Multiple sequence alignment - TraesCS3A01G423800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G423800 chr3A 100.000 2768 0 0 1 2768 666223677 666220910 0.000000e+00 5112.0
1 TraesCS3A01G423800 chr3A 90.751 173 12 3 1598 1768 482093309 482093479 7.710000e-56 228.0
2 TraesCS3A01G423800 chr3A 88.889 45 5 0 1458 1502 482093157 482093201 3.850000e-04 56.5
3 TraesCS3A01G423800 chr3D 88.431 1504 120 30 331 1820 531681269 531679806 0.000000e+00 1764.0
4 TraesCS3A01G423800 chr3D 88.869 566 38 15 1880 2435 531679548 531678998 0.000000e+00 673.0
5 TraesCS3A01G423800 chr3D 90.751 173 12 3 1598 1768 361777144 361777314 7.710000e-56 228.0
6 TraesCS3A01G423800 chr3D 89.286 112 8 1 1 108 531681668 531681557 1.340000e-28 137.0
7 TraesCS3A01G423800 chr3D 88.889 45 5 0 1458 1502 361776998 361777042 3.850000e-04 56.5
8 TraesCS3A01G423800 chr3B 86.189 1535 135 42 272 1768 703297933 703296438 0.000000e+00 1589.0
9 TraesCS3A01G423800 chr3B 78.935 864 147 20 952 1806 703129926 703129089 3.110000e-154 555.0
10 TraesCS3A01G423800 chr3B 89.041 438 33 12 1848 2283 703126467 703126043 1.890000e-146 529.0
11 TraesCS3A01G423800 chr3B 88.182 330 29 5 1899 2220 703296305 703295978 4.320000e-103 385.0
12 TraesCS3A01G423800 chr3B 91.667 168 10 3 1603 1768 471485754 471485919 2.140000e-56 230.0
13 TraesCS3A01G423800 chr3B 85.276 163 17 6 5 164 703299308 703299150 7.930000e-36 161.0
14 TraesCS3A01G423800 chr3B 88.710 62 6 1 168 229 703299123 703299063 1.060000e-09 75.0
15 TraesCS3A01G423800 chr3B 91.111 45 4 0 1458 1502 471485612 471485656 8.280000e-06 62.1
16 TraesCS3A01G423800 chr7A 93.450 229 12 3 2540 2768 548048667 548048442 1.230000e-88 337.0
17 TraesCS3A01G423800 chr7A 86.061 165 19 4 1607 1768 247251728 247251565 1.020000e-39 174.0
18 TraesCS3A01G423800 chr7D 85.455 165 20 4 1607 1768 234348144 234347981 4.740000e-38 169.0
19 TraesCS3A01G423800 chr7B 85.455 165 20 4 1607 1768 206337090 206336927 4.740000e-38 169.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G423800 chr3A 666220910 666223677 2767 True 5112.0 5112 100.00000 1 2768 1 chr3A.!!$R1 2767
1 TraesCS3A01G423800 chr3D 531678998 531681668 2670 True 858.0 1764 88.86200 1 2435 3 chr3D.!!$R1 2434
2 TraesCS3A01G423800 chr3B 703295978 703299308 3330 True 552.5 1589 87.08925 5 2220 4 chr3B.!!$R2 2215
3 TraesCS3A01G423800 chr3B 703126043 703129926 3883 True 542.0 555 83.98800 952 2283 2 chr3B.!!$R1 1331

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
220 283 0.308993 GAAATAGATGCTGGCGGTGC 59.691 55.0 0.0 0.0 0.00 5.01 F
1509 2756 0.036952 AGCAGACGGACATCCACTTG 60.037 55.0 0.0 0.0 35.14 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1581 2828 0.737715 CTTCTTCCTCTTCGTGCCGG 60.738 60.0 0.0 0.0 0.0 6.13 R
2469 6548 0.032615 CCCAGAGCCAGAGGAGTACT 60.033 60.0 0.0 0.0 0.0 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.717898 GTACGCTCGCTCGCTACG 60.718 66.667 0.00 0.00 0.00 3.51
23 24 3.933498 TACGCTCGCTCGCTACGG 61.933 66.667 0.00 0.00 0.00 4.02
56 58 6.529220 AGTAGAGATACAATCAATGGCTTCC 58.471 40.000 0.00 0.00 0.00 3.46
99 105 2.499520 CAACCAACGCGCGTCATG 60.500 61.111 37.77 30.00 0.00 3.07
125 156 1.530419 ACATGCAGGCCAAAACCGA 60.530 52.632 5.01 0.00 33.69 4.69
135 171 0.879090 CCAAAACCGAGTTAGGTGCC 59.121 55.000 0.00 0.00 45.21 5.01
141 177 2.998949 GAGTTAGGTGCCCAGGGG 59.001 66.667 7.91 3.48 38.57 4.79
145 181 2.235761 TTAGGTGCCCAGGGGTTCC 61.236 63.158 7.91 9.62 37.65 3.62
164 200 1.664016 CCGTTCAGCAATGTTCAGTGC 60.664 52.381 15.78 15.78 41.22 4.40
165 201 1.664016 CGTTCAGCAATGTTCAGTGCC 60.664 52.381 19.02 5.61 41.88 5.01
166 202 1.337703 GTTCAGCAATGTTCAGTGCCA 59.662 47.619 19.02 6.10 41.88 4.92
178 241 4.819630 TGTTCAGTGCCAAAGGTAAACTAG 59.180 41.667 0.00 0.00 0.00 2.57
183 246 3.188667 GTGCCAAAGGTAAACTAGAGCAC 59.811 47.826 0.00 0.00 40.95 4.40
212 275 3.937706 GACAGTGCACAGAAATAGATGCT 59.062 43.478 21.04 0.00 38.90 3.79
213 276 3.688185 ACAGTGCACAGAAATAGATGCTG 59.312 43.478 21.04 5.97 38.90 4.41
214 277 3.064958 CAGTGCACAGAAATAGATGCTGG 59.935 47.826 21.04 0.00 38.90 4.85
215 278 2.019249 TGCACAGAAATAGATGCTGGC 58.981 47.619 0.00 0.00 38.90 4.85
217 280 1.600957 CACAGAAATAGATGCTGGCGG 59.399 52.381 0.00 0.00 34.05 6.13
218 281 1.210478 ACAGAAATAGATGCTGGCGGT 59.790 47.619 0.00 0.00 34.05 5.68
220 283 0.308993 GAAATAGATGCTGGCGGTGC 59.691 55.000 0.00 0.00 0.00 5.01
221 284 1.439353 AAATAGATGCTGGCGGTGCG 61.439 55.000 0.00 0.00 0.00 5.34
222 285 2.310327 AATAGATGCTGGCGGTGCGA 62.310 55.000 0.00 0.00 0.00 5.10
238 342 1.969103 GCGAAGTGCAAGTTCATTCC 58.031 50.000 9.98 0.00 46.63 3.01
239 343 1.537202 GCGAAGTGCAAGTTCATTCCT 59.463 47.619 9.98 0.00 46.63 3.36
251 355 3.960102 AGTTCATTCCTTGGCAAGAAACA 59.040 39.130 28.18 9.20 0.00 2.83
254 358 5.350504 TCATTCCTTGGCAAGAAACAAAA 57.649 34.783 28.18 11.96 0.00 2.44
255 359 5.738909 TCATTCCTTGGCAAGAAACAAAAA 58.261 33.333 28.18 10.39 0.00 1.94
256 360 5.816777 TCATTCCTTGGCAAGAAACAAAAAG 59.183 36.000 28.18 8.30 0.00 2.27
257 361 4.817318 TCCTTGGCAAGAAACAAAAAGT 57.183 36.364 28.18 0.00 0.00 2.66
258 362 5.159273 TCCTTGGCAAGAAACAAAAAGTT 57.841 34.783 28.18 0.00 43.89 2.66
259 363 5.175127 TCCTTGGCAAGAAACAAAAAGTTC 58.825 37.500 28.18 0.00 40.26 3.01
260 364 4.934602 CCTTGGCAAGAAACAAAAAGTTCA 59.065 37.500 28.18 0.00 40.26 3.18
261 365 5.063817 CCTTGGCAAGAAACAAAAAGTTCAG 59.936 40.000 28.18 1.84 40.26 3.02
263 367 5.546526 TGGCAAGAAACAAAAAGTTCAGTT 58.453 33.333 0.00 0.00 40.26 3.16
264 368 5.637387 TGGCAAGAAACAAAAAGTTCAGTTC 59.363 36.000 0.00 0.00 40.26 3.01
265 369 5.637387 GGCAAGAAACAAAAAGTTCAGTTCA 59.363 36.000 0.00 0.00 40.26 3.18
266 370 6.183360 GGCAAGAAACAAAAAGTTCAGTTCAG 60.183 38.462 0.00 0.00 40.26 3.02
268 372 7.619982 GCAAGAAACAAAAAGTTCAGTTCAGTG 60.620 37.037 0.00 0.00 40.26 3.66
269 373 6.981722 AGAAACAAAAAGTTCAGTTCAGTGT 58.018 32.000 0.00 0.00 40.26 3.55
271 375 5.059404 ACAAAAAGTTCAGTTCAGTGTGG 57.941 39.130 0.00 0.00 0.00 4.17
272 376 4.522789 ACAAAAAGTTCAGTTCAGTGTGGT 59.477 37.500 0.00 0.00 0.00 4.16
273 377 4.965119 AAAAGTTCAGTTCAGTGTGGTC 57.035 40.909 0.00 0.00 0.00 4.02
274 378 2.622064 AGTTCAGTTCAGTGTGGTCC 57.378 50.000 0.00 0.00 0.00 4.46
275 379 1.202533 AGTTCAGTTCAGTGTGGTCCG 60.203 52.381 0.00 0.00 0.00 4.79
279 1477 1.330521 CAGTTCAGTGTGGTCCGTTTG 59.669 52.381 0.00 0.00 0.00 2.93
282 1480 2.203294 AGTGTGGTCCGTTTGCCC 60.203 61.111 0.00 0.00 0.00 5.36
283 1481 2.517402 GTGTGGTCCGTTTGCCCA 60.517 61.111 0.00 0.00 0.00 5.36
295 1493 2.690653 TTTGCCCACCCAAGACCGAG 62.691 60.000 0.00 0.00 0.00 4.63
330 1529 1.775385 TCGATGGAGGTGCATGTAGA 58.225 50.000 0.00 0.00 0.00 2.59
331 1530 2.319844 TCGATGGAGGTGCATGTAGAT 58.680 47.619 0.00 0.00 0.00 1.98
333 1532 2.224137 CGATGGAGGTGCATGTAGATGT 60.224 50.000 1.37 0.00 31.50 3.06
335 1534 4.564041 GATGGAGGTGCATGTAGATGTAG 58.436 47.826 1.37 0.00 31.50 2.74
360 1562 1.035932 ACTTCTCATGCATGCCTGGC 61.036 55.000 22.25 12.87 0.00 4.85
362 1564 2.123854 CTCATGCATGCCTGGCCT 60.124 61.111 22.25 2.69 0.00 5.19
363 1565 2.441348 TCATGCATGCCTGGCCTG 60.441 61.111 22.25 17.94 0.00 4.85
364 1566 3.536917 CATGCATGCCTGGCCTGG 61.537 66.667 23.89 23.89 0.00 4.45
365 1567 4.853142 ATGCATGCCTGGCCTGGG 62.853 66.667 28.23 19.17 0.00 4.45
446 1648 3.604202 CGCATCACGTACGTCCGC 61.604 66.667 19.94 19.02 36.87 5.54
447 1649 2.202570 GCATCACGTACGTCCGCT 60.203 61.111 19.94 0.00 0.00 5.52
449 1651 1.933041 CATCACGTACGTCCGCTCG 60.933 63.158 19.94 6.37 0.00 5.03
450 1652 3.729906 ATCACGTACGTCCGCTCGC 62.730 63.158 19.94 0.00 0.00 5.03
476 1678 4.498009 GCATGCACACTGTTCAAGTACTTT 60.498 41.667 14.21 0.00 36.83 2.66
478 1680 6.724263 CATGCACACTGTTCAAGTACTTTTA 58.276 36.000 5.07 0.00 36.83 1.52
512 1714 5.011635 AGTTTTGAAAACCCACTGTTCAAGT 59.988 36.000 16.45 0.00 41.06 3.16
