Multiple sequence alignment - TraesCS3A01G418300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G418300 chr3A 100.000 5541 0 0 1 5541 660231039 660236579 0.000000e+00 10233
1 TraesCS3A01G418300 chr3D 88.494 2451 175 36 2173 4574 526045078 526047470 0.000000e+00 2865
2 TraesCS3A01G418300 chr3D 85.366 1763 105 49 441 2181 526043347 526044978 0.000000e+00 1685
3 TraesCS3A01G418300 chr3D 90.129 618 46 6 4927 5541 526047809 526048414 0.000000e+00 789
4 TraesCS3A01G418300 chr3D 88.530 619 54 8 1 612 525824382 525823774 0.000000e+00 734
5 TraesCS3A01G418300 chr3B 89.038 1414 99 17 3189 4574 694321985 694323370 0.000000e+00 1701
6 TraesCS3A01G418300 chr3B 83.704 1215 100 37 841 2047 694320092 694321216 0.000000e+00 1057
7 TraesCS3A01G418300 chr3B 89.767 772 56 13 84 845 694317852 694318610 0.000000e+00 966
8 TraesCS3A01G418300 chr3B 91.086 617 39 9 4928 5541 694323657 694324260 0.000000e+00 821
9 TraesCS3A01G418300 chr3B 95.238 84 4 0 3118 3201 694321885 694321968 3.480000e-27 134
10 TraesCS3A01G418300 chr3B 86.885 122 10 5 4820 4939 694323515 694323632 1.250000e-26 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G418300 chr3A 660231039 660236579 5540 False 10233.000000 10233 100.000000 1 5541 1 chr3A.!!$F1 5540
1 TraesCS3A01G418300 chr3D 526043347 526048414 5067 False 1779.666667 2865 87.996333 441 5541 3 chr3D.!!$F1 5100
2 TraesCS3A01G418300 chr3D 525823774 525824382 608 True 734.000000 734 88.530000 1 612 1 chr3D.!!$R1 611
3 TraesCS3A01G418300 chr3B 694317852 694324260 6408 False 801.833333 1701 89.286333 84 5541 6 chr3B.!!$F1 5457

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 178 0.536460 GTTTTCGAGCCAGGGGTCAA 60.536 55.000 16.90 7.98 42.17 3.18 F
404 413 1.207089 TCATTTCTCGTGCCTAGGTGG 59.793 52.381 11.31 0.00 39.35 4.61 F
1190 2705 1.202313 GCCGTCGTCTCTCTGCTTATT 60.202 52.381 0.00 0.00 0.00 1.40 F
2210 3941 0.106894 GAGCCATAGAGGGGGAAACG 59.893 60.000 0.00 0.00 38.09 3.60 F
2773 4523 0.179100 GCTCAGCGGCATCTACAAGA 60.179 55.000 1.45 0.00 0.00 3.02 F
4178 5970 0.112606 TTGAGTCGTGGGACCTCTCT 59.887 55.000 0.00 0.00 44.54 3.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1190 2705 0.030773 GCCGTGCAGTATGATCGAGA 59.969 55.0 0.00 0.00 39.69 4.04 R
1206 2721 0.032130 AGGAGCATACGTATGTGCCG 59.968 55.0 30.63 10.83 43.65 5.69 R
2247 3978 0.037734 GGGTGGAATGGAAACCTCGT 59.962 55.0 0.00 0.00 34.24 4.18 R
4106 5898 0.109272 GGATGAACTGCGAGTCGACA 60.109 55.0 18.61 12.78 0.00 4.35 R
4283 6075 0.174845 TATCGTCCTTGTTCAGCCGG 59.825 55.0 0.00 0.00 0.00 6.13 R
5226 7074 0.179062 AATCAGCATCACCCGAGAGC 60.179 55.0 0.00 0.00 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 3.128415 TGTCTGTGTGGTTGTGTTCAATG 59.872 43.478 0.00 0.00 35.92 2.82
79 80 2.098934 TCTGTGTGGTTGTGTTCAATGC 59.901 45.455 0.00 0.00 35.92 3.56
97 98 2.028130 CCCATCTTCTCGCATTGCC 58.972 57.895 2.41 0.00 0.00 4.52
165 169 6.706270 TCATATTTATCTCAGGTTTTCGAGCC 59.294 38.462 0.00 0.00 0.00 4.70
174 178 0.536460 GTTTTCGAGCCAGGGGTCAA 60.536 55.000 16.90 7.98 42.17 3.18
201 205 4.122776 AGTGTAAGATGCTTATTCCTGCG 58.877 43.478 0.00 0.00 0.00 5.18
208 212 2.047061 TGCTTATTCCTGCGGAGGTAT 58.953 47.619 23.44 20.83 40.76 2.73
210 214 3.838317 TGCTTATTCCTGCGGAGGTATAT 59.162 43.478 23.44 16.17 40.76 0.86
321 325 4.442706 ACATCAAGGCCTAATAGACAACG 58.557 43.478 5.16 0.00 0.00 4.10
326 330 2.431057 AGGCCTAATAGACAACGTCAGG 59.569 50.000 1.29 0.00 34.60 3.86
337 342 2.046023 CGTCAGGCCAGGCAATGA 60.046 61.111 15.19 14.12 0.00 2.57
345 350 2.091166 AGGCCAGGCAATGAATATGGAA 60.091 45.455 15.19 0.00 32.55 3.53
348 353 4.713321 GGCCAGGCAATGAATATGGAATAT 59.287 41.667 15.19 0.00 42.49 1.28
404 413 1.207089 TCATTTCTCGTGCCTAGGTGG 59.793 52.381 11.31 0.00 39.35 4.61
424 433 4.519906 GGGAGGTAATTCTCATTCCCAA 57.480 45.455 2.57 0.00 43.04 4.12
437 446 5.586243 TCTCATTCCCAATTTCGACTCAATC 59.414 40.000 0.00 0.00 0.00 2.67
443 452 5.104109 TCCCAATTTCGACTCAATCCCTAAT 60.104 40.000 0.00 0.00 0.00 1.73
453 462 4.952335 ACTCAATCCCTAATGCCTTTTCAG 59.048 41.667 0.00 0.00 0.00 3.02
478 487 5.064441 ACTTGCTTATTTCCATGTTCTGC 57.936 39.130 0.00 0.00 0.00 4.26
591 603 9.533253 AATAATTCAAACTCAACTTCAAACTGG 57.467 29.630 0.00 0.00 0.00 4.00
593 605 7.639113 ATTCAAACTCAACTTCAAACTGGTA 57.361 32.000 0.00 0.00 0.00 3.25
615 630 8.797438 TGGTAAATGAATTGCATAGTGTACAAA 58.203 29.630 0.00 0.00 35.78 2.83
714 729 8.888579 ACTTTGCTAGTGTACATTATATCACC 57.111 34.615 0.00 0.00 35.19 4.02
726 741 9.148104 GTACATTATATCACCGTTAGGGATTTC 57.852 37.037 0.00 0.00 43.47 2.17
733 748 4.529377 TCACCGTTAGGGATTTCTACAACT 59.471 41.667 0.00 0.00 43.47 3.16
738 753 6.092259 CCGTTAGGGATTTCTACAACTTTGAG 59.908 42.308 0.00 0.00 38.47 3.02
740 755 7.549488 CGTTAGGGATTTCTACAACTTTGAGAT 59.451 37.037 0.00 0.00 0.00 2.75
751 766 8.721478 TCTACAACTTTGAGATCTTTTATGTGC 58.279 33.333 0.00 0.00 0.00 4.57
837 853 3.394674 TTCTTTGTGACACGGATGCTA 57.605 42.857 0.22 0.00 0.00 3.49
838 854 3.394674 TCTTTGTGACACGGATGCTAA 57.605 42.857 0.22 0.00 0.00 3.09
851 2353 5.732647 CACGGATGCTAAGAAAAACAATACG 59.267 40.000 0.00 0.00 0.00 3.06
866 2371 5.347012 ACAATACGTACTTCAAAAACGGG 57.653 39.130 0.00 0.00 40.81 5.28
884 2389 2.485835 CGGGAATGGAAATTAGGCCGTA 60.486 50.000 0.00 0.00 0.00 4.02
1011 2516 2.996734 CCACCAATGGCCACCACC 60.997 66.667 8.16 0.00 39.82 4.61
1012 2517 3.372730 CACCAATGGCCACCACCG 61.373 66.667 8.16 0.00 35.80 4.94
1190 2705 1.202313 GCCGTCGTCTCTCTGCTTATT 60.202 52.381 0.00 0.00 0.00 1.40
1203 2718 6.907741 TCTCTGCTTATTCTCGATCATACTG 58.092 40.000 0.00 0.00 0.00 2.74
1204 2719 5.465051 TCTGCTTATTCTCGATCATACTGC 58.535 41.667 0.00 0.00 0.00 4.40
1205 2720 5.010012 TCTGCTTATTCTCGATCATACTGCA 59.990 40.000 0.00 0.00 0.00 4.41
1206 2721 4.984785 TGCTTATTCTCGATCATACTGCAC 59.015 41.667 0.00 0.00 0.00 4.57
1207 2722 4.089208 GCTTATTCTCGATCATACTGCACG 59.911 45.833 0.00 0.00 0.00 5.34
1212 2727 0.805711 CGATCATACTGCACGGCACA 60.806 55.000 0.00 0.00 33.79 4.57
1227 2742 1.605712 GGCACATACGTATGCTCCTCC 60.606 57.143 30.68 20.63 41.74 4.30
1228 2743 1.605712 GCACATACGTATGCTCCTCCC 60.606 57.143 30.68 10.93 38.84 4.30
1234 2749 1.063567 ACGTATGCTCCTCCCTCTTCT 60.064 52.381 0.00 0.00 0.00 2.85
1236 2751 1.069978 GTATGCTCCTCCCTCTTCTGC 59.930 57.143 0.00 0.00 0.00 4.26
1237 2752 0.326427 ATGCTCCTCCCTCTTCTGCT 60.326 55.000 0.00 0.00 0.00 4.24
1238 2753 1.263342 TGCTCCTCCCTCTTCTGCTG 61.263 60.000 0.00 0.00 0.00 4.41
1239 2754 1.970352 GCTCCTCCCTCTTCTGCTGG 61.970 65.000 0.00 0.00 0.00 4.85
1240 2755 0.325110 CTCCTCCCTCTTCTGCTGGA 60.325 60.000 0.00 0.00 0.00 3.86
1242 2757 1.575788 TCCTCCCTCTTCTGCTGGATA 59.424 52.381 0.00 0.00 0.00 2.59
1247 2762 1.202580 CCTCTTCTGCTGGATAACCGG 60.203 57.143 0.00 0.00 44.87 5.28
1248 2763 1.757118 CTCTTCTGCTGGATAACCGGA 59.243 52.381 9.46 0.00 44.87 5.14
1249 2764 1.480954 TCTTCTGCTGGATAACCGGAC 59.519 52.381 9.46 0.00 44.87 4.79
1250 2765 0.174845 TTCTGCTGGATAACCGGACG 59.825 55.000 9.46 0.00 44.87 4.79
1251 2766 1.227263 CTGCTGGATAACCGGACGG 60.227 63.158 9.46 9.56 44.87 4.79
1469 2989 4.764336 TACGCCGTCGCCGTCAAG 62.764 66.667 3.86 0.00 39.88 3.02
1487 3007 1.004918 GTACAAGGTGCGTCTGCCT 60.005 57.895 0.00 0.00 41.78 4.75
1488 3008 1.005037 TACAAGGTGCGTCTGCCTG 60.005 57.895 0.00 0.00 41.78 4.85
1522 3044 4.081972 GCTCCCAGCTATCTATCGATTCAA 60.082 45.833 1.71 0.00 38.45 2.69
1538 3060 5.812127 TCGATTCAACTTGTATGATGACCAG 59.188 40.000 0.00 0.00 0.00 4.00
1540 3062 6.237942 CGATTCAACTTGTATGATGACCAGTC 60.238 42.308 0.00 0.00 0.00 3.51
1544 3066 6.998074 TCAACTTGTATGATGACCAGTCTTTT 59.002 34.615 0.00 0.00 0.00 2.27
1545 3067 7.502226 TCAACTTGTATGATGACCAGTCTTTTT 59.498 33.333 0.00 0.00 0.00 1.94
