Multiple sequence alignment - TraesCS3A01G419900
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS3A01G419900
chr3A
100.000
2842
0
0
1
2842
661790512
661793353
0.000000e+00
5249
1
TraesCS3A01G419900
chr3D
93.458
2889
121
20
1
2842
527146095
527148962
0.000000e+00
4226
2
TraesCS3A01G419900
chr3D
93.130
131
8
1
2644
2774
45491604
45491733
1.040000e-44
191
3
TraesCS3A01G419900
chr3D
90.196
102
5
3
2131
2229
37760915
37760816
8.260000e-26
128
4
TraesCS3A01G419900
chr3B
91.713
2908
138
41
1
2842
696977019
696979889
0.000000e+00
3940
5
TraesCS3A01G419900
chr3B
93.130
131
8
1
2644
2774
736416002
736415873
1.040000e-44
191
6
TraesCS3A01G419900
chr3B
91.089
101
9
0
2129
2229
60259651
60259751
1.370000e-28
137
7
TraesCS3A01G419900
chr3B
91.753
97
8
0
2131
2227
60259751
60259655
4.940000e-28
135
8
TraesCS3A01G419900
chr6A
92.366
131
9
1
2644
2774
60154254
60154383
4.840000e-43
185
9
TraesCS3A01G419900
chr7B
91.667
132
9
2
2644
2775
164156734
164156605
6.250000e-42
182
10
TraesCS3A01G419900
chr4A
91.603
131
10
1
2644
2774
614520103
614520232
2.250000e-41
180
11
TraesCS3A01G419900
chr2B
90.840
131
11
1
2644
2774
296049278
296049149
1.050000e-39
174
12
TraesCS3A01G419900
chr7A
90.076
131
11
2
2644
2774
672455780
672455652
4.870000e-38
169
13
TraesCS3A01G419900
chr5A
90.909
99
9
0
2132
2230
533944187
533944285
1.780000e-27
134
14
TraesCS3A01G419900
chr1A
90.722
97
9
0
2132
2228
481924517
481924421
2.300000e-26
130
15
TraesCS3A01G419900
chr1A
88.679
106
9
3
2125
2228
481924413
481924517
2.970000e-25
126
16
TraesCS3A01G419900
chr1D
88.571
105
10
2
2126
2228
446426970
446426866
2.970000e-25
126
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS3A01G419900
chr3A
661790512
661793353
2841
False
5249
5249
100.000
1
2842
1
chr3A.!!$F1
2841
1
TraesCS3A01G419900
chr3D
527146095
527148962
2867
False
4226
4226
93.458
1
2842
1
chr3D.!!$F2
2841
2
TraesCS3A01G419900
chr3B
696977019
696979889
2870
False
3940
3940
91.713
1
2842
1
chr3B.!!$F2
2841
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
606
630
0.109153
TGCAGAGAAGGCACATGTGT
59.891
50.0
26.01
7.46
36.11
3.72
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2539
2616
0.327259
ATGAAGCCTGCTCTGCTGAA
59.673
50.0
0.0
0.0
39.48
3.02
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
91
100
0.250901
ACGCAGAAATCCAAGCACCT
60.251
50.000
0.00
0.00
0.00
4.00
172
181