587 1793 3.676172 TGCAAGTACGTACCGATTTTCAG 59.324 43.478 21.80 0.66 0.00 3.02
633 1839 6.846283 GCTATTCCGTCGTCAAAATTTAGATG 59.154 38.462 0.00 0.00 0.00 2.90
642 1851 5.569059 CGTCAAAATTTAGATGACAAGTGGC 59.431 40.000 17.39 0.00 42.76 5.01
649 1858 3.788227 AGATGACAAGTGGCCAAACTA 57.212 42.857 7.24 0.00 0.00 2.24
678 1887 8.265165 AGTACAGGATTTCGAAATAGTTTTCC 57.735 34.615 22.78 18.52 38.40 3.13
679 1888 7.881232 AGTACAGGATTTCGAAATAGTTTTCCA 59.119 33.333 22.78 2.38 38.40 3.53
687 1896 3.617263 CGAAATAGTTTTCCAGACCTCCG 59.383 47.826 0.00 0.00 38.40 4.63
689 1898 2.019807 TAGTTTTCCAGACCTCCGGT 57.980 50.000 0.00 0.00 39.44 5.28
711 1920 5.321516 GTGATTCCGTCGTCAAATTTTAGG 58.678 41.667 0.00 0.00 0.00 2.69
746 1955 4.331968 CAAATTACTCCACTGCCCAGTAA 58.668 43.478 0.00 0.00 40.20 2.24
750 1959 2.546899 ACTCCACTGCCCAGTAACATA 58.453 47.619 0.00 0.00 40.20 2.29
796 2005 2.813908 GACTTAGCGTGGCACCCG 60.814 66.667 12.86 2.06 0.00 5.28
806 2015 2.041686 TGGCACCCGGCGTAATTTC 61.042 57.895 6.01 0.00 46.16 2.17
931 2140 4.154347 CAGCCCGCCTCTCTGTCC 62.154 72.222 0.00 0.00 0.00 4.02
932 2141 4.390556 AGCCCGCCTCTCTGTCCT 62.391 66.667 0.00 0.00 0.00 3.85
947 2156 2.125912 CCTCTCTCAACCACCGCG 60.126 66.667 0.00 0.00 0.00 6.46
1121 2365 4.736631 CGACGACGACAGCGCAGA 62.737 66.667 11.47 0.00 42.48 4.26
1315 2559 3.080121 CCTCCCCGAGAAGCAGCT 61.080 66.667 0.00 0.00 0.00 4.24
1327 2571 2.028020 AGAAGCAGCTACAAGTACCACC 60.028 50.000 0.00 0.00 0.00 4.61
1328 2572 0.613777 AGCAGCTACAAGTACCACCC 59.386 55.000 0.00 0.00 0.00 4.61
1329 2573 0.739813 GCAGCTACAAGTACCACCCG 60.740 60.000 0.00 0.00 0.00 5.28
1409 2653 1.373371 TCGACGACGACGAGGAGAA 60.373 57.895 17.84 0.00 43.81 2.87
1427 2671 2.027377 AGAACGACGTAGAAGAGGAGGA 60.027 50.000 0.00 0.00 0.00 3.71
1428 2672 1.736612 ACGACGTAGAAGAGGAGGAC 58.263 55.000 0.00 0.00 0.00 3.85
1430 2674 1.015868 GACGTAGAAGAGGAGGACGG 58.984 60.000 0.00 0.00 37.83 4.79
1432 2676 1.015868 CGTAGAAGAGGAGGACGGAC 58.984 60.000 0.00 0.00 0.00 4.79
1437 2681 0.680061 AAGAGGAGGACGGACACAAC 59.320 55.000 0.00 0.00 0.00 3.32
1440 2684 1.372623 GGAGGACGGACACAACGAC 60.373 63.158 0.00 0.00 34.93 4.34
1444 2688 2.354305 ACGGACACAACGACGAGC 60.354 61.111 0.00 0.00 34.93 5.03
1445 2689 3.103911 CGGACACAACGACGAGCC 61.104 66.667 0.00 0.00 0.00 4.70
1446 2690 2.338984 GGACACAACGACGAGCCT 59.661 61.111 0.00 0.00 0.00 4.58
1509 2756 0.036952 AGCAGACGGACATCCACTTG 60.037 55.000 0.00 0.00 35.14 3.16
1554 2801 2.512286 CAGTGCGGCATGGTCGAT 60.512 61.111 5.72 0.00 29.41 3.59
1556 2803 2.819595 GTGCGGCATGGTCGATGT 60.820 61.111 5.72 0.00 34.14 3.06
1581 2828 4.736896 GAGGACGGCCACGGTGAC 62.737 72.222 11.69 0.00 46.48 3.67
1758 3008 2.268796 TCATCCAGGACATCCTCCAA 57.731 50.000 0.00 0.00 46.65 3.53
1787 3037 0.545171 ACTGGATCCTCTGCCATGTG 59.455 55.000 14.23 0.00 32.89 3.21
1789 3039 1.890979 GGATCCTCTGCCATGTGCG 60.891 63.158 3.84 0.00 45.60 5.34
1810 3060 4.792106 GCATGTCGCCCATTGTTC 57.208 55.556 0.00 0.00 32.94 3.18
1811 3061 1.882311 GCATGTCGCCCATTGTTCA 59.118 52.632 0.00 0.00 32.94 3.18
1812 3062 0.179156 GCATGTCGCCCATTGTTCAG 60.179 55.000 0.00 0.00 32.94 3.02
1813 3063 1.452110 CATGTCGCCCATTGTTCAGA 58.548 50.000 0.00 0.00 0.00 3.27
1814 3064 1.131126 CATGTCGCCCATTGTTCAGAC 59.869 52.381 0.00 0.00 0.00 3.51
1815 3065 0.107643 TGTCGCCCATTGTTCAGACA 59.892 50.000 0.00 0.00 36.43 3.41
1816 3066 1.271325 TGTCGCCCATTGTTCAGACAT 60.271 47.619 0.00 0.00 35.29 3.06
1817 3067 1.812571 GTCGCCCATTGTTCAGACATT 59.187 47.619 0.00 0.00 35.29 2.71
1823 3073 3.498927 CATTGTTCAGACATTGGAGCC 57.501 47.619 0.00 0.00 34.87 4.70
1824 3074 2.957402 TTGTTCAGACATTGGAGCCT 57.043 45.000 0.00 0.00 35.29 4.58
1825 3075 2.189594 TGTTCAGACATTGGAGCCTG 57.810 50.000 0.00 0.00 0.00 4.85
1826 3076 1.421268 TGTTCAGACATTGGAGCCTGT 59.579 47.619 0.00 0.00 0.00 4.00
1827 3077 2.637382 TGTTCAGACATTGGAGCCTGTA 59.363 45.455 0.00 0.00 0.00 2.74
1828 3078 3.072330 TGTTCAGACATTGGAGCCTGTAA 59.928 43.478 0.00 0.00 0.00 2.41
1834 5657 6.767902 TCAGACATTGGAGCCTGTAATAATTC 59.232 38.462 0.00 0.00 0.00 2.17
1840 5663 4.142116 TGGAGCCTGTAATAATTCGTTCGA 60.142 41.667 0.00 0.00 0.00 3.71
1877 5917 2.917933 TGAACAGTTGGGACTTGTGAG 58.082 47.619 0.00 0.00 32.54 3.51
1878 5918 1.604278 GAACAGTTGGGACTTGTGAGC 59.396 52.381 0.00 0.00 32.54 4.26
1881 5921 0.249911 AGTTGGGACTTGTGAGCGAC 60.250 55.000 0.00 0.00 29.87 5.19
1882 5922 0.249911 GTTGGGACTTGTGAGCGACT 60.250 55.000 0.00 0.00 0.00 4.18
1886 5926 1.634702 GGACTTGTGAGCGACTGATC 58.365 55.000 0.00 0.00 0.00 2.92
1939 5999 3.252400 TCGGACGCACATTAATTTACGT 58.748 40.909 0.00 0.00 36.30 3.57
1948 6008 6.406896 CGCACATTAATTTACGTACATGTGAC 59.593 38.462 22.66 16.35 42.69 3.67
1995 6056 0.935366 GATCGTTCGATCCACTCCGC 60.935 60.000 20.21 0.00 36.08 5.54
2008 6069 1.135402 CACTCCGCTTTGTTTATGGCC 60.135 52.381 0.00 0.00 0.00 5.36
2099 6160 6.851609 TGGATTGTTATGTTCATAACAGTGC 58.148 36.000 27.73 27.73 45.95 4.40
2202 6269 3.105782 CGTCTTGCGCGCTTCTGA 61.106 61.111 33.29 20.36 0.00 3.27
2221 6288 1.401905 GATTTGATGGGGTCTTGACGC 59.598 52.381 8.98 8.98 0.00 5.19
2228 6295 1.227853 GGGTCTTGACGCCTTGTGT 60.228 57.895 6.56 0.00 0.00 3.72
2229 6296 0.034337 GGGTCTTGACGCCTTGTGTA 59.966 55.000 6.56 0.00 0.00 2.90
2234 6301 4.453136 GGTCTTGACGCCTTGTGTATTTTA 59.547 41.667 0.00 0.00 0.00 1.52
2240 6307 9.400638 CTTGACGCCTTGTGTATTTTATTTTTA 57.599 29.630 0.00 0.00 0.00 1.52
2301 6371 2.047179 GACCGTGAAGGAGGGTGC 60.047 66.667 0.00 0.00 43.17 5.01
2335 6405 2.682155 TGTGTGCACTGTACAAGTCA 57.318 45.000 19.41 0.00 36.83 3.41
2342 6412 4.209288 GTGCACTGTACAAGTCACTGTTAG 59.791 45.833 10.32 0.00 36.83 2.34
2347 6418 7.413657 GCACTGTACAAGTCACTGTTAGAAAAA 60.414 37.037 0.00 0.00 36.83 1.94
2348 6419 8.612619 CACTGTACAAGTCACTGTTAGAAAAAT 58.387 33.333 0.00 0.00 36.83 1.82
2412 6491 4.726825 AGCATCTACTATTTGAAAGGGGGA 59.273 41.667 0.00 0.00 0.00 4.81
2435 6514 2.456577 AGTTGGTATTGGCAATGGGAC 58.543 47.619 22.57 12.52 0.00 4.46
2436 6515 2.042979 AGTTGGTATTGGCAATGGGACT 59.957 45.455 22.57 16.17 0.00 3.85
2437 6516 2.142356 TGGTATTGGCAATGGGACTG 57.858 50.000 22.57 0.00 0.00 3.51
2438 6517 1.638070 TGGTATTGGCAATGGGACTGA 59.362 47.619 22.57 0.00 0.00 3.41
2439 6518 2.024414 GGTATTGGCAATGGGACTGAC 58.976 52.381 22.57 10.38 0.00 3.51
2440 6519 2.620367 GGTATTGGCAATGGGACTGACA 60.620 50.000 22.57 0.00 0.00 3.58
2441 6520 1.549203 ATTGGCAATGGGACTGACAC 58.451 50.000 12.82 0.00 29.26 3.67
2442 6521 0.184692 TTGGCAATGGGACTGACACA 59.815 50.000 0.00 0.00 29.26 3.72
2443 6522 0.250858 TGGCAATGGGACTGACACAG 60.251 55.000 0.00 0.00 34.42 3.66
2444 6523 0.036732 GGCAATGGGACTGACACAGA 59.963 55.000 5.76 0.00 34.42 3.41
2445 6524 1.340405 GGCAATGGGACTGACACAGAT 60.340 52.381 5.76 0.00 34.42 2.90
2446 6525 2.440409 GCAATGGGACTGACACAGATT 58.560 47.619 5.76 0.00 34.42 2.40
2447 6526 2.821969 GCAATGGGACTGACACAGATTT 59.178 45.455 5.76 0.00 34.42 2.17
2448 6527 3.119708 GCAATGGGACTGACACAGATTTC 60.120 47.826 5.76 0.00 34.42 2.17
2449 6528 4.330250 CAATGGGACTGACACAGATTTCT 58.670 43.478 5.76 0.00 34.42 2.52
2461 6540 3.670311 CAGATTTCTGGCGTGATTCTG 57.330 47.619 0.00 0.00 40.20 3.02
2462 6541 2.353889 CAGATTTCTGGCGTGATTCTGG 59.646 50.000 0.00 0.00 40.20 3.86
2463 6542 2.026822 AGATTTCTGGCGTGATTCTGGT 60.027 45.455 0.00 0.00 0.00 4.00
2464 6543 1.522668 TTTCTGGCGTGATTCTGGTG 58.477 50.000 0.00 0.00 0.00 4.17
2465 6544 0.396435 TTCTGGCGTGATTCTGGTGT 59.604 50.000 0.00 0.00 0.00 4.16
2466 6545 0.320683 TCTGGCGTGATTCTGGTGTG 60.321 55.000 0.00 0.00 0.00 3.82
2467 6546 1.300971 CTGGCGTGATTCTGGTGTGG 61.301 60.000 0.00 0.00 0.00 4.17
2468 6547 1.302511 GGCGTGATTCTGGTGTGGT 60.303 57.895 0.00 0.00 0.00 4.16
2469 6548 0.036765 GGCGTGATTCTGGTGTGGTA 60.037 55.000 0.00 0.00 0.00 3.25
