 0.030638 GATCTCTCTGCGCCTCTGAC 59.969 60.000 4.18 0.0 0.00 3.51 F
2034 2100 0.807496 GGAAACTGCATCTGCCAGAC 59.193 55.000 0.00 0.0 41.18 3.51 F
3058 3134 0.744414 GAGCCCTTGCGCACATTCTA 60.744 55.000 11.12 0.0 44.33 2.10 F
3301 3377 0.758734 TCATGAGGCGTATTGAGGGG 59.241 55.000 0.00 0.0 0.00 4.79 F
3764 3841 1.151450 CTGGGCTGAGGTTGGTGTT 59.849 57.895 0.00 0.0 0.00 3.32 F
4695 4774 2.159142 CGGCCTTACACTAATCGAGGTT 60.159 50.000 0.00 0.0 0.00 3.50 F
5763 5848 0.251474 ACCTGCAGCACATCAACCAT 60.251 50.000 8.66 0.0 0.00 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1301 1346 0.764890 CTTTCACCACCTCCTCCACA 59.235 55.000 0.00 0.00 0.00 4.17 R
1344 1389 1.208052 CACGACCTTGATCCATGTCCT 59.792 52.381 0.00 0.00 0.00 3.85 R
2244 2313 1.442520 CATCAAACAAGCCACGCCG 60.443 57.895 0.00 0.00 0.00 6.46 R
2678 2747 0.113580 TTTGGTTTACCTGCCCTCCC 59.886 55.000 0.00 0.00 36.82 4.30 R
3067 3143 0.750249 CCTGTTCGCCCAAAACCTTT 59.250 50.000 0.00 0.00 0.00 3.11 R
3900 3977 0.904865 TCGGATCAGGCCTTGACAGT 60.905 55.000 0.00 0.00 38.99 3.55 R
4619 4698 1.035139 CTGCAGGGGATAACCAATGC 58.965 55.000 5.57 9.84 44.23 3.56 R
4730 4815 1.339438 TGAGAACAGGGAAGCATCAGC 60.339 52.381 0.00 0.00 42.56 4.26 R
6066 6151 0.108804 GCATCCTCGTTGACTTCCGA 60.109 55.000 0.00 0.00 0.00 4.55 R
7580 8834 1.272769 ACGTGCTTCTAACTCCCTGTC 59.727 52.381 0.00 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.494445 CAGGATGGCGCGACAGTA 59.506 61.111 23.88 0.00 0.00 2.74
24 25 1.878522 CAGGATGGCGCGACAGTAC 60.879 63.158 23.88 13.41 0.00 2.73
25 26 2.052690 AGGATGGCGCGACAGTACT 61.053 57.895 23.88 15.76 0.00 2.73
26 27 1.153628 GGATGGCGCGACAGTACTT 60.154 57.895 23.88 1.33 0.00 2.24
27 28 1.421410 GGATGGCGCGACAGTACTTG 61.421 60.000 23.88 0.00 0.00 3.16
28 29 0.736325 GATGGCGCGACAGTACTTGT 60.736 55.000 23.88 0.00 44.55 3.16
29 30 1.014044 ATGGCGCGACAGTACTTGTG 61.014 55.000 23.88 0.00 41.05 3.33
30 31 1.372499 GGCGCGACAGTACTTGTGA 60.372 57.895 12.10 0.00 41.05 3.58
31 32 0.736325 GGCGCGACAGTACTTGTGAT 60.736 55.000 12.10 0.00 41.05 3.06
32 33 1.468565 GGCGCGACAGTACTTGTGATA 60.469 52.381 12.10 0.00 41.05 2.15
33 34 1.846782 GCGCGACAGTACTTGTGATAG 59.153 52.381 12.10 0.00 41.05 2.08
34 35 2.477357 GCGCGACAGTACTTGTGATAGA 60.477 50.000 12.10 0.00 41.05 1.98
35 36 3.099362 CGCGACAGTACTTGTGATAGAC 58.901 50.000 0.00 0.00 41.05 2.59
36 37 3.099362 GCGACAGTACTTGTGATAGACG 58.901 50.000 0.00 0.00 41.05 4.18
37 38 3.099362 CGACAGTACTTGTGATAGACGC 58.901 50.000 0.00 0.00 41.05 5.19
38 39 3.436496 GACAGTACTTGTGATAGACGCC 58.564 50.000 0.00 0.00 41.05 5.68
39 40 2.159421 ACAGTACTTGTGATAGACGCCG 60.159 50.000 0.00 0.00 38.99 6.46
40 41 1.404391 AGTACTTGTGATAGACGCCGG 59.596 52.381 0.00 0.00 0.00 6.13
41 42 0.742505 TACTTGTGATAGACGCCGGG 59.257 55.000 2.18 0.00 0.00 5.73
42 43 1.227263 CTTGTGATAGACGCCGGGG 60.227 63.158 18.33 18.33 0.00 5.73
43 44 1.672854 CTTGTGATAGACGCCGGGGA 61.673 60.000 27.23 2.56 0.00 4.81
44 45 1.672854 TTGTGATAGACGCCGGGGAG 61.673 60.000 27.23 0.00 0.00 4.30
45 46 2.520982 TGATAGACGCCGGGGAGG 60.521 66.667 27.23 0.00 44.97 4.30
46 47 3.303928 GATAGACGCCGGGGAGGG 61.304 72.222 27.23 0.00 41.48 4.30
58 59 3.462678 GGAGGGGGAGTCGCACTC 61.463 72.222 27.01 27.01 44.32 3.51
59 60 2.363147 GAGGGGGAGTCGCACTCT 60.363 66.667 27.49 13.06 44.46 3.24
60 61 2.363147 AGGGGGAGTCGCACTCTC 60.363 66.667 6.06 10.67 44.95 3.20
61 62 2.363147 GGGGGAGTCGCACTCTCT 60.363 66.667 9.66 0.00 45.03 3.10
62 63 1.076923 GGGGGAGTCGCACTCTCTA 60.077 63.158 9.66 0.00 45.03 2.43
63 64 1.104577 GGGGGAGTCGCACTCTCTAG 61.105 65.000 9.66 0.00 45.03 2.43
64 65 1.730451 GGGGAGTCGCACTCTCTAGC 61.730 65.000 9.66 0.00 45.03 3.42
70 71 3.201494 GCACTCTCTAGCGCCTCA 58.799 61.111 2.29 0.00 0.00 3.86
71 72 1.739049 GCACTCTCTAGCGCCTCAT 59.261 57.895 2.29 0.00 0.00 2.90
72 73 0.597118 GCACTCTCTAGCGCCTCATG 60.597 60.000 2.29 0.00 0.00 3.07
73 74 0.743688 CACTCTCTAGCGCCTCATGT 59.256 55.000 2.29 0.00 0.00 3.21
74 75 0.743688 ACTCTCTAGCGCCTCATGTG 59.256 55.000 2.29 0.00 0.00 3.21
75 76 1.028130 CTCTCTAGCGCCTCATGTGA 58.972 55.000 2.29 0.00 0.00 3.58
76 77 1.612950 CTCTCTAGCGCCTCATGTGAT 59.387 52.381 2.29 0.00 0.00 3.06
77 78 1.339291 TCTCTAGCGCCTCATGTGATG 59.661 52.381 2.29 0.00 0.00 3.07
78 79 0.390492 TCTAGCGCCTCATGTGATGG 59.610 55.000 2.29 0.00 0.00 3.51
79 80 1.226686 CTAGCGCCTCATGTGATGGC 61.227 60.000 2.29 11.20 42.94 4.40
80 81 2.665008 TAGCGCCTCATGTGATGGCC 62.665 60.000 2.29 0.00 43.42 5.36
81 82 2.191375 CGCCTCATGTGATGGCCT 59.809 61.111 3.32 0.00 43.42 5.19
82 83 2.184830 CGCCTCATGTGATGGCCTG 61.185 63.158 3.32 0.00 43.42 4.85
83 84 2.487532 GCCTCATGTGATGGCCTGC 61.488 63.158 3.32 0.00 40.71 4.85
84 85 1.077285 CCTCATGTGATGGCCTGCA 60.077 57.895 3.32 0.00 0.00 4.41
85 86 0.681887 CCTCATGTGATGGCCTGCAA 60.682 55.000 3.32 0.00 0.00 4.08
86 87 0.454600 CTCATGTGATGGCCTGCAAC 59.545 55.000 3.32 0.00 0.00 4.17
87 88 0.966875 TCATGTGATGGCCTGCAACC 60.967 55.000 3.32 0.00 0.00 3.77
88 89 1.683365 ATGTGATGGCCTGCAACCC 60.683 57.895 3.32 0.00 0.00 4.11
89 90 3.070576 GTGATGGCCTGCAACCCC 61.071 66.667 3.32 0.00 0.00 4.95
90 91 4.380945 TGATGGCCTGCAACCCCC 62.381 66.667 3.32 0.00 0.00 5.40
100 101 4.770874 CAACCCCCGGCACCGTAG 62.771 72.222 8.49 0.00 37.81 3.51
105 106 4.789075 CCCGGCACCGTAGTCGTG 62.789 72.222 8.49 0.00 37.81 4.35
106 107 4.047059 CCGGCACCGTAGTCGTGT 62.047 66.667 8.49 0.00 37.81 4.49
107 108 2.503375 CGGCACCGTAGTCGTGTC 60.503 66.667 0.00 0.00 35.01 3.67
108 109 2.646719 GGCACCGTAGTCGTGTCA 59.353 61.111 0.00 0.00 35.01 3.58
109 110 1.214589 GGCACCGTAGTCGTGTCAT 59.785 57.895 0.00 0.00 35.01 3.06
110 111 1.076533 GGCACCGTAGTCGTGTCATG 61.077 60.000 0.00 0.00 35.01 3.07
111 112 1.076533 GCACCGTAGTCGTGTCATGG 61.077 60.000 0.00 0.00 35.01 3.66
112 113 0.242825 CACCGTAGTCGTGTCATGGT 59.757 55.000 0.00 0.00 35.01 3.55
113 114 0.242825 ACCGTAGTCGTGTCATGGTG 59.757 55.000 0.00 0.00 35.01 4.17
114 115 0.524414 CCGTAGTCGTGTCATGGTGA 59.476 55.000 0.00 0.00 35.01 4.02
115 116 1.068125 CCGTAGTCGTGTCATGGTGAA 60.068 52.381 0.00 0.00 35.01 3.18
116 117 1.983605 CGTAGTCGTGTCATGGTGAAC 59.016 52.381 0.00 0.00 0.00 3.18
117 118 1.983605 GTAGTCGTGTCATGGTGAACG 59.016 52.381 0.00 0.00 34.58 3.95
118 119 0.387929 AGTCGTGTCATGGTGAACGT 59.612 50.000 0.00 0.00 34.74 3.99
119 120 0.506932 GTCGTGTCATGGTGAACGTG 59.493 55.000 0.00 0.00 34.74 4.49
120 121 0.386113 TCGTGTCATGGTGAACGTGA 59.614 50.000 0.00 0.00 42.69 4.35
124 125 3.906660 TCATGGTGAACGTGACCTC 57.093 52.632 15.97 0.00 40.12 3.85
125 126 0.320374 TCATGGTGAACGTGACCTCC 59.680 55.000 15.97 7.53 40.12 4.30
126 127 1.014044 CATGGTGAACGTGACCTCCG 61.014 60.000 15.97 3.51 38.41 4.63
127 128 1.183030 ATGGTGAACGTGACCTCCGA 61.183 55.000 15.97 0.00 34.26 4.55
128 129 1.372623 GGTGAACGTGACCTCCGAC 60.373 63.158 9.32 0.00 0.00 4.79
129 130 1.372623 GTGAACGTGACCTCCGACC 60.373 63.158 0.00 0.00 0.00 4.79
130 131 1.829096 TGAACGTGACCTCCGACCA 60.829 57.895 0.00 0.00 0.00 4.02
131 132 1.183030 TGAACGTGACCTCCGACCAT 61.183 55.000 0.00 0.00 0.00 3.55
132 133 0.736325 GAACGTGACCTCCGACCATG 60.736 60.000 0.00 0.00 0.00 3.66
133 134 1.183030 AACGTGACCTCCGACCATGA 61.183 55.000 0.00 0.00 0.00 3.07
134 135 1.153823 CGTGACCTCCGACCATGAC 60.154 63.158 0.00 0.00 0.00 3.06
135 136 1.153823 GTGACCTCCGACCATGACG 60.154 63.158 0.00 0.00 0.00 4.35
141 142 2.885644 CCGACCATGACGGCTTCG 60.886 66.667 15.76 0.00 43.74 3.79
150 151 2.355481 ACGGCTTCGTTGTCGACC 60.355 61.111 14.12 0.00 45.87 4.79
151 152 2.049433 CGGCTTCGTTGTCGACCT 60.049 61.111 14.12 0.00 46.03 3.85
152 153 2.087009 CGGCTTCGTTGTCGACCTC 61.087 63.158 14.12 5.06 46.03 3.85
153 154 1.006571 GGCTTCGTTGTCGACCTCA 60.007 57.895 14.12 0.00 46.03 3.86
154 155 1.282930 GGCTTCGTTGTCGACCTCAC 61.283 60.000 14.12 6.34 46.03 3.51
155 156 1.606350 GCTTCGTTGTCGACCTCACG 61.606 60.000 20.18 20.18 46.03 4.35
156 157 0.317603 CTTCGTTGTCGACCTCACGT 60.318 55.000 23.29 0.00 46.03 4.49
157 158 0.101040 TTCGTTGTCGACCTCACGTT 59.899 50.000 23.29 0.00 46.03 3.99
158 159 0.593008 TCGTTGTCGACCTCACGTTG 60.593 55.000 23.29 4.95 41.35 4.10
159 160 0.593008 CGTTGTCGACCTCACGTTGA 60.593 55.000 14.12 0.00 39.71 3.18
163 164 2.710440 TCGACCTCACGTTGACTGA 58.290 52.632 0.00 0.00 29.18 3.41
164 165 0.309922 TCGACCTCACGTTGACTGAC 59.690 55.000 0.00 0.00 29.18 3.51
165 166 0.030235 CGACCTCACGTTGACTGACA 59.970 55.000 0.00 0.00 0.00 3.58
166 167 1.488527 GACCTCACGTTGACTGACAC 58.511 55.000 0.00 0.00 0.00 3.67
167 168 1.067212 GACCTCACGTTGACTGACACT 59.933 52.381 0.00 0.00 0.00 3.55
168 169 1.202417 ACCTCACGTTGACTGACACTG 60.202 52.381 0.00 0.00 0.00 3.66
169 170 1.202417 CCTCACGTTGACTGACACTGT 60.202 52.381 0.00 0.00 0.00 3.55
170 171 2.120232 CTCACGTTGACTGACACTGTC 58.880 52.381 1.86 1.86 33.83 3.51
171 172 1.474879 TCACGTTGACTGACACTGTCA 59.525 47.619 11.44 11.44 40.50 3.58
172 173 2.094442 TCACGTTGACTGACACTGTCAA 60.094 45.455 12.92 16.07 45.25 3.18
173 174 2.282555 CACGTTGACTGACACTGTCAAG 59.717 50.000 18.96 15.71 46.92 3.02
174 175 1.860950 CGTTGACTGACACTGTCAAGG 59.139 52.381 18.96 19.66 46.92 3.61
175 176 1.599542 GTTGACTGACACTGTCAAGGC 59.400 52.381 18.96 9.71 46.92 4.35