1.609501
TTCCCACACCCTCCTCTCG
60.610
63.158
0.00
0.00
0.00
4.04
268
285
0.175760
CACCGTCATCACTACCCCAG
59.824
60.000
0.00
0.00
0.00
4.45
452
473
5.163933
GCATATGATTGGCGCAAATAATTGG
60.164
40.000
12.79
6.84
37.02
3.16
466
487
2.165357
AATTGGCCCATCTTCCCTTC
57.835
50.000
0.00
0.00
0.00
3.46
469
490
2.009302
GGCCCATCTTCCCTTCCCT
61.009
63.158
0.00
0.00
0.00
4.20
470
491
1.534203
GCCCATCTTCCCTTCCCTC
59.466
63.158
0.00
0.00
0.00
4.30
472
493
0.624500
CCCATCTTCCCTTCCCTCCA
60.625
60.000
0.00
0.00
0.00
3.86
473
494
1.527457
CCATCTTCCCTTCCCTCCAT
58.473
55.000
0.00
0.00
0.00
3.41
474
495
1.144503
CCATCTTCCCTTCCCTCCATG
59.855
57.143
0.00
0.00
0.00
3.66
475
496
1.144503
CATCTTCCCTTCCCTCCATGG
59.855
57.143
4.97
4.97
0.00
3.66
476
497
1.228510
CTTCCCTTCCCTCCATGGC
59.771
63.158
6.96
0.00
0.00
4.40
480
504
2.123982
CTTCCCTCCATGGCCTGC
60.124
66.667
6.96
0.00
0.00
4.85
490
514
0.543277
CATGGCCTGCCTCTGTAGAA
59.457
55.000
9.97
0.00
36.94
2.10
516
540
3.217626
AGGAACAAAAAGAGGTGAGCAG
58.782
45.455
0.00
0.00
0.00
4.24
518
542
3.632145
GGAACAAAAAGAGGTGAGCAGAA
59.368
43.478
0.00
0.00
0.00
3.02
521
545
2.872245
CAAAAAGAGGTGAGCAGAACGA
59.128
45.455
0.00
0.00
0.00
3.85
533
557
2.996621
AGCAGAACGACTAATGAAGCAC
59.003
45.455
0.00
0.00
0.00
4.40
540
564
8.177663
CAGAACGACTAATGAAGCACATTATTT
58.822
33.333
13.81
7.02
46.22
1.40
545
569
8.817100
CGACTAATGAAGCACATTATTTGACTA
58.183
33.333
13.81
0.00
46.22
2.59
606
630
0.109153
TGCAGAGAAGGCACATGTGT
59.891
50.000
26.01
7.46
36.11
3.72
711
735
0.374758
GTGTGTGCGTGCATATGAGG
59.625
55.000
6.97
0.00
0.00
3.86
752
777
2.593956
GGTCACCTCAGTCCCCACC
61.594
68.421
0.00
0.00
0.00
4.61
753
778
2.203938
TCACCTCAGTCCCCACCC
60.204
66.667
0.00
0.00
0.00
4.61
777
804
1.338136
CCGCCCCTCTCTACACCATT
61.338
60.000
0.00
0.00
0.00
3.16
807
834
4.294523
TGGCACAAGGATACGCAC
57.705
55.556
0.00
0.00
46.39
5.34
808
835
1.373059
TGGCACAAGGATACGCACA
59.627
52.632
0.00
0.00
46.39
4.57
809
836
0.953471
TGGCACAAGGATACGCACAC
60.953
55.000
0.00
0.00
46.39
3.82
810
837
0.953471
GGCACAAGGATACGCACACA
60.953
55.000
0.00
0.00
46.39
3.72
811
838
1.086696
GCACAAGGATACGCACACAT
58.913
50.000
0.00
0.00
46.39
3.21
812
839
2.276201
GCACAAGGATACGCACACATA
58.724
47.619
0.00
0.00
46.39
2.29
813
840
2.675844
GCACAAGGATACGCACACATAA
59.324
45.455
0.00
0.00
46.39
1.90
814
841
3.312421
GCACAAGGATACGCACACATAAT
59.688
43.478
0.00
0.00
46.39
1.28
922
957