2470 6549 1.359848 GCGTGATTCTGGTGTGGTAG 58.640 55.000 0.00 0.00 0.00 3.18
2471 6550 1.337823 GCGTGATTCTGGTGTGGTAGT 60.338 52.381 0.00 0.00 0.00 2.73
2472 6551 2.094390 GCGTGATTCTGGTGTGGTAGTA 60.094 50.000 0.00 0.00 0.00 1.82
2473 6552 3.508762 CGTGATTCTGGTGTGGTAGTAC 58.491 50.000 0.00 0.00 0.00 2.73
2474 6553 3.192844 CGTGATTCTGGTGTGGTAGTACT 59.807 47.826 0.00 0.00 0.00 2.73
2475 6554 4.674623 CGTGATTCTGGTGTGGTAGTACTC 60.675 50.000 0.00 0.00 0.00 2.59
2476 6555 3.767673 TGATTCTGGTGTGGTAGTACTCC 59.232 47.826 0.00 1.20 35.36 3.85
2477 6556 3.537795 TTCTGGTGTGGTAGTACTCCT 57.462 47.619 0.00 0.00 35.71 3.69
2478 6557 3.083122 TCTGGTGTGGTAGTACTCCTC 57.917 52.381 0.00 2.74 35.71 3.71
2479 6558 2.648304 TCTGGTGTGGTAGTACTCCTCT 59.352 50.000 0.00 0.00 35.71 3.69
2480 6559 2.755655 CTGGTGTGGTAGTACTCCTCTG 59.244 54.545 0.00 0.00 35.71 3.35
2481 6560 2.100989 GGTGTGGTAGTACTCCTCTGG 58.899 57.143 0.00 0.00 32.78 3.86
2482 6561 1.477295 GTGTGGTAGTACTCCTCTGGC 59.523 57.143 0.00 0.00 0.00 4.85
2483 6562 1.358103 TGTGGTAGTACTCCTCTGGCT 59.642 52.381 0.00 0.00 0.00 4.75
2484 6563 2.025898 GTGGTAGTACTCCTCTGGCTC 58.974 57.143 0.00 0.00 0.00 4.70
2485 6564 1.923850 TGGTAGTACTCCTCTGGCTCT 59.076 52.381 0.00 0.00 0.00 4.09
2486 6565 2.303175 GGTAGTACTCCTCTGGCTCTG 58.697 57.143 0.00 0.00 0.00 3.35
2487 6566 2.303175 GTAGTACTCCTCTGGCTCTGG 58.697 57.143 0.00 0.00 0.00 3.86
2488 6567 0.032615 AGTACTCCTCTGGCTCTGGG 60.033 60.000 0.00 0.00 0.00 4.45
2489 6568 0.324830 GTACTCCTCTGGCTCTGGGT 60.325 60.000 0.00 0.00 0.00 4.51
2490 6569 1.063867 GTACTCCTCTGGCTCTGGGTA 60.064 57.143 0.00 0.00 0.00 3.69
2491 6570 0.639392 ACTCCTCTGGCTCTGGGTAT 59.361 55.000 0.00 0.00 0.00 2.73
2492 6571 1.008938 ACTCCTCTGGCTCTGGGTATT 59.991 52.381 0.00 0.00 0.00 1.89
2493 6572 2.247635 ACTCCTCTGGCTCTGGGTATTA 59.752 50.000 0.00 0.00 0.00 0.98
2494 6573 3.116551 ACTCCTCTGGCTCTGGGTATTAT 60.117 47.826 0.00 0.00 0.00 1.28
2495 6574 3.511477 TCCTCTGGCTCTGGGTATTATC 58.489 50.000 0.00 0.00 0.00 1.75
2496 6575 3.142977 TCCTCTGGCTCTGGGTATTATCT 59.857 47.826 0.00 0.00 0.00 1.98
2497 6576 3.906846 CCTCTGGCTCTGGGTATTATCTT 59.093 47.826 0.00 0.00 0.00 2.40
2498 6577 4.262808 CCTCTGGCTCTGGGTATTATCTTG 60.263 50.000 0.00 0.00 0.00 3.02
2499 6578 3.071602 TCTGGCTCTGGGTATTATCTTGC 59.928 47.826 0.00 0.00 0.00 4.01
2500 6579 2.106511 TGGCTCTGGGTATTATCTTGCC 59.893 50.000 0.00 0.00 38.42 4.52
2501 6580 2.373502 GGCTCTGGGTATTATCTTGCCT 59.626 50.000 0.00 0.00 35.44 4.75
2502 6581 3.406764 GCTCTGGGTATTATCTTGCCTG 58.593 50.000 0.00 0.00 0.00 4.85
2503 6582 3.808618 GCTCTGGGTATTATCTTGCCTGG 60.809 52.174 0.00 0.00 0.00 4.45
2504 6583 3.392616 CTCTGGGTATTATCTTGCCTGGT 59.607 47.826 0.00 0.00 0.00 4.00
2505 6584 3.785887 TCTGGGTATTATCTTGCCTGGTT 59.214 43.478 0.00 0.00 0.00 3.67
2506 6585 4.229582 TCTGGGTATTATCTTGCCTGGTTT 59.770 41.667 0.00 0.00 0.00 3.27
2507 6586 5.430417 TCTGGGTATTATCTTGCCTGGTTTA 59.570 40.000 0.00 0.00 0.00 2.01
2508 6587 6.102615 TCTGGGTATTATCTTGCCTGGTTTAT 59.897 38.462 0.00 0.00 0.00 1.40
2509 6588 7.293771 TCTGGGTATTATCTTGCCTGGTTTATA 59.706 37.037 0.00 0.00 0.00 0.98
2510 6589 7.817440 TGGGTATTATCTTGCCTGGTTTATAA 58.183 34.615 0.00 0.00 0.00 0.98
2511 6590 7.942341 TGGGTATTATCTTGCCTGGTTTATAAG 59.058 37.037 0.00 0.00 0.00 1.73
2512 6591 8.161425 GGGTATTATCTTGCCTGGTTTATAAGA 58.839 37.037 0.00 0.00 32.57 2.10
2513 6592 9.220767 GGTATTATCTTGCCTGGTTTATAAGAG 57.779 37.037 0.00 0.00 31.67 2.85
2514 6593 9.998106 GTATTATCTTGCCTGGTTTATAAGAGA 57.002 33.333 0.00 0.00 31.67 3.10
2516 6595 9.732130 ATTATCTTGCCTGGTTTATAAGAGATC 57.268 33.333 0.00 0.00 31.67 2.75
2517 6596 6.560003 TCTTGCCTGGTTTATAAGAGATCA 57.440 37.500 0.00 0.00 0.00 2.92
2518 6597 6.586344 TCTTGCCTGGTTTATAAGAGATCAG 58.414 40.000 0.00 0.00 0.00 2.90
2519 6598 5.957771 TGCCTGGTTTATAAGAGATCAGT 57.042 39.130 0.00 0.00 0.00 3.41
2520 6599 6.313519 TGCCTGGTTTATAAGAGATCAGTT 57.686 37.500 0.00 0.00 0.00 3.16
2521 6600 6.721318 TGCCTGGTTTATAAGAGATCAGTTT 58.279 36.000 0.00 0.00 0.00 2.66
2522 6601 6.599244 TGCCTGGTTTATAAGAGATCAGTTTG 59.401 38.462 0.00 0.00 0.00 2.93
2523 6602 6.038714 GCCTGGTTTATAAGAGATCAGTTTGG 59.961 42.308 0.00 0.00 0.00 3.28
2524 6603 7.338710 CCTGGTTTATAAGAGATCAGTTTGGA 58.661 38.462 0.00 0.00 0.00 3.53
2525 6604 7.995488 CCTGGTTTATAAGAGATCAGTTTGGAT 59.005 37.037 0.00 0.00 0.00 3.41
2535 6614 9.753674 AAGAGATCAGTTTGGATATTGGTAAAA 57.246 29.630 0.00 0.00 0.00 1.52
2536 6615 9.401058 AGAGATCAGTTTGGATATTGGTAAAAG 57.599 33.333 0.00 0.00 0.00 2.27
2537 6616 9.396022 GAGATCAGTTTGGATATTGGTAAAAGA 57.604 33.333 0.00 0.00 0.00 2.52
2538 6617 9.753674 AGATCAGTTTGGATATTGGTAAAAGAA 57.246 29.630 0.00 0.00 0.00 2.52
2587 6666 6.088824 TCGTAGTCGAAGTCTTAAATGAACC 58.911 40.000 0.00 0.00 43.34 3.62
2588 6667 5.287992 CGTAGTCGAAGTCTTAAATGAACCC 59.712 44.000 0.00 0.00 39.71 4.11
2589 6668 5.485209 AGTCGAAGTCTTAAATGAACCCT 57.515 39.130 0.00 0.00 0.00 4.34
2590 6669 6.600882 AGTCGAAGTCTTAAATGAACCCTA 57.399 37.500 0.00 0.00 0.00 3.53
2591 6670 7.001099 AGTCGAAGTCTTAAATGAACCCTAA 57.999 36.000 0.00 0.00 0.00 2.69
2592 6671 7.447594 AGTCGAAGTCTTAAATGAACCCTAAA 58.552 34.615 0.00 0.00 0.00 1.85
2593 6672 7.387122 AGTCGAAGTCTTAAATGAACCCTAAAC 59.613 37.037 0.00 0.00 0.00 2.01
2594 6673 7.387122 GTCGAAGTCTTAAATGAACCCTAAACT 59.613 37.037 0.00 0.00 0.00 2.66
2595 6674 7.601508 TCGAAGTCTTAAATGAACCCTAAACTC 59.398 37.037 0.00 0.00 0.00 3.01
2596 6675 7.148457 CGAAGTCTTAAATGAACCCTAAACTCC 60.148 40.741 0.00 0.00 0.00 3.85
2597 6676 7.086685 AGTCTTAAATGAACCCTAAACTCCA 57.913 36.000 0.00 0.00 0.00 3.86
2598 6677 7.523415 AGTCTTAAATGAACCCTAAACTCCAA 58.477 34.615 0.00 0.00 0.00 3.53
2599 6678 8.002459 AGTCTTAAATGAACCCTAAACTCCAAA 58.998 33.333 0.00 0.00 0.00 3.28
2600 6679 8.803235 GTCTTAAATGAACCCTAAACTCCAAAT 58.197 33.333 0.00 0.00 0.00 2.32
2601 6680 9.020731 TCTTAAATGAACCCTAAACTCCAAATC 57.979 33.333 0.00 0.00 0.00 2.17
2602 6681 6.605471 AAATGAACCCTAAACTCCAAATCC 57.395 37.500 0.00 0.00 0.00 3.01
2603 6682 4.042271 TGAACCCTAAACTCCAAATCCC 57.958 45.455 0.00 0.00 0.00 3.85
2604 6683 3.660669 TGAACCCTAAACTCCAAATCCCT 59.339 43.478 0.00 0.00 0.00 4.20
2605 6684 4.853276 TGAACCCTAAACTCCAAATCCCTA 59.147 41.667 0.00 0.00 0.00 3.53
2606 6685 5.313772 TGAACCCTAAACTCCAAATCCCTAA 59.686 40.000 0.00 0.00 0.00 2.69
2607 6686 5.871324 ACCCTAAACTCCAAATCCCTAAA 57.129 39.130 0.00 0.00 0.00 1.85
2608 6687 6.222227 ACCCTAAACTCCAAATCCCTAAAA 57.778 37.500 0.00 0.00 0.00 1.52
2609 6688 6.811574 ACCCTAAACTCCAAATCCCTAAAAT 58.188 36.000 0.00 0.00 0.00 1.82
2610 6689 7.253421 ACCCTAAACTCCAAATCCCTAAAATT 58.747 34.615 0.00 0.00 0.00 1.82
2611 6690 8.403474 ACCCTAAACTCCAAATCCCTAAAATTA 58.597 33.333 0.00 0.00 0.00 1.40
2612 6691 8.914011 CCCTAAACTCCAAATCCCTAAAATTAG 58.086 37.037 0.00 0.00 0.00 1.73
2613 6692 8.414003 CCTAAACTCCAAATCCCTAAAATTAGC 58.586 37.037 0.00 0.00 0.00 3.09
2614 6693 7.790782 AAACTCCAAATCCCTAAAATTAGCA 57.209 32.000 0.00 0.00 0.00 3.49
2615 6694 6.775594 ACTCCAAATCCCTAAAATTAGCAC 57.224 37.500 0.00 0.00 0.00 4.40
2616 6695 5.656859 ACTCCAAATCCCTAAAATTAGCACC 59.343 40.000 0.00 0.00 0.00 5.01
2617 6696 4.959839 TCCAAATCCCTAAAATTAGCACCC 59.040 41.667 0.00 0.00 0.00 4.61
2618 6697 4.100963 CCAAATCCCTAAAATTAGCACCCC 59.899 45.833 0.00 0.00 0.00 4.95
2619 6698 2.721425 TCCCTAAAATTAGCACCCCG 57.279 50.000 0.00 0.00 0.00 5.73
2620 6699 1.917568 TCCCTAAAATTAGCACCCCGT 59.082 47.619 0.00 0.00 0.00 5.28
2621 6700 2.092807 TCCCTAAAATTAGCACCCCGTC 60.093 50.000 0.00 0.00 0.00 4.79
2622 6701 2.092592 CCCTAAAATTAGCACCCCGTCT 60.093 50.000 0.00 0.00 0.00 4.18
2623 6702 3.617284 CCTAAAATTAGCACCCCGTCTT 58.383 45.455 0.00 0.00 0.00 3.01
2624 6703 4.384427 CCCTAAAATTAGCACCCCGTCTTA 60.384 45.833 0.00 0.00 0.00 2.10