176 177 1.123077 TGACTGACACTGTCAAGGCT 58.877 50.000 12.92 0.00 42.26 4.58
177 178 1.069204 TGACTGACACTGTCAAGGCTC 59.931 52.381 12.92 6.21 42.26 4.70
178 179 0.394565 ACTGACACTGTCAAGGCTCC 59.605 55.000 12.92 0.00 42.26 4.70
179 180 0.394192 CTGACACTGTCAAGGCTCCA 59.606 55.000 12.92 0.00 42.26 3.86
180 181 0.394192 TGACACTGTCAAGGCTCCAG 59.606 55.000 9.54 7.11 39.78 3.86
181 182 0.681733 GACACTGTCAAGGCTCCAGA 59.318 55.000 13.66 0.00 32.09 3.86
182 183 0.394565 ACACTGTCAAGGCTCCAGAC 59.605 55.000 13.66 10.62 0.00 3.51
183 184 0.683973 CACTGTCAAGGCTCCAGACT 59.316 55.000 13.66 0.00 33.56 3.24
184 185 0.972883 ACTGTCAAGGCTCCAGACTC 59.027 55.000 13.66 0.00 33.56 3.36
185 186 0.248843 CTGTCAAGGCTCCAGACTCC 59.751 60.000 13.50 0.00 33.56 3.85
186 187 1.216710 GTCAAGGCTCCAGACTCCG 59.783 63.158 7.26 0.00 29.30 4.63
187 188 1.076727 TCAAGGCTCCAGACTCCGA 59.923 57.895 0.00 0.00 29.30 4.55
188 189 1.216710 CAAGGCTCCAGACTCCGAC 59.783 63.158 0.00 0.00 29.30 4.79
189 190 1.228894 AAGGCTCCAGACTCCGACA 60.229 57.895 0.00 0.00 29.30 4.35
190 191 0.832135 AAGGCTCCAGACTCCGACAA 60.832 55.000 0.00 0.00 29.30 3.18
191 192 1.216710 GGCTCCAGACTCCGACAAG 59.783 63.158 0.00 0.00 0.00 3.16
192 193 1.216710 GCTCCAGACTCCGACAAGG 59.783 63.158 0.00 0.00 42.97 3.61
203 204 2.011540 CCGACAAGGAAGAGTAAGGC 57.988 55.000 0.00 0.00 45.00 4.35
204 205 1.275291 CCGACAAGGAAGAGTAAGGCA 59.725 52.381 0.00 0.00 45.00 4.75
205 206 2.093447 CCGACAAGGAAGAGTAAGGCAT 60.093 50.000 0.00 0.00 45.00 4.40
206 207 2.932614 CGACAAGGAAGAGTAAGGCATG 59.067 50.000 0.00 0.00 0.00 4.06
207 208 3.274288 GACAAGGAAGAGTAAGGCATGG 58.726 50.000 0.00 0.00 0.00 3.66
208 209 2.912956 ACAAGGAAGAGTAAGGCATGGA 59.087 45.455 0.00 0.00 0.00 3.41
209 210 3.330701 ACAAGGAAGAGTAAGGCATGGAA 59.669 43.478 0.00 0.00 0.00 3.53
210 211 3.922171 AGGAAGAGTAAGGCATGGAAG 57.078 47.619 0.00 0.00 0.00 3.46
211 212 3.454858 AGGAAGAGTAAGGCATGGAAGA 58.545 45.455 0.00 0.00 0.00 2.87
212 213 3.198853 AGGAAGAGTAAGGCATGGAAGAC 59.801 47.826 0.00 0.00 0.00 3.01
213 214 2.969628 AGAGTAAGGCATGGAAGACG 57.030 50.000 0.00 0.00 0.00 4.18
214 215 1.482593 AGAGTAAGGCATGGAAGACGG 59.517 52.381 0.00 0.00 0.00 4.79
215 216 1.207329 GAGTAAGGCATGGAAGACGGT 59.793 52.381 0.00 0.00 0.00 4.83
216 217 1.066143 AGTAAGGCATGGAAGACGGTG 60.066 52.381 0.00 0.00 0.00 4.94
217 218 1.066430 GTAAGGCATGGAAGACGGTGA 60.066 52.381 0.00 0.00 0.00 4.02
218 219 0.321653 AAGGCATGGAAGACGGTGAC 60.322 55.000 0.00 0.00 0.00 3.67
219 220 1.194781 AGGCATGGAAGACGGTGACT 61.195 55.000 0.00 0.00 0.00 3.41
220 221 0.741221 GGCATGGAAGACGGTGACTC 60.741 60.000 0.00 0.00 0.00 3.36
221 222 0.741221 GCATGGAAGACGGTGACTCC 60.741 60.000 0.00 0.00 0.00 3.85
222 223 0.898320 CATGGAAGACGGTGACTCCT 59.102 55.000 0.00 0.00 0.00 3.69
223 224 1.276421 CATGGAAGACGGTGACTCCTT 59.724 52.381 0.00 0.00 0.00 3.36
224 225 0.679505 TGGAAGACGGTGACTCCTTG 59.320 55.000 0.00 0.00 0.00 3.61
225 226 0.966920 GGAAGACGGTGACTCCTTGA 59.033 55.000 0.00 0.00 0.00 3.02
226 227 1.067495 GGAAGACGGTGACTCCTTGAG 60.067 57.143 0.00 0.00 35.52 3.02
227 228 1.614413 GAAGACGGTGACTCCTTGAGT 59.386 52.381 0.00 0.00 46.42 3.41
237 238 3.674528 ACTCCTTGAGTCATGTGAGTG 57.325 47.619 19.90 5.76 38.71 3.51
238 239 2.301296 ACTCCTTGAGTCATGTGAGTGG 59.699 50.000 19.90 6.21 38.71 4.00
239 240 2.301296 CTCCTTGAGTCATGTGAGTGGT 59.699 50.000 0.00 0.00 0.00 4.16
240 241 2.037641 TCCTTGAGTCATGTGAGTGGTG 59.962 50.000 0.00 0.00 0.00 4.17
241 242 1.802960 CTTGAGTCATGTGAGTGGTGC 59.197 52.381 0.00 0.00 0.00 5.01
242 243 0.319813 TGAGTCATGTGAGTGGTGCG 60.320 55.000 0.00 0.00 0.00 5.34
243 244 0.319900 GAGTCATGTGAGTGGTGCGT 60.320 55.000 0.00 0.00 0.00 5.24
244 245 0.601046 AGTCATGTGAGTGGTGCGTG 60.601 55.000 0.00 0.00 0.00 5.34
245 246 0.880278 GTCATGTGAGTGGTGCGTGT 60.880 55.000 0.00 0.00 0.00 4.49
246 247 0.599991 TCATGTGAGTGGTGCGTGTC 60.600 55.000 0.00 0.00 0.00 3.67
247 248 0.879839 CATGTGAGTGGTGCGTGTCA 60.880 55.000 0.00 0.00 0.00 3.58
248 249 0.880278 ATGTGAGTGGTGCGTGTCAC 60.880 55.000 0.00 0.00 44.90 3.67
258 259 3.438297 GTGCGTGTCACATATCCTACT 57.562 47.619 3.42 0.00 44.98 2.57
259 260 3.372954 GTGCGTGTCACATATCCTACTC 58.627 50.000 3.42 0.00 44.98 2.59
260 261 3.066900 GTGCGTGTCACATATCCTACTCT 59.933 47.826 3.42 0.00 44.98 3.24
261 262 3.066760 TGCGTGTCACATATCCTACTCTG 59.933 47.826 3.42 0.00 0.00 3.35
262 263 3.315470 GCGTGTCACATATCCTACTCTGA 59.685 47.826 3.42 0.00 0.00 3.27
263 264 4.022762 GCGTGTCACATATCCTACTCTGAT 60.023 45.833 3.42 0.00 0.00 2.90
264 265 5.456265 CGTGTCACATATCCTACTCTGATG 58.544 45.833 3.42 0.00 0.00 3.07
265 266 5.239525 CGTGTCACATATCCTACTCTGATGA 59.760 44.000 3.42 0.00 0.00 2.92
266 267 6.442952 GTGTCACATATCCTACTCTGATGAC 58.557 44.000 0.00 0.00 0.00 3.06
267 268 5.536538 TGTCACATATCCTACTCTGATGACC 59.463 44.000 0.00 0.00 0.00 4.02
268 269 4.762251 TCACATATCCTACTCTGATGACCG 59.238 45.833 0.00 0.00 0.00 4.79
269 270 4.082517 CACATATCCTACTCTGATGACCGG 60.083 50.000 0.00 0.00 0.00 5.28
270 271 4.202577 ACATATCCTACTCTGATGACCGGA 60.203 45.833 9.46 0.00 0.00 5.14
275 276 3.056628 CTCTGATGACCGGAGCAAC 57.943 57.895 9.46 5.36 41.04 4.17
276 277 0.247460 CTCTGATGACCGGAGCAACA 59.753 55.000 9.46 10.11 41.04 3.33
277 278 0.037326 TCTGATGACCGGAGCAACAC 60.037 55.000 9.46 3.23 0.00 3.32
278 279 0.036952 CTGATGACCGGAGCAACACT 60.037 55.000 9.46 0.00 0.00 3.55
279 280 0.396435 TGATGACCGGAGCAACACTT 59.604 50.000 9.46 0.00 0.00 3.16
280 281 1.202758 TGATGACCGGAGCAACACTTT 60.203 47.619 9.46 0.00 0.00 2.66
281 282 1.197721 GATGACCGGAGCAACACTTTG 59.802 52.381 9.46 0.00 35.62 2.77
282 283 0.179234 TGACCGGAGCAACACTTTGA 59.821 50.000 9.46 0.00 34.24 2.69
283 284 0.868406 GACCGGAGCAACACTTTGAG 59.132 55.000 9.46 0.00 34.24 3.02
284 285 0.535102 ACCGGAGCAACACTTTGAGG 60.535 55.000 9.46 0.00 34.24 3.86
285 286 1.237285 CCGGAGCAACACTTTGAGGG 61.237 60.000 0.00 0.00 34.24 4.30
286 287 1.237285 CGGAGCAACACTTTGAGGGG 61.237 60.000 0.00 0.00 34.24 4.79
287 288 1.527433 GGAGCAACACTTTGAGGGGC 61.527 60.000 0.00 0.00 34.24 5.80
288 289 1.856265 GAGCAACACTTTGAGGGGCG 61.856 60.000 0.00 0.00 34.24 6.13
289 290 2.644992 CAACACTTTGAGGGGCGC 59.355 61.111 0.00 0.00 34.24 6.53
290 291 2.192861 CAACACTTTGAGGGGCGCA 61.193 57.895 10.83 0.00 34.24 6.09
291 292 1.454847 AACACTTTGAGGGGCGCAA 60.455 52.632 10.83 0.00 0.00 4.85
292 293 1.734388 AACACTTTGAGGGGCGCAAC 61.734 55.000 10.83 0.00 0.00 4.17
293 294 2.597510 ACTTTGAGGGGCGCAACC 60.598 61.111 10.83 11.52 37.93 3.77
294 295 2.597217 CTTTGAGGGGCGCAACCA 60.597 61.111 20.55 5.15 42.05 3.67
295 296 2.597217 TTTGAGGGGCGCAACCAG 60.597 61.111 20.55 0.00 42.05 4.00
305 306 4.947147 GCAACCAGCCACCGGACA 62.947 66.667 9.46 0.00 37.23 4.02
306 307 2.034066 CAACCAGCCACCGGACAT 59.966 61.111 9.46 0.00 0.00 3.06
307 308 2.034066 AACCAGCCACCGGACATG 59.966 61.111 9.46 0.00 0.00 3.21
308 309 3.567579 AACCAGCCACCGGACATGG 62.568 63.158 9.46 13.28 40.50 3.66
309 310 3.716195 CCAGCCACCGGACATGGA 61.716 66.667 9.46 0.00 39.87 3.41
310 311 2.436646 CAGCCACCGGACATGGAC 60.437 66.667 9.46 2.01 39.87 4.02
311 312 2.927856 AGCCACCGGACATGGACA 60.928 61.111 9.46 0.00 39.87 4.02
312 313 2.272146 GCCACCGGACATGGACAT 59.728 61.111 9.46 0.00 39.87 3.06
313 314 2.114670 GCCACCGGACATGGACATG 61.115 63.158 9.46 10.57 44.15 3.21
314 315 1.451927 CCACCGGACATGGACATGG 60.452 63.158 9.46 0.00 42.91 3.66
315 316 2.114670 CACCGGACATGGACATGGC 61.115 63.158 9.46 13.04 46.06 4.40
320 321 3.727419 GACATGGACATGGCAAAGC 57.273 52.632 13.09 0.00 46.06 3.51
331 332 3.491652 GCAAAGCCGGACGAGCTC 61.492 66.667 5.05 2.73 40.49 4.09
332 333 2.815647 CAAAGCCGGACGAGCTCC 60.816 66.667 5.05 0.00 40.49 4.70
344 345 1.571919 CGAGCTCCGTTTAGATTGGG 58.428 55.000 8.47 0.00 0.00 4.12
345 346 1.134788 CGAGCTCCGTTTAGATTGGGT 60.135 52.381 8.47 0.00 0.00 4.51
346 347 2.677037 CGAGCTCCGTTTAGATTGGGTT 60.677 50.000 8.47 0.00 0.00 4.11
347 348 3.344515 GAGCTCCGTTTAGATTGGGTTT 58.655 45.455 0.87 0.00 0.00 3.27
348 349 3.756963 GAGCTCCGTTTAGATTGGGTTTT 59.243 43.478 0.87 0.00 0.00 2.43
349 350 4.913784 AGCTCCGTTTAGATTGGGTTTTA 58.086 39.130 0.00 0.00 0.00 1.52
350 351 4.698780 AGCTCCGTTTAGATTGGGTTTTAC 59.301 41.667 0.00 0.00 0.00 2.01
351 352 4.456566 GCTCCGTTTAGATTGGGTTTTACA 59.543 41.667 0.00 0.00 0.00 2.41
352 353 5.124936 GCTCCGTTTAGATTGGGTTTTACAT 59.875 40.000 0.00 0.00 0.00 2.29
353 354 6.349860 GCTCCGTTTAGATTGGGTTTTACATT 60.350 38.462 0.00 0.00 0.00 2.71
354 355 6.915349 TCCGTTTAGATTGGGTTTTACATTG 58.085 36.000 0.00 0.00 0.00 2.82
355 356 5.575218 CCGTTTAGATTGGGTTTTACATTGC 59.425 40.000 0.00 0.00 0.00 3.56
356 357 6.153067 CGTTTAGATTGGGTTTTACATTGCA 58.847 36.000 0.00 0.00 0.00 4.08
357 358 6.811170 CGTTTAGATTGGGTTTTACATTGCAT 59.189 34.615 0.00 0.00 0.00 3.96
358 359 7.201427 CGTTTAGATTGGGTTTTACATTGCATG 60.201 37.037 0.00 0.00 0.00 4.06
359 360 5.743636 AGATTGGGTTTTACATTGCATGT 57.256 34.783 6.93 6.93 46.92 3.21
360 361 6.849085 AGATTGGGTTTTACATTGCATGTA 57.151 33.333 0.00 0.00 44.38 2.29
369 370 2.459644 ACATTGCATGTAAGGGCATGT 58.540 42.857 12.73 3.75 45.75 3.21
370 371 3.630168 ACATTGCATGTAAGGGCATGTA 58.370 40.909 12.73 0.95 45.75 2.29