2.244000
GCACTTGCGACCTTAAGCA
58.756
52.632
0.00
0.00
42.15
3.91
929
964
2.143122
TGCGACCTTAAGCAGTTTCTG
58.857
47.619
0.00
0.00
38.59
3.02
935
970
6.091713
GCGACCTTAAGCAGTTTCTGTAATTA
59.908
38.462
0.00
0.00
33.43
1.40
942
977
6.002062
AGCAGTTTCTGTAATTACAAGCAC
57.998
37.500
18.55
14.00
35.50
4.40
945
980
6.142817
CAGTTTCTGTAATTACAAGCACACC
58.857
40.000
18.55
4.48
35.50
4.16
946
981
6.017109
CAGTTTCTGTAATTACAAGCACACCT
60.017
38.462
18.55
6.41
35.50
4.00
947
982
6.204882
AGTTTCTGTAATTACAAGCACACCTC
59.795
38.462
18.55
4.14
35.50
3.85
948
983
4.575885
TCTGTAATTACAAGCACACCTCC
58.424
43.478
18.55
0.00
35.50
4.30
949
984
4.041075
TCTGTAATTACAAGCACACCTCCA
59.959
41.667
18.55
0.00
35.50
3.86
950
985
4.917385
TGTAATTACAAGCACACCTCCAT
58.083
39.130
15.92
0.00
32.40
3.41
951
986
5.321102
TGTAATTACAAGCACACCTCCATT
58.679
37.500
15.92
0.00
32.40
3.16
977
1012
1.896465
CTCCCGTTCCCTATCCATCTC
59.104
57.143
0.00
0.00
0.00
2.75
978
1013
1.503784
TCCCGTTCCCTATCCATCTCT
59.496
52.381
0.00
0.00
0.00
3.10
979
1014
1.896465
CCCGTTCCCTATCCATCTCTC
59.104
57.143
0.00
0.00
0.00
3.20
1077
1112
1.989966
CTTGCTTGCTCATCGGCCAG
61.990
60.000
2.24
0.00
0.00
4.85
1122
1157
2.906389
TGGTAGCATCTCAGGTTTCACT
59.094
45.455
0.00
0.00
0.00
3.41
1131
1166
4.697514
TCTCAGGTTTCACTTCTTCACTG
58.302
43.478
0.00
0.00
0.00
3.66
1140
1175
6.942532
TTCACTTCTTCACTGCAAATACTT
57.057
33.333
0.00
0.00
0.00
2.24
1141
1176
6.942532
TCACTTCTTCACTGCAAATACTTT
57.057
33.333
0.00
0.00
0.00
2.66
1150
1185
6.494842
TCACTGCAAATACTTTGTGTTCTTC
58.505
36.000
0.00
0.00
42.56
2.87
1165
1200
4.798387
GTGTTCTTCGTTTGTTCTTGCATT
59.202
37.500
0.00
0.00
0.00
3.56
1212
1247
6.494893
TTCTTTAGTGTGCATATGTTCACC
57.505
37.500
20.41
9.64
32.51
4.02
1247
1282
8.021973
ACTAGTTTCACTTCAATCTACTGTACG
58.978
37.037
0.00
0.00
0.00
3.67
1351
1386
8.524487
ACATATGCCATCTAGTTAGTACTAAGC
58.476
37.037
15.68
13.37
36.46
3.09
1441
1492
8.608844
ACTTGCTTGAAATACTATATACCTGC
57.391
34.615
0.00
0.00
0.00
4.85
1530
1584
6.939163
TCCTACAGTTAGTACGAGAAGTTCTT
59.061
38.462
6.88
0.00
32.55
2.52
1546
1600
8.281212
AGAAGTTCTTAGAACAAGAGCAAAAA
57.719
30.769
24.57
0.00
31.08
1.94
1547
1601
8.401709
AGAAGTTCTTAGAACAAGAGCAAAAAG
58.598
33.333
24.57
0.00
31.08
2.27
1676
1730
3.008485
AGCAGGGTCTAAACAAGGAGAAG
59.992
47.826
0.00
0.00
0.00
2.85
1748
1802
0.672401
CGTACAACGAATGCAGGGGT
60.672
55.000
0.00
0.00
46.05
4.95
1778
1832