2625 6704 5.374071 CCTAAAATTAGCACCCCGTCTTAT 58.626 41.667 0.00 0.00 0.00 1.73
2626 6705 5.469084 CCTAAAATTAGCACCCCGTCTTATC 59.531 44.000 0.00 0.00 0.00 1.75
2627 6706 4.772886 AAATTAGCACCCCGTCTTATCT 57.227 40.909 0.00 0.00 0.00 1.98
2628 6707 5.881923 AAATTAGCACCCCGTCTTATCTA 57.118 39.130 0.00 0.00 0.00 1.98
2629 6708 5.881923 AATTAGCACCCCGTCTTATCTAA 57.118 39.130 0.00 0.00 0.00 2.10
2630 6709 6.435292 AATTAGCACCCCGTCTTATCTAAT 57.565 37.500 0.00 0.00 0.00 1.73
2631 6710 5.464030 TTAGCACCCCGTCTTATCTAATC 57.536 43.478 0.00 0.00 0.00 1.75
2632 6711 2.633481 AGCACCCCGTCTTATCTAATCC 59.367 50.000 0.00 0.00 0.00 3.01
2633 6712 2.289506 GCACCCCGTCTTATCTAATCCC 60.290 54.545 0.00 0.00 0.00 3.85
2634 6713 2.029290 CACCCCGTCTTATCTAATCCCG 60.029 54.545 0.00 0.00 0.00 5.14
2635 6714 1.549170 CCCCGTCTTATCTAATCCCGG 59.451 57.143 0.00 0.00 0.00 5.73
2636 6715 2.245582 CCCGTCTTATCTAATCCCGGT 58.754 52.381 0.00 0.00 32.32 5.28
2637 6716 2.631545 CCCGTCTTATCTAATCCCGGTT 59.368 50.000 0.00 0.00 32.32 4.44
2638 6717 3.070590 CCCGTCTTATCTAATCCCGGTTT 59.929 47.826 0.00 0.00 32.32 3.27
2639 6718 4.281688 CCCGTCTTATCTAATCCCGGTTTA 59.718 45.833 0.00 0.00 32.32 2.01
2640 6719 5.046807 CCCGTCTTATCTAATCCCGGTTTAT 60.047 44.000 0.00 0.00 32.32 1.40
2641 6720 6.098017 CCGTCTTATCTAATCCCGGTTTATC 58.902 44.000 0.00 0.00 0.00 1.75
2642 6721 6.098017 CGTCTTATCTAATCCCGGTTTATCC 58.902 44.000 0.00 0.00 0.00 2.59
2643 6722 6.404708 GTCTTATCTAATCCCGGTTTATCCC 58.595 44.000 0.00 0.00 0.00 3.85
2644 6723 6.013984 GTCTTATCTAATCCCGGTTTATCCCA 60.014 42.308 0.00 0.00 0.00 4.37
2645 6724 6.559539 TCTTATCTAATCCCGGTTTATCCCAA 59.440 38.462 0.00 0.00 0.00 4.12
2646 6725 4.426736 TCTAATCCCGGTTTATCCCAAC 57.573 45.455 0.00 0.00 0.00 3.77
2647 6726 2.447408 AATCCCGGTTTATCCCAACC 57.553 50.000 0.00 0.00 42.68 3.77
2648 6727 0.554305 ATCCCGGTTTATCCCAACCC 59.446 55.000 0.00 0.00 43.12 4.11
2649 6728 0.550638 TCCCGGTTTATCCCAACCCT 60.551 55.000 0.00 0.00 43.12 4.34
2650 6729 0.333652 CCCGGTTTATCCCAACCCTT 59.666 55.000 0.00 0.00 43.12 3.95
2651 6730 1.272816 CCCGGTTTATCCCAACCCTTT 60.273 52.381 0.00 0.00 43.12 3.11
2652 6731 2.097036 CCGGTTTATCCCAACCCTTTC 58.903 52.381 0.00 0.00 43.12 2.62
2653 6732 2.291346 CCGGTTTATCCCAACCCTTTCT 60.291 50.000 0.00 0.00 43.12 2.52
2654 6733 2.752903 CGGTTTATCCCAACCCTTTCTG 59.247 50.000 0.00 0.00 43.12 3.02
2655 6734 3.096852 GGTTTATCCCAACCCTTTCTGG 58.903 50.000 0.00 0.00 40.53 3.86
2656 6735 2.496070 GTTTATCCCAACCCTTTCTGGC 59.504 50.000 0.00 0.00 0.00 4.85
2657 6736 1.681229 TATCCCAACCCTTTCTGGCT 58.319 50.000 0.00 0.00 0.00 4.75
2658 6737 0.040204 ATCCCAACCCTTTCTGGCTG 59.960 55.000 0.00 0.00 0.00 4.85
2659 6738 1.065410 TCCCAACCCTTTCTGGCTGA 61.065 55.000 0.00 0.00 0.00 4.26
2660 6739 0.610232 CCCAACCCTTTCTGGCTGAG 60.610 60.000 0.00 0.00 0.00 3.35
2661 6740 0.610232 CCAACCCTTTCTGGCTGAGG 60.610 60.000 0.00 0.00 0.00 3.86
2662 6741 0.401738 CAACCCTTTCTGGCTGAGGA 59.598 55.000 5.36 0.00 32.11 3.71
2663 6742 0.695347 AACCCTTTCTGGCTGAGGAG 59.305 55.000 5.36 3.33 32.11 3.69
2664 6743 1.204113 ACCCTTTCTGGCTGAGGAGG 61.204 60.000 14.79 14.79 32.11 4.30
2665 6744 1.077858 CCTTTCTGGCTGAGGAGGC 60.078 63.158 11.15 0.00 45.19 4.70
2671 6750 2.032681 GGCTGAGGAGGCGTTTGT 59.967 61.111 0.00 0.00 34.60 2.83
2672 6751 2.035442 GGCTGAGGAGGCGTTTGTC 61.035 63.158 0.00 0.00 34.60 3.18
2673 6752 2.035442 GCTGAGGAGGCGTTTGTCC 61.035 63.158 0.00 0.00 0.00 4.02
2674 6753 1.376037 CTGAGGAGGCGTTTGTCCC 60.376 63.158 0.00 0.00 32.70 4.46
2675 6754 2.046217 GAGGAGGCGTTTGTCCCC 60.046 66.667 0.00 0.00 32.70 4.81
2676 6755 3.952628 GAGGAGGCGTTTGTCCCCG 62.953 68.421 0.00 0.00 32.70 5.73
2677 6756 4.324991 GGAGGCGTTTGTCCCCGT 62.325 66.667 0.00 0.00 0.00 5.28
2678 6757 2.741211 GAGGCGTTTGTCCCCGTC 60.741 66.667 0.00 0.00 0.00 4.79
2679 6758 3.524648 GAGGCGTTTGTCCCCGTCA 62.525 63.158 0.00 0.00 0.00 4.35
2680 6759 3.047877 GGCGTTTGTCCCCGTCAG 61.048 66.667 0.00 0.00 0.00 3.51
2681 6760 3.047877 GCGTTTGTCCCCGTCAGG 61.048 66.667 0.00 0.00 37.24 3.86
2682 6761 2.738480 CGTTTGTCCCCGTCAGGA 59.262 61.111 0.00 0.00 41.02 3.86
2683 6762 1.295423 CGTTTGTCCCCGTCAGGAT 59.705 57.895 0.00 0.00 41.02 3.24
2684 6763 0.321298 CGTTTGTCCCCGTCAGGATT 60.321 55.000 0.00 0.00 41.02 3.01
2685 6764 1.165270 GTTTGTCCCCGTCAGGATTG 58.835 55.000 0.00 0.00 41.02 2.67
2686 6765 0.608035 TTTGTCCCCGTCAGGATTGC 60.608 55.000 0.00 0.00 41.02 3.56
2687 6766 1.773856 TTGTCCCCGTCAGGATTGCA 61.774 55.000 0.00 0.00 41.02 4.08
2688 6767 1.745489 GTCCCCGTCAGGATTGCAC 60.745 63.158 0.00 0.00 41.02 4.57
2689 6768 2.220586 TCCCCGTCAGGATTGCACA 61.221 57.895 0.00 0.00 41.02 4.57
2690 6769 1.077501 CCCCGTCAGGATTGCACAT 60.078 57.895 0.00 0.00 41.02 3.21
2691 6770 1.378882 CCCCGTCAGGATTGCACATG 61.379 60.000 0.00 0.00 41.02 3.21
2692 6771 0.677731 CCCGTCAGGATTGCACATGT 60.678 55.000 0.00 0.00 41.02 3.21
2693 6772 1.406751 CCCGTCAGGATTGCACATGTA 60.407 52.381 0.00 0.00 41.02 2.29
2694 6773 2.355197 CCGTCAGGATTGCACATGTAA 58.645 47.619 0.00 0.00 41.02 2.41
2695 6774 2.095853 CCGTCAGGATTGCACATGTAAC 59.904 50.000 0.00 0.00 41.02 2.50
2696 6775 2.741517 CGTCAGGATTGCACATGTAACA 59.258 45.455 0.00 0.00 0.00 2.41
2697 6776 3.181517 CGTCAGGATTGCACATGTAACAG 60.182 47.826 0.00 0.00 0.00 3.16
2698 6777 4.002982 GTCAGGATTGCACATGTAACAGA 58.997 43.478 0.00 0.00 0.00 3.41
2699 6778 4.093998 GTCAGGATTGCACATGTAACAGAG 59.906 45.833 0.00 0.00 0.00 3.35
2700 6779 4.020307 TCAGGATTGCACATGTAACAGAGA 60.020 41.667 0.00 0.00 0.00 3.10
2701 6780 4.880120 CAGGATTGCACATGTAACAGAGAT 59.120 41.667 0.00 0.00 0.00 2.75
2702 6781 5.356190 CAGGATTGCACATGTAACAGAGATT 59.644 40.000 0.00 0.00 0.00 2.40
2703 6782 6.539826 CAGGATTGCACATGTAACAGAGATTA 59.460 38.462 0.00 0.00 0.00 1.75
2704 6783 6.765036 AGGATTGCACATGTAACAGAGATTAG 59.235 38.462 0.00 0.00 0.00 1.73
2705 6784 6.763135 GGATTGCACATGTAACAGAGATTAGA 59.237 38.462 0.00 0.00 0.00 2.10
2706 6785 7.042187 GGATTGCACATGTAACAGAGATTAGAG 60.042 40.741 0.00 0.00 0.00 2.43
2707 6786 6.530019 TGCACATGTAACAGAGATTAGAGA 57.470 37.500 0.00 0.00 0.00 3.10
2708 6787 6.935167 TGCACATGTAACAGAGATTAGAGAA 58.065 36.000 0.00 0.00 0.00 2.87
2709 6788 7.386059 TGCACATGTAACAGAGATTAGAGAAA 58.614 34.615 0.00 0.00 0.00 2.52
2710 6789 7.877612 TGCACATGTAACAGAGATTAGAGAAAA 59.122 33.333 0.00 0.00 0.00 2.29
2711 6790 8.171840 GCACATGTAACAGAGATTAGAGAAAAC 58.828 37.037 0.00 0.00 0.00 2.43
2712 6791 8.660373 CACATGTAACAGAGATTAGAGAAAACC 58.340 37.037 0.00 0.00 0.00 3.27
2713 6792 7.545965 ACATGTAACAGAGATTAGAGAAAACCG 59.454 37.037 0.00 0.00 0.00 4.44
2714 6793 7.223260 TGTAACAGAGATTAGAGAAAACCGA 57.777 36.000 0.00 0.00 0.00 4.69
2715 6794 7.663827 TGTAACAGAGATTAGAGAAAACCGAA 58.336 34.615 0.00 0.00 0.00 4.30
2716 6795 8.311836 TGTAACAGAGATTAGAGAAAACCGAAT 58.688 33.333 0.00 0.00 0.00 3.34
2717 6796 9.798994 GTAACAGAGATTAGAGAAAACCGAATA 57.201 33.333 0.00 0.00 0.00 1.75
2718 6797 8.934507 AACAGAGATTAGAGAAAACCGAATAG 57.065 34.615 0.00 0.00 0.00 1.73
2719 6798 8.068892 ACAGAGATTAGAGAAAACCGAATAGT 57.931 34.615 0.00 0.00 0.00 2.12
2720 6799 8.532819 ACAGAGATTAGAGAAAACCGAATAGTT 58.467 33.333 0.00 0.00 0.00 2.24
2721 6800 9.372369 CAGAGATTAGAGAAAACCGAATAGTTT 57.628 33.333 0.00 0.00 41.67 2.66
2729 6808 3.915437 AACCGAATAGTTTTGCAGTGG 57.085 42.857 0.00 0.00 0.00 4.00
2730 6809 2.159382 ACCGAATAGTTTTGCAGTGGG 58.841 47.619 0.00 0.00 0.00 4.61
2731 6810 2.224670 ACCGAATAGTTTTGCAGTGGGA 60.225 45.455 0.00 0.00 0.00 4.37
2732 6811 3.016736 CCGAATAGTTTTGCAGTGGGAT 58.983 45.455 0.00 0.00 0.00 3.85
2733 6812 4.196193 CCGAATAGTTTTGCAGTGGGATA 58.804 43.478 0.00 0.00 0.00 2.59
2734 6813 4.273480 CCGAATAGTTTTGCAGTGGGATAG 59.727 45.833 0.00 0.00 0.00 2.08
2735 6814 5.116180 CGAATAGTTTTGCAGTGGGATAGA 58.884 41.667 0.00 0.00 0.00 1.98