371 372 3.381272 ACATTGCATGTAAGGGCATGTAC 59.619 43.478 12.73 0.00 45.75 2.90
372 373 2.797177 TGCATGTAAGGGCATGTACA 57.203 45.000 0.00 0.00 45.75 2.90
373 374 3.078891 TGCATGTAAGGGCATGTACAA 57.921 42.857 0.00 0.00 45.75 2.41
374 375 3.630168 TGCATGTAAGGGCATGTACAAT 58.370 40.909 0.00 0.00 45.75 2.71
375 376 3.380954 TGCATGTAAGGGCATGTACAATG 59.619 43.478 0.00 0.12 45.75 2.82
376 377 3.243501 GCATGTAAGGGCATGTACAATGG 60.244 47.826 0.00 0.00 45.75 3.16
377 378 3.730215 TGTAAGGGCATGTACAATGGT 57.270 42.857 0.00 0.00 0.00 3.55
378 379 4.040936 TGTAAGGGCATGTACAATGGTT 57.959 40.909 0.00 0.00 0.00 3.67
379 380 4.411927 TGTAAGGGCATGTACAATGGTTT 58.588 39.130 0.00 0.00 0.00 3.27
380 381 5.571285 TGTAAGGGCATGTACAATGGTTTA 58.429 37.500 0.00 0.00 0.00 2.01
381 382 6.191315 TGTAAGGGCATGTACAATGGTTTAT 58.809 36.000 0.00 0.00 0.00 1.40
382 383 7.347252 TGTAAGGGCATGTACAATGGTTTATA 58.653 34.615 0.00 0.00 0.00 0.98
383 384 7.834681 TGTAAGGGCATGTACAATGGTTTATAA 59.165 33.333 0.00 0.00 0.00 0.98
384 385 6.959639 AGGGCATGTACAATGGTTTATAAG 57.040 37.500 0.00 0.00 0.00 1.73
385 386 6.668645 AGGGCATGTACAATGGTTTATAAGA 58.331 36.000 0.00 0.00 0.00 2.10
386 387 7.297614 AGGGCATGTACAATGGTTTATAAGAT 58.702 34.615 0.00 0.00 0.00 2.40
387 388 8.444783 AGGGCATGTACAATGGTTTATAAGATA 58.555 33.333 0.00 0.00 0.00 1.98
388 389 8.730680 GGGCATGTACAATGGTTTATAAGATAG 58.269 37.037 0.00 0.00 0.00 2.08
389 390 9.284968 GGCATGTACAATGGTTTATAAGATAGT 57.715 33.333 0.00 0.00 0.00 2.12
408 409 9.979578 AAGATAGTCTTATCTAAAGTCTGCATG 57.020 33.333 0.00 0.00 44.11 4.06
409 410 9.142014 AGATAGTCTTATCTAAAGTCTGCATGT 57.858 33.333 0.00 0.00 43.29 3.21
424 425 9.890629 AAGTCTGCATGTAATTTAGAGATAACA 57.109 29.630 0.00 0.00 0.00 2.41
425 426 9.890629 AGTCTGCATGTAATTTAGAGATAACAA 57.109 29.630 0.00 0.00 0.00 2.83
452 453 8.814038 AAAATATGTCTATAATGGGCCATCTC 57.186 34.615 21.48 7.44 0.00 2.75
453 454 7.761981 AATATGTCTATAATGGGCCATCTCT 57.238 36.000 21.48 6.99 0.00 3.10
454 455 7.761981 ATATGTCTATAATGGGCCATCTCTT 57.238 36.000 21.48 7.48 0.00 2.85
455 456 8.860517 ATATGTCTATAATGGGCCATCTCTTA 57.139 34.615 21.48 9.76 0.00 2.10
456 457 6.611613 TGTCTATAATGGGCCATCTCTTAG 57.388 41.667 21.48 16.78 0.00 2.18
457 458 5.046304 TGTCTATAATGGGCCATCTCTTAGC 60.046 44.000 21.48 13.31 0.00 3.09
458 459 3.728385 ATAATGGGCCATCTCTTAGCC 57.272 47.619 21.48 0.00 46.37 3.93
459 460 1.527457 AATGGGCCATCTCTTAGCCT 58.473 50.000 21.48 0.00 46.31 4.58
460 461 1.527457 ATGGGCCATCTCTTAGCCTT 58.473 50.000 14.78 0.00 46.31 4.35
461 462 2.190398 TGGGCCATCTCTTAGCCTTA 57.810 50.000 0.00 0.00 46.31 2.69
462 463 2.706350 TGGGCCATCTCTTAGCCTTAT 58.294 47.619 0.00 0.00 46.31 1.73
463 464 2.639839 TGGGCCATCTCTTAGCCTTATC 59.360 50.000 0.00 0.00 46.31 1.75
464 465 2.909662 GGGCCATCTCTTAGCCTTATCT 59.090 50.000 4.39 0.00 46.31 1.98
465 466 3.329225 GGGCCATCTCTTAGCCTTATCTT 59.671 47.826 4.39 0.00 46.31 2.40
466 467 4.564613 GGGCCATCTCTTAGCCTTATCTTC 60.565 50.000 4.39 0.00 46.31 2.87
467 468 4.040952 GGCCATCTCTTAGCCTTATCTTCA 59.959 45.833 0.00 0.00 43.62 3.02
468 469 5.455326 GGCCATCTCTTAGCCTTATCTTCAA 60.455 44.000 0.00 0.00 43.62 2.69
469 470 6.237154 GCCATCTCTTAGCCTTATCTTCAAT 58.763 40.000 0.00 0.00 0.00 2.57
470 471 7.390027 GCCATCTCTTAGCCTTATCTTCAATA 58.610 38.462 0.00 0.00 0.00 1.90
471 472 7.880195 GCCATCTCTTAGCCTTATCTTCAATAA 59.120 37.037 0.00 0.00 0.00 1.40
472 473 9.213799 CCATCTCTTAGCCTTATCTTCAATAAC 57.786 37.037 0.00 0.00 0.00 1.89
473 474 9.995003 CATCTCTTAGCCTTATCTTCAATAACT 57.005 33.333 0.00 0.00 0.00 2.24
476 477 9.418045 CTCTTAGCCTTATCTTCAATAACTAGC 57.582 37.037 0.00 0.00 0.00 3.42
477 478 9.148879 TCTTAGCCTTATCTTCAATAACTAGCT 57.851 33.333 0.00 0.00 0.00 3.32
496 497 9.515226 AACTAGCTATTTCTAAAAACATGGTGA 57.485 29.630 0.00 0.00 0.00 4.02
497 498 9.167311 ACTAGCTATTTCTAAAAACATGGTGAG 57.833 33.333 0.00 0.00 0.00 3.51
498 499 9.383519 CTAGCTATTTCTAAAAACATGGTGAGA 57.616 33.333 0.00 0.00 0.00 3.27
499 500 8.045176 AGCTATTTCTAAAAACATGGTGAGAC 57.955 34.615 0.00 0.00 0.00 3.36
500 501 7.665559 AGCTATTTCTAAAAACATGGTGAGACA 59.334 33.333 0.00 0.00 0.00 3.41
501 502 8.462016 GCTATTTCTAAAAACATGGTGAGACAT 58.538 33.333 0.00 0.00 0.00 3.06
509 510 8.931385 AAAAACATGGTGAGACATATTTATGC 57.069 30.769 0.00 0.00 37.19 3.14
510 511 7.886629 AAACATGGTGAGACATATTTATGCT 57.113 32.000 0.00 0.00 37.19 3.79
511 512 8.978874 AAACATGGTGAGACATATTTATGCTA 57.021 30.769 0.00 0.00 37.19 3.49
512 513 8.978874 AACATGGTGAGACATATTTATGCTAA 57.021 30.769 0.00 0.00 37.19 3.09
513 514 8.613060 ACATGGTGAGACATATTTATGCTAAG 57.387 34.615 0.00 0.00 37.19 2.18
514 515 8.432013 ACATGGTGAGACATATTTATGCTAAGA 58.568 33.333 0.00 0.00 37.19 2.10
515 516 8.933807 CATGGTGAGACATATTTATGCTAAGAG 58.066 37.037 0.00 0.00 37.19 2.85
516 517 8.250143 TGGTGAGACATATTTATGCTAAGAGA 57.750 34.615 0.00 0.00 37.19 3.10
517 518 8.874156 TGGTGAGACATATTTATGCTAAGAGAT 58.126 33.333 0.00 0.00 37.19 2.75
518 519 9.364989 GGTGAGACATATTTATGCTAAGAGATC 57.635 37.037 0.00 0.00 37.19 2.75
519 520 9.920133 GTGAGACATATTTATGCTAAGAGATCA 57.080 33.333 0.00 0.00 37.19 2.92
538 539 8.994429 GAGATCATCTCTTGTCTTGTCTTAAA 57.006 34.615 7.48 0.00 40.30 1.52
539 540 9.598517 GAGATCATCTCTTGTCTTGTCTTAAAT 57.401 33.333 7.48 0.00 40.30 1.40
556 557 8.554835 GTCTTAAATAAGAGAAGACAAGCCTT 57.445 34.615 8.70 0.00 45.49 4.35
557 558 9.004717 GTCTTAAATAAGAGAAGACAAGCCTTT 57.995 33.333 8.70 0.00 45.49 3.11
558 559 9.574516 TCTTAAATAAGAGAAGACAAGCCTTTT 57.425 29.630 0.00 0.00 37.40 2.27
559 560 9.833182 CTTAAATAAGAGAAGACAAGCCTTTTC 57.167 33.333 0.00 0.00 35.33 2.29
560 561 9.574516 TTAAATAAGAGAAGACAAGCCTTTTCT 57.425 29.630 0.00 0.00 38.69 2.52
561 562 8.470657 AAATAAGAGAAGACAAGCCTTTTCTT 57.529 30.769 5.57 5.57 44.56 2.52
562 563 9.574516 AAATAAGAGAAGACAAGCCTTTTCTTA 57.425 29.630 5.86 14.67 45.53 2.10
564 565 7.446001 AAGAGAAGACAAGCCTTTTCTTATG 57.554 36.000 5.29 0.00 42.29 1.90
565 566 6.773638 AGAGAAGACAAGCCTTTTCTTATGA 58.226 36.000 5.29 0.00 35.01 2.15
566 567 7.401246 AGAGAAGACAAGCCTTTTCTTATGAT 58.599 34.615 5.29 0.00 35.01 2.45
567 568 7.887495 AGAGAAGACAAGCCTTTTCTTATGATT 59.113 33.333 5.29 0.00 35.01 2.57
568 569 8.414629 AGAAGACAAGCCTTTTCTTATGATTT 57.585 30.769 5.86 0.00 29.54 2.17
569 570 8.518702 AGAAGACAAGCCTTTTCTTATGATTTC 58.481 33.333 5.86 0.00 29.54 2.17
570 571 8.414629 AAGACAAGCCTTTTCTTATGATTTCT 57.585 30.769 4.07 0.00 0.00 2.52
571 572 9.520515 AAGACAAGCCTTTTCTTATGATTTCTA 57.479 29.630 4.07 0.00 0.00 2.10
572 573 9.692325 AGACAAGCCTTTTCTTATGATTTCTAT 57.308 29.630 0.00 0.00 0.00 1.98
578 579 9.534565 GCCTTTTCTTATGATTTCTATTTTCCC 57.465 33.333 0.00 0.00 0.00 3.97
584 585 9.799106 TCTTATGATTTCTATTTTCCCCATCTC 57.201 33.333 0.00 0.00 0.00 2.75
585 586 9.578576 CTTATGATTTCTATTTTCCCCATCTCA 57.421 33.333 0.00 0.00 0.00 3.27
598 599 9.807921 TTTTCCCCATCTCATAATTTATCCTAC 57.192 33.333 0.00 0.00 0.00 3.18
599 600 7.182817 TCCCCATCTCATAATTTATCCTACG 57.817 40.000 0.00 0.00 0.00 3.51
600 601 6.729100 TCCCCATCTCATAATTTATCCTACGT 59.271 38.462 0.00 0.00 0.00 3.57
601 602 6.818644 CCCCATCTCATAATTTATCCTACGTG 59.181 42.308 0.00 0.00 0.00 4.49
602 603 7.310423 CCCCATCTCATAATTTATCCTACGTGA 60.310 40.741 0.00 0.00 0.00 4.35
603 604 7.545965 CCCATCTCATAATTTATCCTACGTGAC 59.454 40.741 0.00 0.00 0.00 3.67
604 605 8.088365 CCATCTCATAATTTATCCTACGTGACA 58.912 37.037 0.00 0.00 0.00 3.58
605 606 9.645059 CATCTCATAATTTATCCTACGTGACAT 57.355 33.333 0.00 0.00 0.00 3.06
607 608 9.476202 TCTCATAATTTATCCTACGTGACATTG 57.524 33.333 0.00 0.00 0.00 2.82
608 609 8.083462 TCATAATTTATCCTACGTGACATTGC 57.917 34.615 0.00 0.00 0.00 3.56
609 610 7.931407 TCATAATTTATCCTACGTGACATTGCT 59.069 33.333 0.00 0.00 0.00 3.91
610 611 9.203421 CATAATTTATCCTACGTGACATTGCTA 57.797 33.333 0.00 0.00 0.00 3.49
611 612 9.772973 ATAATTTATCCTACGTGACATTGCTAA 57.227 29.630 0.00 0.00 0.00 3.09
612 613 7.715265 ATTTATCCTACGTGACATTGCTAAG 57.285 36.000 0.00 0.00 0.00 2.18
613 614 6.459670 TTATCCTACGTGACATTGCTAAGA 57.540 37.500 0.00 0.00 0.00 2.10
614 615 5.537300 ATCCTACGTGACATTGCTAAGAT 57.463 39.130 0.00 0.00 0.00 2.40
615 616 6.650427 ATCCTACGTGACATTGCTAAGATA 57.350 37.500 0.00 0.00 0.00 1.98
616 617 6.073327 TCCTACGTGACATTGCTAAGATAG 57.927 41.667 0.00 0.00 0.00 2.08
617 618 5.826208 TCCTACGTGACATTGCTAAGATAGA 59.174 40.000 0.00 0.00 0.00 1.98
618 619 6.320418 TCCTACGTGACATTGCTAAGATAGAA 59.680 38.462 0.00 0.00 0.00 2.10
619 620 6.418226 CCTACGTGACATTGCTAAGATAGAAC 59.582 42.308 0.00 0.00 0.00 3.01
620 621 5.109903 ACGTGACATTGCTAAGATAGAACC 58.890 41.667 0.00 0.00 0.00 3.62
621 622 5.109210 CGTGACATTGCTAAGATAGAACCA 58.891 41.667 0.00 0.00 0.00 3.67
622 623 5.755375 CGTGACATTGCTAAGATAGAACCAT 59.245 40.000 0.00 0.00 0.00 3.55
623 624 6.258727 CGTGACATTGCTAAGATAGAACCATT 59.741 38.462 0.00 0.00 0.00 3.16
624 625 7.412853 GTGACATTGCTAAGATAGAACCATTG 58.587 38.462 0.00 0.00 0.00 2.82
625 626 7.066284 GTGACATTGCTAAGATAGAACCATTGT 59.934 37.037 0.00 0.00 0.00 2.71
626 627 8.264347 TGACATTGCTAAGATAGAACCATTGTA 58.736 33.333 0.00 0.00 0.00 2.41
627 628 8.438676 ACATTGCTAAGATAGAACCATTGTAC 57.561 34.615 0.00 0.00 0.00 2.90
628 629 8.046708 ACATTGCTAAGATAGAACCATTGTACA 58.953 33.333 0.00 0.00 0.00 2.90