1612 3134 9.301897 TCTCTAGCTTCTGCATATTAAGATACA 57.698 33.333 0.00 0.00 42.74 2.29
1620 3142 8.742554 TCTGCATATTAAGATACATACACACG 57.257 34.615 0.00 0.00 0.00 4.49
1624 3146 7.201325 GCATATTAAGATACATACACACGACCG 60.201 40.741 0.00 0.00 0.00 4.79
1634 3156 0.303493 CACACGACCGAAACAAGTGG 59.697 55.000 0.00 0.00 37.16 4.00
1636 3158 1.227734 ACGACCGAAACAAGTGGGG 60.228 57.895 0.00 0.00 0.00 4.96
1671 3193 8.962884 AAAAAGAATGGAATGTAAGCAAAAGT 57.037 26.923 0.00 0.00 0.00 2.66
1697 3219 6.024552 TGAAAAACAATGAAGTGCCTATCC 57.975 37.500 0.00 0.00 0.00 2.59
1711 3233 2.878935 GCCTATCCGTAGAGGGAATCGA 60.879 54.545 0.00 0.00 40.09 3.59
1716 3238 2.621998 TCCGTAGAGGGAATCGACATTC 59.378 50.000 0.00 0.00 41.52 2.67
1717 3239 2.361119 CCGTAGAGGGAATCGACATTCA 59.639 50.000 1.49 0.00 40.41 2.57
1718 3240 3.005897 CCGTAGAGGGAATCGACATTCAT 59.994 47.826 1.49 0.00 40.41 2.57
1719 3241 3.983988 CGTAGAGGGAATCGACATTCATG 59.016 47.826 1.49 0.00 40.41 3.07
1720 3242 2.843701 AGAGGGAATCGACATTCATGC 58.156 47.619 1.49 0.00 40.41 4.06
1721 3243 2.437281 AGAGGGAATCGACATTCATGCT 59.563 45.455 1.49 0.00 40.41 3.79
1722 3244 2.547211 GAGGGAATCGACATTCATGCTG 59.453 50.000 1.49 0.00 40.41 4.41
1769 3291 2.180017 GGCAAAGACATGCTGCCG 59.820 61.111 11.56 0.00 45.72 5.69
1771 3293 1.305219 GGCAAAGACATGCTGCCGTA 61.305 55.000 11.56 0.00 45.72 4.02
1802 3324 2.906691 ATCCTCCATCTTGAGAAGCG 57.093 50.000 0.00 0.00 34.11 4.68
1808 3330 2.427453 TCCATCTTGAGAAGCGTAGACC 59.573 50.000 0.00 0.00 0.00 3.85
1809 3331 2.166459 CCATCTTGAGAAGCGTAGACCA 59.834 50.000 0.00 0.00 0.00 4.02
1810 3332 3.443037 CATCTTGAGAAGCGTAGACCAG 58.557 50.000 0.00 0.00 0.00 4.00
1811 3333 1.819288 TCTTGAGAAGCGTAGACCAGG 59.181 52.381 0.00 0.00 0.00 4.45
1812 3334 1.546476 CTTGAGAAGCGTAGACCAGGT 59.454 52.381 0.00 0.00 0.00 4.00
1813 3335 2.502142 TGAGAAGCGTAGACCAGGTA 57.498 50.000 0.00 0.00 0.00 3.08
1814 3336 3.014304 TGAGAAGCGTAGACCAGGTAT 57.986 47.619 0.00 0.00 0.00 2.73
1815 3337 2.688446 TGAGAAGCGTAGACCAGGTATG 59.312 50.000 0.00 0.00 0.00 2.39
1826 3348 3.465990 CAGGTATGGAGCCACAGTG 57.534 57.895 0.00 0.00 0.00 3.66
1827 3349 0.615331 CAGGTATGGAGCCACAGTGT 59.385 55.000 0.00 0.00 0.00 3.55
1828 3350 0.615331 AGGTATGGAGCCACAGTGTG 59.385 55.000 16.70 16.70 0.00 3.82
1829 3351 0.613260 GGTATGGAGCCACAGTGTGA 59.387 55.000 24.99 4.32 35.23 3.58
1830 3352 1.676014 GGTATGGAGCCACAGTGTGAC 60.676 57.143 24.99 13.70 35.23 3.67
1853 3375 4.500127 TGTGTACATGAGTTCATAACCCG 58.500 43.478 0.00 0.00 34.26 5.28
1873 3395 1.820519 GCATGGGTGAAGAAATGCTCA 59.179 47.619 0.00 0.00 41.71 4.26
1876 3398 4.622220 GCATGGGTGAAGAAATGCTCATTT 60.622 41.667 7.49 7.49 43.14 2.32
1905 3427 7.736447 AAATAGCACATCATTTCTAGGTAGC 57.264 36.000 0.00 0.00 0.00 3.58
1906 3428 4.078639 AGCACATCATTTCTAGGTAGCC 57.921 45.455 0.00 0.00 0.00 3.93
1907 3429 3.455910 AGCACATCATTTCTAGGTAGCCA 59.544 43.478 0.00 0.00 0.00 4.75
1908 3430 3.561725 GCACATCATTTCTAGGTAGCCAC 59.438 47.826 0.00 0.00 0.00 5.01
1909 3431 4.130118 CACATCATTTCTAGGTAGCCACC 58.870 47.826 0.00 0.00 46.19 4.61
1932 3454 2.411409 GCCACAATGCCAACAAAATACG 59.589 45.455 0.00 0.00 0.00 3.06
1946 3468 4.021544 ACAAAATACGGCCATGACAAACAT 60.022 37.500 2.24 0.00 40.17 2.71
1947 3469 4.370364 AAATACGGCCATGACAAACATC 57.630 40.909 2.24 0.00 37.07 3.06
1964 3486 7.161404 ACAAACATCAATAAGAGCACACTAGA 58.839 34.615 0.00 0.00 0.00 2.43
1970 3492 1.352083 AAGAGCACACTAGAGCCCAA 58.648 50.000 0.00 0.00 31.08 4.12
1971 3493 1.352083 AGAGCACACTAGAGCCCAAA 58.648 50.000 0.00 0.00 31.08 3.28
1999 3521 0.871592 TTCATCGCCGCTCATCTTCG 60.872 55.000 0.00 0.00 0.00 3.79
2009 3531 1.535860 GCTCATCTTCGTCTGAGAGGC 60.536 57.143 3.84 0.00 41.13 4.70
2010 3532 1.747924 CTCATCTTCGTCTGAGAGGCA 59.252 52.381 0.00 0.00 41.13 4.75
2013 3535 3.196469 TCATCTTCGTCTGAGAGGCAAAT 59.804 43.478 0.00 0.00 0.00 2.32
2034 3556 7.008901 GCAAATATTTTTGAGCCCGTTAAGTAC 59.991 37.037 12.18 0.00 44.11 2.73
2036 3558 3.775261 TTTTGAGCCCGTTAAGTACCT 57.225 42.857 0.00 0.00 0.00 3.08
2047 3569 3.370978 CGTTAAGTACCTCATGCAACCTG 59.629 47.826 0.00 0.00 0.00 4.00
2052 3574 0.469705 ACCTCATGCAACCTGCCAAA 60.470 50.000 0.00 0.00 44.23 3.28
2099 3722 4.615588 ACAAGATATTAGGAGCAGAGGC 57.384 45.455 0.00 0.00 41.61 4.70
2100 3723 3.969976 ACAAGATATTAGGAGCAGAGGCA 59.030 43.478 0.00 0.00 44.61 4.75
2104 3727 5.588845 AGATATTAGGAGCAGAGGCACTAT 58.411 41.667 0.00 0.00 41.55 2.12
2124 3747 1.305930 GGACCTCGGCAATGGTGTTC 61.306 60.000 0.00 0.00 36.59 3.18
2128 3751 1.227704 TCGGCAATGGTGTTCACGT 60.228 52.632 0.00 0.00 0.00 4.49
2165 3788 1.691434 GCCATTTGTCCTCCCAAAACA 59.309 47.619 0.00 0.00 37.81 2.83
2187 3918 3.517901 ACACTTCGGATCCATCCTTGTTA 59.482 43.478 13.41 0.00 44.93 2.41
2191 3922 5.648092 ACTTCGGATCCATCCTTGTTAAAAG 59.352 40.000 13.41 0.00 44.93 2.27
2194 3925 4.035675 CGGATCCATCCTTGTTAAAAGAGC 59.964 45.833 13.41 0.00 44.93 4.09
2203 3934 4.884164 CCTTGTTAAAAGAGCCATAGAGGG 59.116 45.833 0.00 0.00 38.09 4.30
2205 3936 3.202151 TGTTAAAAGAGCCATAGAGGGGG 59.798 47.826 0.00 0.00 38.09 5.40
2210 3941 0.106894 GAGCCATAGAGGGGGAAACG 59.893 60.000 0.00 0.00 38.09 3.60
2214 3945 2.674420 CCATAGAGGGGGAAACGACTA 58.326 52.381 0.00 0.00 0.00 2.59
2247 3978 1.202806 CCAGCCCAAAAGTGAGAGTCA 60.203 52.381 0.00 0.00 0.00 3.41
2262 3993 2.028020 AGAGTCACGAGGTTTCCATTCC 60.028 50.000 0.00 0.00 0.00 3.01
2265 3996 1.165270 CACGAGGTTTCCATTCCACC 58.835 55.000 0.00 0.00 0.00 4.61
2327 4058 7.643123 AGTAATTCCTACCAAATGTCATCCTT 58.357 34.615 0.00 0.00 0.00 3.36
2332 4063 5.710099 TCCTACCAAATGTCATCCTTTGTTC 59.290 40.000 0.00 0.00 31.83 3.18
2402 4133 4.219392 TCCATCATGGATTCCTAGTCCT 57.781 45.455 0.66 0.00 42.67 3.85
2403 4134 4.570926 TCCATCATGGATTCCTAGTCCTT 58.429 43.478 0.66 0.00 42.67 3.36
2405 4136 5.068636 CCATCATGGATTCCTAGTCCTTTG 58.931 45.833 0.00 0.00 40.96 2.77
2406 4137 5.163163 CCATCATGGATTCCTAGTCCTTTGA 60.163 44.000 0.00 3.87 40.96 2.69
2407 4138 6.466904 CCATCATGGATTCCTAGTCCTTTGAT 60.467 42.308 0.00 9.28 40.96 2.57
2410 4141 8.280258 TCATGGATTCCTAGTCCTTTGATATT 57.720 34.615 3.95 0.00 36.68 1.28
2412 4143 8.790718 CATGGATTCCTAGTCCTTTGATATTTG 58.209 37.037 3.95 0.00 36.68 2.32
2413 4144 8.101309 TGGATTCCTAGTCCTTTGATATTTGA 57.899 34.615 3.95 0.00 36.68 2.69
2443 4175 3.973425 AGAATACTTCATTTGGGCAGCT 58.027 40.909 0.00 0.00 0.00 4.24
2451 4183 5.893255 ACTTCATTTGGGCAGCTGATATTTA 59.107 36.000 20.43 0.00 0.00 1.40
2488 4220 6.819284 TCATTTTGGCAAAAGAATCTTGAGT 58.181 32.000 27.21 6.89 33.22 3.41
2497 4229 6.458751 GCAAAAGAATCTTGAGTGAACAGTCA 60.459 38.462 8.07 8.07 38.87 3.41
2514 4253 7.390440 TGAACAGTCAATCCATCGTAAAATTCT 59.610 33.333 0.00 0.00 0.00 2.40
2515 4254 8.786826 AACAGTCAATCCATCGTAAAATTCTA 57.213 30.769 0.00 0.00 0.00 2.10
2516 4255 8.197988 ACAGTCAATCCATCGTAAAATTCTAC 57.802 34.615 0.00 0.00 0.00 2.59
2518 4257 8.664798 CAGTCAATCCATCGTAAAATTCTACAA 58.335 33.333 0.00 0.00 0.00 2.41
2521 4260 9.443323 TCAATCCATCGTAAAATTCTACAAGAA 57.557 29.630 0.00 0.00 38.78 2.52
2593 4343 9.758651 ACAAAATTAATAAGAACAAGACAACCC 57.241 29.630 0.00 0.00 0.00 4.11
2596 4346 4.741928 AATAAGAACAAGACAACCCCCT 57.258 40.909 0.00 0.00 0.00 4.79
2599 4349 1.143073 AGAACAAGACAACCCCCTGTC 59.857 52.381 0.00 0.00 45.10 3.51
2608 4358 1.065126 CAACCCCCTGTCAAGAGGATC 60.065 57.143 0.00 0.00 34.69 3.36
2628 4378 6.042208 AGGATCTTACCCATGAACTACTAAGC 59.958 42.308 0.00 0.00 0.00 3.09
2639 4389 6.665992 TGAACTACTAAGCCTCTTCTGAAA 57.334 37.500 0.00 0.00 0.00 2.69
2662 4412 3.181439 CCTTTCTCCAACCTCTTCCAGTT 60.181 47.826 0.00 0.00 0.00 3.16
2674 4424 5.302823 ACCTCTTCCAGTTTGAATTCCAAAG 59.697 40.000 2.27 0.00 44.64 2.77
2680 4430 4.584325 CCAGTTTGAATTCCAAAGTCTCCA 59.416 41.667 2.27 0.00 44.32 3.86