2736 6815 5.760253 CGAATAGTTTTGCAGTGGGATAGAT 59.240 40.000 0.00 0.00 0.00 1.98
2737 6816 6.293081 CGAATAGTTTTGCAGTGGGATAGATG 60.293 42.308 0.00 0.00 0.00 2.90
2738 6817 3.624777 AGTTTTGCAGTGGGATAGATGG 58.375 45.455 0.00 0.00 0.00 3.51
2739 6818 3.266772 AGTTTTGCAGTGGGATAGATGGA 59.733 43.478 0.00 0.00 0.00 3.41
2740 6819 3.565764 TTTGCAGTGGGATAGATGGAG 57.434 47.619 0.00 0.00 0.00 3.86
2741 6820 2.477104 TGCAGTGGGATAGATGGAGA 57.523 50.000 0.00 0.00 0.00 3.71
2742 6821 2.042464 TGCAGTGGGATAGATGGAGAC 58.958 52.381 0.00 0.00 0.00 3.36
2743 6822 2.324541 GCAGTGGGATAGATGGAGACT 58.675 52.381 0.00 0.00 0.00 3.24
2744 6823 2.703007 GCAGTGGGATAGATGGAGACTT 59.297 50.000 0.00 0.00 0.00 3.01
2745 6824 3.898123 GCAGTGGGATAGATGGAGACTTA 59.102 47.826 0.00 0.00 0.00 2.24
2746 6825 4.262249 GCAGTGGGATAGATGGAGACTTAC 60.262 50.000 0.00 0.00 0.00 2.34
2747 6826 4.282195 CAGTGGGATAGATGGAGACTTACC 59.718 50.000 0.00 0.00 0.00 2.85
2748 6827 3.256136 GTGGGATAGATGGAGACTTACCG 59.744 52.174 0.00 0.00 0.00 4.02
2749 6828 3.139584 TGGGATAGATGGAGACTTACCGA 59.860 47.826 0.00 0.00 0.00 4.69
2750 6829 4.150359 GGGATAGATGGAGACTTACCGAA 58.850 47.826 0.00 0.00 0.00 4.30
2751 6830 4.218852 GGGATAGATGGAGACTTACCGAAG 59.781 50.000 0.00 0.00 38.76 3.79
2753 6832 5.278561 GGATAGATGGAGACTTACCGAAGTG 60.279 48.000 0.00 0.00 46.23 3.16
2754 6833 2.761208 AGATGGAGACTTACCGAAGTGG 59.239 50.000 0.00 0.00 46.23 4.00
2755 6834 0.606604 TGGAGACTTACCGAAGTGGC 59.393 55.000 0.00 0.00 46.23 5.01
2756 6835 0.896226 GGAGACTTACCGAAGTGGCT 59.104 55.000 0.00 0.00 46.23 4.75
2757 6836 1.404315 GGAGACTTACCGAAGTGGCTG 60.404 57.143 0.00 0.00 46.23 4.85
2758 6837 1.272769 GAGACTTACCGAAGTGGCTGT 59.727 52.381 0.00 0.00 46.23 4.40
2759 6838 1.692519 AGACTTACCGAAGTGGCTGTT 59.307 47.619 0.00 0.00 46.23 3.16
2760 6839 2.067013 GACTTACCGAAGTGGCTGTTC 58.933 52.381 0.00 0.00 46.23 3.18
2761 6840 1.414919 ACTTACCGAAGTGGCTGTTCA 59.585 47.619 0.00 0.00 44.50 3.18
2762 6841 2.158871 ACTTACCGAAGTGGCTGTTCAA 60.159 45.455 0.00 0.00 44.50 2.69
2763 6842 2.851263 TACCGAAGTGGCTGTTCAAT 57.149 45.000 0.00 0.00 43.94 2.57
2764 6843 1.523758 ACCGAAGTGGCTGTTCAATC 58.476 50.000 0.00 0.00 43.94 2.67
2765 6844 1.072331 ACCGAAGTGGCTGTTCAATCT 59.928 47.619 0.00 0.00 43.94 2.40
2766 6845 2.154462 CCGAAGTGGCTGTTCAATCTT 58.846 47.619 0.00 0.00 0.00 2.40
2767 6846 2.554032 CCGAAGTGGCTGTTCAATCTTT 59.446 45.455 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.095911 CTGTACCGTAGCGAGCGA 58.904 61.111 0.00 0.00 0.00 4.93
22 23 3.474600 TGTATCTCTACTCCGCTGTACC 58.525 50.000 0.00 0.00 0.00 3.34
23 24 5.238868 TGATTGTATCTCTACTCCGCTGTAC 59.761 44.000 0.00 0.00 0.00 2.90
56 58 2.511600 GGGTCCGCGACAGGAATG 60.512 66.667 8.23 0.00 42.77 2.67
97 103 1.651987 GCCTGCATGTGTACGTACAT 58.348 50.000 29.58 14.65 41.77 2.29
99 105 0.390603 TGGCCTGCATGTGTACGTAC 60.391 55.000 18.90 18.90 0.00 3.67
135 171 2.359975 GCTGAACGGAACCCCTGG 60.360 66.667 0.00 0.00 0.00 4.45
141 177 2.290641 ACTGAACATTGCTGAACGGAAC 59.709 45.455 0.00 0.00 0.00 3.62
145 181 1.664016 GGCACTGAACATTGCTGAACG 60.664 52.381 14.65 0.00 37.20 3.95
164 200 4.015872 TGGTGCTCTAGTTTACCTTTGG 57.984 45.455 11.39 0.00 34.32 3.28
165 201 5.003804 ACATGGTGCTCTAGTTTACCTTTG 58.996 41.667 0.00 10.95 34.32 2.77
166 202 5.242795 ACATGGTGCTCTAGTTTACCTTT 57.757 39.130 0.00 0.67 34.32 3.11
183 246 1.596603 TCTGTGCACTGTCAACATGG 58.403 50.000 19.41 0.00 0.00 3.66
220 283 3.558505 CAAGGAATGAACTTGCACTTCG 58.441 45.455 0.00 0.00 38.89 3.79
221 284 3.858503 GCCAAGGAATGAACTTGCACTTC 60.859 47.826 0.00 0.00 42.98 3.01
222 285 2.036346 GCCAAGGAATGAACTTGCACTT 59.964 45.455 0.00 0.00 42.98 3.16
232 336 5.350504 TTTTGTTTCTTGCCAAGGAATGA 57.649 34.783 0.59 0.00 0.00 2.57
237 341 4.934602 TGAACTTTTTGTTTCTTGCCAAGG 59.065 37.500 4.30 0.00 39.30 3.61
238 342 5.639082 ACTGAACTTTTTGTTTCTTGCCAAG 59.361 36.000 0.00 0.00 39.30 3.61
239 343 5.546526 ACTGAACTTTTTGTTTCTTGCCAA 58.453 33.333 0.00 0.00 39.30 4.52
251 355 4.157840 GGACCACACTGAACTGAACTTTTT 59.842 41.667 0.00 0.00 0.00 1.94
254 358 2.741878 CGGACCACACTGAACTGAACTT 60.742 50.000 0.00 0.00 0.00 2.66
255 359 1.202533 CGGACCACACTGAACTGAACT 60.203 52.381 0.00 0.00 0.00 3.01
256 360 1.217882 CGGACCACACTGAACTGAAC 58.782 55.000 0.00 0.00 0.00 3.18
257 361 0.828022 ACGGACCACACTGAACTGAA 59.172 50.000 0.00 0.00 0.00 3.02
258 362 0.828022 AACGGACCACACTGAACTGA 59.172 50.000 0.00 0.00 0.00 3.41
259 363 1.330521 CAAACGGACCACACTGAACTG 59.669 52.381 0.00 0.00 0.00 3.16
260 364 1.663695 CAAACGGACCACACTGAACT 58.336 50.000 0.00 0.00 0.00 3.01
261 365 0.028902 GCAAACGGACCACACTGAAC 59.971 55.000 0.00 0.00 0.00 3.18
263 367 1.525077 GGCAAACGGACCACACTGA 60.525 57.895 0.00 0.00 0.00 3.41
264 368 3.030652 GGCAAACGGACCACACTG 58.969 61.111 0.00 0.00 0.00 3.66
271 375 2.519780 TTGGGTGGGCAAACGGAC 60.520 61.111 0.00 0.00 0.00 4.79
272 376 2.203422 CTTGGGTGGGCAAACGGA 60.203 61.111 0.00 0.00 0.00 4.69
273 377 2.203422 TCTTGGGTGGGCAAACGG 60.203 61.111 0.00 0.00 0.00 4.44
274 378 2.561037 GGTCTTGGGTGGGCAAACG 61.561 63.158 0.00 0.00 0.00 3.60
275 379 2.561037 CGGTCTTGGGTGGGCAAAC 61.561 63.158 0.00 0.00 0.00 2.93
279 1477 4.410400 CCTCGGTCTTGGGTGGGC 62.410 72.222 0.00 0.00 0.00 5.36
282 1480 3.691342 TCGCCTCGGTCTTGGGTG 61.691 66.667 0.00 0.00 0.00 4.61
283 1481 3.692406 GTCGCCTCGGTCTTGGGT 61.692 66.667 0.00 0.00 0.00 4.51
295 1493 3.785499 GAAACCCTTCGCGTCGCC 61.785 66.667 12.44 0.00 0.00 5.54
316 1515 2.103094 TGCTACATCTACATGCACCTCC 59.897 50.000 0.00 0.00 32.57 4.30
330 1529 3.012518 GCATGAGAAGTTGGTGCTACAT 58.987 45.455 0.00 0.00 33.25 2.29
331 1530 2.224499 TGCATGAGAAGTTGGTGCTACA 60.224 45.455 0.00 0.00 36.78 2.74
333 1532 2.857186 TGCATGAGAAGTTGGTGCTA 57.143 45.000 0.00 0.00 36.78 3.49
335 1534 1.734707 GCATGCATGAGAAGTTGGTGC 60.735 52.381 30.64 7.87 36.39 5.01
360 1562 1.613437 CTTTGTTTACTGTGGCCCAGG 59.387 52.381 20.97 5.47 46.06 4.45
362 1564 2.028130 CACTTTGTTTACTGTGGCCCA 58.972 47.619 0.00 0.00 0.00 5.36
363 1565 2.293399 CTCACTTTGTTTACTGTGGCCC 59.707 50.000 0.00 0.00 0.00 5.80
364 1566 2.287608 GCTCACTTTGTTTACTGTGGCC 60.288 50.000 0.00 0.00 0.00 5.36
365 1567 2.287608 GGCTCACTTTGTTTACTGTGGC 60.288 50.000 0.00 0.00 0.00 5.01
366 1568 2.293399 GGGCTCACTTTGTTTACTGTGG 59.707 50.000 0.00 0.00 0.00 4.17
367 1569 2.032030 CGGGCTCACTTTGTTTACTGTG 60.032 50.000 0.00 0.00 0.00 3.66
450 1652 2.500369 GAACAGTGTGCATGCGCG 60.500 61.111 25.08 14.12 42.97 6.86
451 1653 1.000233 CTTGAACAGTGTGCATGCGC 61.000 55.000 24.25 24.25 39.24 6.09
452 1654 0.308684 ACTTGAACAGTGTGCATGCG 59.691 50.000 15.45 5.77 32.83 4.73
453 1655 2.549754 AGTACTTGAACAGTGTGCATGC 59.450 45.455 11.82 11.82 35.97 4.06
454 1656 4.818534 AAGTACTTGAACAGTGTGCATG 57.181 40.909 14.22 14.22 35.97 4.06
455 1657 5.835113 AAAAGTACTTGAACAGTGTGCAT 57.165 34.783 9.34 0.00 35.97 3.96
456 1658 6.935741 ATAAAAGTACTTGAACAGTGTGCA 57.064 33.333 9.34 0.00 35.97 4.57
512 1714 5.817296 CAGTACAGAAAATATAGCAGTGCCA 59.183 40.000 12.58 0.00 0.00 4.92
633 1839 1.604604 TGCTAGTTTGGCCACTTGTC 58.395 50.000 3.88 0.00 0.00 3.18
642 1851 5.163854 CGAAATCCTGTACTTGCTAGTTTGG 60.164 44.000 6.03 6.82 35.78 3.28
649 1858 6.407202 ACTATTTCGAAATCCTGTACTTGCT 58.593 36.000 25.89 1.93 0.00 3.91
687 1896 3.824414 AAATTTGACGACGGAATCACC 57.176 42.857 0.00 0.00 0.00 4.02
689 1898 5.121142 GTCCTAAAATTTGACGACGGAATCA 59.879 40.000 0.00 0.00 0.00 2.57
698 1907 6.086222 CCACTTGATGTCCTAAAATTTGACG 58.914 40.000 0.00 0.00 0.00 4.35
711 1920 4.142381 GGAGTAATTTGCCCACTTGATGTC 60.142 45.833 0.00 0.00 0.00 3.06
746 1955 0.035056 GCACCTGGCTTCCACTATGT 60.035 55.000 0.00 0.00 40.25 2.29
770 1979 2.516923 CCACGCTAAGTCAGACTTACG 58.483 52.381 26.65 26.65 39.51 3.18
931 2140 2.125912 CCGCGGTGGTTGAGAGAG 60.126 66.667 19.50 0.00 0.00 3.20