629 630 9.060347 CATTGCTAAGATAGAACCATTGTACAT 57.940 33.333 0.00 0.00 0.00 2.29
630 631 8.437360 TTGCTAAGATAGAACCATTGTACATG 57.563 34.615 0.00 0.00 0.00 3.21
631 632 6.992123 TGCTAAGATAGAACCATTGTACATGG 59.008 38.462 17.62 17.62 44.54 3.66
632 633 6.073003 GCTAAGATAGAACCATTGTACATGGC 60.073 42.308 18.61 8.25 42.82 4.40
633 634 4.718961 AGATAGAACCATTGTACATGGCC 58.281 43.478 18.61 0.00 42.82 5.36
634 635 4.413520 AGATAGAACCATTGTACATGGCCT 59.586 41.667 18.61 17.33 42.82 5.19
635 636 5.606749 AGATAGAACCATTGTACATGGCCTA 59.393 40.000 18.61 18.37 42.82 3.93
647 648 2.238646 ACATGGCCTAACGGATTTGAGA 59.761 45.455 3.32 0.00 0.00 3.27
744 767 4.451900 GGGTTGAATGTGGTGTATCCTAG 58.548 47.826 0.00 0.00 37.07 3.02
762 785 1.004200 GTTTCTTTCCTCGGCGGGA 60.004 57.895 9.18 11.08 0.00 5.14
823 848 4.720090 TCTCGAGAGAAACGAACATGTAC 58.280 43.478 12.08 0.00 41.32 2.90
881 916 0.618968 GCTTCCCTCCTCTCCTTCCA 60.619 60.000 0.00 0.00 0.00 3.53
980 1015 1.340017 CGCCATCCCTTTTTCTCTCCA 60.340 52.381 0.00 0.00 0.00 3.86
1055 1090 1.202806 AGCATCTCTCCCTCTCTCTCG 60.203 57.143 0.00 0.00 0.00 4.04
1068 1107 1.738099 CTCTCGCCCAACGGAACAG 60.738 63.158 0.00 0.00 43.89 3.16
1075 1114 2.544359 CAACGGAACAGACGCACG 59.456 61.111 0.00 0.00 34.00 5.34
1136 1175 3.470709 CAACGAGTGGATCAATGGCTAT 58.529 45.455 0.00 0.00 0.00 2.97
1151 1190 1.346068 GGCTATCTGGAGGCGATTCTT 59.654 52.381 0.00 0.00 31.65 2.52
1301 1346 2.713863 TCAACCCCACAACGTACTTT 57.286 45.000 0.00 0.00 0.00 2.66
1319 1364 1.217916 TTGTGGAGGAGGTGGTGAAA 58.782 50.000 0.00 0.00 0.00 2.69
1344 1389 2.282251 ACGAGAGCGACCTCCACA 60.282 61.111 0.00 0.00 38.96 4.17
1503 1550 2.031420 TCTTGATCGTCTCGTGTTCGTT 60.031 45.455 0.00 0.00 38.33 3.85
1632 1680 0.102300 TCGTGGTGCGATCTGTATGG 59.898 55.000 0.00 0.00 45.68 2.74
1707 1757 1.202463 TGTTTCCAACGGCATGTTTGG 60.202 47.619 13.73 13.73 39.29 3.28
1787 1845 0.030638 GATCTCTCTGCGCCTCTGAC 59.969 60.000 4.18 0.00 0.00 3.51
1810 1868 4.559251 CGTTTCGAGAATTCAGTACTCTGG 59.441 45.833 8.44 0.00 41.59 3.86
1873 1939 5.659440 TTGGCCCTATGATGTTTTTCTTC 57.341 39.130 0.00 0.00 0.00 2.87
1876 1942 3.945285 GCCCTATGATGTTTTTCTTCGGA 59.055 43.478 0.00 0.00 0.00 4.55
1877 1943 4.035675 GCCCTATGATGTTTTTCTTCGGAG 59.964 45.833 0.00 0.00 0.00 4.63
1878 1944 5.428253 CCCTATGATGTTTTTCTTCGGAGA 58.572 41.667 0.00 0.00 0.00 3.71
1879 1945 6.058183 CCCTATGATGTTTTTCTTCGGAGAT 58.942 40.000 0.00 0.00 35.04 2.75
1881 1947 7.386299 CCCTATGATGTTTTTCTTCGGAGATAG 59.614 40.741 0.00 0.00 35.04 2.08
1888 1954 7.792032 TGTTTTTCTTCGGAGATAGGATGTAT 58.208 34.615 0.00 0.00 35.04 2.29
1889 1955 7.710907 TGTTTTTCTTCGGAGATAGGATGTATG 59.289 37.037 0.00 0.00 35.04 2.39
1906 1972 6.017605 GGATGTATGATTGCTGATCGTTTCTT 60.018 38.462 1.59 0.00 37.60 2.52
1917 1983 5.560760 GCTGATCGTTTCTTCACACAAATGA 60.561 40.000 0.00 0.00 33.20 2.57
1942 2008 6.292923 TGTGAAAAGAGAAAGGGAATTACGA 58.707 36.000 0.00 0.00 0.00 3.43
1981 2047 5.126061 CAGTAATGGCTGATAAGTTGGCTTT 59.874 40.000 0.00 0.00 38.70 3.51
2034 2100 0.807496 GGAAACTGCATCTGCCAGAC 59.193 55.000 0.00 0.00 41.18 3.51
2244 2313 6.928492 TCTGAACATTTTTATCCTTTTGGTGC 59.072 34.615 0.00 0.00 41.38 5.01
2456 2525 3.933332 GGAATTTCTCCGACCTTAGTGTG 59.067 47.826 0.00 0.00 33.37 3.82
2484 2553 4.096682 CGGACGAGAATAAGGAGAAGAAGT 59.903 45.833 0.00 0.00 0.00 3.01
2486 2555 5.808030 GGACGAGAATAAGGAGAAGAAGTTG 59.192 44.000 0.00 0.00 0.00 3.16
2678 2747 4.920640 ACTGGGTAGTGATTCAGATACG 57.079 45.455 0.00 0.00 35.34 3.06
2695 2764 2.598787 CGGGAGGGCAGGTAAACCA 61.599 63.158 1.26 0.00 38.89 3.67
2860 2936 2.479837 CTGTTTACTCGCCAAGTGTCA 58.520 47.619 0.00 0.00 39.11 3.58
2863 2939 3.064207 GTTTACTCGCCAAGTGTCATCA 58.936 45.455 0.00 0.00 39.11 3.07
3058 3134 0.744414 GAGCCCTTGCGCACATTCTA 60.744 55.000 11.12 0.00 44.33 2.10
3067 3143 2.810852 TGCGCACATTCTAAACATGTCA 59.189 40.909 5.66 0.00 32.25 3.58
3247 3323 2.224606 CAGATTATGATGCAAGGGCGT 58.775 47.619 0.00 0.00 45.35 5.68
3301 3377 0.758734 TCATGAGGCGTATTGAGGGG 59.241 55.000 0.00 0.00 0.00 4.79
3400 3476 3.159472 TGATGGCTTTGATGTCAAGCTT 58.841 40.909 0.00 0.00 37.15 3.74
3410 3486 4.454678 TGATGTCAAGCTTGAGAAAGTGT 58.545 39.130 29.13 12.71 37.98 3.55
3619 3696 6.758886 TGGTTTTTGTTTGTGCTAATTCGATT 59.241 30.769 0.00 0.00 0.00 3.34
3630 3707 6.127925 TGTGCTAATTCGATTTGCTTCTTGAT 60.128 34.615 2.86 0.00 40.76 2.57
3707 3784 7.660030 TGGAGATGGCGATAAAGATGATATA 57.340 36.000 0.00 0.00 0.00 0.86
3764 3841 1.151450 CTGGGCTGAGGTTGGTGTT 59.849 57.895 0.00 0.00 0.00 3.32
3864 3941 4.107051 GTGCCACAGGTGATGCGC 62.107 66.667 0.00 0.00 0.00 6.09
4000 4077 7.762382 ACTTGCAAACTTAGTAAGCAATATCC 58.238 34.615 19.46 0.00 43.34 2.59
4215 4293 2.766345 TTGGAAAATGCTGCCCATTC 57.234 45.000 0.00 0.00 43.22 2.67
4312 4390 4.844349 TTAGGAACTGGATGAAAGGAGG 57.156 45.455 0.00 0.00 41.52 4.30
4321 4400 3.009473 TGGATGAAAGGAGGACCAGAAAG 59.991 47.826 0.00 0.00 38.94 2.62
4477 4556 6.051717 GCTGGTTGACAAGTATGATCTGTAT 58.948 40.000 0.00 0.00 0.00 2.29
4581 4660 7.538575 GGTTGCATGTTATATTCAGTTGTTCT 58.461 34.615 0.00 0.00 0.00 3.01
4619 4698 4.628766 TCAGCATCTCATTCTGACGAAAAG 59.371 41.667 0.00 0.00 32.48 2.27
4695 4774 2.159142 CGGCCTTACACTAATCGAGGTT 60.159 50.000 0.00 0.00 0.00 3.50
4730 4815 6.820152 TCCAGTTATCTGACAATGTCAATCAG 59.180 38.462 17.41 5.81 42.26 2.90
4740 4825 5.955790 GACAATGTCAATCAGCTGATGCTTC 60.956 44.000 29.34 18.86 38.88 3.86
4748 4833 3.566130 GCTGATGCTTCCCTGTTCT 57.434 52.632 0.00 0.00 36.03 3.01
4758 4843 5.630121 TGCTTCCCTGTTCTCATAGAAAAA 58.370 37.500 0.00 0.00 35.75 1.94
4879 4964 6.275335 ACATTACAAATGTAAGCATGCATCC 58.725 36.000 21.98 7.01 42.94 3.51
5166 5251 2.609299 TGCCGGATCAGGAACCCA 60.609 61.111 16.86 0.74 0.00 4.51
5427 5512 0.533308 GCACCGTCAACAAGTACCCA 60.533 55.000 0.00 0.00 0.00 4.51
5481 5566 0.460284 CCGTGGACTGCTATGGTGAC 60.460 60.000 0.00 0.00 0.00 3.67
5517 5602 4.778534 CAAGAAGATGTTGCAGGTGATT 57.221 40.909 0.00 0.00 0.00 2.57
5568 5653 3.019564 CACCCAATTGTCCAAGATCTCC 58.980 50.000 4.43 0.00 0.00 3.71
5577 5662 1.218047 CAAGATCTCCGGGTTCGCA 59.782 57.895 0.00 0.00 34.56 5.10
5652 5737 1.196104 TTCCCCCAACCGACTTCGAT 61.196 55.000 0.00 0.00 43.02 3.59
5697 5782 2.209475 GGTGTACTACCCTGGCTCC 58.791 63.158 0.00 0.00 44.15 4.70
5763 5848 0.251474 ACCTGCAGCACATCAACCAT 60.251 50.000 8.66 0.00 0.00 3.55
6066 6151 0.324943 GGTGCCACCTCATGTACTGT 59.675 55.000 6.63 0.00 34.73 3.55
6072 6157 2.417379 CCACCTCATGTACTGTCGGAAG 60.417 54.545 0.00 0.00 0.00 3.46
6156 6241 3.543494 CGCATTGTTTTATTGAGCGAAGG 59.457 43.478 0.00 0.00 45.78 3.46
6252 6348 8.855110 TCTTTACTCTGTTCCATAATGCAAAAA 58.145 29.630 0.00 0.00 0.00 1.94
6261 6357 6.899393 TCCATAATGCAAAAACAGAACTCT 57.101 33.333 0.00 0.00 0.00 3.24
6400 6497 1.000955 CTCAGGTACCTCTTTGTGCGT 59.999 52.381 12.84 0.00 0.00 5.24
6428 6525 1.302913 CCCGTGGGCAACATGTACA 60.303 57.895 0.00 0.00 34.14 2.90
6496 6593 2.897969 AGGACTACACAAGACGGTGATT 59.102 45.455 7.21 0.00 41.32 2.57
6499 6596 4.056050 GACTACACAAGACGGTGATTGTT 58.944 43.478 7.21 2.50 41.32 2.83
6523 6620 1.289066 CGTCACCGAGAAAGGCTCA 59.711 57.895 0.00 0.00 44.15 4.26
6568 6665 3.493873 GGAGTTACCACAAGGAAGACGTT 60.494 47.826 0.00 0.00 38.69 3.99
6619 6716 2.508891 GCGCGGTGATCTGAAGTCG 61.509 63.158 8.83 0.00 0.00 4.18
6752 6849 5.877012 TCTGCTTGTTCATAACCAGAGATTC 59.123 40.000 0.00 0.00 0.00 2.52
6772 6871 7.811653 AGATTCGAACCATTTCTCTTTTCTTC 58.188 34.615 0.00 0.00 0.00 2.87
6773 6872 6.935741 TTCGAACCATTTCTCTTTTCTTCA 57.064 33.333 0.00 0.00 0.00 3.02
6823 6930 2.820197 ACGACTACATCTTGCAGTGAGA 59.180 45.455 0.00 0.00 0.00 3.27
6856 6964 1.015109 CTGCTGATGATGCCACTGTC 58.985 55.000 0.00 0.00 0.00 3.51
6970 7078 3.652387 TGGCATGGCAAGAGGAGAATATA 59.348 43.478 21.13 0.00 0.00 0.86
7038 7146 6.580788 TGAAACATTCTTTCAATGGCTTGAA 58.419 32.000 7.67 7.67 46.92 2.69
7081 7189 7.595502 CCTAAAATGATACTAGTCCATCACGTC 59.404 40.741 9.94 0.00 34.15 4.34
7113 7221 3.057969 TCCAGTCAGGCAACATTACTG 57.942 47.619 0.00 0.00 40.48 2.74
7313 7421 9.667107 CTGAACAGGAAACTCCACTTATTATTA 57.333 33.333 0.00 0.00 39.61 0.98
7368 7476 4.158764 AGAGCACAAGTCTAGCTACGAAAT 59.841 41.667 0.00 0.00 39.02 2.17
7449 7557 3.242316 GCATTCGTCGTTGTAATTCCTCC 60.242 47.826 0.00 0.00 0.00 4.30
7462 7570 6.122277 TGTAATTCCTCCATTTGTCAGGATC 58.878 40.000 0.00 0.00 36.18 3.36
7467 7575 4.782691 TCCTCCATTTGTCAGGATCAGTAA 59.217 41.667 0.00 0.00 30.92 2.24
7536 7644 7.939039 TCATTAGATATAAGCCACCTTTCCAAG 59.061 37.037 0.00 0.00 32.47 3.61
7539 7647 5.430089 AGATATAAGCCACCTTTCCAAGACT 59.570 40.000 0.00 0.00 32.47 3.24
7541 7649 2.755952 AGCCACCTTTCCAAGACTTT 57.244 45.000 0.00 0.00 0.00 2.66
7542 7650 2.310538 AGCCACCTTTCCAAGACTTTG 58.689 47.619 0.00 0.00 0.00 2.77
7543 7651 5.232705 TAAGCCACCTTTCCAAGACTTTGG 61.233 45.833 0.00 0.00 42.33 3.28
7544 7652 7.636053 TAAGCCACCTTTCCAAGACTTTGGT 62.636 44.000 6.24 0.00 42.02 3.67
7546 7654 9.555097 TAAGCCACCTTTCCAAGACTTTGGTAT 62.555 40.741 6.24 0.00 42.02 2.73
7557 7665 4.469657 AGACTTTGGTATTGCCTTTGACA 58.530 39.130 0.00 0.00 38.35 3.58
7559 7667 4.944048 ACTTTGGTATTGCCTTTGACAAC 58.056 39.130 0.00 0.00 38.35 3.32