2684 4434 7.548780 CAGTTTGAATTCCAAAGTCTCCAAAAA 59.451 33.333 2.27 0.00 44.32 1.94
2732 4482 0.593128 GTGGAGTTGTCACATGGCAC 59.407 55.000 0.00 0.00 35.39 5.01
2760 4510 5.333187 CGATCAACTCAGAATATTGCTCAGC 60.333 44.000 0.00 0.00 0.00 4.26
2772 4522 0.460811 TGCTCAGCGGCATCTACAAG 60.461 55.000 1.45 0.00 37.29 3.16
2773 4523 0.179100 GCTCAGCGGCATCTACAAGA 60.179 55.000 1.45 0.00 0.00 3.02
2774 4524 1.565305 CTCAGCGGCATCTACAAGAC 58.435 55.000 1.45 0.00 0.00 3.01
2775 4525 1.135915 CTCAGCGGCATCTACAAGACT 59.864 52.381 1.45 0.00 0.00 3.24
2776 4526 2.359214 CTCAGCGGCATCTACAAGACTA 59.641 50.000 1.45 0.00 0.00 2.59
2777 4527 2.099263 TCAGCGGCATCTACAAGACTAC 59.901 50.000 1.45 0.00 0.00 2.73
2778 4528 2.100197 AGCGGCATCTACAAGACTACA 58.900 47.619 1.45 0.00 0.00 2.74
2779 4529 2.496070 AGCGGCATCTACAAGACTACAA 59.504 45.455 1.45 0.00 0.00 2.41
2780 4530 2.603560 GCGGCATCTACAAGACTACAAC 59.396 50.000 0.00 0.00 0.00 3.32
2781 4531 3.676324 GCGGCATCTACAAGACTACAACT 60.676 47.826 0.00 0.00 0.00 3.16
2782 4532 4.495422 CGGCATCTACAAGACTACAACTT 58.505 43.478 0.00 0.00 0.00 2.66
2783 4533 4.563184 CGGCATCTACAAGACTACAACTTC 59.437 45.833 0.00 0.00 0.00 3.01
2784 4534 4.870991 GGCATCTACAAGACTACAACTTCC 59.129 45.833 0.00 0.00 0.00 3.46
2785 4535 4.870991 GCATCTACAAGACTACAACTTCCC 59.129 45.833 0.00 0.00 0.00 3.97
2786 4536 5.568825 GCATCTACAAGACTACAACTTCCCA 60.569 44.000 0.00 0.00 0.00 4.37
2787 4537 6.464222 CATCTACAAGACTACAACTTCCCAA 58.536 40.000 0.00 0.00 0.00 4.12
2788 4538 6.488769 TCTACAAGACTACAACTTCCCAAA 57.511 37.500 0.00 0.00 0.00 3.28
2789 4539 6.891388 TCTACAAGACTACAACTTCCCAAAA 58.109 36.000 0.00 0.00 0.00 2.44
2790 4540 6.990349 TCTACAAGACTACAACTTCCCAAAAG 59.010 38.462 0.00 0.00 0.00 2.27
2791 4541 5.751586 ACAAGACTACAACTTCCCAAAAGA 58.248 37.500 0.00 0.00 0.00 2.52
2792 4542 6.184789 ACAAGACTACAACTTCCCAAAAGAA 58.815 36.000 0.00 0.00 0.00 2.52
2793 4543 6.661805 ACAAGACTACAACTTCCCAAAAGAAA 59.338 34.615 0.00 0.00 0.00 2.52
2855 4605 2.384382 GTTCCACAAAATCACACAGCG 58.616 47.619 0.00 0.00 0.00 5.18
2890 4640 1.134848 AGAGCTTTCTCGAGGTCATGC 60.135 52.381 13.56 10.62 44.50 4.06
2892 4642 1.277557 AGCTTTCTCGAGGTCATGCTT 59.722 47.619 13.56 0.00 0.00 3.91
2905 4655 6.909357 CGAGGTCATGCTTCATAAAAAGAATC 59.091 38.462 0.00 0.00 0.00 2.52
2945 4695 1.107945 CACCATGCCATCAATCTGCA 58.892 50.000 0.00 0.00 39.68 4.41
2966 4716 3.781079 TGTCAACTTTGGCACTTTCAG 57.219 42.857 0.00 0.00 37.97 3.02
2992 4742 1.533625 TGACAAGCATGTAGGCAACC 58.466 50.000 0.00 0.00 40.74 3.77
3004 4754 4.701765 TGTAGGCAACCGTGTTAAAACTA 58.298 39.130 0.00 0.00 37.17 2.24
3042 4792 1.205460 TGGGCCCCTCTACCTCAAAC 61.205 60.000 22.27 0.00 0.00 2.93
3045 4795 0.992695 GCCCCTCTACCTCAAACCTT 59.007 55.000 0.00 0.00 0.00 3.50
3046 4796 2.193993 GCCCCTCTACCTCAAACCTTA 58.806 52.381 0.00 0.00 0.00 2.69
3059 4809 8.999905 ACCTCAAACCTTATTTTAGTTTGGTA 57.000 30.769 13.18 0.00 46.54 3.25
3090 4840 2.910199 ACATCATGGTTGACCTCGATG 58.090 47.619 20.91 20.91 44.11 3.84
3115 4866 5.803470 GCCACACTCCCTCTAATACAAAGTT 60.803 44.000 0.00 0.00 0.00 2.66
3130 4881 1.308998 AAGTTCTCAACCCAAGCACG 58.691 50.000 0.00 0.00 0.00 5.34
3135 4886 2.906897 CAACCCAAGCACGCCACT 60.907 61.111 0.00 0.00 0.00 4.00
3139 4890 2.192861 CCCAAGCACGCCACTTTGA 61.193 57.895 0.00 0.00 0.00 2.69
3252 5032 2.186243 AGTCTCATGACATGACAGCCT 58.814 47.619 14.24 5.07 45.20 4.58
3279 5059 2.487986 GGATGTCCCTCCCTTGCATAAG 60.488 54.545 0.00 0.00 0.00 1.73
3281 5061 1.992557 TGTCCCTCCCTTGCATAAGTT 59.007 47.619 0.00 0.00 31.80 2.66
3293 5073 5.623673 CCTTGCATAAGTTTCGTTTGTGTAC 59.376 40.000 0.00 0.00 31.80 2.90
3304 5096 1.489070 TTTGTGTACGCCGAACCACG 61.489 55.000 3.51 0.00 42.18 4.94
3322 5114 3.120786 CCACGCGATTAATCCGGTTATTC 60.121 47.826 15.93 5.20 0.00 1.75
3339 5131 7.751793 CCGGTTATTCGCAACTTTAGTAAAAAT 59.248 33.333 0.00 0.00 0.00 1.82
3340 5132 9.757859 CGGTTATTCGCAACTTTAGTAAAAATA 57.242 29.630 0.00 0.00 0.00 1.40
3404 5196 7.394077 TGTGTGATGAACTGATGACCAATAAAT 59.606 33.333 0.00 0.00 0.00 1.40
3501 5293 3.623960 TGTTAAGGTGTTGTTCAGAACGG 59.376 43.478 8.80 0.00 0.00 4.44
3505 5297 1.064952 GGTGTTGTTCAGAACGGTTGG 59.935 52.381 8.80 0.00 0.00 3.77
3548 5340 4.021544 TGAATTCCCAACATGCCAAAGTAC 60.022 41.667 2.27 0.00 0.00 2.73
3558 5350 4.023536 ACATGCCAAAGTACGTAAAACTGG 60.024 41.667 0.00 3.42 0.00 4.00
3572 5364 4.670896 AAAACTGGGAAAACTGATGTGG 57.329 40.909 0.00 0.00 0.00 4.17
3573 5365 3.312736 AACTGGGAAAACTGATGTGGT 57.687 42.857 0.00 0.00 0.00 4.16
3574 5366 3.312736 ACTGGGAAAACTGATGTGGTT 57.687 42.857 0.00 0.00 0.00 3.67
3575 5367 3.642141 ACTGGGAAAACTGATGTGGTTT 58.358 40.909 0.00 0.00 38.35 3.27
3576 5368 4.030216 ACTGGGAAAACTGATGTGGTTTT 58.970 39.130 4.56 4.56 45.66 2.43
3577 5369 4.141959 ACTGGGAAAACTGATGTGGTTTTG 60.142 41.667 8.89 0.00 43.88 2.44
3578 5370 4.026744 TGGGAAAACTGATGTGGTTTTGA 58.973 39.130 8.89 0.00 43.88 2.69
3579 5371 4.653341 TGGGAAAACTGATGTGGTTTTGAT 59.347 37.500 8.89 0.00 43.88 2.57
3580 5372 5.130145 TGGGAAAACTGATGTGGTTTTGATT 59.870 36.000 8.89 0.00 43.88 2.57
3631 5423 3.825014 GCATGAATGGGATACTTGCAGAT 59.175 43.478 0.00 0.00 35.68 2.90
3657 5449 6.675026 TCAGGTTACACGCATACTATCATAC 58.325 40.000 0.00 0.00 0.00 2.39
3659 5451 4.855388 GGTTACACGCATACTATCATACCG 59.145 45.833 0.00 0.00 0.00 4.02
3660 5452 2.942710 ACACGCATACTATCATACCGC 58.057 47.619 0.00 0.00 0.00 5.68
3677 5469 1.626654 CGCTAGGGTGACAAACTGCG 61.627 60.000 0.00 0.00 36.41 5.18
3710 5502 3.848975 AGGATCCTCTCAGGTCATTTGTT 59.151 43.478 9.02 0.00 36.53 2.83
3755 5547 1.760875 GTGGATCACCGAGGCCCTA 60.761 63.158 0.00 0.00 39.42 3.53
3766 5558 2.438392 CCGAGGCCCTAGAAAAACCTAT 59.562 50.000 0.00 0.00 0.00 2.57
3767 5559 3.644738 CCGAGGCCCTAGAAAAACCTATA 59.355 47.826 0.00 0.00 0.00 1.31
3806 5598 6.521162 TCGAGCTTCATGCCATTACTTATTA 58.479 36.000 0.00 0.00 44.23 0.98
3807 5599 7.161404 TCGAGCTTCATGCCATTACTTATTAT 58.839 34.615 0.00 0.00 44.23 1.28
3808 5600 8.311109 TCGAGCTTCATGCCATTACTTATTATA 58.689 33.333 0.00 0.00 44.23 0.98
3809 5601 9.102757 CGAGCTTCATGCCATTACTTATTATAT 57.897 33.333 0.00 0.00 44.23 0.86
3840 5632 9.161629 CTCATATATGTTCACCACAAACAACTA 57.838 33.333 12.42 0.00 39.84 2.24
3860 5652 8.128582 ACAACTATCGGTTTAATTATGCATGTG 58.871 33.333 10.16 0.00 35.74 3.21
3917 5709 6.016360 TGGAATCACACACTCCATAAAACTTG 60.016 38.462 0.00 0.00 34.26 3.16
4122 5914 1.370051 CGTGTCGACTCGCAGTTCA 60.370 57.895 24.70 0.00 0.00 3.18
4127 5919 1.400846 GTCGACTCGCAGTTCATCCTA 59.599 52.381 8.70 0.00 0.00 2.94
4178 5970 0.112606 TTGAGTCGTGGGACCTCTCT 59.887 55.000 0.00 0.00 44.54 3.10
4265 6057 1.519455 CAAGGACACGATCGAGGCC 60.519 63.158 27.90 27.90 33.87 5.19
4295 6087 3.423154 GCGTCCCGGCTGAACAAG 61.423 66.667 0.00 0.00 0.00 3.16
4305 6097 3.491964 CCGGCTGAACAAGGACGATAATA 60.492 47.826 0.00 0.00 35.81 0.98
4307 6099 4.750098 CGGCTGAACAAGGACGATAATATT 59.250 41.667 0.00 0.00 35.81 1.28
4348 6140 0.307146 GGAGATCCGACGAAGGTACG 59.693 60.000 0.00 0.00 39.31 3.67
4350 6142 1.261089 GAGATCCGACGAAGGTACGAG 59.739 57.143 0.00 0.00 37.03 4.18
4351 6143 1.012841 GATCCGACGAAGGTACGAGT 58.987 55.000 0.00 0.00 37.03 4.18
4352 6144 2.159043 AGATCCGACGAAGGTACGAGTA 60.159 50.000 0.00 0.00 37.03 2.59
4353 6145 1.359848 TCCGACGAAGGTACGAGTAC 58.640 55.000 4.90 4.90 37.03 2.73
4355 6147 1.667724 CCGACGAAGGTACGAGTACAT 59.332 52.381 14.40 5.29 37.78 2.29
4356 6148 2.866156 CCGACGAAGGTACGAGTACATA 59.134 50.000 14.40 0.00 37.78 2.29
4357 6149 3.302740 CCGACGAAGGTACGAGTACATAC 60.303 52.174 14.40 4.84 37.78 2.39
4358 6150 3.306973 CGACGAAGGTACGAGTACATACA 59.693 47.826 14.40 0.00 37.78 2.29
4359 6151 4.025396 CGACGAAGGTACGAGTACATACAT 60.025 45.833 14.40 0.00 37.78 2.29