1113 2351 3.123620 GGCCTGTCTTCTGCGCTG 61.124 66.667 9.73 8.88 0.00 5.18
1114 2352 4.749310 CGGCCTGTCTTCTGCGCT 62.749 66.667 9.73 0.00 0.00 5.92
1179 2423 2.125552 TTGATCGCACCGCCAGAG 60.126 61.111 0.00 0.00 0.00 3.35
1180 2424 2.434185 GTTGATCGCACCGCCAGA 60.434 61.111 0.00 0.00 0.00 3.86
1315 2559 0.904394 GGGGACGGGTGGTACTTGTA 60.904 60.000 0.00 0.00 0.00 2.41
1401 2645 1.998315 TCTTCTACGTCGTTCTCCTCG 59.002 52.381 1.78 0.00 0.00 4.63
1404 2648 2.352342 CTCCTCTTCTACGTCGTTCTCC 59.648 54.545 1.78 0.00 0.00 3.71
1407 2651 2.095692 GTCCTCCTCTTCTACGTCGTTC 59.904 54.545 1.78 0.00 0.00 3.95
1409 2653 1.736612 GTCCTCCTCTTCTACGTCGT 58.263 55.000 2.21 2.21 0.00 4.34
1427 2671 2.354305 GCTCGTCGTTGTGTCCGT 60.354 61.111 0.00 0.00 0.00 4.69
1428 2672 3.103911 GGCTCGTCGTTGTGTCCG 61.104 66.667 0.00 0.00 0.00 4.79
1430 2674 1.733399 GGAGGCTCGTCGTTGTGTC 60.733 63.158 8.69 0.00 0.00 3.67
1432 2676 2.805353 CGGAGGCTCGTCGTTGTG 60.805 66.667 8.69 0.00 0.00 3.33
1509 2756 2.182030 CCGTCCTCGTCAGCTTCC 59.818 66.667 0.00 0.00 35.01 3.46
1532 2779 4.720902 CCATGCCGCACTGGGTCA 62.721 66.667 11.82 0.00 38.63 4.02
1534 2781 4.722700 GACCATGCCGCACTGGGT 62.723 66.667 19.61 16.19 38.63 4.51
1554 2801 2.640989 CCGTCCTCGTCGTTGACA 59.359 61.111 14.17 0.00 35.01 3.58
1556 2803 4.047059 GGCCGTCCTCGTCGTTGA 62.047 66.667 0.00 0.00 35.01 3.18
1578 2825 2.154798 CTTCCTCTTCGTGCCGGTCA 62.155 60.000 1.90 0.00 0.00 4.02
1581 2828 0.737715 CTTCTTCCTCTTCGTGCCGG 60.738 60.000 0.00 0.00 0.00 6.13
1758 3008 4.383989 GCAGAGGATCCAGTTCAGAAGATT 60.384 45.833 15.82 0.00 33.66 2.40
1803 3053 3.087031 AGGCTCCAATGTCTGAACAATG 58.913 45.455 0.00 0.00 39.30 2.82
1806 3056 1.421268 ACAGGCTCCAATGTCTGAACA 59.579 47.619 3.03 0.00 40.38 3.18
1807 3057 2.191128 ACAGGCTCCAATGTCTGAAC 57.809 50.000 3.03 0.00 0.00 3.18
1809 3059 5.692115 TTATTACAGGCTCCAATGTCTGA 57.308 39.130 3.03 0.00 0.00 3.27
1810 3060 6.293081 CGAATTATTACAGGCTCCAATGTCTG 60.293 42.308 0.00 0.00 0.00 3.51
1811 3061 5.760253 CGAATTATTACAGGCTCCAATGTCT 59.240 40.000 0.00 0.00 0.00 3.41
1812 3062 5.527582 ACGAATTATTACAGGCTCCAATGTC 59.472 40.000 0.00 0.00 0.00 3.06
1813 3063 5.437060 ACGAATTATTACAGGCTCCAATGT 58.563 37.500 0.00 0.00 0.00 2.71
1814 3064 6.377327 AACGAATTATTACAGGCTCCAATG 57.623 37.500 0.00 0.00 0.00 2.82
1815 3065 5.236478 CGAACGAATTATTACAGGCTCCAAT 59.764 40.000 0.00 0.00 0.00 3.16
1816 3066 4.569162 CGAACGAATTATTACAGGCTCCAA 59.431 41.667 0.00 0.00 0.00 3.53
1817 3067 4.116961 CGAACGAATTATTACAGGCTCCA 58.883 43.478 0.00 0.00 0.00 3.86
1819 3069 5.961395 TTCGAACGAATTATTACAGGCTC 57.039 39.130 5.53 0.00 0.00 4.70
1820 3070 6.920569 ATTTCGAACGAATTATTACAGGCT 57.079 33.333 10.33 0.00 33.79 4.58
1821 3071 8.333186 ACTTATTTCGAACGAATTATTACAGGC 58.667 33.333 10.33 0.00 33.79 4.85
1822 3072 9.632969 CACTTATTTCGAACGAATTATTACAGG 57.367 33.333 10.33 0.00 33.79 4.00
1857 5897 2.917933 CTCACAAGTCCCAACTGTTCA 58.082 47.619 0.00 0.00 35.36 3.18
1867 5907 1.634702 GATCAGTCGCTCACAAGTCC 58.365 55.000 0.00 0.00 0.00 3.85
1890 5930 2.748058 AATCACACCACACGGCCTCC 62.748 60.000 0.00 0.00 34.57 4.30
1892 5932 1.600636 CAATCACACCACACGGCCT 60.601 57.895 0.00 0.00 34.57 5.19
1893 5933 1.452145 AACAATCACACCACACGGCC 61.452 55.000 0.00 0.00 34.57 6.13
1895 5935 1.593196 AGAACAATCACACCACACGG 58.407 50.000 0.00 0.00 38.77 4.94
1939 5999 6.484977 TGATTGCTGTTAGTTTGTCACATGTA 59.515 34.615 0.00 0.00 0.00 2.29
1995 6056 2.021457 CCTACCCGGCCATAAACAAAG 58.979 52.381 2.24 0.00 0.00 2.77
2008 6069 1.741770 GTGCAGTTGCTCCTACCCG 60.742 63.158 5.62 0.00 42.66 5.28
2099 6160 3.666111 CGCAACTGACACTGACATGAATG 60.666 47.826 0.00 0.00 0.00 2.67
2202 6269 1.463674 GCGTCAAGACCCCATCAAAT 58.536 50.000 0.00 0.00 0.00 2.32
2240 6307 6.852664 ACACAAGACGTCTTTCTTCAAAAAT 58.147 32.000 27.79 0.00 33.31 1.82
2245 6315 6.759356 TCAAATACACAAGACGTCTTTCTTCA 59.241 34.615 27.79 12.59 33.31 3.02
2246 6316 7.064064 GTCAAATACACAAGACGTCTTTCTTC 58.936 38.462 27.79 7.04 33.31 2.87
2247 6317 6.018180 GGTCAAATACACAAGACGTCTTTCTT 60.018 38.462 27.79 16.19 36.18 2.52
2391 6470 7.615757 ACTTTTCCCCCTTTCAAATAGTAGATG 59.384 37.037 0.00 0.00 0.00 2.90
2397 6476 5.306937 ACCAACTTTTCCCCCTTTCAAATAG 59.693 40.000 0.00 0.00 0.00 1.73
2399 6478 4.044308 ACCAACTTTTCCCCCTTTCAAAT 58.956 39.130 0.00 0.00 0.00 2.32
2400 6479 3.455849 ACCAACTTTTCCCCCTTTCAAA 58.544 40.909 0.00 0.00 0.00 2.69
2401 6480 3.123392 ACCAACTTTTCCCCCTTTCAA 57.877 42.857 0.00 0.00 0.00 2.69
2402 6481 2.858787 ACCAACTTTTCCCCCTTTCA 57.141 45.000 0.00 0.00 0.00 2.69
2403 6482 4.020573 CCAATACCAACTTTTCCCCCTTTC 60.021 45.833 0.00 0.00 0.00 2.62
2404 6483 3.907474 CCAATACCAACTTTTCCCCCTTT 59.093 43.478 0.00 0.00 0.00 3.11
2407 6486 1.553248 GCCAATACCAACTTTTCCCCC 59.447 52.381 0.00 0.00 0.00 5.40
2412 6491 3.906846 TCCCATTGCCAATACCAACTTTT 59.093 39.130 0.00 0.00 0.00 2.27
2435 6514 1.462283 CACGCCAGAAATCTGTGTCAG 59.538 52.381 9.43 0.00 42.27 3.51
2436 6515 1.069978 TCACGCCAGAAATCTGTGTCA 59.930 47.619 9.43 0.00 42.27 3.58
2437 6516 1.795768 TCACGCCAGAAATCTGTGTC 58.204 50.000 9.43 0.00 42.27 3.67
2438 6517 2.479566 ATCACGCCAGAAATCTGTGT 57.520 45.000 9.43 4.98 42.27 3.72
2439 6518 3.005554 AGAATCACGCCAGAAATCTGTG 58.994 45.455 9.43 4.40 42.27 3.66
2440 6519 3.005554 CAGAATCACGCCAGAAATCTGT 58.994 45.455 9.43 0.00 42.27 3.41
2441 6520 2.353889 CCAGAATCACGCCAGAAATCTG 59.646 50.000 3.37 3.37 43.40 2.90
2442 6521 2.026822 ACCAGAATCACGCCAGAAATCT 60.027 45.455 0.00 0.00 0.00 2.40
2443 6522 2.096496 CACCAGAATCACGCCAGAAATC 59.904 50.000 0.00 0.00 0.00 2.17
2444 6523 2.086869 CACCAGAATCACGCCAGAAAT 58.913 47.619 0.00 0.00 0.00 2.17
2445 6524 1.202758 ACACCAGAATCACGCCAGAAA 60.203 47.619 0.00 0.00 0.00 2.52
2446 6525 0.396435 ACACCAGAATCACGCCAGAA 59.604 50.000 0.00 0.00 0.00 3.02
2447 6526 0.320683 CACACCAGAATCACGCCAGA 60.321 55.000 0.00 0.00 0.00 3.86
2448 6527 1.300971 CCACACCAGAATCACGCCAG 61.301 60.000 0.00 0.00 0.00 4.85
2449 6528 1.302431 CCACACCAGAATCACGCCA 60.302 57.895 0.00 0.00 0.00 5.69
2450 6529 0.036765 TACCACACCAGAATCACGCC 60.037 55.000 0.00 0.00 0.00 5.68
2451 6530 1.337823 ACTACCACACCAGAATCACGC 60.338 52.381 0.00 0.00 0.00 5.34
2452 6531 2.743636 ACTACCACACCAGAATCACG 57.256 50.000 0.00 0.00 0.00 4.35
2453 6532 4.381718 GGAGTACTACCACACCAGAATCAC 60.382 50.000 0.00 0.00 0.00 3.06
2454 6533 3.767673 GGAGTACTACCACACCAGAATCA 59.232 47.826 0.00 0.00 0.00 2.57
2455 6534 4.024670 AGGAGTACTACCACACCAGAATC 58.975 47.826 0.00 0.00 32.13 2.52
2456 6535 4.024670 GAGGAGTACTACCACACCAGAAT 58.975 47.826 0.00 0.00 32.13 2.40
2457 6536 3.075582 AGAGGAGTACTACCACACCAGAA 59.924 47.826 0.00 0.00 32.13 3.02
2458 6537 2.648304 AGAGGAGTACTACCACACCAGA 59.352 50.000 0.00 0.00 32.13 3.86
2459 6538 2.755655 CAGAGGAGTACTACCACACCAG 59.244 54.545 0.00 0.00 32.13 4.00
2460 6539 2.556782 CCAGAGGAGTACTACCACACCA 60.557 54.545 0.00 0.00 32.13 4.17
2461 6540 2.100989 CCAGAGGAGTACTACCACACC 58.899 57.143 0.00 0.00 0.00 4.16
2462 6541 1.477295 GCCAGAGGAGTACTACCACAC 59.523 57.143 0.00 0.00 0.00 3.82
2463 6542 1.358103 AGCCAGAGGAGTACTACCACA 59.642 52.381 0.00 0.00 0.00 4.17
2464 6543 2.025898 GAGCCAGAGGAGTACTACCAC 58.974 57.143 0.00 1.36 0.00 4.16
2465 6544 1.923850 AGAGCCAGAGGAGTACTACCA 59.076 52.381 0.00 0.00 0.00 3.25
2466 6545 2.303175 CAGAGCCAGAGGAGTACTACC 58.697 57.143 0.00 2.33 0.00 3.18
2467 6546 2.303175 CCAGAGCCAGAGGAGTACTAC 58.697 57.143 0.00 0.00 0.00 2.73
2468 6547 1.215673 CCCAGAGCCAGAGGAGTACTA 59.784 57.143 0.00 0.00 0.00 1.82
2469 6548 0.032615 CCCAGAGCCAGAGGAGTACT 60.033 60.000 0.00 0.00 0.00 2.73
2470 6549 0.324830 ACCCAGAGCCAGAGGAGTAC 60.325 60.000 0.00 0.00 0.00 2.73
2471 6550 1.305886 TACCCAGAGCCAGAGGAGTA 58.694 55.000 0.00 0.00 0.00 2.59
2472 6551 0.639392 ATACCCAGAGCCAGAGGAGT 59.361 55.000 0.00 0.00 0.00 3.85