0.038159
AGTGTACCGCTGAGCAAGTC
60.038
55.000
4.88
0.00
0.00
3.01
2179
2234
4.687483
TCGCTGGTTTAGTACAAAGTTAGC
59.313
41.667
0.00
0.00
0.00
3.09
2313
2368
7.147983
GCTTAGAACTTCAGACTGGATCTTCTA
60.148
40.741
1.81
5.02
34.41
2.10
2496
2573
8.288208
GGAGCAGTAGATTCATATTGACAAATG
58.712
37.037
0.00
0.00
0.00
2.32
2514
2591
9.123902
TGACAAATGAGAAAAGAAAGAAGATGA
57.876
29.630
0.00
0.00
0.00
2.92
2559
2636
0.392595
TCAGCAGAGCAGGCTTCATG
60.393
55.000
0.00
0.00
40.23
3.07
2639
2718
7.787725
AGCTGTAGCATAGGTAATAAACAAC
57.212
36.000
6.65
0.00
45.16
3.32
2736
2815
8.682936
AACAGTTGAAGATTTGTCTCAATAGT
57.317
30.769
0.00
0.00
0.00
2.12
2737
2816
8.092521
ACAGTTGAAGATTTGTCTCAATAGTG
57.907
34.615
0.00
0.00
0.00
2.74
2770
2849
7.490657
TTACCAATAGCTCTTTTACTGGAGA
57.509
36.000
0.00
0.00
0.00
3.71
2771
2850
5.983540
ACCAATAGCTCTTTTACTGGAGAG
58.016
41.667
0.00
0.00
41.80
3.20
2776
2855
2.093394
GCTCTTTTACTGGAGAGGGGTC
60.093
54.545
2.93
0.00
39.78
4.46
2784
2863
2.447714
GGAGAGGGGTCAGGATGCC
61.448
68.421
0.00
0.00
34.76
4.40
2786
2865
1.383803
AGAGGGGTCAGGATGCCTC
60.384
63.158
0.00
0.00
41.48
4.70
2792
2871
2.493687
GGGGTCAGGATGCCTCTATACT
60.494
54.545
0.00
0.00
34.76
2.12
2804
2883
3.410508
CCTCTATACTACGGGACACTCC
58.589
54.545
0.00
0.00
35.23
3.85
2825
2904
6.783977
ACTCCGGGGTAACTCATGTATATTTA
59.216
38.462
4.23
0.00
36.02
1.40
2828
2907
8.662255
TCCGGGGTAACTCATGTATATTTAAAT
58.338
33.333
0.00
5.89
36.02
1.40
2829
2908
9.947433
CCGGGGTAACTCATGTATATTTAAATA
57.053
33.333
10.27
10.27
36.02
1.40
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
23
24
2.507992
CGCTCTCCTTCAGCACGG
60.508
66.667
0.00
0.00
36.61
4.94
30
31
3.859411
TTTCTTCTCTCGCTCTCCTTC
57.141
47.619
0.00
0.00
0.00
3.46
268
285
4.224762
AGGAACTAACTACCTAGGATGCC
58.775
47.826
17.98
3.45
36.02
4.40
452
473
1.534203
GAGGGAAGGGAAGATGGGC
59.466
63.158
0.00
0.00
0.00
5.36
466
487
4.201122
GAGGCAGGCCATGGAGGG
62.201
72.222
18.40
4.07
38.92
4.30
469
490
1.306911
TACAGAGGCAGGCCATGGA
60.307
57.895
18.40
4.69
38.92
3.41
470
491
1.147824
CTACAGAGGCAGGCCATGG
59.852
63.158
13.63
7.63
38.92
3.66
472
493
0.543749
GTTCTACAGAGGCAGGCCAT
59.456
55.000
13.63
0.00
38.92
4.40
473
494
0.835971
TGTTCTACAGAGGCAGGCCA
60.836
55.000
13.63
0.00
38.92
5.36
474
495
1.983224
TGTTCTACAGAGGCAGGCC
59.017
57.895
0.97
0.97
0.00
5.19
490
514
4.855340
TCACCTCTTTTTGTTCCTTCTGT
58.145
39.130
0.00
0.00
0.00
3.41
540
564