4360 6152 5.165911 ACGAAGGTACGAGTACATACATG 57.834 43.478 14.40 0.00 37.78 3.21
4361 6153 4.877823 ACGAAGGTACGAGTACATACATGA 59.122 41.667 14.40 0.00 37.78 3.07
4362 6154 5.530171 ACGAAGGTACGAGTACATACATGAT 59.470 40.000 14.40 0.00 37.78 2.45
4370 6162 9.901724 GTACGAGTACATACATGATTTCTTTTG 57.098 33.333 0.00 0.00 36.15 2.44
4373 6165 7.904977 CGAGTACATACATGATTTCTTTTGTGG 59.095 37.037 0.00 0.00 0.00 4.17
4374 6166 8.862325 AGTACATACATGATTTCTTTTGTGGA 57.138 30.769 0.00 0.00 0.00 4.02
4379 6171 4.586001 ACATGATTTCTTTTGTGGACTGCT 59.414 37.500 0.00 0.00 0.00 4.24
4382 6174 4.402155 TGATTTCTTTTGTGGACTGCTTGT 59.598 37.500 0.00 0.00 0.00 3.16
4383 6175 3.781079 TTCTTTTGTGGACTGCTTGTG 57.219 42.857 0.00 0.00 0.00 3.33
4384 6176 2.722094 TCTTTTGTGGACTGCTTGTGT 58.278 42.857 0.00 0.00 0.00 3.72
4385 6177 3.088532 TCTTTTGTGGACTGCTTGTGTT 58.911 40.909 0.00 0.00 0.00 3.32
4386 6178 2.937469 TTTGTGGACTGCTTGTGTTG 57.063 45.000 0.00 0.00 0.00 3.33
4387 6179 1.102154 TTGTGGACTGCTTGTGTTGG 58.898 50.000 0.00 0.00 0.00 3.77
4389 6181 1.102978 GTGGACTGCTTGTGTTGGTT 58.897 50.000 0.00 0.00 0.00 3.67
4390 6182 1.102154 TGGACTGCTTGTGTTGGTTG 58.898 50.000 0.00 0.00 0.00 3.77
4391 6183 1.340502 TGGACTGCTTGTGTTGGTTGA 60.341 47.619 0.00 0.00 0.00 3.18
4392 6184 1.956477 GGACTGCTTGTGTTGGTTGAT 59.044 47.619 0.00 0.00 0.00 2.57
4393 6185 2.030805 GGACTGCTTGTGTTGGTTGATC 60.031 50.000 0.00 0.00 0.00 2.92
4403 6202 4.111916 GTGTTGGTTGATCAGTTTGGTTG 58.888 43.478 0.00 0.00 0.00 3.77
4417 6216 1.340088 TGGTTGTGCCAATTGCTGAT 58.660 45.000 0.00 0.00 45.94 2.90
4420 6219 1.273048 GTTGTGCCAATTGCTGATGGA 59.727 47.619 0.00 0.00 42.00 3.41
4421 6220 1.179152 TGTGCCAATTGCTGATGGAG 58.821 50.000 0.00 0.00 42.00 3.86
4422 6221 1.180029 GTGCCAATTGCTGATGGAGT 58.820 50.000 0.00 0.00 42.00 3.85
4423 6222 1.133790 GTGCCAATTGCTGATGGAGTC 59.866 52.381 0.00 0.00 42.00 3.36
4425 6224 2.097825 GCCAATTGCTGATGGAGTCTT 58.902 47.619 0.00 0.00 39.12 3.01
4428 6236 3.119602 CCAATTGCTGATGGAGTCTTGTG 60.120 47.826 0.00 0.00 39.12 3.33
4453 6261 0.685097 TGCAGTTCTTTACGAGGCCT 59.315 50.000 3.86 3.86 0.00 5.19
4552 6360 4.642437 ACGACTCTGTGATGATGACTGTAT 59.358 41.667 0.00 0.00 0.00 2.29
4563 6371 5.434352 TGATGACTGTATTAGCTACGACC 57.566 43.478 0.00 0.00 32.61 4.79
4567 6375 3.808728 ACTGTATTAGCTACGACCCGTA 58.191 45.455 0.00 0.00 41.54 4.02
4568 6376 4.392940 ACTGTATTAGCTACGACCCGTAT 58.607 43.478 0.00 0.00 41.53 3.06
4574 6382 1.948145 AGCTACGACCCGTATCTGAAG 59.052 52.381 2.65 0.00 41.53 3.02
4575 6383 1.945394 GCTACGACCCGTATCTGAAGA 59.055 52.381 0.00 0.00 41.53 2.87
4576 6384 2.357009 GCTACGACCCGTATCTGAAGAA 59.643 50.000 0.00 0.00 41.53 2.52
4577 6385 2.935481 ACGACCCGTATCTGAAGAAC 57.065 50.000 0.00 0.00 38.73 3.01
4578 6386 2.165167 ACGACCCGTATCTGAAGAACA 58.835 47.619 0.00 0.00 38.73 3.18
4579 6387 2.094854 ACGACCCGTATCTGAAGAACAC 60.095 50.000 0.00 0.00 38.73 3.32
4580 6388 2.163815 CGACCCGTATCTGAAGAACACT 59.836 50.000 0.00 0.00 0.00 3.55
4581 6389 3.367087 CGACCCGTATCTGAAGAACACTT 60.367 47.826 0.00 0.00 0.00 3.16
4582 6390 3.926616 ACCCGTATCTGAAGAACACTTG 58.073 45.455 0.00 0.00 0.00 3.16
4583 6391 3.262420 CCCGTATCTGAAGAACACTTGG 58.738 50.000 0.00 0.00 0.00 3.61
4584 6392 3.056107 CCCGTATCTGAAGAACACTTGGA 60.056 47.826 0.00 0.00 0.00 3.53
4585 6393 4.562757 CCCGTATCTGAAGAACACTTGGAA 60.563 45.833 0.00 0.00 0.00 3.53
4586 6394 5.178797 CCGTATCTGAAGAACACTTGGAAT 58.821 41.667 0.00 0.00 0.00 3.01
4587 6395 5.063944 CCGTATCTGAAGAACACTTGGAATG 59.936 44.000 0.00 0.00 0.00 2.67
4588 6396 5.639506 CGTATCTGAAGAACACTTGGAATGT 59.360 40.000 0.00 0.00 0.00 2.71
4589 6397 6.183360 CGTATCTGAAGAACACTTGGAATGTC 60.183 42.308 0.00 0.00 0.00 3.06
4590 6398 5.034852 TCTGAAGAACACTTGGAATGTCA 57.965 39.130 0.00 0.00 0.00 3.58
4591 6399 5.624159 TCTGAAGAACACTTGGAATGTCAT 58.376 37.500 0.00 0.00 0.00 3.06
4592 6400 5.471116 TCTGAAGAACACTTGGAATGTCATG 59.529 40.000 0.00 0.00 0.00 3.07
4593 6401 4.520111 TGAAGAACACTTGGAATGTCATGG 59.480 41.667 0.00 0.00 0.00 3.66
4594 6402 4.104383 AGAACACTTGGAATGTCATGGT 57.896 40.909 0.00 0.00 0.00 3.55
4595 6403 3.822735 AGAACACTTGGAATGTCATGGTG 59.177 43.478 0.00 0.00 0.00 4.17
4596 6404 3.507162 ACACTTGGAATGTCATGGTGA 57.493 42.857 0.00 0.00 0.00 4.02
4597 6405 3.831323 ACACTTGGAATGTCATGGTGAA 58.169 40.909 0.00 0.00 0.00 3.18
4598 6406 3.569701 ACACTTGGAATGTCATGGTGAAC 59.430 43.478 0.00 0.00 0.00 3.18
4599 6407 3.822735 CACTTGGAATGTCATGGTGAACT 59.177 43.478 0.00 0.00 0.00 3.01
4600 6408 4.074970 ACTTGGAATGTCATGGTGAACTC 58.925 43.478 0.00 0.00 0.00 3.01
4601 6409 2.698803 TGGAATGTCATGGTGAACTCG 58.301 47.619 0.00 0.00 0.00 4.18
4602 6410 2.301583 TGGAATGTCATGGTGAACTCGA 59.698 45.455 0.00 0.00 0.00 4.04
4608 6416 2.166459 GTCATGGTGAACTCGATCTCCA 59.834 50.000 11.18 11.18 44.50 3.86
4613 6421 3.118992 TGGTGAACTCGATCTCCAGAATG 60.119 47.826 5.85 0.00 37.89 2.67
4636 6444 7.663043 TGAGGTTGTGTGTATATACATACCA 57.337 36.000 29.16 20.79 44.51 3.25
4669 6478 6.749139 TGTCTAACATACTCATATCACAGGC 58.251 40.000 0.00 0.00 0.00 4.85
4670 6479 6.323739 TGTCTAACATACTCATATCACAGGCA 59.676 38.462 0.00 0.00 0.00 4.75
4671 6480 7.015584 TGTCTAACATACTCATATCACAGGCAT 59.984 37.037 0.00 0.00 0.00 4.40
4672 6481 7.875041 GTCTAACATACTCATATCACAGGCATT 59.125 37.037 0.00 0.00 0.00 3.56
4711 6521 6.203723 GCATGAGTTTTGAGACTAGTCACTTT 59.796 38.462 24.44 3.71 0.00 2.66
4722 6532 5.186021 AGACTAGTCACTTTATGGTCAGTGG 59.814 44.000 24.44 0.00 40.81 4.00
4725 6535 3.074412 GTCACTTTATGGTCAGTGGGTG 58.926 50.000 0.00 0.00 40.81 4.61
4726 6536 1.812571 CACTTTATGGTCAGTGGGTGC 59.187 52.381 0.00 0.00 37.37 5.01
4727 6537 1.423541 ACTTTATGGTCAGTGGGTGCA 59.576 47.619 0.00 0.00 0.00 4.57
4728 6538 1.812571 CTTTATGGTCAGTGGGTGCAC 59.187 52.381 8.80 8.80 0.00 4.57
4729 6539 0.321210 TTATGGTCAGTGGGTGCACG 60.321 55.000 11.45 0.00 0.00 5.34
4730 6540 1.476845 TATGGTCAGTGGGTGCACGT 61.477 55.000 11.45 0.00 0.00 4.49
4731 6541 2.972505 GGTCAGTGGGTGCACGTG 60.973 66.667 12.28 12.28 0.00 4.49
4732 6542 2.203015 GTCAGTGGGTGCACGTGT 60.203 61.111 18.38 0.00 0.00 4.49
4733 6543 1.068417 GTCAGTGGGTGCACGTGTA 59.932 57.895 18.38 10.46 0.00 2.90
4734 6544 0.320421 GTCAGTGGGTGCACGTGTAT 60.320 55.000 18.38 0.00 0.00 2.29
4735 6545 1.067425 GTCAGTGGGTGCACGTGTATA 60.067 52.381 18.38 1.01 0.00 1.47
4736 6546 1.828595 TCAGTGGGTGCACGTGTATAT 59.171 47.619 18.38 0.00 0.00 0.86
4737 6547 1.933181 CAGTGGGTGCACGTGTATATG 59.067 52.381 18.38 4.95 0.00 1.78
4738 6548 1.553248 AGTGGGTGCACGTGTATATGT 59.447 47.619 18.38 0.00 0.00 2.29
4751 6561 4.389992 CGTGTATATGTCTGGCATTGATCC 59.610 45.833 0.00 0.00 38.94 3.36
4761 6571 1.134946 GGCATTGATCCCTTGGTTTCG 59.865 52.381 0.00 0.00 0.00 3.46
4764 6574 1.803334 TTGATCCCTTGGTTTCGTCG 58.197 50.000 0.00 0.00 0.00 5.12
4766 6576 0.391263 GATCCCTTGGTTTCGTCGCT 60.391 55.000 0.00 0.00 0.00 4.93
4767 6577 0.391263 ATCCCTTGGTTTCGTCGCTC 60.391 55.000 0.00 0.00 0.00 5.03
4771 6581 1.930816 CTTGGTTTCGTCGCTCGTCG 61.931 60.000 2.80 2.80 40.80 5.12
4774 6584 4.034258 TTTCGTCGCTCGTCGGCT 62.034 61.111 8.76 0.00 41.41 5.52
4779 6589 2.435410 TCGCTCGTCGGCTGTAGA 60.435 61.111 0.00 0.00 39.05 2.59
4803 6613 0.108472 CGAGCAGCAGTTGATCAGGA 60.108 55.000 3.27 0.00 42.35 3.86
4839 6649 0.038166 TGATTTCAGTGGCCAGGGTC 59.962 55.000 5.11 0.00 0.00 4.46
4861 6673 0.237498 GCACCGGAGCAAACACTTAC 59.763 55.000 19.70 0.00 0.00 2.34
4866 6678 1.531149 CGGAGCAAACACTTACCACTG 59.469 52.381 0.00 0.00 0.00 3.66
4880 6692 2.195389 CACTGGATGGTGGCAATGG 58.805 57.895 0.00 0.00 33.95 3.16
4881 6693 1.683365 ACTGGATGGTGGCAATGGC 60.683 57.895 0.00 0.00 40.13 4.40