2473 6552 1.799933 AATACCCAGAGCCAGAGGAG 58.200 55.000 0.00 0.00 0.00 3.69
2474 6553 3.142977 AGATAATACCCAGAGCCAGAGGA 59.857 47.826 0.00 0.00 0.00 3.71
2475 6554 3.515562 AGATAATACCCAGAGCCAGAGG 58.484 50.000 0.00 0.00 0.00 3.69
2476 6555 4.802248 GCAAGATAATACCCAGAGCCAGAG 60.802 50.000 0.00 0.00 0.00 3.35
2477 6556 3.071602 GCAAGATAATACCCAGAGCCAGA 59.928 47.826 0.00 0.00 0.00 3.86
2478 6557 3.406764 GCAAGATAATACCCAGAGCCAG 58.593 50.000 0.00 0.00 0.00 4.85
2479 6558 2.106511 GGCAAGATAATACCCAGAGCCA 59.893 50.000 0.00 0.00 39.35 4.75
2480 6559 2.373502 AGGCAAGATAATACCCAGAGCC 59.626 50.000 0.00 0.00 39.82 4.70
2481 6560 3.406764 CAGGCAAGATAATACCCAGAGC 58.593 50.000 0.00 0.00 0.00 4.09
2482 6561 3.392616 ACCAGGCAAGATAATACCCAGAG 59.607 47.826 0.00 0.00 0.00 3.35
2483 6562 3.393687 ACCAGGCAAGATAATACCCAGA 58.606 45.455 0.00 0.00 0.00 3.86
2484 6563 3.864789 ACCAGGCAAGATAATACCCAG 57.135 47.619 0.00 0.00 0.00 4.45
2485 6564 4.601406 AAACCAGGCAAGATAATACCCA 57.399 40.909 0.00 0.00 0.00 4.51
2486 6565 8.161425 TCTTATAAACCAGGCAAGATAATACCC 58.839 37.037 0.00 0.00 0.00 3.69
2487 6566 9.220767 CTCTTATAAACCAGGCAAGATAATACC 57.779 37.037 0.00 0.00 0.00 2.73
2488 6567 9.998106 TCTCTTATAAACCAGGCAAGATAATAC 57.002 33.333 0.00 0.00 0.00 1.89
2490 6569 9.732130 GATCTCTTATAAACCAGGCAAGATAAT 57.268 33.333 0.00 0.00 0.00 1.28
2491 6570 8.713971 TGATCTCTTATAAACCAGGCAAGATAA 58.286 33.333 0.00 0.00 0.00 1.75
2492 6571 8.262601 TGATCTCTTATAAACCAGGCAAGATA 57.737 34.615 0.00 0.00 0.00 1.98
2493 6572 7.141758 TGATCTCTTATAAACCAGGCAAGAT 57.858 36.000 0.00 0.00 0.00 2.40
2494 6573 6.156949 ACTGATCTCTTATAAACCAGGCAAGA 59.843 38.462 0.00 0.00 0.00 3.02
2495 6574 6.352516 ACTGATCTCTTATAAACCAGGCAAG 58.647 40.000 0.00 0.00 0.00 4.01
2496 6575 6.313519 ACTGATCTCTTATAAACCAGGCAA 57.686 37.500 0.00 0.00 0.00 4.52
2497 6576 5.957771 ACTGATCTCTTATAAACCAGGCA 57.042 39.130 0.00 0.00 0.00 4.75
2498 6577 6.038714 CCAAACTGATCTCTTATAAACCAGGC 59.961 42.308 0.00 0.00 0.00 4.85
2499 6578 7.338710 TCCAAACTGATCTCTTATAAACCAGG 58.661 38.462 0.00 0.00 0.00 4.45
2500 6579 8.970859 ATCCAAACTGATCTCTTATAAACCAG 57.029 34.615 0.00 0.00 0.00 4.00
2509 6588 9.753674 TTTTACCAATATCCAAACTGATCTCTT 57.246 29.630 0.00 0.00 0.00 2.85
2510 6589 9.401058 CTTTTACCAATATCCAAACTGATCTCT 57.599 33.333 0.00 0.00 0.00 3.10
2511 6590 9.396022 TCTTTTACCAATATCCAAACTGATCTC 57.604 33.333 0.00 0.00 0.00 2.75
2512 6591 9.753674 TTCTTTTACCAATATCCAAACTGATCT 57.246 29.630 0.00 0.00 0.00 2.75
2564 6643 5.287992 GGGTTCATTTAAGACTTCGACTACG 59.712 44.000 0.00 0.00 41.26 3.51
2565 6644 6.396450 AGGGTTCATTTAAGACTTCGACTAC 58.604 40.000 0.00 0.00 0.00 2.73
2566 6645 6.600882 AGGGTTCATTTAAGACTTCGACTA 57.399 37.500 0.00 0.00 0.00 2.59
2567 6646 5.485209 AGGGTTCATTTAAGACTTCGACT 57.515 39.130 0.00 0.00 0.00 4.18
2568 6647 7.387122 AGTTTAGGGTTCATTTAAGACTTCGAC 59.613 37.037 0.00 0.00 0.00 4.20
2569 6648 7.447594 AGTTTAGGGTTCATTTAAGACTTCGA 58.552 34.615 0.00 0.00 0.00 3.71
2570 6649 7.148457 GGAGTTTAGGGTTCATTTAAGACTTCG 60.148 40.741 0.00 0.00 0.00 3.79
2571 6650 7.664318 TGGAGTTTAGGGTTCATTTAAGACTTC 59.336 37.037 0.00 0.00 0.00 3.01
2572 6651 7.523415 TGGAGTTTAGGGTTCATTTAAGACTT 58.477 34.615 0.00 0.00 0.00 3.01
2573 6652 7.086685 TGGAGTTTAGGGTTCATTTAAGACT 57.913 36.000 0.00 0.00 0.00 3.24
2574 6653 7.754851 TTGGAGTTTAGGGTTCATTTAAGAC 57.245 36.000 0.00 0.00 0.00 3.01
2575 6654 8.950007 ATTTGGAGTTTAGGGTTCATTTAAGA 57.050 30.769 0.00 0.00 0.00 2.10
2576 6655 8.251026 GGATTTGGAGTTTAGGGTTCATTTAAG 58.749 37.037 0.00 0.00 0.00 1.85
2577 6656 7.179516 GGGATTTGGAGTTTAGGGTTCATTTAA 59.820 37.037 0.00 0.00 0.00 1.52
2578 6657 6.666113 GGGATTTGGAGTTTAGGGTTCATTTA 59.334 38.462 0.00 0.00 0.00 1.40
2579 6658 5.483937 GGGATTTGGAGTTTAGGGTTCATTT 59.516 40.000 0.00 0.00 0.00 2.32
2580 6659 5.023452 GGGATTTGGAGTTTAGGGTTCATT 58.977 41.667 0.00 0.00 0.00 2.57
2581 6660 4.294970 AGGGATTTGGAGTTTAGGGTTCAT 59.705 41.667 0.00 0.00 0.00 2.57
2582 6661 3.660669 AGGGATTTGGAGTTTAGGGTTCA 59.339 43.478 0.00 0.00 0.00 3.18
2583 6662 4.317530 AGGGATTTGGAGTTTAGGGTTC 57.682 45.455 0.00 0.00 0.00 3.62
2584 6663 5.871324 TTAGGGATTTGGAGTTTAGGGTT 57.129 39.130 0.00 0.00 0.00 4.11
2585 6664 5.871324 TTTAGGGATTTGGAGTTTAGGGT 57.129 39.130 0.00 0.00 0.00 4.34
2586 6665 7.733773 AATTTTAGGGATTTGGAGTTTAGGG 57.266 36.000 0.00 0.00 0.00 3.53
2587 6666 8.414003 GCTAATTTTAGGGATTTGGAGTTTAGG 58.586 37.037 0.00 0.00 0.00 2.69
2588 6667 8.966868 TGCTAATTTTAGGGATTTGGAGTTTAG 58.033 33.333 0.00 0.00 0.00 1.85
2589 6668 8.745590 GTGCTAATTTTAGGGATTTGGAGTTTA 58.254 33.333 0.00 0.00 0.00 2.01
2590 6669 7.310423 GGTGCTAATTTTAGGGATTTGGAGTTT 60.310 37.037 0.00 0.00 0.00 2.66
2591 6670 6.154534 GGTGCTAATTTTAGGGATTTGGAGTT 59.845 38.462 0.00 0.00 0.00 3.01
2592 6671 5.656859 GGTGCTAATTTTAGGGATTTGGAGT 59.343 40.000 0.00 0.00 0.00 3.85
2593 6672 5.069119 GGGTGCTAATTTTAGGGATTTGGAG 59.931 44.000 0.00 0.00 0.00 3.86
2594 6673 4.959839 GGGTGCTAATTTTAGGGATTTGGA 59.040 41.667 0.00 0.00 0.00 3.53
2595 6674 4.100963 GGGGTGCTAATTTTAGGGATTTGG 59.899 45.833 0.00 0.00 0.00 3.28
2596 6675 4.202111 CGGGGTGCTAATTTTAGGGATTTG 60.202 45.833 0.00 0.00 0.00 2.32
2597 6676 3.958147 CGGGGTGCTAATTTTAGGGATTT 59.042 43.478 0.00 0.00 0.00 2.17
2598 6677 3.053170 ACGGGGTGCTAATTTTAGGGATT 60.053 43.478 0.00 0.00 0.00 3.01
2599 6678 2.512476 ACGGGGTGCTAATTTTAGGGAT 59.488 45.455 0.00 0.00 0.00 3.85
2600 6679 1.917568 ACGGGGTGCTAATTTTAGGGA 59.082 47.619 0.00 0.00 0.00 4.20
2601 6680 2.092592 AGACGGGGTGCTAATTTTAGGG 60.093 50.000 0.00 0.00 0.00 3.53
2602 6681 3.277142 AGACGGGGTGCTAATTTTAGG 57.723 47.619 0.00 0.00 0.00 2.69
2603 6682 6.289064 AGATAAGACGGGGTGCTAATTTTAG 58.711 40.000 0.00 0.00 0.00 1.85
2604 6683 6.243216 AGATAAGACGGGGTGCTAATTTTA 57.757 37.500 0.00 0.00 0.00 1.52
2605 6684 5.112129 AGATAAGACGGGGTGCTAATTTT 57.888 39.130 0.00 0.00 0.00 1.82
2606 6685 4.772886 AGATAAGACGGGGTGCTAATTT 57.227 40.909 0.00 0.00 0.00 1.82
2607 6686 5.881923 TTAGATAAGACGGGGTGCTAATT 57.118 39.130 0.00 0.00 0.00 1.40
2608 6687 5.046520 GGATTAGATAAGACGGGGTGCTAAT 60.047 44.000 0.00 0.00 31.80 1.73
2609 6688 4.282703 GGATTAGATAAGACGGGGTGCTAA 59.717 45.833 0.00 0.00 0.00 3.09
2610 6689 3.830755 GGATTAGATAAGACGGGGTGCTA 59.169 47.826 0.00 0.00 0.00 3.49
2611 6690 2.633481 GGATTAGATAAGACGGGGTGCT 59.367 50.000 0.00 0.00 0.00 4.40
2612 6691 2.289506 GGGATTAGATAAGACGGGGTGC 60.290 54.545 0.00 0.00 0.00 5.01
2613 6692 2.029290 CGGGATTAGATAAGACGGGGTG 60.029 54.545 0.00 0.00 0.00 4.61
2614 6693 2.245582 CGGGATTAGATAAGACGGGGT 58.754 52.381 0.00 0.00 0.00 4.95
2615 6694 1.549170 CCGGGATTAGATAAGACGGGG 59.451 57.143 0.00 0.00 36.45 5.73
2616 6695 2.245582 ACCGGGATTAGATAAGACGGG 58.754 52.381 6.32 8.40 43.73 5.28
2617 6696 4.332428 AAACCGGGATTAGATAAGACGG 57.668 45.455 6.32 0.00 44.86 4.79
2618 6697 6.098017 GGATAAACCGGGATTAGATAAGACG 58.902 44.000 6.32 0.00 0.00 4.18
2619 6698 6.013984 TGGGATAAACCGGGATTAGATAAGAC 60.014 42.308 6.32 0.00 40.11 3.01
2620 6699 6.086095 TGGGATAAACCGGGATTAGATAAGA 58.914 40.000 6.32 0.00 40.11 2.10
2621 6700 6.368779 TGGGATAAACCGGGATTAGATAAG 57.631 41.667 6.32 0.00 40.11 1.73
2622 6701 6.466182 GGTTGGGATAAACCGGGATTAGATAA 60.466 42.308 6.32 0.00 40.28 1.75
2623 6702 5.013391 GGTTGGGATAAACCGGGATTAGATA 59.987 44.000 6.32 0.00 40.28 1.98
2624 6703 4.202535 GGTTGGGATAAACCGGGATTAGAT 60.203 45.833 6.32 0.00 40.28 1.98
2625 6704 3.136992 GGTTGGGATAAACCGGGATTAGA 59.863 47.826 6.32 0.00 40.28 2.10
2626 6705 3.483421 GGTTGGGATAAACCGGGATTAG 58.517 50.000 6.32 0.00 40.28 1.73
2627 6706 3.581265 GGTTGGGATAAACCGGGATTA 57.419 47.619 6.32 5.31 40.28 1.75
2628 6707 2.447408 GGTTGGGATAAACCGGGATT 57.553 50.000 6.32 2.71 40.28 3.01
2635 6714 2.496070 GCCAGAAAGGGTTGGGATAAAC 59.504 50.000 0.00 0.00 38.09 2.01