6.891388
TCCCAGTTTTGAACTTAAGTAGTCA
58.109
36.000
8.92
7.23
40.46
3.41
606
630
0.555769
ACCTTTGTCCCTTCTTGCCA
59.444
50.000
0.00
0.00
0.00
4.92
711
735
4.154347
CAGGTGGCTCCGCTCTCC
62.154
72.222
0.00
0.00
41.99
3.71
760
785
0.912486
ACAATGGTGTAGAGAGGGGC
59.088
55.000
0.00
0.00
35.72
5.80
762
787
2.419297
GCAGACAATGGTGTAGAGAGGG
60.419
54.545
0.00
0.00
38.41
4.30
764
789
3.599730
TGCAGACAATGGTGTAGAGAG
57.400
47.619
0.00
0.00
38.41
3.20
765
790
3.369787
CCATGCAGACAATGGTGTAGAGA
60.370
47.826
0.00
0.00
38.41
3.10
777
804
0.327591
TGTGCCATACCATGCAGACA
59.672
50.000
0.00
0.00
38.34
3.41
797
824
7.064609
GCATATGTAATTATGTGTGCGTATCCT
59.935
37.037
4.29
0.00
33.07
3.24
803
830
6.673076
GCCTAGCATATGTAATTATGTGTGCG
60.673
42.308
4.29
4.65
36.53
5.34
807
834
8.098220
TGTTGCCTAGCATATGTAATTATGTG
57.902
34.615
4.29
0.00
38.76
3.21
808
835
7.094634
GCTGTTGCCTAGCATATGTAATTATGT
60.095
37.037
4.29
0.00
38.76
2.29
809
836
7.246311
GCTGTTGCCTAGCATATGTAATTATG
58.754
38.462
4.29
0.00
38.76
1.90
810
837
6.092670
CGCTGTTGCCTAGCATATGTAATTAT
59.907
38.462
4.29
0.00
41.18
1.28
811
838
5.408299
CGCTGTTGCCTAGCATATGTAATTA
59.592
40.000
4.29
0.00
41.18
1.40
812
839
4.214119
CGCTGTTGCCTAGCATATGTAATT
59.786
41.667
4.29
0.00
41.18
1.40
813
840
3.748048
CGCTGTTGCCTAGCATATGTAAT
59.252
43.478
4.29
0.00
41.18
1.89
814
841
3.130633
CGCTGTTGCCTAGCATATGTAA
58.869
45.455
4.29
0.00
41.18
2.41
855
882
1.061711
CAAGAGCTCTTGTGCGTATGC
59.938
52.381
37.56
0.00
46.11
3.14
907
942
2.808543
AGAAACTGCTTAAGGTCGCAAG
59.191
45.455
4.29
0.00
35.46
4.01
912
947
8.319143
TGTAATTACAGAAACTGCTTAAGGTC
57.681
34.615
14.35
0.00
34.37
3.85
913
948
8.685838
TTGTAATTACAGAAACTGCTTAAGGT
57.314
30.769
17.36
0.00
37.52
3.50
922
957
6.062095
AGGTGTGCTTGTAATTACAGAAACT
58.938
36.000
17.36
8.58
37.52
2.66
929
964
5.163652
GGAATGGAGGTGTGCTTGTAATTAC
60.164
44.000
8.75
8.75
0.00
1.89
935
970
0.478072
TGGAATGGAGGTGTGCTTGT
59.522
50.000
0.00
0.00
0.00
3.16
942
977
0.475906
GGGAGGATGGAATGGAGGTG
59.524
60.000
0.00
0.00
0.00
4.00
945
980
0.839946
AACGGGAGGATGGAATGGAG
59.160
55.000
0.00
0.00
0.00
3.86
946
981
0.837272
GAACGGGAGGATGGAATGGA
59.163
55.000
0.00
0.00
0.00
3.41
947
982
0.179018
GGAACGGGAGGATGGAATGG
60.179
60.000
0.00
0.00
0.00
3.16
948
983
0.179018
GGGAACGGGAGGATGGAATG
60.179
60.000
0.00
0.00
0.00
2.67
949
984
0.327576
AGGGAACGGGAGGATGGAAT
60.328
55.000
0.00
0.00
0.00
3.01
950