7565 8819 8.410673 TTGGTATTGCCTTTGACAACTAATTA 57.589 30.769 0.00 0.00 38.35 1.40
7567 8821 7.668052 TGGTATTGCCTTTGACAACTAATTAGT 59.332 33.333 12.50 12.50 36.71 2.24
7785 9039 3.414549 TTCCGTGTTTGCTTTTCTGAC 57.585 42.857 0.00 0.00 0.00 3.51
7794 9048 7.417612 GTGTTTGCTTTTCTGACAGAAGATAA 58.582 34.615 17.06 8.92 35.37 1.75
7831 9085 9.928618 TTTGATGATTATTTACAGGTTCCCATA 57.071 29.630 0.00 0.00 0.00 2.74
7834 9088 8.792830 ATGATTATTTACAGGTTCCCATATCG 57.207 34.615 0.00 0.00 0.00 2.92
7849 9103 7.085476 TCCCATATCGAAGATTATTTTCCCA 57.915 36.000 0.00 0.00 45.12 4.37
7887 9146 6.573664 TGAGAACATGTTTGGGATAACAAG 57.426 37.500 13.36 0.00 41.02 3.16
7909 9168 5.924356 AGGTTAAATTTGGAAGGTGGTTTG 58.076 37.500 0.00 0.00 0.00 2.93
7910 9169 5.060506 GGTTAAATTTGGAAGGTGGTTTGG 58.939 41.667 0.00 0.00 0.00 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.716539 TACTGTCGCGCCATCCTGC 62.717 63.158 0.00 0.00 0.00 4.85
6 7 1.878522 GTACTGTCGCGCCATCCTG 60.879 63.158 0.00 0.00 0.00 3.86
7 8 1.605058 AAGTACTGTCGCGCCATCCT 61.605 55.000 0.00 0.00 0.00 3.24
8 9 1.153628 AAGTACTGTCGCGCCATCC 60.154 57.895 0.00 0.00 0.00 3.51
9 10 0.736325 ACAAGTACTGTCGCGCCATC 60.736 55.000 0.00 0.00 29.87 3.51
10 11 1.014044 CACAAGTACTGTCGCGCCAT 61.014 55.000 0.00 0.00 35.47 4.40
11 12 1.663388 CACAAGTACTGTCGCGCCA 60.663 57.895 0.00 0.00 35.47 5.69
12 13 0.736325 ATCACAAGTACTGTCGCGCC 60.736 55.000 0.00 0.00 35.47 6.53
13 14 1.846782 CTATCACAAGTACTGTCGCGC 59.153 52.381 0.00 0.00 35.47 6.86
14 15 3.099362 GTCTATCACAAGTACTGTCGCG 58.901 50.000 0.00 0.00 35.47 5.87
15 16 3.099362 CGTCTATCACAAGTACTGTCGC 58.901 50.000 0.00 0.00 35.47 5.19
16 17 3.099362 GCGTCTATCACAAGTACTGTCG 58.901 50.000 0.00 0.00 35.47 4.35
17 18 3.436496 GGCGTCTATCACAAGTACTGTC 58.564 50.000 0.00 0.00 35.47 3.51
18 19 2.159421 CGGCGTCTATCACAAGTACTGT 60.159 50.000 0.00 0.00 39.56 3.55
19 20 2.451132 CGGCGTCTATCACAAGTACTG 58.549 52.381 0.00 0.00 0.00 2.74
20 21 1.404391 CCGGCGTCTATCACAAGTACT 59.596 52.381 6.01 0.00 0.00 2.73
21 22 1.535437 CCCGGCGTCTATCACAAGTAC 60.535 57.143 6.01 0.00 0.00 2.73
22 23 0.742505 CCCGGCGTCTATCACAAGTA 59.257 55.000 6.01 0.00 0.00 2.24
23 24 1.515954 CCCGGCGTCTATCACAAGT 59.484 57.895 6.01 0.00 0.00 3.16
24 25 1.227263 CCCCGGCGTCTATCACAAG 60.227 63.158 6.01 0.00 0.00 3.16
25 26 1.672854 CTCCCCGGCGTCTATCACAA 61.673 60.000 6.01 0.00 0.00 3.33
26 27 2.043752 TCCCCGGCGTCTATCACA 60.044 61.111 6.01 0.00 0.00 3.58
27 28 2.728817 CTCCCCGGCGTCTATCAC 59.271 66.667 6.01 0.00 0.00 3.06
28 29 2.520982 CCTCCCCGGCGTCTATCA 60.521 66.667 6.01 0.00 0.00 2.15
29 30 3.303928 CCCTCCCCGGCGTCTATC 61.304 72.222 6.01 0.00 0.00 2.08
30 31 4.936081 CCCCTCCCCGGCGTCTAT 62.936 72.222 6.01 0.00 0.00 1.98
41 42 3.462678 GAGTGCGACTCCCCCTCC 61.463 72.222 5.33 0.00 39.28 4.30
42 43 2.363147 AGAGTGCGACTCCCCCTC 60.363 66.667 11.24 0.00 46.18 4.30
43 44 1.572689 TAGAGAGTGCGACTCCCCCT 61.573 60.000 11.24 9.28 46.18 4.79
44 45 1.076923 TAGAGAGTGCGACTCCCCC 60.077 63.158 11.24 3.91 46.18 5.40
45 46 1.730451 GCTAGAGAGTGCGACTCCCC 61.730 65.000 11.24 5.78 46.18 4.81
46 47 1.731093 GCTAGAGAGTGCGACTCCC 59.269 63.158 11.24 2.19 46.18 4.30
54 55 0.743688 ACATGAGGCGCTAGAGAGTG 59.256 55.000 7.64 0.18 36.19 3.51
55 56 0.743688 CACATGAGGCGCTAGAGAGT 59.256 55.000 7.64 0.00 0.00 3.24
56 57 1.028130 TCACATGAGGCGCTAGAGAG 58.972 55.000 7.64 0.00 0.00 3.20
57 58 1.339291 CATCACATGAGGCGCTAGAGA 59.661 52.381 7.64 0.00 0.00 3.10
58 59 1.604947 CCATCACATGAGGCGCTAGAG 60.605 57.143 7.64 0.00 0.00 2.43
59 60 0.390492 CCATCACATGAGGCGCTAGA 59.610 55.000 7.64 0.00 0.00 2.43
60 61 1.226686 GCCATCACATGAGGCGCTAG 61.227 60.000 7.64 0.00 38.86 3.42
61 62 1.227645 GCCATCACATGAGGCGCTA 60.228 57.895 7.64 0.00 38.86 4.26
62 63 2.515523 GCCATCACATGAGGCGCT 60.516 61.111 7.64 0.00 38.86 5.92
66 67 0.681887 TTGCAGGCCATCACATGAGG 60.682 55.000 5.01 0.00 0.00 3.86
67 68 0.454600 GTTGCAGGCCATCACATGAG 59.545 55.000 5.01 0.00 0.00 2.90
68 69 0.966875 GGTTGCAGGCCATCACATGA 60.967 55.000 5.01 0.00 0.00 3.07
69 70 1.514087 GGTTGCAGGCCATCACATG 59.486 57.895 5.01 0.00 0.00 3.21
70 71 1.683365 GGGTTGCAGGCCATCACAT 60.683 57.895 5.01 0.00 0.00 3.21
71 72 2.283101 GGGTTGCAGGCCATCACA 60.283 61.111 5.01 0.00 0.00 3.58
72 73 3.070576 GGGGTTGCAGGCCATCAC 61.071 66.667 5.01 0.00 0.00 3.06
73 74 4.380945 GGGGGTTGCAGGCCATCA 62.381 66.667 5.01 0.00 0.00 3.07
83 84 4.770874 CTACGGTGCCGGGGGTTG 62.771 72.222 15.44 0.00 44.69 3.77
88 89 4.789075 CACGACTACGGTGCCGGG 62.789 72.222 15.44 9.52 44.69 5.73
89 90 3.958822 GACACGACTACGGTGCCGG 62.959 68.421 15.44 0.00 44.69 6.13
90 91 2.503375 GACACGACTACGGTGCCG 60.503 66.667 9.29 9.29 44.46 5.69
91 92 1.076533 CATGACACGACTACGGTGCC 61.077 60.000 0.00 0.00 44.46 5.01
92 93 1.076533 CCATGACACGACTACGGTGC 61.077 60.000 0.00 0.00 44.46 5.01
93 94 0.242825 ACCATGACACGACTACGGTG 59.757 55.000 0.00 0.00 44.46 4.94
94 95 0.242825 CACCATGACACGACTACGGT 59.757 55.000 0.00 0.00 44.46 4.83
95 96 0.524414 TCACCATGACACGACTACGG 59.476 55.000 0.00 0.00 44.46 4.02
96 97 1.983605 GTTCACCATGACACGACTACG 59.016 52.381 0.00 0.00 45.75 3.51
97 98 1.983605 CGTTCACCATGACACGACTAC 59.016 52.381 0.00 0.00 34.93 2.73
98 99 1.610038 ACGTTCACCATGACACGACTA 59.390 47.619 15.45 0.00 35.79 2.59
99 100 0.387929 ACGTTCACCATGACACGACT 59.612 50.000 15.45 0.00 35.79 4.18
100 101 0.506932 CACGTTCACCATGACACGAC 59.493 55.000 15.45 0.00 35.79 4.34
101 102 0.386113 TCACGTTCACCATGACACGA 59.614 50.000 15.45 0.00 35.79 4.35
102 103 0.506932 GTCACGTTCACCATGACACG 59.493 55.000 0.00 0.00 41.94 4.49
103 104 0.865769 GGTCACGTTCACCATGACAC 59.134 55.000 8.35 0.00 43.73 3.67
104 105 0.756294 AGGTCACGTTCACCATGACA 59.244 50.000 14.56 0.00 43.73 3.58
105 106 1.429463 GAGGTCACGTTCACCATGAC 58.571 55.000 14.56 4.15 41.68 3.06
106 107 0.320374 GGAGGTCACGTTCACCATGA 59.680 55.000 14.56 0.00 36.23 3.07
107 108 1.014044 CGGAGGTCACGTTCACCATG 61.014 60.000 14.56 1.85 36.23 3.66
108 109 1.183030 TCGGAGGTCACGTTCACCAT 61.183 55.000 14.56 1.73 36.23 3.55
109 110 1.829096 TCGGAGGTCACGTTCACCA 60.829 57.895 14.56 0.00 36.23 4.17
110 111 1.372623 GTCGGAGGTCACGTTCACC 60.373 63.158 5.41 5.41 0.00 4.02
111 112 1.372623 GGTCGGAGGTCACGTTCAC 60.373 63.158 0.00 0.00 0.00 3.18
112 113 1.183030 ATGGTCGGAGGTCACGTTCA 61.183 55.000 0.00 0.00 0.00 3.18
113 114 0.736325 CATGGTCGGAGGTCACGTTC 60.736 60.000 0.00 0.00 0.00 3.95
114 115 1.183030 TCATGGTCGGAGGTCACGTT 61.183 55.000 0.00 0.00 0.00 3.99
115 116 1.605451 TCATGGTCGGAGGTCACGT 60.605 57.895 0.00 0.00 0.00 4.49
116 117 1.153823 GTCATGGTCGGAGGTCACG 60.154 63.158 0.00 0.00 0.00 4.35
117 118 1.153823 CGTCATGGTCGGAGGTCAC 60.154 63.158 0.00 0.00 0.00 3.67
118 119 3.284336 CGTCATGGTCGGAGGTCA 58.716 61.111 0.00 0.00 0.00 4.02
139 140 0.593008 CAACGTGAGGTCGACAACGA 60.593 55.000 31.25 7.92 46.56 3.85
140 141 0.593008 TCAACGTGAGGTCGACAACG 60.593 55.000 26.13 26.13 41.26 4.10
141 142 0.850856 GTCAACGTGAGGTCGACAAC 59.149 55.000 18.91 11.20 31.88 3.32
142 143 0.742505 AGTCAACGTGAGGTCGACAA 59.257 50.000 18.91 0.00 33.30 3.18
143 144 0.030235 CAGTCAACGTGAGGTCGACA 59.970 55.000 18.91 0.00 33.30 4.35
144 145 0.309922 TCAGTCAACGTGAGGTCGAC 59.690 55.000 7.13 7.13 34.70 4.20
145 146 0.309922 GTCAGTCAACGTGAGGTCGA 59.690 55.000 0.00 0.00 34.70 4.20
146 147 0.030235 TGTCAGTCAACGTGAGGTCG 59.970 55.000 0.00 0.00 0.00 4.79
147 148 1.067212 AGTGTCAGTCAACGTGAGGTC 59.933 52.381 0.00 0.00 0.00 3.85
148 149 1.112113 AGTGTCAGTCAACGTGAGGT 58.888 50.000 0.00 0.00 0.00 3.85
149 150 1.202417 ACAGTGTCAGTCAACGTGAGG 60.202 52.381 0.00 0.00 0.00 3.86
150 151 2.120232 GACAGTGTCAGTCAACGTGAG 58.880 52.381 18.54 0.00 36.06 3.51
151 152 1.474879 TGACAGTGTCAGTCAACGTGA 59.525 47.619 22.06 0.00 42.57 4.35
152 153 1.921243 TGACAGTGTCAGTCAACGTG 58.079 50.000 22.06 0.00 42.57 4.49
157 158 1.069204 GAGCCTTGACAGTGTCAGTCA 59.931 52.381 24.25 10.66 43.69 3.41
158 159 1.606737 GGAGCCTTGACAGTGTCAGTC 60.607 57.143 24.25 18.35 43.69 3.51
159 160 0.394565 GGAGCCTTGACAGTGTCAGT 59.605 55.000 24.25 11.78 43.69 3.41
160 161 0.394192 TGGAGCCTTGACAGTGTCAG 59.606 55.000 24.25 15.76 43.69 3.51
161 162 0.394192 CTGGAGCCTTGACAGTGTCA 59.606 55.000 22.06 22.06 41.09 3.58
162 163 0.681733 TCTGGAGCCTTGACAGTGTC 59.318 55.000 16.68 16.68 34.02 3.67
163 164 0.394565 GTCTGGAGCCTTGACAGTGT 59.605 55.000 0.00 0.00 34.02 3.55
164 165 0.683973 AGTCTGGAGCCTTGACAGTG 59.316 55.000 12.88 0.00 34.02 3.66
165 166 0.972883 GAGTCTGGAGCCTTGACAGT 59.027 55.000 12.88 0.00 34.02 3.55
166 167 0.248843 GGAGTCTGGAGCCTTGACAG 59.751 60.000 12.88 0.00 33.56 3.51
167 168 1.536073 CGGAGTCTGGAGCCTTGACA 61.536 60.000 12.88 0.00 33.56 3.58
168 169 1.216710 CGGAGTCTGGAGCCTTGAC 59.783 63.158 0.00 0.00 0.00 3.18
169 170 1.076727 TCGGAGTCTGGAGCCTTGA 59.923 57.895 0.00 0.00 0.00 3.02
170 171 1.216710 GTCGGAGTCTGGAGCCTTG 59.783 63.158 0.00 0.00 0.00 3.61
171 172 0.832135 TTGTCGGAGTCTGGAGCCTT 60.832 55.000 0.00 0.00 0.00 4.35
172 173 1.228894 TTGTCGGAGTCTGGAGCCT 60.229 57.895 0.00 0.00 0.00 4.58
173 174 1.216710 CTTGTCGGAGTCTGGAGCC 59.783 63.158 0.00 0.00 0.00 4.70
174 175 1.216710 CCTTGTCGGAGTCTGGAGC 59.783 63.158 0.00 0.00 33.16 4.70