2636 6715 2.815158 GCCAGAAAGGGTTGGGATAAA 58.185 47.619 0.00 0.00 38.09 1.40
2637 6716 2.525105 GCCAGAAAGGGTTGGGATAA 57.475 50.000 0.00 0.00 38.09 1.75
2646 6725 1.606531 CCTCCTCAGCCAGAAAGGG 59.393 63.158 0.00 0.00 38.09 3.95
2647 6726 1.077858 GCCTCCTCAGCCAGAAAGG 60.078 63.158 0.00 0.00 41.84 3.11
2648 6727 1.449246 CGCCTCCTCAGCCAGAAAG 60.449 63.158 0.00 0.00 0.00 2.62
2649 6728 1.768684 AACGCCTCCTCAGCCAGAAA 61.769 55.000 0.00 0.00 0.00 2.52
2650 6729 1.768684 AAACGCCTCCTCAGCCAGAA 61.769 55.000 0.00 0.00 0.00 3.02
2651 6730 2.217038 AAACGCCTCCTCAGCCAGA 61.217 57.895 0.00 0.00 0.00 3.86
2652 6731 2.037136 CAAACGCCTCCTCAGCCAG 61.037 63.158 0.00 0.00 0.00 4.85
2653 6732 2.032528 CAAACGCCTCCTCAGCCA 59.967 61.111 0.00 0.00 0.00 4.75
2654 6733 2.032681 ACAAACGCCTCCTCAGCC 59.967 61.111 0.00 0.00 0.00 4.85
2655 6734 2.035442 GGACAAACGCCTCCTCAGC 61.035 63.158 0.00 0.00 0.00 4.26
2656 6735 1.376037 GGGACAAACGCCTCCTCAG 60.376 63.158 0.00 0.00 0.00 3.35
2657 6736 2.747686 GGGACAAACGCCTCCTCA 59.252 61.111 0.00 0.00 0.00 3.86
2658 6737 2.046217 GGGGACAAACGCCTCCTC 60.046 66.667 0.00 0.00 46.34 3.71
2663 6742 3.047877 CTGACGGGGACAAACGCC 61.048 66.667 0.00 0.00 46.38 5.68
2664 6743 2.798148 ATCCTGACGGGGACAAACGC 62.798 60.000 0.00 0.00 38.30 4.84
2665 6744 0.321298 AATCCTGACGGGGACAAACG 60.321 55.000 0.00 0.00 38.30 3.60
2666 6745 1.165270 CAATCCTGACGGGGACAAAC 58.835 55.000 0.00 0.00 38.30 2.93
2667 6746 0.608035 GCAATCCTGACGGGGACAAA 60.608 55.000 0.00 0.00 38.30 2.83
2668 6747 1.002624 GCAATCCTGACGGGGACAA 60.003 57.895 0.00 0.00 38.30 3.18
2669 6748 2.220586 TGCAATCCTGACGGGGACA 61.221 57.895 0.00 0.00 38.30 4.02
2670 6749 1.745489 GTGCAATCCTGACGGGGAC 60.745 63.158 0.00 0.00 38.30 4.46
2671 6750 1.561769 ATGTGCAATCCTGACGGGGA 61.562 55.000 0.00 0.00 39.95 4.81
2672 6751 1.077501 ATGTGCAATCCTGACGGGG 60.078 57.895 0.00 0.00 35.33 5.73
2673 6752 0.677731 ACATGTGCAATCCTGACGGG 60.678 55.000 0.00 0.00 0.00 5.28
2674 6753 2.022764 TACATGTGCAATCCTGACGG 57.977 50.000 9.11 0.00 0.00 4.79
2675 6754 2.741517 TGTTACATGTGCAATCCTGACG 59.258 45.455 9.11 0.00 0.00 4.35
2676 6755 4.002982 TCTGTTACATGTGCAATCCTGAC 58.997 43.478 9.11 0.00 0.00 3.51
2677 6756 4.020307 TCTCTGTTACATGTGCAATCCTGA 60.020 41.667 9.11 0.59 0.00 3.86
2678 6757 4.256110 TCTCTGTTACATGTGCAATCCTG 58.744 43.478 9.11 0.00 0.00 3.86
2679 6758 4.558226 TCTCTGTTACATGTGCAATCCT 57.442 40.909 9.11 0.00 0.00 3.24
2680 6759 5.824904 AATCTCTGTTACATGTGCAATCC 57.175 39.130 9.11 0.00 0.00 3.01
2681 6760 7.708322 TCTCTAATCTCTGTTACATGTGCAATC 59.292 37.037 9.11 0.00 0.00 2.67
2682 6761 7.559486 TCTCTAATCTCTGTTACATGTGCAAT 58.441 34.615 9.11 0.00 0.00 3.56
2683 6762 6.935167 TCTCTAATCTCTGTTACATGTGCAA 58.065 36.000 9.11 0.00 0.00 4.08
2684 6763 6.530019 TCTCTAATCTCTGTTACATGTGCA 57.470 37.500 9.11 6.68 0.00 4.57
2685 6764 7.834068 TTTCTCTAATCTCTGTTACATGTGC 57.166 36.000 9.11 1.72 0.00 4.57
2686 6765 8.660373 GGTTTTCTCTAATCTCTGTTACATGTG 58.340 37.037 9.11 0.00 0.00 3.21
2687 6766 7.545965 CGGTTTTCTCTAATCTCTGTTACATGT 59.454 37.037 2.69 2.69 0.00 3.21
2688 6767 7.759886 TCGGTTTTCTCTAATCTCTGTTACATG 59.240 37.037 0.00 0.00 0.00 3.21
2689 6768 7.837863 TCGGTTTTCTCTAATCTCTGTTACAT 58.162 34.615 0.00 0.00 0.00 2.29
2690 6769 7.223260 TCGGTTTTCTCTAATCTCTGTTACA 57.777 36.000 0.00 0.00 0.00 2.41
2691 6770 8.705048 ATTCGGTTTTCTCTAATCTCTGTTAC 57.295 34.615 0.00 0.00 0.00 2.50
2693 6772 8.532819 ACTATTCGGTTTTCTCTAATCTCTGTT 58.467 33.333 0.00 0.00 0.00 3.16
2694 6773 8.068892 ACTATTCGGTTTTCTCTAATCTCTGT 57.931 34.615 0.00 0.00 0.00 3.41
2695 6774 8.934507 AACTATTCGGTTTTCTCTAATCTCTG 57.065 34.615 0.00 0.00 0.00 3.35
2696 6775 9.945904 AAAACTATTCGGTTTTCTCTAATCTCT 57.054 29.630 0.00 0.00 43.25 3.10
2697 6776 9.974750 CAAAACTATTCGGTTTTCTCTAATCTC 57.025 33.333 2.88 0.00 44.40 2.75
2698 6777 8.451748 GCAAAACTATTCGGTTTTCTCTAATCT 58.548 33.333 2.88 0.00 44.40 2.40
2699 6778 8.234546 TGCAAAACTATTCGGTTTTCTCTAATC 58.765 33.333 2.88 0.00 44.40 1.75
2700 6779 8.106247 TGCAAAACTATTCGGTTTTCTCTAAT 57.894 30.769 2.88 0.00 44.40 1.73
2701 6780 7.227910 ACTGCAAAACTATTCGGTTTTCTCTAA 59.772 33.333 2.88 0.00 44.40 2.10
2702 6781 6.708949 ACTGCAAAACTATTCGGTTTTCTCTA 59.291 34.615 2.88 0.00 44.40 2.43
2703 6782 5.531287 ACTGCAAAACTATTCGGTTTTCTCT 59.469 36.000 2.88 0.00 44.40 3.10
2704 6783 5.625311 CACTGCAAAACTATTCGGTTTTCTC 59.375 40.000 2.88 0.54 44.40 2.87
2705 6784 5.507315 CCACTGCAAAACTATTCGGTTTTCT 60.507 40.000 2.88 0.00 44.40 2.52
2706 6785 4.679654 CCACTGCAAAACTATTCGGTTTTC 59.320 41.667 2.88 0.95 44.40 2.29
2707 6786 4.500716 CCCACTGCAAAACTATTCGGTTTT 60.501 41.667 0.00 0.00 46.28 2.43
2708 6787 3.005367 CCCACTGCAAAACTATTCGGTTT 59.995 43.478 0.00 0.00 40.59 3.27
2709 6788 2.556622 CCCACTGCAAAACTATTCGGTT 59.443 45.455 0.00 0.00 0.00 4.44
2710 6789 2.159382 CCCACTGCAAAACTATTCGGT 58.841 47.619 0.00 0.00 0.00 4.69
2711 6790 2.432444 TCCCACTGCAAAACTATTCGG 58.568 47.619 0.00 0.00 0.00 4.30
2712 6791 5.116180 TCTATCCCACTGCAAAACTATTCG 58.884 41.667 0.00 0.00 0.00 3.34
2713 6792 6.016777 CCATCTATCCCACTGCAAAACTATTC 60.017 42.308 0.00 0.00 0.00 1.75
2714 6793 5.829924 CCATCTATCCCACTGCAAAACTATT 59.170 40.000 0.00 0.00 0.00 1.73
2715 6794 5.132648 TCCATCTATCCCACTGCAAAACTAT 59.867 40.000 0.00 0.00 0.00 2.12
2716 6795 4.473196 TCCATCTATCCCACTGCAAAACTA 59.527 41.667 0.00 0.00 0.00 2.24
2717 6796 3.266772 TCCATCTATCCCACTGCAAAACT 59.733 43.478 0.00 0.00 0.00 2.66
2718 6797 3.620488 TCCATCTATCCCACTGCAAAAC 58.380 45.455 0.00 0.00 0.00 2.43
2719 6798 3.523157 TCTCCATCTATCCCACTGCAAAA 59.477 43.478 0.00 0.00 0.00 2.44
2720 6799 3.114606 TCTCCATCTATCCCACTGCAAA 58.885 45.455 0.00 0.00 0.00 3.68
2721 6800 2.435805 GTCTCCATCTATCCCACTGCAA 59.564 50.000 0.00 0.00 0.00 4.08
2722 6801 2.042464 GTCTCCATCTATCCCACTGCA 58.958 52.381 0.00 0.00 0.00 4.41
2723 6802 2.324541 AGTCTCCATCTATCCCACTGC 58.675 52.381 0.00 0.00 0.00 4.40
2724 6803 4.282195 GGTAAGTCTCCATCTATCCCACTG 59.718 50.000 0.00 0.00 0.00 3.66
2725 6804 4.484912 GGTAAGTCTCCATCTATCCCACT 58.515 47.826 0.00 0.00 0.00 4.00
2726 6805 3.256136 CGGTAAGTCTCCATCTATCCCAC 59.744 52.174 0.00 0.00 0.00 4.61
2727 6806 3.139584 TCGGTAAGTCTCCATCTATCCCA 59.860 47.826 0.00 0.00 0.00 4.37
2728 6807 3.764218 TCGGTAAGTCTCCATCTATCCC 58.236 50.000 0.00 0.00 0.00 3.85
2729 6808 4.828387 ACTTCGGTAAGTCTCCATCTATCC 59.172 45.833 0.00 0.00 42.42 2.59
2730 6809 5.278561 CCACTTCGGTAAGTCTCCATCTATC 60.279 48.000 0.00 0.00 44.28 2.08
2731 6810 4.585162 CCACTTCGGTAAGTCTCCATCTAT 59.415 45.833 0.00 0.00 44.28 1.98
2732 6811 3.952323 CCACTTCGGTAAGTCTCCATCTA 59.048 47.826 0.00 0.00 44.28 1.98
2733 6812 2.761208 CCACTTCGGTAAGTCTCCATCT 59.239 50.000 0.00 0.00 44.28 2.90
2734 6813 2.738964 GCCACTTCGGTAAGTCTCCATC 60.739 54.545 0.00 0.00 44.28 3.51
2735 6814 1.207329 GCCACTTCGGTAAGTCTCCAT 59.793 52.381 0.00 0.00 44.28 3.41
2736 6815 0.606604 GCCACTTCGGTAAGTCTCCA 59.393 55.000 0.00 0.00 44.28 3.86
2737 6816 0.896226 AGCCACTTCGGTAAGTCTCC 59.104 55.000 0.00 0.00 44.28 3.71
2738 6817 1.272769 ACAGCCACTTCGGTAAGTCTC 59.727 52.381 0.00 0.00 44.28 3.36
2739 6818 1.339097 ACAGCCACTTCGGTAAGTCT 58.661 50.000 0.00 0.00 44.28 3.24
2740 6819 2.067013 GAACAGCCACTTCGGTAAGTC 58.933 52.381 0.00 0.00 44.28 3.01
2742 6821 2.163818 TGAACAGCCACTTCGGTAAG 57.836 50.000 0.00 0.00 38.77 2.34
2743 6822 2.623878 TTGAACAGCCACTTCGGTAA 57.376 45.000 0.00 0.00 36.97 2.85
2744 6823 2.301870 AGATTGAACAGCCACTTCGGTA 59.698 45.455 0.00 0.00 36.97 4.02
2745 6824 1.072331 AGATTGAACAGCCACTTCGGT 59.928 47.619 0.00 0.00 36.97 4.69
2746 6825 1.813513 AGATTGAACAGCCACTTCGG 58.186 50.000 0.00 0.00 38.11 4.30
2747 6826 3.904136 AAAGATTGAACAGCCACTTCG 57.096 42.857 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.