4882 6694 1.683025 CTGGATGGTGGCAATGGCA 60.683 57.895 5.05 5.05 43.71 4.92
4883 6695 1.229114 TGGATGGTGGCAATGGCAA 60.229 52.632 12.09 0.00 43.71 4.52
4884 6696 1.218854 GGATGGTGGCAATGGCAAC 59.781 57.895 18.48 18.48 46.35 4.17
4974 6822 4.151157 GCGATGGTTACGTGTTTTTCTACT 59.849 41.667 0.00 0.00 0.00 2.57
4976 6824 6.294363 CGATGGTTACGTGTTTTTCTACTTC 58.706 40.000 0.00 0.00 0.00 3.01
5041 6889 2.536761 CGGTAAAATATCTCCGGCCA 57.463 50.000 2.24 0.00 39.41 5.36
5107 6955 4.400567 ACTTTGCCATCCAAGCTAGATTTC 59.599 41.667 0.00 0.00 34.34 2.17
5119 6967 2.475187 GCTAGATTTCGTGCAAGCTGTG 60.475 50.000 0.00 0.00 0.00 3.66
5147 6995 3.254629 TGGCAAGACAGGCAGAATC 57.745 52.632 0.00 0.00 39.34 2.52
5160 7008 1.671054 AGAATCCGCACAACGTGGG 60.671 57.895 0.00 4.34 46.14 4.61
5205 7053 6.370442 GCGATCTATACTTCTGCTAGAGAGAA 59.630 42.308 0.00 0.00 30.18 2.87
5226 7074 0.036010 AGCCAGTGGTTTCATCTCGG 60.036 55.000 11.74 0.00 0.00 4.63
5229 7077 1.363744 CAGTGGTTTCATCTCGGCTC 58.636 55.000 0.00 0.00 0.00 4.70
5230 7078 1.066573 CAGTGGTTTCATCTCGGCTCT 60.067 52.381 0.00 0.00 0.00 4.09
5271 7119 3.674997 TGGAGATGCTGGTTACTTTGTC 58.325 45.455 0.00 0.00 0.00 3.18
5281 7129 3.456644 TGGTTACTTTGTCCACTGGAGAA 59.543 43.478 3.48 3.48 33.04 2.87
5284 7132 3.864789 ACTTTGTCCACTGGAGAATGT 57.135 42.857 16.65 16.65 38.10 2.71
5312 7160 1.331756 CCCTGAATTACGCTGCATCAC 59.668 52.381 0.00 0.00 0.00 3.06
5318 7166 0.442310 TTACGCTGCATCACGAAAGC 59.558 50.000 10.43 0.00 0.00 3.51
5321 7169 1.510623 GCTGCATCACGAAAGCACG 60.511 57.895 0.00 0.00 35.69 5.34
5368 7216 7.509141 TCATGAAAGTAATTGAAGCAGAACA 57.491 32.000 0.00 0.00 0.00 3.18
5377 7228 8.887717 AGTAATTGAAGCAGAACATAGATGAAC 58.112 33.333 0.00 0.00 0.00 3.18
5384 7235 6.000219 AGCAGAACATAGATGAACACAAAGT 59.000 36.000 0.00 0.00 0.00 2.66
5390 7241 3.678056 AGATGAACACAAAGTAGGCGA 57.322 42.857 0.00 0.00 0.00 5.54
5391 7242 3.589988 AGATGAACACAAAGTAGGCGAG 58.410 45.455 0.00 0.00 0.00 5.03
5463 7314 6.759272 TGCTGATTCCATGTACTCCTAATAC 58.241 40.000 0.00 0.00 0.00 1.89
5500 7351 3.440522 CAGGAGTCATCAACTAGTCACGA 59.559 47.826 0.00 0.00 38.74 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 5.183713 ACCACACAGACATGGTCAAATATTG 59.816 40.000 0.00 0.00 46.62 1.90
44 45 5.324409 ACCACACAGACATGGTCAAATATT 58.676 37.500 0.00 0.00 46.62 1.28
45 46 4.922206 ACCACACAGACATGGTCAAATAT 58.078 39.130 0.00 0.00 46.62 1.28
53 54 1.679139 ACACAACCACACAGACATGG 58.321 50.000 0.00 0.00 42.13 3.66
78 79 1.358046 GCAATGCGAGAAGATGGGC 59.642 57.895 0.00 0.00 0.00 5.36
79 80 1.450531 GGGCAATGCGAGAAGATGGG 61.451 60.000 0.00 0.00 0.00 4.00
97 98 1.745087 CAACCATTCTGACCATTCCGG 59.255 52.381 0.00 0.00 42.50 5.14
165 169 4.204012 TCTTACACTTTGTTTGACCCCTG 58.796 43.478 0.00 0.00 0.00 4.45
174 178 7.575720 GCAGGAATAAGCATCTTACACTTTGTT 60.576 37.037 0.00 0.00 0.00 2.83
226 230 7.145985 ACACACACACTATTATAGCGATAAGG 58.854 38.462 5.49 3.78 31.02 2.69
321 325 2.057137 TATTCATTGCCTGGCCTGAC 57.943 50.000 17.53 0.00 0.00 3.51
326 330 5.927281 ATATTCCATATTCATTGCCTGGC 57.073 39.130 12.87 12.87 0.00 4.85
337 342 8.069356 ACCCCATATGCATGAATATTCCATATT 58.931 33.333 10.16 6.31 38.12 1.28
345 350 4.686944 CGCCTACCCCATATGCATGAATAT 60.687 45.833 10.16 0.00 33.67 1.28
348 353 1.271325 CGCCTACCCCATATGCATGAA 60.271 52.381 10.16 0.00 33.67 2.57
404 413 6.238759 CGAAATTGGGAATGAGAATTACCTCC 60.239 42.308 1.55 0.00 35.51 4.30
424 433 4.137543 GGCATTAGGGATTGAGTCGAAAT 58.862 43.478 0.00 0.00 0.00 2.17
437 446 4.227864 AGTCTCTGAAAAGGCATTAGGG 57.772 45.455 0.00 0.00 0.00 3.53
443 452 2.645838 AGCAAGTCTCTGAAAAGGCA 57.354 45.000 0.00 0.00 0.00 4.75
453 462 6.549952 CAGAACATGGAAATAAGCAAGTCTC 58.450 40.000 0.00 0.00 0.00 3.36
478 487 7.496704 CAATAAACAATTGATTCTGGTCACG 57.503 36.000 13.59 0.00 46.81 4.35
524 533 4.702131 GCCCCAATAATAGCTATGGTGAAG 59.298 45.833 7.09 2.62 0.00 3.02
541 553 6.319715 TGTCATGTATATCTACTAGCCCCAA 58.680 40.000 0.00 0.00 0.00 4.12
543 555 6.852420 TTGTCATGTATATCTACTAGCCCC 57.148 41.667 0.00 0.00 0.00 5.80
593 605 9.979578 TTCTTTTGTACACTATGCAATTCATTT 57.020 25.926 0.00 0.00 36.63 2.32
639 654 9.658799 TGAACCATAAACATGAAACAAAAAGAA 57.341 25.926 0.00 0.00 0.00 2.52
714 729 6.872020 TCTCAAAGTTGTAGAAATCCCTAACG 59.128 38.462 0.00 0.00 0.00 3.18
726 741 7.965107 GGCACATAAAAGATCTCAAAGTTGTAG 59.035 37.037 0.00 0.00 0.00 2.74
733 748 7.523293 TTTGAGGCACATAAAAGATCTCAAA 57.477 32.000 10.35 10.35 43.18 2.69
738 753 6.866480 TCCATTTTGAGGCACATAAAAGATC 58.134 36.000 0.00 0.00 31.28 2.75
740 755 6.662865 TTCCATTTTGAGGCACATAAAAGA 57.337 33.333 0.00 0.00 31.28 2.52
751 766 4.873827 CCATGCTTTCATTCCATTTTGAGG 59.126 41.667 0.00 0.00 0.00 3.86
838 854 9.002080 CGTTTTTGAAGTACGTATTGTTTTTCT 57.998 29.630 0.00 0.00 0.00 2.52
851 2353 5.441709 TTCCATTCCCGTTTTTGAAGTAC 57.558 39.130 0.00 0.00 0.00 2.73
866 2371 3.146847 CCCTACGGCCTAATTTCCATTC 58.853 50.000 0.00 0.00 0.00 2.67
907 2412 4.144703 GGCCTCTCGTTCCGTCCC 62.145 72.222 0.00 0.00 0.00 4.46
954 2459 2.668550 GGGACGTCAAGGTGTGGC 60.669 66.667 18.91 0.00 0.00 5.01
1176 2691 5.431420 TGATCGAGAATAAGCAGAGAGAC 57.569 43.478 0.00 0.00 0.00 3.36
1190 2705 0.030773 GCCGTGCAGTATGATCGAGA 59.969 55.000 0.00 0.00 39.69 4.04
1203 2718 1.151777 AGCATACGTATGTGCCGTGC 61.152 55.000 30.63 19.36 43.65 5.34
1204 2719 0.852777 GAGCATACGTATGTGCCGTG 59.147 55.000 30.63 10.99 43.65 4.94
1205 2720 0.249322 GGAGCATACGTATGTGCCGT 60.249 55.000 30.63 14.45 43.65 5.68
1206 2721 0.032130 AGGAGCATACGTATGTGCCG 59.968 55.000 30.63 10.83 43.65 5.69
1207 2722 1.605712 GGAGGAGCATACGTATGTGCC 60.606 57.143 30.63 28.77 43.65 5.01
1212 2727 2.982339 AGAGGGAGGAGCATACGTAT 57.018 50.000 1.14 1.14 0.00 3.06
1227 2742 1.202580 CCGGTTATCCAGCAGAAGAGG 60.203 57.143 0.00 0.00 0.00 3.69
1228 2743 1.757118 TCCGGTTATCCAGCAGAAGAG 59.243 52.381 0.00 0.00 0.00 2.85
1234 2749 2.897207 CCGTCCGGTTATCCAGCA 59.103 61.111 0.00 0.00 0.00 4.41
1259 2774 4.624364 TCCACCACTGCACAGGCG 62.624 66.667 2.21 0.00 45.35 5.52
1260 2775 2.980233 GTCCACCACTGCACAGGC 60.980 66.667 2.21 0.00 41.68 4.85
1261 2776 2.666190 CGTCCACCACTGCACAGG 60.666 66.667 2.21 0.00 0.00 4.00
1262 2777 1.956170 GTCGTCCACCACTGCACAG 60.956 63.158 0.00 0.00 0.00 3.66
1469 2989 1.004918 AGGCAGACGCACCTTGTAC 60.005 57.895 0.00 0.00 41.24 2.90
1490 3010 4.120755 GCTGGGAGCTGAAGGGGG 62.121 72.222 0.00 0.00 38.45 5.40
1511 3033 7.653311 TGGTCATCATACAAGTTGAATCGATAG 59.347 37.037 10.54 2.47 0.00 2.08
1512 3034 7.496747 TGGTCATCATACAAGTTGAATCGATA 58.503 34.615 10.54 0.00 0.00 2.92
1513 3035 6.348498 TGGTCATCATACAAGTTGAATCGAT 58.652 36.000 10.54 0.00 0.00 3.59
1610 3132 2.512485 TGTTTCGGTCGTGTGTATGT 57.488 45.000 0.00 0.00 0.00 2.29
1611 3133 2.798283 ACTTGTTTCGGTCGTGTGTATG 59.202 45.455 0.00 0.00 0.00 2.39
1612 3134 2.798283 CACTTGTTTCGGTCGTGTGTAT 59.202 45.455 0.00 0.00 0.00 2.29
1613 3135 2.195096 CACTTGTTTCGGTCGTGTGTA 58.805 47.619 0.00 0.00 0.00 2.90
1614 3136 1.003851 CACTTGTTTCGGTCGTGTGT 58.996 50.000 0.00 0.00 0.00 3.72
1620 3142 1.235724 CTTCCCCACTTGTTTCGGTC 58.764 55.000 0.00 0.00 0.00 4.79
1652 3174 9.995003 TTTCATTACTTTTGCTTACATTCCATT 57.005 25.926 0.00 0.00 0.00 3.16
1654 3176 9.823647 TTTTTCATTACTTTTGCTTACATTCCA 57.176 25.926 0.00 0.00 0.00 3.53
1663 3185 9.382275 ACTTCATTGTTTTTCATTACTTTTGCT 57.618 25.926 0.00 0.00 0.00 3.91
1664 3186 9.424659 CACTTCATTGTTTTTCATTACTTTTGC 57.575 29.630 0.00 0.00 0.00 3.68
1665 3187 9.424659 GCACTTCATTGTTTTTCATTACTTTTG 57.575 29.630 0.00 0.00 0.00 2.44
1666 3188 8.611757 GGCACTTCATTGTTTTTCATTACTTTT 58.388 29.630 0.00 0.00 0.00 2.27
1667 3189 7.986889 AGGCACTTCATTGTTTTTCATTACTTT 59.013 29.630 0.00 0.00 27.25 2.66
1668 3190 7.500141 AGGCACTTCATTGTTTTTCATTACTT 58.500 30.769 0.00 0.00 27.25 2.24