175 176 1.203523 CTTCCTTGTCGGAGTCTGGAG 59.796 57.143 0.00 0.00 44.28 3.86
176 177 1.203013 TCTTCCTTGTCGGAGTCTGGA 60.203 52.381 0.00 0.00 44.28 3.86
177 178 1.203523 CTCTTCCTTGTCGGAGTCTGG 59.796 57.143 0.00 0.00 44.28 3.86
178 179 1.889829 ACTCTTCCTTGTCGGAGTCTG 59.110 52.381 0.00 0.00 44.28 3.51
179 180 2.296073 ACTCTTCCTTGTCGGAGTCT 57.704 50.000 0.00 0.00 44.28 3.24
180 181 3.119424 CCTTACTCTTCCTTGTCGGAGTC 60.119 52.174 0.00 0.00 44.28 3.36
181 182 2.826725 CCTTACTCTTCCTTGTCGGAGT 59.173 50.000 0.00 0.00 44.28 3.85
182 183 2.417515 GCCTTACTCTTCCTTGTCGGAG 60.418 54.545 0.00 0.00 44.28 4.63
183 184 1.549170 GCCTTACTCTTCCTTGTCGGA 59.451 52.381 0.00 0.00 41.06 4.55
184 185 1.275291 TGCCTTACTCTTCCTTGTCGG 59.725 52.381 0.00 0.00 0.00 4.79
185 186 2.743636 TGCCTTACTCTTCCTTGTCG 57.256 50.000 0.00 0.00 0.00 4.35
186 187 3.055094 TCCATGCCTTACTCTTCCTTGTC 60.055 47.826 0.00 0.00 0.00 3.18
187 188 2.912956 TCCATGCCTTACTCTTCCTTGT 59.087 45.455 0.00 0.00 0.00 3.16
188 189 3.634397 TCCATGCCTTACTCTTCCTTG 57.366 47.619 0.00 0.00 0.00 3.61
189 190 3.846588 TCTTCCATGCCTTACTCTTCCTT 59.153 43.478 0.00 0.00 0.00 3.36
190 191 3.198853 GTCTTCCATGCCTTACTCTTCCT 59.801 47.826 0.00 0.00 0.00 3.36
191 192 3.536570 GTCTTCCATGCCTTACTCTTCC 58.463 50.000 0.00 0.00 0.00 3.46
192 193 3.190874 CGTCTTCCATGCCTTACTCTTC 58.809 50.000 0.00 0.00 0.00 2.87
193 194 2.093447 CCGTCTTCCATGCCTTACTCTT 60.093 50.000 0.00 0.00 0.00 2.85
194 195 1.482593 CCGTCTTCCATGCCTTACTCT 59.517 52.381 0.00 0.00 0.00 3.24
195 196 1.207329 ACCGTCTTCCATGCCTTACTC 59.793 52.381 0.00 0.00 0.00 2.59
196 197 1.066143 CACCGTCTTCCATGCCTTACT 60.066 52.381 0.00 0.00 0.00 2.24
197 198 1.066430 TCACCGTCTTCCATGCCTTAC 60.066 52.381 0.00 0.00 0.00 2.34
198 199 1.066430 GTCACCGTCTTCCATGCCTTA 60.066 52.381 0.00 0.00 0.00 2.69
199 200 0.321653 GTCACCGTCTTCCATGCCTT 60.322 55.000 0.00 0.00 0.00 4.35
200 201 1.194781 AGTCACCGTCTTCCATGCCT 61.195 55.000 0.00 0.00 0.00 4.75
201 202 0.741221 GAGTCACCGTCTTCCATGCC 60.741 60.000 0.00 0.00 0.00 4.40
202 203 0.741221 GGAGTCACCGTCTTCCATGC 60.741 60.000 0.00 0.00 0.00 4.06
203 204 0.898320 AGGAGTCACCGTCTTCCATG 59.102 55.000 0.00 0.00 44.74 3.66
204 205 1.276421 CAAGGAGTCACCGTCTTCCAT 59.724 52.381 0.00 0.00 44.74 3.41
205 206 0.679505 CAAGGAGTCACCGTCTTCCA 59.320 55.000 0.00 0.00 44.74 3.53
206 207 0.966920 TCAAGGAGTCACCGTCTTCC 59.033 55.000 0.00 0.00 44.74 3.46
207 208 1.614413 ACTCAAGGAGTCACCGTCTTC 59.386 52.381 0.00 0.00 38.71 2.87
208 209 1.705873 ACTCAAGGAGTCACCGTCTT 58.294 50.000 0.00 0.00 38.71 3.01
209 210 3.441241 ACTCAAGGAGTCACCGTCT 57.559 52.632 0.00 0.00 38.71 4.18
217 218 2.301296 CCACTCACATGACTCAAGGAGT 59.699 50.000 0.00 0.00 46.42 3.85
218 219 2.301296 ACCACTCACATGACTCAAGGAG 59.699 50.000 0.00 0.00 35.52 3.69
219 220 2.037641 CACCACTCACATGACTCAAGGA 59.962 50.000 0.00 0.00 0.00 3.36
220 221 2.420642 CACCACTCACATGACTCAAGG 58.579 52.381 0.00 0.00 0.00 3.61
221 222 1.802960 GCACCACTCACATGACTCAAG 59.197 52.381 0.00 0.00 0.00 3.02
222 223 1.873486 CGCACCACTCACATGACTCAA 60.873 52.381 0.00 0.00 0.00 3.02
223 224 0.319813 CGCACCACTCACATGACTCA 60.320 55.000 0.00 0.00 0.00 3.41
224 225 0.319900 ACGCACCACTCACATGACTC 60.320 55.000 0.00 0.00 0.00 3.36
225 226 0.601046 CACGCACCACTCACATGACT 60.601 55.000 0.00 0.00 0.00 3.41
226 227 0.880278 ACACGCACCACTCACATGAC 60.880 55.000 0.00 0.00 0.00 3.06
227 228 0.599991 GACACGCACCACTCACATGA 60.600 55.000 0.00 0.00 0.00 3.07
228 229 0.879839 TGACACGCACCACTCACATG 60.880 55.000 0.00 0.00 0.00 3.21
229 230 0.880278 GTGACACGCACCACTCACAT 60.880 55.000 0.00 0.00 41.78 3.21
230 231 1.520564 GTGACACGCACCACTCACA 60.521 57.895 0.00 0.00 41.78 3.58
231 232 3.319904 GTGACACGCACCACTCAC 58.680 61.111 0.00 0.00 41.78 3.51
239 240 3.066760 CAGAGTAGGATATGTGACACGCA 59.933 47.826 0.22 0.00 0.00 5.24
240 241 3.315470 TCAGAGTAGGATATGTGACACGC 59.685 47.826 0.22 0.00 0.00 5.34
241 242 5.239525 TCATCAGAGTAGGATATGTGACACG 59.760 44.000 0.22 0.00 0.00 4.49
242 243 6.442952 GTCATCAGAGTAGGATATGTGACAC 58.557 44.000 0.00 0.00 0.00 3.67
243 244 5.536538 GGTCATCAGAGTAGGATATGTGACA 59.463 44.000 0.00 0.00 0.00 3.58
244 245 5.335269 CGGTCATCAGAGTAGGATATGTGAC 60.335 48.000 0.00 0.00 0.00 3.67
245 246 4.762251 CGGTCATCAGAGTAGGATATGTGA 59.238 45.833 0.00 0.00 0.00 3.58
246 247 4.082517 CCGGTCATCAGAGTAGGATATGTG 60.083 50.000 0.00 0.00 0.00 3.21
247 248 4.082845 CCGGTCATCAGAGTAGGATATGT 58.917 47.826 0.00 0.00 0.00 2.29
248 249 4.336280 TCCGGTCATCAGAGTAGGATATG 58.664 47.826 0.00 0.00 0.00 1.78
249 250 4.594970 CTCCGGTCATCAGAGTAGGATAT 58.405 47.826 0.00 0.00 0.00 1.63
250 251 3.811098 GCTCCGGTCATCAGAGTAGGATA 60.811 52.174 0.00 0.00 0.00 2.59
251 252 2.870175 CTCCGGTCATCAGAGTAGGAT 58.130 52.381 0.00 0.00 0.00 3.24
252 253 1.751032 GCTCCGGTCATCAGAGTAGGA 60.751 57.143 0.00 0.00 0.00 2.94
253 254 0.671251 GCTCCGGTCATCAGAGTAGG 59.329 60.000 0.00 0.00 0.00 3.18
254 255 1.393603 TGCTCCGGTCATCAGAGTAG 58.606 55.000 0.00 0.00 0.00 2.57
255 256 1.476891 GTTGCTCCGGTCATCAGAGTA 59.523 52.381 0.00 0.00 0.00 2.59
256 257 0.247736 GTTGCTCCGGTCATCAGAGT 59.752 55.000 0.00 0.00 0.00 3.24
257 258 0.247460 TGTTGCTCCGGTCATCAGAG 59.753 55.000 0.00 0.00 0.00 3.35
258 259 0.037326 GTGTTGCTCCGGTCATCAGA 60.037 55.000 0.00 0.00 0.00 3.27
259 260 0.036952 AGTGTTGCTCCGGTCATCAG 60.037 55.000 0.00 0.00 0.00 2.90
260 261 0.396435 AAGTGTTGCTCCGGTCATCA 59.604 50.000 0.00 3.80 0.00 3.07
261 262 1.197721 CAAAGTGTTGCTCCGGTCATC 59.802 52.381 0.00 1.03 0.00 2.92
262 263 1.202758 TCAAAGTGTTGCTCCGGTCAT 60.203 47.619 0.00 0.00 34.50 3.06
263 264 0.179234 TCAAAGTGTTGCTCCGGTCA 59.821 50.000 0.00 0.00 34.50 4.02
264 265 0.868406 CTCAAAGTGTTGCTCCGGTC 59.132 55.000 0.00 0.00 34.50 4.79
265 266 0.535102 CCTCAAAGTGTTGCTCCGGT 60.535 55.000 0.00 0.00 34.50 5.28
266 267 1.237285 CCCTCAAAGTGTTGCTCCGG 61.237 60.000 0.00 0.00 34.50 5.14
267 268 1.237285 CCCCTCAAAGTGTTGCTCCG 61.237 60.000 0.00 0.00 34.50 4.63
268 269 1.527433 GCCCCTCAAAGTGTTGCTCC 61.527 60.000 0.00 0.00 34.50 4.70
269 270 1.856265 CGCCCCTCAAAGTGTTGCTC 61.856 60.000 0.00 0.00 34.50 4.26
270 271 1.898574 CGCCCCTCAAAGTGTTGCT 60.899 57.895 0.00 0.00 34.50 3.91
271 272 2.644992 CGCCCCTCAAAGTGTTGC 59.355 61.111 0.00 0.00 34.50 4.17
272 273 1.733402 TTGCGCCCCTCAAAGTGTTG 61.733 55.000 4.18 0.00 35.95 3.33
273 274 1.454847 TTGCGCCCCTCAAAGTGTT 60.455 52.632 4.18 0.00 0.00 3.32
274 275 2.193536 GTTGCGCCCCTCAAAGTGT 61.194 57.895 4.18 0.00 0.00 3.55
275 276 2.644992 GTTGCGCCCCTCAAAGTG 59.355 61.111 4.18 0.00 0.00 3.16
276 277 2.597510 GGTTGCGCCCCTCAAAGT 60.598 61.111 4.18 0.00 0.00 2.66
277 278 2.597217 TGGTTGCGCCCCTCAAAG 60.597 61.111 4.18 0.00 36.04 2.77
278 279 2.597217 CTGGTTGCGCCCCTCAAA 60.597 61.111 4.18 0.00 36.04 2.69
288 289 4.947147 TGTCCGGTGGCTGGTTGC 62.947 66.667 0.00 0.00 41.94 4.17
289 290 2.034066 ATGTCCGGTGGCTGGTTG 59.966 61.111 0.00 0.00 0.00 3.77
290 291 2.034066 CATGTCCGGTGGCTGGTT 59.966 61.111 0.00 0.00 0.00 3.67
291 292 4.033776 CCATGTCCGGTGGCTGGT 62.034 66.667 0.00 0.00 0.00 4.00
292 293 3.716195 TCCATGTCCGGTGGCTGG 61.716 66.667 0.00 5.04 36.66 4.85
293 294 2.436646 GTCCATGTCCGGTGGCTG 60.437 66.667 0.00 0.00 36.66 4.85
294 295 2.300967 ATGTCCATGTCCGGTGGCT 61.301 57.895 0.00 0.00 36.66 4.75
295 296 2.114670 CATGTCCATGTCCGGTGGC 61.115 63.158 0.00 0.00 36.66 5.01
296 297 1.451927 CCATGTCCATGTCCGGTGG 60.452 63.158 0.00 1.35 37.11 4.61
297 298 2.114670 GCCATGTCCATGTCCGGTG 61.115 63.158 0.00 0.00 37.11 4.94
298 299 2.135903 TTGCCATGTCCATGTCCGGT 62.136 55.000 0.00 0.00 37.11 5.28
299 300 0.964860 TTTGCCATGTCCATGTCCGG 60.965 55.000 0.00 0.00 37.11 5.14
300 301 0.452987 CTTTGCCATGTCCATGTCCG 59.547 55.000 6.53 0.00 37.11 4.79
301 302 0.174162 GCTTTGCCATGTCCATGTCC 59.826 55.000 6.53 0.00 37.11 4.02
302 303 3.727419 GCTTTGCCATGTCCATGTC 57.273 52.632 6.53 0.00 37.11 3.06
314 315 3.491652 GAGCTCGTCCGGCTTTGC 61.492 66.667 0.00 0.00 40.40 3.68
315 316 2.815647 GGAGCTCGTCCGGCTTTG 60.816 66.667 7.83 0.00 40.40 2.77
325 326 1.134788 ACCCAATCTAAACGGAGCTCG 60.135 52.381 7.83 5.83 45.88 5.03
326 327 2.693267 ACCCAATCTAAACGGAGCTC 57.307 50.000 4.71 4.71 0.00 4.09
327 328 3.434940 AAACCCAATCTAAACGGAGCT 57.565 42.857 0.00 0.00 0.00 4.09
328 329 4.456566 TGTAAAACCCAATCTAAACGGAGC 59.543 41.667 0.00 0.00 0.00 4.70
329 330 6.753107 ATGTAAAACCCAATCTAAACGGAG 57.247 37.500 0.00 0.00 0.00 4.63
330 331 6.570764 GCAATGTAAAACCCAATCTAAACGGA 60.571 38.462 0.00 0.00 0.00 4.69
331 332 5.575218 GCAATGTAAAACCCAATCTAAACGG 59.425 40.000 0.00 0.00 0.00 4.44
332 333 6.153067 TGCAATGTAAAACCCAATCTAAACG 58.847 36.000 0.00 0.00 0.00 3.60
333 334 7.962917 CATGCAATGTAAAACCCAATCTAAAC 58.037 34.615 0.00 0.00 40.20 2.01
356 357 4.249638 ACCATTGTACATGCCCTTACAT 57.750 40.909 0.00 0.00 0.00 2.29
357 358 3.730215 ACCATTGTACATGCCCTTACA 57.270 42.857 0.00 0.00 0.00 2.41
358 359 6.709018 ATAAACCATTGTACATGCCCTTAC 57.291 37.500 0.00 0.00 0.00 2.34
359 360 8.275758 TCTTATAAACCATTGTACATGCCCTTA 58.724 33.333 0.00 0.00 0.00 2.69
360 361 7.122715 TCTTATAAACCATTGTACATGCCCTT 58.877 34.615 0.00 0.00 0.00 3.95
361 362 6.668645 TCTTATAAACCATTGTACATGCCCT 58.331 36.000 0.00 0.00 0.00 5.19