985
0.340558
TAGGGAACGGGAGGATGGAA
59.659
55.000
0.00
0.00
0.00
3.53
951
986
0.566176
ATAGGGAACGGGAGGATGGA
59.434
55.000
0.00
0.00
0.00
3.41
978
1013
0.323360
CCCGCCTTCTCCAAAATGGA
60.323
55.000
0.00
0.00
45.98
3.41
979
1014
0.611896
ACCCGCCTTCTCCAAAATGG
60.612
55.000
0.00
0.00
39.43
3.16
994
1029
2.653953
CTACCACCGGCCATAACCCG
62.654
65.000
0.00
0.00
45.17
5.28
1077
1112
2.338785
GCCTTGGTTGCAGAGAGCC
61.339
63.158
0.00
0.00
44.83
4.70
1104
1139
5.012046
TGAAGAAGTGAAACCTGAGATGCTA
59.988
40.000
0.00
0.00
37.80
3.49
1140
1175
4.162812
GCAAGAACAAACGAAGAACACAA
58.837
39.130
0.00
0.00
0.00
3.33
1141
1176
3.189495
TGCAAGAACAAACGAAGAACACA
59.811
39.130
0.00
0.00
0.00
3.72
1150
1185
4.324402
GCCATTCTAATGCAAGAACAAACG
59.676
41.667
2.97
0.00
38.28
3.60
1165
1200
9.313118
GAAAGAAAAAGAAAACAAGCCATTCTA
57.687
29.630
0.00
0.00
33.26
2.10
1247
1282
1.555075
TGTTCTCCATAGTCTGCACCC
59.445
52.381
0.00
0.00
0.00
4.61
1351
1386
5.122869
TGCTATAGTACCTATAAGAACGGCG
59.877
44.000
4.80
4.80
29.87
6.46
1441
1492
2.094752
CGCTTACCAAAAACTCCATGGG
60.095
50.000
13.02
5.22
38.58
4.00
1530
1584
5.048504
CCATGCTCTTTTTGCTCTTGTTCTA
60.049
40.000
0.00
0.00
0.00
2.10
1676
1730
2.774799
CCTTGCATACTTGGGCGGC
61.775
63.158
0.00
0.00
0.00
6.53
1748
1802
1.670674
GCGGTACACTTGGATCGACAA
60.671
52.381
0.00
0.00
0.00
3.18
1778
1832
1.666209
GGTCATTTGCATCCACCGGG
61.666
60.000
6.32
0.00
0.00
5.73
1896
1950
4.041075
AGAAGAGGAGACTGAAGGAAAACC
59.959
45.833
0.00
0.00
44.43
3.27
2179
2234
4.388773
TCGCTGATTTAGTACAAAGCTGTG
59.611
41.667
1.09
1.09
36.96
3.66
2313
2368
1.227556
GCACAGTTGGAGACCGTGT
60.228
57.895
0.00
0.00
38.62
4.49
2496
2573
9.218440
AGAAGTCATCATCTTCTTTCTTTTCTC
57.782
33.333
2.85
0.00
46.09
2.87
2500
2577
7.308469
GCACAGAAGTCATCATCTTCTTTCTTT
60.308
37.037
5.60
0.00
46.09
2.52
2514
2591
1.805869
GCAGTCTGCACAGAAGTCAT
58.194
50.000
20.16
0.00
44.26
3.06
2539
2616
0.327259
ATGAAGCCTGCTCTGCTGAA
59.673
50.000
0.00
0.00
39.48
3.02
2639
2718
2.496899
ATGCTCTGTTTGGTACTGGG
57.503
50.000
0.00
0.00
0.00
4.45
2770
2849
0.570218
ATAGAGGCATCCTGACCCCT
59.430
55.000
0.00
0.00
31.76
4.79
2771
2850
1.903183
GTATAGAGGCATCCTGACCCC
59.097
57.143
0.00
0.00
31.76
4.95
2776
2855
2.755655
CCCGTAGTATAGAGGCATCCTG
59.244
54.545
0.00
0.00
31.76
3.86
2784
2863
3.065655
CGGAGTGTCCCGTAGTATAGAG
58.934
54.545
0.00
0.00
44.23
2.43
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.