1669 3191 7.054491 AGGCACTTCATTGTTTTTCATTACT 57.946 32.000 0.00 0.00 27.25 2.24
1670 3192 8.986477 ATAGGCACTTCATTGTTTTTCATTAC 57.014 30.769 0.00 0.00 41.75 1.89
1671 3193 8.250332 GGATAGGCACTTCATTGTTTTTCATTA 58.750 33.333 0.00 0.00 41.75 1.90
1672 3194 7.099120 GGATAGGCACTTCATTGTTTTTCATT 58.901 34.615 0.00 0.00 41.75 2.57
1673 3195 6.625740 CGGATAGGCACTTCATTGTTTTTCAT 60.626 38.462 0.00 0.00 41.75 2.57
1674 3196 5.335583 CGGATAGGCACTTCATTGTTTTTCA 60.336 40.000 0.00 0.00 41.75 2.69
1697 3219 3.710326 TGAATGTCGATTCCCTCTACG 57.290 47.619 0.00 0.00 37.74 3.51
1711 3233 3.834231 AGCTTTTTACCCAGCATGAATGT 59.166 39.130 0.00 0.00 39.69 2.71
1716 3238 2.821969 AGTGAGCTTTTTACCCAGCATG 59.178 45.455 0.00 0.00 38.61 4.06
1717 3239 2.821969 CAGTGAGCTTTTTACCCAGCAT 59.178 45.455 0.00 0.00 38.61 3.79
1718 3240 2.158682 TCAGTGAGCTTTTTACCCAGCA 60.159 45.455 0.00 0.00 38.61 4.41
1719 3241 2.226674 GTCAGTGAGCTTTTTACCCAGC 59.773 50.000 0.00 0.00 36.16 4.85
1720 3242 3.744660 AGTCAGTGAGCTTTTTACCCAG 58.255 45.455 0.00 0.00 0.00 4.45
1721 3243 3.857157 AGTCAGTGAGCTTTTTACCCA 57.143 42.857 0.00 0.00 0.00 4.51
1722 3244 4.895961 AGTAGTCAGTGAGCTTTTTACCC 58.104 43.478 0.00 0.00 0.00 3.69
1769 3291 5.483583 AGATGGAGGATTAAGAGATGGCTAC 59.516 44.000 0.00 0.00 0.00 3.58
1771 3293 4.501433 AGATGGAGGATTAAGAGATGGCT 58.499 43.478 0.00 0.00 0.00 4.75
1777 3299 5.990996 GCTTCTCAAGATGGAGGATTAAGAG 59.009 44.000 0.00 0.00 35.58 2.85
1802 3324 1.413077 GTGGCTCCATACCTGGTCTAC 59.587 57.143 0.63 0.00 43.61 2.59
1808 3330 0.615331 ACACTGTGGCTCCATACCTG 59.385 55.000 13.09 0.00 0.00 4.00
1809 3331 0.615331 CACACTGTGGCTCCATACCT 59.385 55.000 13.09 0.00 0.00 3.08
1810 3332 0.613260 TCACACTGTGGCTCCATACC 59.387 55.000 13.09 0.00 33.87 2.73
1811 3333 1.276421 AGTCACACTGTGGCTCCATAC 59.724 52.381 10.65 0.00 46.09 2.39
1812 3334 1.276138 CAGTCACACTGTGGCTCCATA 59.724 52.381 13.55 0.00 46.09 2.74
1813 3335 0.035881 CAGTCACACTGTGGCTCCAT 59.964 55.000 13.55 0.00 46.09 3.41
1814 3336 1.447217 CAGTCACACTGTGGCTCCA 59.553 57.895 13.55 0.00 46.09 3.86
1815 3337 4.368391 CAGTCACACTGTGGCTCC 57.632 61.111 13.55 0.00 46.09 4.70
1821 3343 9.513780 ATGAACTCATGTACACAGTCACACTGT 62.514 40.741 9.26 3.37 46.63 3.55
1822 3344 7.232272 ATGAACTCATGTACACAGTCACACTG 61.232 42.308 9.26 1.99 42.50 3.66
1823 3345 4.099419 TGAACTCATGTACACAGTCACACT 59.901 41.667 9.26 0.00 0.00 3.55
1824 3346 4.368315 TGAACTCATGTACACAGTCACAC 58.632 43.478 9.26 4.12 0.00 3.82
1825 3347 4.664150 TGAACTCATGTACACAGTCACA 57.336 40.909 9.26 9.78 0.00 3.58
1826 3348 6.090898 GGTTATGAACTCATGTACACAGTCAC 59.909 42.308 9.26 7.85 37.15 3.67
1827 3349 6.163476 GGTTATGAACTCATGTACACAGTCA 58.837 40.000 9.26 9.36 37.15 3.41
1828 3350 5.581085 GGGTTATGAACTCATGTACACAGTC 59.419 44.000 9.26 5.12 37.15 3.51
1829 3351 5.488341 GGGTTATGAACTCATGTACACAGT 58.512 41.667 0.00 0.00 37.15 3.55
1830 3352 4.566759 CGGGTTATGAACTCATGTACACAG 59.433 45.833 0.00 0.00 37.15 3.66
1853 3375 1.820519 TGAGCATTTCTTCACCCATGC 59.179 47.619 0.00 0.00 42.05 4.06
1876 3398 9.461312 ACCTAGAAATGATGTGCTATTTAACAA 57.539 29.630 0.00 0.00 0.00 2.83
1886 3408 3.561725 GTGGCTACCTAGAAATGATGTGC 59.438 47.826 0.00 0.00 0.00 4.57
1903 3425 2.993264 GCATTGTGGCTGGTGGCT 60.993 61.111 0.00 0.00 41.46 4.75
1904 3426 4.073200 GGCATTGTGGCTGGTGGC 62.073 66.667 0.00 0.00 40.14 5.01
1905 3427 2.208619 TTGGCATTGTGGCTGGTGG 61.209 57.895 5.12 0.00 44.10 4.61
1906 3428 1.005867 GTTGGCATTGTGGCTGGTG 60.006 57.895 5.12 0.00 44.10 4.17
1907 3429 1.047596 TTGTTGGCATTGTGGCTGGT 61.048 50.000 5.12 0.00 44.10 4.00
1908 3430 0.106335 TTTGTTGGCATTGTGGCTGG 59.894 50.000 5.12 0.00 44.10 4.85
1909 3431 1.950828 TTTTGTTGGCATTGTGGCTG 58.049 45.000 5.12 0.00 44.10 4.85
1932 3454 5.581126 TCTTATTGATGTTTGTCATGGCC 57.419 39.130 0.00 0.00 36.83 5.36
1946 3468 3.133003 GGGCTCTAGTGTGCTCTTATTGA 59.867 47.826 0.00 0.00 33.63 2.57
1947 3469 3.118629 TGGGCTCTAGTGTGCTCTTATTG 60.119 47.826 6.58 0.00 34.54 1.90
1964 3486 3.685550 CGATGAAATCCTACCTTTGGGCT 60.686 47.826 0.00 0.00 41.39 5.19
1970 3492 1.810412 GCGGCGATGAAATCCTACCTT 60.810 52.381 12.98 0.00 41.39 3.50
1971 3493 0.249911 GCGGCGATGAAATCCTACCT 60.250 55.000 12.98 0.00 41.39 3.08
1999 3521 6.032717 GCTCAAAAATATTTGCCTCTCAGAC 58.967 40.000 0.39 0.00 44.52 3.51
2009 3531 7.486870 GGTACTTAACGGGCTCAAAAATATTTG 59.513 37.037 0.39 0.00 45.92 2.32
2010 3532 7.395206 AGGTACTTAACGGGCTCAAAAATATTT 59.605 33.333 0.00 0.00 27.25 1.40
2013 3535 5.807909 AGGTACTTAACGGGCTCAAAAATA 58.192 37.500 0.00 0.00 27.25 1.40
2047 3569 2.758423 ACCTAATCGGACCAAATTTGGC 59.242 45.455 32.65 24.60 43.73 4.52
2052 3574 3.279434 GAGCAACCTAATCGGACCAAAT 58.721 45.455 0.00 0.00 36.31 2.32
2078 3701 3.969976 TGCCTCTGCTCCTAATATCTTGT 59.030 43.478 0.00 0.00 38.71 3.16
2093 3716 0.387202 CGAGGTCCATAGTGCCTCTG 59.613 60.000 8.01 0.00 44.83 3.35
2099 3722 1.586422 CATTGCCGAGGTCCATAGTG 58.414 55.000 0.00 0.00 0.00 2.74
2100 3723 0.469917 CCATTGCCGAGGTCCATAGT 59.530 55.000 0.00 0.00 0.00 2.12
2104 3727 2.063015 AACACCATTGCCGAGGTCCA 62.063 55.000 0.00 0.00 35.52 4.02
2112 3735 1.399215 CGTTACGTGAACACCATTGCC 60.399 52.381 0.00 0.00 37.99 4.52
2124 3747 0.038526 AAGGAGAGCACCGTTACGTG 60.039 55.000 3.52 3.62 36.80 4.49
2128 3751 1.295423 GCCAAGGAGAGCACCGTTA 59.705 57.895 0.00 0.00 34.73 3.18
2187 3918 2.286935 TCCCCCTCTATGGCTCTTTT 57.713 50.000 0.00 0.00 0.00 2.27
2191 3922 0.106894 CGTTTCCCCCTCTATGGCTC 59.893 60.000 0.00 0.00 0.00 4.70
2194 3925 1.497161 AGTCGTTTCCCCCTCTATGG 58.503 55.000 0.00 0.00 0.00 2.74
2203 3934 2.074576 GACAAAGGCTAGTCGTTTCCC 58.925 52.381 4.54 0.00 31.07 3.97
2205 3936 3.364068 GCTTGACAAAGGCTAGTCGTTTC 60.364 47.826 13.28 0.00 37.58 2.78
2247 3978 0.037734 GGGTGGAATGGAAACCTCGT 59.962 55.000 0.00 0.00 34.24 4.18
2251 3982 1.893137 GTCTTGGGTGGAATGGAAACC 59.107 52.381 0.00 0.00 0.00 3.27
2303 4034 7.881775 AAGGATGACATTTGGTAGGAATTAC 57.118 36.000 0.00 0.00 0.00 1.89
2382 4113 4.989875 AAGGACTAGGAATCCATGATGG 57.010 45.455 4.74 4.74 38.86 3.51
2383 4114 5.933617 TCAAAGGACTAGGAATCCATGATG 58.066 41.667 0.61 0.00 38.86 3.07
2402 4133 9.638239 GTATTCTTTGTTGCCTCAAATATCAAA 57.362 29.630 4.34 0.00 36.83 2.69
2403 4134 9.023962 AGTATTCTTTGTTGCCTCAAATATCAA 57.976 29.630 4.34 0.00 36.83 2.57
2405 4136 9.508567 GAAGTATTCTTTGTTGCCTCAAATATC 57.491 33.333 4.34 0.00 43.23 1.63
2451 4183 6.482898 TGCCAAAATGATAGCCAACATAAT 57.517 33.333 0.00 0.00 0.00 1.28
2472 4204 5.825507 ACTGTTCACTCAAGATTCTTTTGC 58.174 37.500 0.00 0.00 0.00 3.68
2488 4220 7.390440 AGAATTTTACGATGGATTGACTGTTCA 59.610 33.333 0.00 0.00 0.00 3.18
2542 4281 9.847706 GTCTTGAGTAGTATGGTCATGTATATG 57.152 37.037 0.00 0.00 35.57 1.78
2581 4327 0.923358 TGACAGGGGGTTGTCTTGTT 59.077 50.000 7.56 0.00 46.00 2.83
2593 4343 2.436173 GGGTAAGATCCTCTTGACAGGG 59.564 54.545 0.00 0.00 37.29 4.45
2596 4346 4.361783 TCATGGGTAAGATCCTCTTGACA 58.638 43.478 0.00 0.00 37.29 3.58
2599 4349 5.365021 AGTTCATGGGTAAGATCCTCTTG 57.635 43.478 0.00 0.00 37.29 3.02
2608 4358 5.364157 AGAGGCTTAGTAGTTCATGGGTAAG 59.636 44.000 0.00 0.00 0.00 2.34
2613 4363 5.127845 TCAGAAGAGGCTTAGTAGTTCATGG 59.872 44.000 0.00 0.00 0.00 3.66
2615 4365 6.859112 TTCAGAAGAGGCTTAGTAGTTCAT 57.141 37.500 0.00 0.00 0.00 2.57
2620 4370 5.669164 AGGTTTCAGAAGAGGCTTAGTAG 57.331 43.478 0.00 0.00 0.00 2.57
2624 4374 5.513267 GGAGAAAGGTTTCAGAAGAGGCTTA 60.513 44.000 5.30 0.00 39.61 3.09
2628 4378 4.357918 TGGAGAAAGGTTTCAGAAGAGG 57.642 45.455 5.30 0.00 39.61 3.69
2639 4389 2.373502 CTGGAAGAGGTTGGAGAAAGGT 59.626 50.000 0.00 0.00 34.07 3.50
2662 4412 7.790027 TCATTTTTGGAGACTTTGGAATTCAA 58.210 30.769 7.93 0.00 0.00 2.69