362 363 6.952773 TCTTATAAACCATTGTACATGCCC 57.047 37.500 0.00 0.00 0.00 5.36
363 364 9.284968 ACTATCTTATAAACCATTGTACATGCC 57.715 33.333 0.00 0.00 0.00 4.40
382 383 9.979578 CATGCAGACTTTAGATAAGACTATCTT 57.020 33.333 0.00 0.00 41.31 2.40
383 384 9.142014 ACATGCAGACTTTAGATAAGACTATCT 57.858 33.333 0.00 0.68 45.21 1.98
398 399 9.890629 TGTTATCTCTAAATTACATGCAGACTT 57.109 29.630 0.00 0.00 0.00 3.01
399 400 9.890629 TTGTTATCTCTAAATTACATGCAGACT 57.109 29.630 0.00 0.00 0.00 3.24
426 427 9.247861 GAGATGGCCCATTATAGACATATTTTT 57.752 33.333 0.00 0.00 0.00 1.94
427 428 8.618385 AGAGATGGCCCATTATAGACATATTTT 58.382 33.333 0.00 0.00 0.00 1.82
428 429 8.167691 AGAGATGGCCCATTATAGACATATTT 57.832 34.615 0.00 0.00 0.00 1.40
429 430 7.761981 AGAGATGGCCCATTATAGACATATT 57.238 36.000 0.00 0.00 0.00 1.28
430 431 7.761981 AAGAGATGGCCCATTATAGACATAT 57.238 36.000 0.00 0.00 0.00 1.78
431 432 7.147655 GCTAAGAGATGGCCCATTATAGACATA 60.148 40.741 0.00 0.00 0.00 2.29
432 433 6.352565 GCTAAGAGATGGCCCATTATAGACAT 60.353 42.308 0.00 0.00 0.00 3.06
433 434 5.046304 GCTAAGAGATGGCCCATTATAGACA 60.046 44.000 0.00 0.00 0.00 3.41
434 435 5.423886 GCTAAGAGATGGCCCATTATAGAC 58.576 45.833 0.00 0.00 0.00 2.59
435 436 5.683876 GCTAAGAGATGGCCCATTATAGA 57.316 43.478 0.00 0.00 0.00 1.98
445 446 5.220710 TGAAGATAAGGCTAAGAGATGGC 57.779 43.478 0.00 0.00 34.16 4.40
446 447 9.213799 GTTATTGAAGATAAGGCTAAGAGATGG 57.786 37.037 0.00 0.00 0.00 3.51
447 448 9.995003 AGTTATTGAAGATAAGGCTAAGAGATG 57.005 33.333 0.00 0.00 0.00 2.90
450 451 9.418045 GCTAGTTATTGAAGATAAGGCTAAGAG 57.582 37.037 0.00 0.00 0.00 2.85
451 452 9.148879 AGCTAGTTATTGAAGATAAGGCTAAGA 57.851 33.333 0.00 0.00 0.00 2.10
470 471 9.515226 TCACCATGTTTTTAGAAATAGCTAGTT 57.485 29.630 6.06 6.06 0.00 2.24
471 472 9.167311 CTCACCATGTTTTTAGAAATAGCTAGT 57.833 33.333 0.00 0.00 0.00 2.57
472 473 9.383519 TCTCACCATGTTTTTAGAAATAGCTAG 57.616 33.333 0.00 0.00 0.00 3.42
473 474 9.162764 GTCTCACCATGTTTTTAGAAATAGCTA 57.837 33.333 0.00 0.00 0.00 3.32
474 475 7.665559 TGTCTCACCATGTTTTTAGAAATAGCT 59.334 33.333 0.00 0.00 0.00 3.32
475 476 7.816640 TGTCTCACCATGTTTTTAGAAATAGC 58.183 34.615 0.00 0.00 0.00 2.97
484 485 8.752187 AGCATAAATATGTCTCACCATGTTTTT 58.248 29.630 2.63 0.00 37.36 1.94
485 486 8.297470 AGCATAAATATGTCTCACCATGTTTT 57.703 30.769 2.63 0.00 37.36 2.43
486 487 7.886629 AGCATAAATATGTCTCACCATGTTT 57.113 32.000 2.63 0.00 38.90 2.83
487 488 8.978874 TTAGCATAAATATGTCTCACCATGTT 57.021 30.769 2.63 0.00 36.11 2.71
488 489 8.432013 TCTTAGCATAAATATGTCTCACCATGT 58.568 33.333 2.63 0.00 36.11 3.21
489 490 8.837788 TCTTAGCATAAATATGTCTCACCATG 57.162 34.615 2.63 0.00 36.11 3.66
490 491 8.874156 TCTCTTAGCATAAATATGTCTCACCAT 58.126 33.333 2.63 0.00 36.11 3.55
491 492 8.250143 TCTCTTAGCATAAATATGTCTCACCA 57.750 34.615 2.63 0.00 36.11 4.17
492 493 9.364989 GATCTCTTAGCATAAATATGTCTCACC 57.635 37.037 2.63 0.00 36.11 4.02
493 494 9.920133 TGATCTCTTAGCATAAATATGTCTCAC 57.080 33.333 0.00 0.00 36.11 3.51
513 514 8.994429 TTTAAGACAAGACAAGAGATGATCTC 57.006 34.615 14.47 14.47 43.70 2.75
531 532 8.554835 AAGGCTTGTCTTCTCTTATTTAAGAC 57.445 34.615 0.00 7.35 45.99 3.01
532 533 9.574516 AAAAGGCTTGTCTTCTCTTATTTAAGA 57.425 29.630 0.00 0.44 39.82 2.10
533 534 9.833182 GAAAAGGCTTGTCTTCTCTTATTTAAG 57.167 33.333 10.26 0.00 34.65 1.85
534 535 9.574516 AGAAAAGGCTTGTCTTCTCTTATTTAA 57.425 29.630 14.33 0.00 0.00 1.52
535 536 9.574516 AAGAAAAGGCTTGTCTTCTCTTATTTA 57.425 29.630 23.96 0.00 33.68 1.40
536 537 8.470657 AAGAAAAGGCTTGTCTTCTCTTATTT 57.529 30.769 23.96 2.07 33.68 1.40
537 538 9.746457 ATAAGAAAAGGCTTGTCTTCTCTTATT 57.254 29.630 30.86 11.70 40.94 1.40
538 539 9.171877 CATAAGAAAAGGCTTGTCTTCTCTTAT 57.828 33.333 30.86 18.17 42.82 1.73
539 540 8.375506 TCATAAGAAAAGGCTTGTCTTCTCTTA 58.624 33.333 30.86 16.85 39.30 2.10
540 541 7.227156 TCATAAGAAAAGGCTTGTCTTCTCTT 58.773 34.615 30.86 18.21 37.66 2.85
541 542 6.773638 TCATAAGAAAAGGCTTGTCTTCTCT 58.226 36.000 30.86 16.87 33.70 3.10
542 543 7.622893 ATCATAAGAAAAGGCTTGTCTTCTC 57.377 36.000 30.86 8.39 33.70 2.87
543 544 8.414629 AAATCATAAGAAAAGGCTTGTCTTCT 57.585 30.769 30.86 21.01 33.70 2.85
544 545 8.518702 AGAAATCATAAGAAAAGGCTTGTCTTC 58.481 33.333 30.86 17.63 33.70 2.87
545 546 8.414629 AGAAATCATAAGAAAAGGCTTGTCTT 57.585 30.769 30.04 30.04 35.77 3.01
546 547 9.692325 ATAGAAATCATAAGAAAAGGCTTGTCT 57.308 29.630 14.33 14.33 0.00 3.41
552 553 9.534565 GGGAAAATAGAAATCATAAGAAAAGGC 57.465 33.333 0.00 0.00 0.00 4.35
558 559 9.799106 GAGATGGGGAAAATAGAAATCATAAGA 57.201 33.333 0.00 0.00 0.00 2.10
559 560 9.578576 TGAGATGGGGAAAATAGAAATCATAAG 57.421 33.333 0.00 0.00 0.00 1.73
572 573 9.807921 GTAGGATAAATTATGAGATGGGGAAAA 57.192 33.333 0.00 0.00 0.00 2.29
573 574 8.100791 CGTAGGATAAATTATGAGATGGGGAAA 58.899 37.037 0.00 0.00 0.00 3.13
574 575 7.236847 ACGTAGGATAAATTATGAGATGGGGAA 59.763 37.037 0.00 0.00 0.00 3.97
575 576 6.729100 ACGTAGGATAAATTATGAGATGGGGA 59.271 38.462 0.00 0.00 0.00 4.81
576 577 6.818644 CACGTAGGATAAATTATGAGATGGGG 59.181 42.308 0.00 0.00 0.00 4.96
577 578 7.545965 GTCACGTAGGATAAATTATGAGATGGG 59.454 40.741 0.00 0.00 0.00 4.00
578 579 8.088365 TGTCACGTAGGATAAATTATGAGATGG 58.912 37.037 0.00 0.00 0.00 3.51
579 580 9.645059 ATGTCACGTAGGATAAATTATGAGATG 57.355 33.333 0.00 0.00 0.00 2.90
581 582 9.476202 CAATGTCACGTAGGATAAATTATGAGA 57.524 33.333 0.00 0.00 0.00 3.27
582 583 8.223769 GCAATGTCACGTAGGATAAATTATGAG 58.776 37.037 0.00 0.00 0.00 2.90
583 584 7.931407 AGCAATGTCACGTAGGATAAATTATGA 59.069 33.333 0.00 0.00 0.00 2.15
584 585 8.087982 AGCAATGTCACGTAGGATAAATTATG 57.912 34.615 0.00 0.00 0.00 1.90
585 586 9.772973 TTAGCAATGTCACGTAGGATAAATTAT 57.227 29.630 0.00 0.00 0.00 1.28
586 587 9.256477 CTTAGCAATGTCACGTAGGATAAATTA 57.744 33.333 0.00 0.00 0.00 1.40
587 588 7.985184 TCTTAGCAATGTCACGTAGGATAAATT 59.015 33.333 0.00 0.00 0.00 1.82
588 589 7.497595 TCTTAGCAATGTCACGTAGGATAAAT 58.502 34.615 0.00 0.00 0.00 1.40
589 590 6.869695 TCTTAGCAATGTCACGTAGGATAAA 58.130 36.000 0.00 0.00 0.00 1.40
590 591 6.459670 TCTTAGCAATGTCACGTAGGATAA 57.540 37.500 0.00 0.00 0.00 1.75
591 592 6.650427 ATCTTAGCAATGTCACGTAGGATA 57.350 37.500 0.00 0.00 0.00 2.59
592 593 5.537300 ATCTTAGCAATGTCACGTAGGAT 57.463 39.130 0.00 0.00 0.00 3.24
593 594 5.826208 TCTATCTTAGCAATGTCACGTAGGA 59.174 40.000 0.00 0.00 0.00 2.94
594 595 6.073327 TCTATCTTAGCAATGTCACGTAGG 57.927 41.667 0.00 0.00 0.00 3.18
595 596 6.418226 GGTTCTATCTTAGCAATGTCACGTAG 59.582 42.308 0.00 0.00 0.00 3.51
596 597 6.127563 TGGTTCTATCTTAGCAATGTCACGTA 60.128 38.462 0.00 0.00 0.00 3.57
597 598 5.109903 GGTTCTATCTTAGCAATGTCACGT 58.890 41.667 0.00 0.00 0.00 4.49
598 599 5.109210 TGGTTCTATCTTAGCAATGTCACG 58.891 41.667 0.00 0.00 0.00 4.35
599 600 7.066284 ACAATGGTTCTATCTTAGCAATGTCAC 59.934 37.037 0.00 0.00 32.21 3.67
600 601 7.112122 ACAATGGTTCTATCTTAGCAATGTCA 58.888 34.615 0.00 0.00 32.21 3.58
601 602 7.559590 ACAATGGTTCTATCTTAGCAATGTC 57.440 36.000 0.00 0.00 32.21 3.06
602 603 8.046708 TGTACAATGGTTCTATCTTAGCAATGT 58.953 33.333 0.00 0.00 38.81 2.71
603 604 8.437360 TGTACAATGGTTCTATCTTAGCAATG 57.563 34.615 0.00 0.00 0.00 2.82
604 605 9.060347 CATGTACAATGGTTCTATCTTAGCAAT 57.940 33.333 0.00 0.00 0.00 3.56
605 606 7.498900 CCATGTACAATGGTTCTATCTTAGCAA 59.501 37.037 0.00 0.00 34.56 3.91
606 607 6.992123 CCATGTACAATGGTTCTATCTTAGCA 59.008 38.462 0.00 0.00 34.56 3.49
607 608 6.073003 GCCATGTACAATGGTTCTATCTTAGC 60.073 42.308 19.22 3.97 41.17 3.09
608 609 6.428159 GGCCATGTACAATGGTTCTATCTTAG 59.572 42.308 19.22 0.00 41.17 2.18
609 610 6.101150 AGGCCATGTACAATGGTTCTATCTTA 59.899 38.462 19.22 0.00 41.17 2.10
610 611 5.103940 AGGCCATGTACAATGGTTCTATCTT 60.104 40.000 19.22 2.98 41.17 2.40
611 612 4.413520 AGGCCATGTACAATGGTTCTATCT 59.586 41.667 19.22 9.39 41.17 1.98
612 613 4.718961 AGGCCATGTACAATGGTTCTATC 58.281 43.478 19.22 7.20 41.17 2.08
613 614 4.796110 AGGCCATGTACAATGGTTCTAT 57.204 40.909 19.22 5.36 41.17 1.98
614 615 5.433526 GTTAGGCCATGTACAATGGTTCTA 58.566 41.667 19.22 17.40 41.17 2.10
615 616 4.270008 GTTAGGCCATGTACAATGGTTCT 58.730 43.478 19.22 18.05 41.17 3.01
616 617 3.064820 CGTTAGGCCATGTACAATGGTTC 59.935 47.826 19.22 14.01 41.17 3.62
617 618 3.013921 CGTTAGGCCATGTACAATGGTT 58.986 45.455 19.22 13.18 41.17 3.67
618 619 2.639065 CGTTAGGCCATGTACAATGGT 58.361 47.619 19.22 8.48 41.17 3.55
619 620 1.946768 CCGTTAGGCCATGTACAATGG 59.053 52.381 5.01 15.87 41.99 3.16
620 621 2.912771 TCCGTTAGGCCATGTACAATG 58.087 47.619 5.01 0.00 37.47 2.82
621 622 3.857157 ATCCGTTAGGCCATGTACAAT 57.143 42.857 5.01 0.00 37.47 2.71
622 623 3.637911 AATCCGTTAGGCCATGTACAA 57.362 42.857 5.01 0.00 37.47 2.41
623 624 3.055021 TCAAATCCGTTAGGCCATGTACA 60.055 43.478 5.01 0.00 37.47 2.90
624 625 3.537580 TCAAATCCGTTAGGCCATGTAC 58.462 45.455 5.01 0.00 37.47 2.90
625 626 3.452990 TCTCAAATCCGTTAGGCCATGTA 59.547 43.478 5.01 0.00 37.47 2.29
626 627 2.238646 TCTCAAATCCGTTAGGCCATGT 59.761 45.455 5.01 0.00 37.47 3.21
627 628 2.917933 TCTCAAATCCGTTAGGCCATG 58.082 47.619 5.01 0.00 37.47 3.66
628 629 3.864789 ATCTCAAATCCGTTAGGCCAT 57.135 42.857 5.01 0.00 37.47 4.40
629 630 3.644966 AATCTCAAATCCGTTAGGCCA 57.355 42.857 5.01 0.00 37.47 5.36
630 631 4.035675 CAGAAATCTCAAATCCGTTAGGCC 59.964 45.833 0.00 0.00 37.47 5.19
631 632 4.876107 TCAGAAATCTCAAATCCGTTAGGC 59.124 41.667 0.00 0.00 37.47 3.93
632 633 6.985188 TTCAGAAATCTCAAATCCGTTAGG 57.015 37.500 0.00 0.00 39.46 2.69
635 636 8.462016 CCTTAATTCAGAAATCTCAAATCCGTT 58.538 33.333 0.00 0.00 0.00 4.44
677 681 5.352293 CGACCCGTTAAGCCTAAGTAATTTT 59.648 40.000 0.00 0.00 0.00 1.82
679 683 4.081476 ACGACCCGTTAAGCCTAAGTAATT 60.081 41.667 0.00 0.00 36.35 1.40
710 715 1.631405 TTCAACCCCCTCAAATGCAG 58.369 50.000 0.00 0.00 0.00 4.41
711 716 1.901159 CATTCAACCCCCTCAAATGCA 59.099 47.619 0.00 0.00 0.00 3.96
744 767 1.004200 TCCCGCCGAGGAAAGAAAC 60.004 57.895 0.00 0.00 45.00 2.78
823 848 4.742201 CCCGCCACGTGGAGAGTG 62.742 72.222 38.30 20.99 37.14 3.51
881 916 1.613437 CGGAAGCCAAAACTCCATTGT 59.387 47.619 0.00 0.00 0.00 2.71
909 944 1.149148 GGCTCGGTTGAGAGAAACAC 58.851 55.000 0.00 0.00 45.57 3.32
980 1015 4.785376 AGAGAGAGAAAGAGAGAGGAGAGT 59.215 45.833 0.00 0.00 0.00 3.24
1055 1090 3.723348 GCGTCTGTTCCGTTGGGC 61.723 66.667 0.00 0.00 0.00 5.36
1106 1145 3.499737 CACTCGTTGCCGGCCATC 61.500 66.667 26.77 13.21 33.95 3.51
1136 1175 1.205655 CTGTCAAGAATCGCCTCCAGA 59.794 52.381 0.00 0.00 0.00 3.86
1301 1346 0.764890 CTTTCACCACCTCCTCCACA 59.235 55.000 0.00 0.00 0.00 4.17
1344 1389 1.208052 CACGACCTTGATCCATGTCCT 59.792 52.381 0.00 0.00 0.00 3.85
1503 1550 3.931907 AATCAACAAGGGGATCGATCA 57.068 42.857 25.93 3.28 0.00 2.92
1674 1724 4.443913 TTGGAAACATCTCGATACGTCA 57.556 40.909 0.00 0.00 42.32 4.35
1707 1757 1.741706 TGACCGATCTAACCTCACGAC 59.258 52.381 0.00 0.00 0.00 4.34
1787 1845 4.559251 CCAGAGTACTGAATTCTCGAAACG 59.441 45.833 0.00 0.00 46.03 3.60
1810 1868 2.120232 CGTGTGTGTTGTCTCTGAGAC 58.880 52.381 26.86 26.86 45.26 3.36
1870 1936 5.809562 GCAATCATACATCCTATCTCCGAAG 59.190 44.000 0.00 0.00 0.00 3.79
1873 1939 5.105595 TCAGCAATCATACATCCTATCTCCG 60.106 44.000 0.00 0.00 0.00 4.63
1876 1942 6.154192 ACGATCAGCAATCATACATCCTATCT 59.846 38.462 0.00 0.00 33.65 1.98
1877 1943 6.336566 ACGATCAGCAATCATACATCCTATC 58.663 40.000 0.00 0.00 33.65 2.08
1878 1944 6.291648 ACGATCAGCAATCATACATCCTAT 57.708 37.500 0.00 0.00 33.65 2.57
1879 1945 5.728637 ACGATCAGCAATCATACATCCTA 57.271 39.130 0.00 0.00 33.65 2.94
1881 1947 5.468072 AGAAACGATCAGCAATCATACATCC 59.532 40.000 0.00 0.00 33.65 3.51
1888 1954 4.064388 TGTGAAGAAACGATCAGCAATCA 58.936 39.130 0.00 0.00 33.65 2.57
1889 1955 4.083855 TGTGTGAAGAAACGATCAGCAATC 60.084 41.667 0.00 0.00 0.00 2.67
1917 1983 6.940298 TCGTAATTCCCTTTCTCTTTTCACAT 59.060 34.615 0.00 0.00 0.00 3.21
1942 2008 4.375272 CATTACTGATGGCACGAGAAGAT 58.625 43.478 0.00 0.00 31.83 2.40
1956 2022 7.028526 AAAGCCAACTTATCAGCCATTACTGA 61.029 38.462 0.00 0.00 42.38 3.41
1981 2047 2.059756 AATGGGAGAGGGGAAAGTGA 57.940 50.000 0.00 0.00 0.00 3.41
2244 2313 1.442520 CATCAAACAAGCCACGCCG 60.443 57.895 0.00 0.00 0.00 6.46
2450 2519 0.250424 TCTCGTCCGACCACACACTA 60.250 55.000 0.00 0.00 0.00 2.74
2456 2525 1.747355 TCCTTATTCTCGTCCGACCAC 59.253 52.381 0.00 0.00 0.00 4.16
2484 2553 4.002982 GACCTGATGAGCACAATGTACAA 58.997 43.478 0.00 0.00 0.00 2.41
2486 2555 3.866651 AGACCTGATGAGCACAATGTAC 58.133 45.455 0.00 0.00 0.00 2.90
2678 2747 0.113580 TTTGGTTTACCTGCCCTCCC 59.886 55.000 0.00 0.00 36.82 4.30
2695 2764 8.245491 ACATTTTGTGTAACTAAAGTTCGGTTT 58.755 29.630 0.00 0.00 44.12 3.27
2731 2807 4.807304 GCCATAAGTCAATGCAAATCTTGG 59.193 41.667 0.00 0.00 0.00 3.61
2863 2939 2.989824 CTCCAGTCCACGTCGGGT 60.990 66.667 0.00 0.00 34.36 5.28
2946 3022 2.412937 GCACAATGTATGCCCCGC 59.587 61.111 0.00 0.00 37.08 6.13
3058 3134 3.540617 GCCCAAAACCTTTGACATGTTT 58.459 40.909 0.00 0.00 33.86 2.83
3067 3143 0.750249 CCTGTTCGCCCAAAACCTTT 59.250 50.000 0.00 0.00 0.00 3.11
3151 3227 1.604593 GCCAGAAAGAAGGGCAGCA 60.605 57.895 0.00 0.00 46.92 4.41
3247 3323 3.223435 GTCGATCTCCTCCTTGGACATA 58.777 50.000 0.00 0.00 40.56 2.29
3301 3377 3.011517 TCCAAGGCCAGCTCCTCC 61.012 66.667 5.01 0.00 34.82 4.30
3400 3476 1.153066 TGCCCGCAACACTTTCTCA 60.153 52.632 0.00 0.00 0.00 3.27
3707 3784 2.029623 GGTGATGCAGCATCCAGATTT 58.970 47.619 28.95 0.00 39.87 2.17
3711 3788 1.153309 TCGGTGATGCAGCATCCAG 60.153 57.895 28.95 20.51 39.87 3.86
3764 3841 8.149647 GGATATGCATATGAAATTTGGAACCAA 58.850 33.333 23.76 1.83 28.67 3.67
3864 3941 3.341823 CTTGTGAGGATTGGTCAGGAAG 58.658 50.000 0.00 0.00 0.00 3.46
3900 3977 0.904865 TCGGATCAGGCCTTGACAGT 60.905 55.000 0.00 0.00 38.99 3.55
4000 4077 2.768834 GCCGTCTAAAAGGAGGCAG 58.231 57.895 0.00 0.00 46.48 4.85
4215 4293 5.278315 GGTTACTAAGTTTGCAAGTTCCCTG 60.278 44.000 0.00 0.00 0.00 4.45
4312 4390 4.836125 TTCTGAAACATGCTTTCTGGTC 57.164 40.909 18.31 1.49 0.00 4.02
4321 4400 6.032094 CACCACAAGATATTCTGAAACATGC 58.968 40.000 0.00 0.00 0.00 4.06
4522 4601 2.483714 GGCTGTGAGGCGATAAATCTCA 60.484 50.000 0.00 0.00 35.45 3.27
4581 4660 9.788889 ATGAGATGCTGAATCTTAAACATGATA 57.211 29.630 0.00 0.00 46.12 2.15
4583 4662 8.515695 AATGAGATGCTGAATCTTAAACATGA 57.484 30.769 0.00 0.00 46.12 3.07
4619 4698 1.035139 CTGCAGGGGATAACCAATGC 58.965 55.000 5.57 9.84 44.23 3.56
4695 4774 5.480422 TGTCAGATAACTGGAACTGAAGCTA 59.520 40.000 0.00 0.00 43.60 3.32
4730 4815 1.339438 TGAGAACAGGGAAGCATCAGC 60.339 52.381 0.00 0.00 42.56 4.26
4817 4902 2.577059 GTGGCGACGATTGGGAGA 59.423 61.111 0.00 0.00 0.00 3.71
5166 5251 2.031163 GTGTCCTTGAGCCAGCGT 59.969 61.111 0.00 0.00 0.00 5.07
5481 5566 2.355363 TTGCTGGAACGTCCGTCG 60.355 61.111 0.00 0.00 40.17 5.12
5491 5576 2.156917 CTGCAACATCTTCTTGCTGGA 58.843 47.619 4.87 0.00 43.76 3.86
5517 5602 2.583441 CGCCCTGAACACCTCCTGA 61.583 63.158 0.00 0.00 0.00 3.86
5568 5653 3.103911 GTCGACAGTGCGAACCCG 61.104 66.667 11.55 0.00 42.55 5.28
5667 5752 1.738099 GTACACCTCGCTGCCACTG 60.738 63.158 0.00 0.00 0.00 3.66
5988 6073 4.466370 TCGATAGTTCTCACCTGTGGAATT 59.534 41.667 0.00 0.81 37.40 2.17
6066 6151 0.108804 GCATCCTCGTTGACTTCCGA 60.109 55.000 0.00 0.00 0.00 4.55
6072 6157 0.798776 CAACCTGCATCCTCGTTGAC 59.201 55.000 0.00 0.00 38.25 3.18
6156 6241 1.153469 GGGCTACAGCAGAGTGAGC 60.153 63.158 3.24 0.00 44.36 4.26
6252 6348 2.213499 CGGAAACAGCAAGAGTTCTGT 58.787 47.619 0.00 0.00 44.64 3.41
6261 6357 2.357637 CTCTTTTGACCGGAAACAGCAA 59.642 45.455 9.46 0.00 0.00 3.91
6299 6395 8.649973 AAAATGCTACCGTATTTTGTGAAAAA 57.350 26.923 0.00 0.00 41.72 1.94
6300 6396 8.649973 AAAAATGCTACCGTATTTTGTGAAAA 57.350 26.923 2.71 0.00 42.21 2.29
6428 6525 0.255890 CCATGTTCCCCGAGGACAAT 59.744 55.000 0.00 0.00 43.90 2.71
6523 6620 1.685421 GCTCCTCAGCAGGTCCTCT 60.685 63.158 0.00 0.00 46.06 3.69
6568 6665 2.836360 GGGCTATCGGACGGGACA 60.836 66.667 0.00 0.00 0.00 4.02
6607 6704 3.571828 GGATCTCATCCGACTTCAGATCA 59.428 47.826 8.96 0.00 40.84 2.92
6752 6849 6.305693 AGTGAAGAAAAGAGAAATGGTTCG 57.694 37.500 0.00 0.00 38.90 3.95
6772 6871 9.920133 AGTGCTCACAAGATTATATATGTAGTG 57.080 33.333 2.63 0.00 0.00 2.74
6823 6930 8.133627 GCATCATCAGCAGTGTCTTAATTATTT 58.866 33.333 0.00 0.00 0.00 1.40
6856 6964 4.311816 AGTTCACAAACATTCAAGCCAG 57.688 40.909 0.00 0.00 37.88 4.85
7069 7177 3.133003 CCAATAAGAGGACGTGATGGACT 59.867 47.826 0.00 0.00 0.00 3.85
7081 7189 3.878778 CCTGACTGGAACCAATAAGAGG 58.121 50.000 0.00 0.00 38.35 3.69
7113 7221 7.592903 GTGTTCTTTTCATTTCTCTTCCATGTC 59.407 37.037 0.00 0.00 0.00 3.06
7317 7425 7.134362 TCCTAATCAGATCATGAGCTTTTCT 57.866 36.000 11.61 0.00 42.53 2.52
7368 7476 1.630223 TGGCATGGTTTCATCTGCAA 58.370 45.000 0.00 0.00 0.00 4.08
7449 7557 7.770801 TCGTTATTACTGATCCTGACAAATG 57.229 36.000 0.00 0.00 0.00 2.32
7536 7644 4.846779 TGTCAAAGGCAATACCAAAGTC 57.153 40.909 0.00 0.00 43.14 3.01
7539 7647 6.716934 TTAGTTGTCAAAGGCAATACCAAA 57.283 33.333 0.00 0.00 43.14 3.28
7541 7649 6.909550 AATTAGTTGTCAAAGGCAATACCA 57.090 33.333 0.00 0.00 43.14 3.25
7542 7650 8.051901 ACTAATTAGTTGTCAAAGGCAATACC 57.948 34.615 12.50 0.00 33.12 2.73
7543 7651 9.983804 GTACTAATTAGTTGTCAAAGGCAATAC 57.016 33.333 22.66 6.55 37.73 1.89
7544 7652 9.953565 AGTACTAATTAGTTGTCAAAGGCAATA 57.046 29.630 22.66 0.00 37.73 1.90
7546 7654 8.685838 AAGTACTAATTAGTTGTCAAAGGCAA 57.314 30.769 22.66 0.00 37.73 4.52
7547 7655 8.685838 AAAGTACTAATTAGTTGTCAAAGGCA 57.314 30.769 22.66 0.00 37.73 4.75
7565 8819 5.368816 ACTCCCTGTCAGGTTTTAAAGTACT 59.631 40.000 17.85 0.00 31.93 2.73
7567 8821 5.899631 ACTCCCTGTCAGGTTTTAAAGTA 57.100 39.130 17.85 0.00 31.93 2.24
7580 8834 1.272769 ACGTGCTTCTAACTCCCTGTC 59.727 52.381 0.00 0.00 0.00 3.51
7709 8963 3.247006 TGAGGTTCCATAGTTCGAAGC 57.753 47.619 0.00 0.00 36.88 3.86
7748 9002 7.690952 ACACGGAATAAATGGCTTTAGTAAA 57.309 32.000 0.00 0.00 30.61 2.01
7757 9011 3.230743 AGCAAACACGGAATAAATGGC 57.769 42.857 0.00 0.00 0.00 4.40
7768 9022 3.673746 TCTGTCAGAAAAGCAAACACG 57.326 42.857 0.00 0.00 0.00 4.49
7849 9103 8.186709 ACATGTTCTCATCTCTGGAAATTTTT 57.813 30.769 0.00 0.00 31.15 1.94
7854 9108 5.474532 CCAAACATGTTCTCATCTCTGGAAA 59.525 40.000 12.39 0.00 30.53 3.13
7864 9123 5.476599 CCTTGTTATCCCAAACATGTTCTCA 59.523 40.000 12.39 0.00 39.04 3.27
7887 9146 5.060506 CCAAACCACCTTCCAAATTTAACC 58.939 41.667 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.