2674 4424 8.836413 TCGGTATTCATATTCATTTTTGGAGAC 58.164 33.333 0.00 0.00 0.00 3.36
2684 4434 6.866770 CGTGTTACCTCGGTATTCATATTCAT 59.133 38.462 0.00 0.00 0.00 2.57
2712 4462 0.182299 TGCCATGTGACAACTCCACA 59.818 50.000 0.00 0.00 46.90 4.17
2714 4464 0.182299 TGTGCCATGTGACAACTCCA 59.818 50.000 0.00 0.00 0.00 3.86
2719 4469 0.464554 TCGGTTGTGCCATGTGACAA 60.465 50.000 0.00 3.29 36.97 3.18
2732 4482 5.295292 AGCAATATTCTGAGTTGATCGGTTG 59.705 40.000 0.00 0.00 35.60 3.77
2734 4484 5.028549 AGCAATATTCTGAGTTGATCGGT 57.971 39.130 0.00 0.00 35.60 4.69
2737 4487 5.333187 CGCTGAGCAATATTCTGAGTTGATC 60.333 44.000 4.88 9.39 38.39 2.92
2760 4510 4.111375 AGTTGTAGTCTTGTAGATGCCG 57.889 45.455 0.00 0.00 0.00 5.69
2773 4523 9.811995 GTTATTTTTCTTTTGGGAAGTTGTAGT 57.188 29.630 0.00 0.00 0.00 2.73
2774 4524 9.810545 TGTTATTTTTCTTTTGGGAAGTTGTAG 57.189 29.630 0.00 0.00 0.00 2.74
2776 4526 9.108284 CATGTTATTTTTCTTTTGGGAAGTTGT 57.892 29.630 0.00 0.00 0.00 3.32
2777 4527 8.069574 GCATGTTATTTTTCTTTTGGGAAGTTG 58.930 33.333 0.00 0.00 0.00 3.16
2778 4528 7.992608 AGCATGTTATTTTTCTTTTGGGAAGTT 59.007 29.630 0.00 0.00 0.00 2.66
2779 4529 7.508687 AGCATGTTATTTTTCTTTTGGGAAGT 58.491 30.769 0.00 0.00 0.00 3.01
2780 4530 7.874528 AGAGCATGTTATTTTTCTTTTGGGAAG 59.125 33.333 0.00 0.00 0.00 3.46
2781 4531 7.734942 AGAGCATGTTATTTTTCTTTTGGGAA 58.265 30.769 0.00 0.00 0.00 3.97
2782 4532 7.301868 AGAGCATGTTATTTTTCTTTTGGGA 57.698 32.000 0.00 0.00 0.00 4.37
2783 4533 7.967890 AAGAGCATGTTATTTTTCTTTTGGG 57.032 32.000 0.00 0.00 0.00 4.12
2855 4605 0.392327 GCTCTCAACCTCAAGCTCCC 60.392 60.000 0.00 0.00 0.00 4.30
2870 4620 1.134848 GCATGACCTCGAGAAAGCTCT 60.135 52.381 15.71 0.00 39.06 4.09
2890 4640 9.490663 GTGGATGTAACGATTCTTTTTATGAAG 57.509 33.333 0.00 0.00 0.00 3.02
2892 4642 8.554835 TGTGGATGTAACGATTCTTTTTATGA 57.445 30.769 0.00 0.00 0.00 2.15
2905 4655 3.687212 TGCATAACCTTGTGGATGTAACG 59.313 43.478 0.00 0.00 37.04 3.18
2932 4682 2.426024 AGTTGACATGCAGATTGATGGC 59.574 45.455 0.00 0.00 0.00 4.40
2945 4695 4.311816 CTGAAAGTGCCAAAGTTGACAT 57.688 40.909 0.00 0.00 0.00 3.06
2966 4716 3.561725 GCCTACATGCTTGTCATCCTAAC 59.438 47.826 8.74 0.00 37.28 2.34
3025 4775 0.914902 AGGTTTGAGGTAGAGGGGCC 60.915 60.000 0.00 0.00 0.00 5.80
3026 4776 0.992695 AAGGTTTGAGGTAGAGGGGC 59.007 55.000 0.00 0.00 0.00 5.80
3087 4837 1.204146 TTAGAGGGAGTGTGGCCATC 58.796 55.000 9.72 1.45 36.51 3.51
3090 4840 2.116238 TGTATTAGAGGGAGTGTGGCC 58.884 52.381 0.00 0.00 0.00 5.36
3115 4866 2.281484 GGCGTGCTTGGGTTGAGA 60.281 61.111 0.00 0.00 0.00 3.27
3130 4881 5.248870 TGTCTTTTTCTCTTCAAAGTGGC 57.751 39.130 0.00 0.00 32.67 5.01
3135 4886 9.927668 AAGTCAAATTGTCTTTTTCTCTTCAAA 57.072 25.926 0.00 0.00 0.00 2.69
3139 4890 9.741647 GATGAAGTCAAATTGTCTTTTTCTCTT 57.258 29.630 6.90 0.00 0.00 2.85
3252 5032 1.382695 GGGAGGGACATCCGGAAGA 60.383 63.158 14.76 0.00 40.56 2.87
3279 5059 0.576328 TCGGCGTACACAAACGAAAC 59.424 50.000 6.85 0.00 45.68 2.78
3281 5061 0.576328 GTTCGGCGTACACAAACGAA 59.424 50.000 11.92 0.00 45.68 3.85
3293 5073 1.758319 ATTAATCGCGTGGTTCGGCG 61.758 55.000 5.77 0.00 40.26 6.46
3372 5164 5.640783 GTCATCAGTTCATCACACAAGATCA 59.359 40.000 0.00 0.00 0.00 2.92
3475 5267 6.206498 GTTCTGAACAACACCTTAACATTCC 58.794 40.000 15.34 0.00 0.00 3.01
3501 5293 1.802365 ACGAACTTTATCCGCACCAAC 59.198 47.619 0.00 0.00 0.00 3.77
3505 5297 3.059461 TCAAACACGAACTTTATCCGCAC 60.059 43.478 0.00 0.00 0.00 5.34
3548 5340 5.212194 CACATCAGTTTTCCCAGTTTTACG 58.788 41.667 0.00 0.00 0.00 3.18
3558 5350 6.202762 GGAAATCAAAACCACATCAGTTTTCC 59.797 38.462 0.00 0.00 43.67 3.13
3572 5364 6.866480 TCTATTGAGGCATGGAAATCAAAAC 58.134 36.000 0.00 0.00 35.47 2.43
3573 5365 7.494211 CATCTATTGAGGCATGGAAATCAAAA 58.506 34.615 0.00 0.00 35.47 2.44
3574 5366 7.046292 CATCTATTGAGGCATGGAAATCAAA 57.954 36.000 0.00 0.00 35.47 2.69
3575 5367 6.644248 CATCTATTGAGGCATGGAAATCAA 57.356 37.500 0.00 0.00 36.22 2.57
3631 5423 5.968254 TGATAGTATGCGTGTAACCTGAAA 58.032 37.500 0.00 0.00 0.00 2.69
3657 5449 1.298859 GCAGTTTGTCACCCTAGCGG 61.299 60.000 0.00 0.00 37.81 5.52
3659 5451 0.602905 ACGCAGTTTGTCACCCTAGC 60.603 55.000 0.00 0.00 37.78 3.42
3660 5452 3.606886 ACGCAGTTTGTCACCCTAG 57.393 52.632 0.00 0.00 37.78 3.02
3677 5469 5.413309 TGAGAGGATCCTGAAAGAAGAAC 57.587 43.478 22.02 0.00 34.07 3.01
3710 5502 1.272490 CTCTTGTACTTCTCACGCCCA 59.728 52.381 0.00 0.00 0.00 5.36
3755 5547 8.832735 TCAATCCTTACCACTATAGGTTTTTCT 58.167 33.333 4.43 0.00 43.08 2.52
3766 5558 4.215908 AGCTCGATCAATCCTTACCACTA 58.784 43.478 0.00 0.00 0.00 2.74
3767 5559 3.034635 AGCTCGATCAATCCTTACCACT 58.965 45.455 0.00 0.00 0.00 4.00
3806 5598 9.100197 TGTGGTGAACATATATGAGTGGTATAT 57.900 33.333 19.63 0.00 32.36 0.86
3807 5599 8.485578 TGTGGTGAACATATATGAGTGGTATA 57.514 34.615 19.63 0.00 32.36 1.47
3808 5600 7.373617 TGTGGTGAACATATATGAGTGGTAT 57.626 36.000 19.63 0.00 32.36 2.73
3809 5601 6.800072 TGTGGTGAACATATATGAGTGGTA 57.200 37.500 19.63 0.00 32.36 3.25
3810 5602 5.692115 TGTGGTGAACATATATGAGTGGT 57.308 39.130 19.63 0.00 32.36 4.16
3840 5632 6.489700 TCATCCACATGCATAATTAAACCGAT 59.510 34.615 0.00 0.00 0.00 4.18
3860 5652 2.159379 GGGACTGATTTTGCGTTCATCC 60.159 50.000 0.00 0.00 0.00 3.51
4106 5898 0.109272 GGATGAACTGCGAGTCGACA 60.109 55.000 18.61 12.78 0.00 4.35
4122 5914 1.417890 CCCGCTGATCTGGTTTAGGAT 59.582 52.381 1.46 0.00 0.00 3.24
4127 5919 1.377725 CTGCCCGCTGATCTGGTTT 60.378 57.895 1.46 0.00 0.00 3.27
4160 5952 0.609406 CAGAGAGGTCCCACGACTCA 60.609 60.000 0.00 0.00 39.15 3.41
4283 6075 0.174845 TATCGTCCTTGTTCAGCCGG 59.825 55.000 0.00 0.00 0.00 6.13
4295 6087 6.459848 CGGGATAGACCTCAATATTATCGTCC 60.460 46.154 0.00 0.00 38.98 4.79
4325 6117 0.752009 CCTTCGTCGGATCTCCCAGA 60.752 60.000 0.00 0.00 34.14 3.86
4337 6129 4.864916 TGTATGTACTCGTACCTTCGTC 57.135 45.455 4.89 0.00 35.77 4.20
4348 6140 8.946085 TCCACAAAAGAAATCATGTATGTACTC 58.054 33.333 0.00 0.00 0.00 2.59
4350 6142 8.730680 AGTCCACAAAAGAAATCATGTATGTAC 58.269 33.333 0.00 0.00 0.00 2.90
4351 6143 8.729756 CAGTCCACAAAAGAAATCATGTATGTA 58.270 33.333 0.00 0.00 0.00 2.29
4352 6144 7.596494 CAGTCCACAAAAGAAATCATGTATGT 58.404 34.615 0.00 0.00 0.00 2.29
4353 6145 6.529125 GCAGTCCACAAAAGAAATCATGTATG 59.471 38.462 0.00 0.00 0.00 2.39
4355 6147 5.769662 AGCAGTCCACAAAAGAAATCATGTA 59.230 36.000 0.00 0.00 0.00 2.29
4356 6148 4.586001 AGCAGTCCACAAAAGAAATCATGT 59.414 37.500 0.00 0.00 0.00 3.21
4357 6149 5.130292 AGCAGTCCACAAAAGAAATCATG 57.870 39.130 0.00 0.00 0.00 3.07
4358 6150 5.069516 ACAAGCAGTCCACAAAAGAAATCAT 59.930 36.000 0.00 0.00 0.00 2.45
4359 6151 4.402155 ACAAGCAGTCCACAAAAGAAATCA 59.598 37.500 0.00 0.00 0.00 2.57
4360 6152 4.741676 CACAAGCAGTCCACAAAAGAAATC 59.258 41.667 0.00 0.00 0.00 2.17
4361 6153 4.160252 ACACAAGCAGTCCACAAAAGAAAT 59.840 37.500 0.00 0.00 0.00 2.17
4362 6154 3.509575 ACACAAGCAGTCCACAAAAGAAA 59.490 39.130 0.00 0.00 0.00 2.52
4370 6162 1.102978 AACCAACACAAGCAGTCCAC 58.897 50.000 0.00 0.00 0.00 4.02
4373 6165 2.618241 TGATCAACCAACACAAGCAGTC 59.382 45.455 0.00 0.00 0.00 3.51
4374 6166 2.620115 CTGATCAACCAACACAAGCAGT 59.380 45.455 0.00 0.00 0.00 4.40
4379 6171 3.766591 ACCAAACTGATCAACCAACACAA 59.233 39.130 0.00 0.00 0.00 3.33
4382 6174 3.766591 ACAACCAAACTGATCAACCAACA 59.233 39.130 0.00 0.00 0.00 3.33
4383 6175 4.111916 CACAACCAAACTGATCAACCAAC 58.888 43.478 0.00 0.00 0.00 3.77
4384 6176 3.430098 GCACAACCAAACTGATCAACCAA 60.430 43.478 0.00 0.00 0.00 3.67
4385 6177 2.100584 GCACAACCAAACTGATCAACCA 59.899 45.455 0.00 0.00 0.00 3.67
4386 6178 2.545742 GGCACAACCAAACTGATCAACC 60.546 50.000 0.00 0.00 38.86 3.77
4387 6179 2.742774 GGCACAACCAAACTGATCAAC 58.257 47.619 0.00 0.00 38.86 3.18
4408 6207 2.490903 GCACAAGACTCCATCAGCAATT 59.509 45.455 0.00 0.00 0.00 2.32
4412 6211 1.400846 CATGCACAAGACTCCATCAGC 59.599 52.381 0.00 0.00 0.00 4.26
4417 6216 1.456296 GCATCATGCACAAGACTCCA 58.544 50.000 4.20 0.00 44.26 3.86
4428 6236 3.242543 CCTCGTAAAGAACTGCATCATGC 60.243 47.826 1.35 1.35 45.29 4.06
4453 6261 2.094026 CACGTCCTGGTTCAGATCATCA 60.094 50.000 0.00 0.00 32.44 3.07
4563 6371 4.188247 TCCAAGTGTTCTTCAGATACGG 57.812 45.455 0.00 0.00 0.00 4.02
4567 6375 5.624159 TGACATTCCAAGTGTTCTTCAGAT 58.376 37.500 0.00 0.00 0.00 2.90
4568 6376 5.034852 TGACATTCCAAGTGTTCTTCAGA 57.965 39.130 0.00 0.00 0.00 3.27
4574 6382 3.820467 TCACCATGACATTCCAAGTGTTC 59.180 43.478 0.00 0.00 0.00 3.18
4575 6383 3.831323 TCACCATGACATTCCAAGTGTT 58.169 40.909 0.00 0.00 0.00 3.32
4576 6384 3.507162 TCACCATGACATTCCAAGTGT 57.493 42.857 0.00 0.00 0.00 3.55
4577 6385 3.822735 AGTTCACCATGACATTCCAAGTG 59.177 43.478 0.00 0.00 0.00 3.16
4578 6386 4.074970 GAGTTCACCATGACATTCCAAGT 58.925 43.478 0.00 0.00 0.00 3.16
4579 6387 3.125829 CGAGTTCACCATGACATTCCAAG 59.874 47.826 0.00 0.00 0.00 3.61
4580 6388 3.073678 CGAGTTCACCATGACATTCCAA 58.926 45.455 0.00 0.00 0.00 3.53
4581 6389 2.301583 TCGAGTTCACCATGACATTCCA 59.698 45.455 0.00 0.00 0.00 3.53
4582 6390 2.972625 TCGAGTTCACCATGACATTCC 58.027 47.619 0.00 0.00 0.00 3.01
4583 6391 4.437239 AGATCGAGTTCACCATGACATTC 58.563 43.478 0.00 0.00 0.00 2.67
4584 6392 4.437239 GAGATCGAGTTCACCATGACATT 58.563 43.478 0.00 0.00 0.00 2.71
4585 6393 3.181471 GGAGATCGAGTTCACCATGACAT 60.181 47.826 0.00 0.00 0.00 3.06
4586 6394 2.166459 GGAGATCGAGTTCACCATGACA 59.834 50.000 0.00 0.00 0.00 3.58
4587 6395 2.166459 TGGAGATCGAGTTCACCATGAC 59.834 50.000 1.54 0.00 32.32 3.06
4588 6396 2.428530 CTGGAGATCGAGTTCACCATGA 59.571 50.000 5.77 0.00 36.07 3.07
4589 6397 2.428530 TCTGGAGATCGAGTTCACCATG 59.571 50.000 5.77 2.14 36.07 3.66
4590 6398 2.739943 TCTGGAGATCGAGTTCACCAT 58.260 47.619 5.77 0.00 36.07 3.55
4591 6399 2.215942 TCTGGAGATCGAGTTCACCA 57.784 50.000 5.28 5.28 35.45 4.17
4592 6400 3.131223 TCATTCTGGAGATCGAGTTCACC 59.869 47.826 0.00 0.00 0.00 4.02
4593 6401 4.358851 CTCATTCTGGAGATCGAGTTCAC 58.641 47.826 0.00 0.00 37.05 3.18
4594 6402 3.382865 CCTCATTCTGGAGATCGAGTTCA 59.617 47.826 0.00 0.00 37.05 3.18
4595 6403 3.383185 ACCTCATTCTGGAGATCGAGTTC 59.617 47.826 0.00 0.00 37.05 3.01
4596 6404 3.370104 ACCTCATTCTGGAGATCGAGTT 58.630 45.455 0.00 0.00 37.05 3.01
4597 6405 3.025322 ACCTCATTCTGGAGATCGAGT 57.975 47.619 0.00 0.00 37.05 4.18
4598 6406 3.131933 ACAACCTCATTCTGGAGATCGAG 59.868 47.826 0.00 0.00 37.05 4.04
4599 6407 3.099905 ACAACCTCATTCTGGAGATCGA 58.900 45.455 0.00 0.00 37.05 3.59
4600 6408 3.193263 CACAACCTCATTCTGGAGATCG 58.807 50.000 0.00 0.00 37.05 3.69
4601 6409 3.937706 CACACAACCTCATTCTGGAGATC 59.062 47.826 0.00 0.00 37.05 2.75
4602 6410 3.328931 ACACACAACCTCATTCTGGAGAT 59.671 43.478 0.00 0.00 37.05 2.75
4608 6416 9.982651 GTATGTATATACACACAACCTCATTCT 57.017 33.333 17.69 0.00 39.30 2.40
4613 6421 8.148351 ACATGGTATGTATATACACACAACCTC 58.852 37.037 22.36 8.17 42.78 3.85
4711 6521 1.295101 CGTGCACCCACTGACCATA 59.705 57.895 12.15 0.00 39.86 2.74
4722 6532 2.201732 CCAGACATATACACGTGCACC 58.798 52.381 17.22 0.00 0.00 5.01
4725 6535 1.934589 TGCCAGACATATACACGTGC 58.065 50.000 17.22 0.00 0.00 5.34
4726 6536 4.119136 TCAATGCCAGACATATACACGTG 58.881 43.478 15.48 15.48 38.34 4.49
4727 6537 4.400529 TCAATGCCAGACATATACACGT 57.599 40.909 0.00 0.00 38.34 4.49
4728 6538 4.389992 GGATCAATGCCAGACATATACACG 59.610 45.833 0.00 0.00 38.34 4.49
4729 6539 4.697352 GGGATCAATGCCAGACATATACAC 59.303 45.833 0.00 0.00 38.34 2.90
4730 6540 4.598807 AGGGATCAATGCCAGACATATACA 59.401 41.667 3.23 0.00 41.29 2.29
4731 6541 5.171339 AGGGATCAATGCCAGACATATAC 57.829 43.478 3.23 0.00 41.29 1.47
4732 6542 5.515359 CCAAGGGATCAATGCCAGACATATA 60.515 44.000 3.23 0.00 41.29 0.86
4733 6543 4.404640 CAAGGGATCAATGCCAGACATAT 58.595 43.478 3.23 0.00 41.29 1.78
4734 6544 3.435457 CCAAGGGATCAATGCCAGACATA 60.435 47.826 3.23 0.00 41.29 2.29
4735 6545 2.662866 CAAGGGATCAATGCCAGACAT 58.337 47.619 3.23 0.00 41.29 3.06
4736 6546 1.341285 CCAAGGGATCAATGCCAGACA 60.341 52.381 3.23 0.00 41.29 3.41
4737 6547 1.341383 ACCAAGGGATCAATGCCAGAC 60.341 52.381 3.23 0.00 41.29 3.51
4738 6548 1.002069 ACCAAGGGATCAATGCCAGA 58.998 50.000 3.23 0.00 41.29 3.86
4751 6561 1.615107 GACGAGCGACGAAACCAAGG 61.615 60.000 12.62 0.00 45.77 3.61
4761 6571 2.249557 TTCTACAGCCGACGAGCGAC 62.250 60.000 0.00 0.00 44.57 5.19
4764 6574 1.926827 GCTATTCTACAGCCGACGAGC 60.927 57.143 0.00 0.00 32.68 5.03
4766 6576 0.306840 CGCTATTCTACAGCCGACGA 59.693 55.000 0.00 0.00 35.53 4.20
4767 6577 0.306840 TCGCTATTCTACAGCCGACG 59.693 55.000 0.00 0.00 35.53 5.12
4771 6581 1.777101 CTGCTCGCTATTCTACAGCC 58.223 55.000 0.00 0.00 35.53 4.85
4774 6584 1.751351 ACTGCTGCTCGCTATTCTACA 59.249 47.619 0.00 0.00 40.11 2.74
4779 6589 2.208431 GATCAACTGCTGCTCGCTATT 58.792 47.619 0.00 0.00 40.11 1.73
4818 6628 0.967380 CCCTGGCCACTGAAATCACC 60.967 60.000 0.00 0.00 0.00 4.02
4846 6656 1.531149 CAGTGGTAAGTGTTTGCTCCG 59.469 52.381 0.00 0.00 0.00 4.63
4866 6678 1.218854 GTTGCCATTGCCACCATCC 59.781 57.895 0.00 0.00 36.33 3.51
4878 6690 2.747460 GCTGATGCTCCGTTGCCA 60.747 61.111 0.00 0.00 36.03 4.92
4880 6692 2.437359 AGGCTGATGCTCCGTTGC 60.437 61.111 0.00 0.00 39.59 4.17
4881 6693 1.088340 CAGAGGCTGATGCTCCGTTG 61.088 60.000 0.00 0.00 39.59 4.10
4882 6694 1.220206 CAGAGGCTGATGCTCCGTT 59.780 57.895 0.00 0.00 39.59 4.44
4883 6695 2.729479 CCAGAGGCTGATGCTCCGT 61.729 63.158 0.00 0.00 39.59 4.69
4884 6696 2.108566 CCAGAGGCTGATGCTCCG 59.891 66.667 0.00 0.00 39.59 4.63
4941 6789 1.727511 TAACCATCGCGGACGGTAGG 61.728 60.000 6.13 0.39 40.63 3.18
4958 6806 4.805192 ACGCAGAAGTAGAAAAACACGTAA 59.195 37.500 0.00 0.00 0.00 3.18
4974 6822 1.297378 CTACGATCGCGACGCAGAA 60.297 57.895 24.04 4.74 41.64 3.02
4976 6824 3.379625 GCTACGATCGCGACGCAG 61.380 66.667 24.04 21.90 41.64 5.18
5041 6889 4.978099 TCAGAGAAGCAATGGAAAGTTCT 58.022 39.130 0.00 0.00 0.00 3.01
5069 6917 0.685097 AAAGTCTGTGGCTCCGCTAA 59.315 50.000 0.86 0.00 0.00 3.09
5086 6934 3.378112 CGAAATCTAGCTTGGATGGCAAA 59.622 43.478 0.00 0.00 0.00 3.68
5107 6955 1.447317 AAACCTCCACAGCTTGCACG 61.447 55.000 0.00 0.00 0.00 5.34
5119 6967 1.882623 CTGTCTTGCCAGAAAACCTCC 59.117 52.381 0.00 0.00 34.23 4.30
5205 7053 2.154462 CGAGATGAAACCACTGGCTTT 58.846 47.619 0.00 0.00 0.00 3.51
5226 7074 0.179062 AATCAGCATCACCCGAGAGC 60.179 55.000 0.00 0.00 0.00 4.09
5229 7077 0.179100 ACGAATCAGCATCACCCGAG 60.179 55.000 0.00 0.00 0.00 4.63
5230 7078 0.249120 AACGAATCAGCATCACCCGA 59.751 50.000 0.00 0.00 0.00 5.14
5271 7119 2.741228 GCAGCTCTACATTCTCCAGTGG 60.741 54.545 1.40 1.40 0.00 4.00
5281 7129 3.493350 CGTAATTCAGGGCAGCTCTACAT 60.493 47.826 0.00 0.00 0.00 2.29
5284 7132 1.202533 GCGTAATTCAGGGCAGCTCTA 60.203 52.381 0.00 0.00 0.00 2.43
5343 7191 8.114331 TGTTCTGCTTCAATTACTTTCATGAT 57.886 30.769 0.00 0.00 0.00 2.45
5344 7192 7.509141 TGTTCTGCTTCAATTACTTTCATGA 57.491 32.000 0.00 0.00 0.00 3.07
5345 7193 9.499585 CTATGTTCTGCTTCAATTACTTTCATG 57.500 33.333 0.00 0.00 0.00 3.07
5368 7216 5.339008 TCGCCTACTTTGTGTTCATCTAT 57.661 39.130 0.00 0.00 0.00 1.98
5377 7228 3.314541 AGTTACCTCGCCTACTTTGTG 57.685 47.619 0.00 0.00 0.00 3.33
5384 7235 3.347216 ACGAGTAAAGTTACCTCGCCTA 58.653 45.455 18.73 0.00 37.58 3.93
5390 7241 6.040166 TCTGACTGAAACGAGTAAAGTTACCT 59.960 38.462 0.00 0.00 34.19 3.08
5391 7242 6.211515 TCTGACTGAAACGAGTAAAGTTACC 58.788 40.000 0.00 0.00 34.19 2.85
5463 7314 1.615883 CTCCTGAGGTATCACGATGGG 59.384 57.143 0.00 0.00 0.00 4.00
5500 7351 0.245266 TCGTCGCCACATGTGTGTAT 59.755 50.000 23.79 0.00 44.21 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.