Multiple sequence alignment - TraesCS3A01G415000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G415000 chr3A 100.000 4247 0 0 1 4247 658302566 658306812 0.000000e+00 7843.0
1 TraesCS3A01G415000 chr3A 86.217 2757 307 45 970 3691 658289022 658291740 0.000000e+00 2918.0
2 TraesCS3A01G415000 chr3A 95.161 496 10 8 3569 4050 658247899 658248394 0.000000e+00 771.0
3 TraesCS3A01G415000 chr3A 99.020 102 1 0 4048 4149 658251943 658252044 2.610000e-42 183.0
4 TraesCS3A01G415000 chr3A 97.143 105 3 0 4143 4247 387716358 387716254 1.210000e-40 178.0
5 TraesCS3A01G415000 chr3B 93.623 2258 135 7 964 3219 690430464 690432714 0.000000e+00 3363.0
6 TraesCS3A01G415000 chr3B 82.327 2750 412 43 991 3709 642215556 642212850 0.000000e+00 2318.0
7 TraesCS3A01G415000 chr3B 83.850 2260 340 21 970 3216 690459856 690462103 0.000000e+00 2128.0
8 TraesCS3A01G415000 chr3B 82.444 2512 357 49 1237 3702 689007206 689004733 0.000000e+00 2119.0
9 TraesCS3A01G415000 chr3B 82.358 2341 372 33 948 3274 690446867 690449180 0.000000e+00 1997.0
10 TraesCS3A01G415000 chr3B 82.022 2364 368 40 993 3335 690442810 690445137 0.000000e+00 1958.0
11 TraesCS3A01G415000 chr3B 91.731 907 42 15 3252 4133 690432715 690433613 0.000000e+00 1229.0
12 TraesCS3A01G415000 chr3B 89.286 420 31 5 3712 4128 642211431 642211023 8.140000e-142 514.0
13 TraesCS3A01G415000 chr3B 85.915 142 10 7 3813 3948 689352614 689352477 4.430000e-30 143.0
14 TraesCS3A01G415000 chr3D 83.396 3180 441 52 991 4136 523334572 523337698 0.000000e+00 2867.0
15 TraesCS3A01G415000 chr3D 82.244 2585 386 44 948 3497 523407831 523410377 0.000000e+00 2163.0
16 TraesCS3A01G415000 chr3D 81.373 2346 382 40 948 3276 523555289 523557596 0.000000e+00 1860.0
17 TraesCS3A01G415000 chr3D 83.138 1880 279 26 970 2836 523379428 523381282 0.000000e+00 1681.0
18 TraesCS3A01G415000 chr3D 80.973 1645 265 36 948 2578 523560132 523561742 0.000000e+00 1260.0
19 TraesCS3A01G415000 chr3D 86.266 233 13 7 381 612 523554700 523554914 7.100000e-58 235.0
20 TraesCS3A01G415000 chr3D 78.065 310 43 12 615 908 523555002 523555302 5.650000e-39 172.0
21 TraesCS3A01G415000 chr3D 92.537 67 5 0 818 884 523407753 523407819 3.500000e-16 97.1
22 TraesCS3A01G415000 chrUn 83.627 2327 332 36 948 3254 330561050 330563347 0.000000e+00 2141.0
23 TraesCS3A01G415000 chrUn 79.509 2279 365 55 1467 3687 342677752 342679986 0.000000e+00 1528.0
24 TraesCS3A01G415000 chrUn 96.248 693 12 8 3569 4247 353196829 353197521 0.000000e+00 1123.0
25 TraesCS3A01G415000 chrUn 83.137 510 72 9 948 1456 454390236 454389740 1.800000e-123 453.0
26 TraesCS3A01G415000 chrUn 95.726 234 9 1 3338 3571 353196159 353196391 4.010000e-100 375.0
27 TraesCS3A01G415000 chrUn 95.726 234 9 1 3338 3571 471389950 471389718 4.010000e-100 375.0
28 TraesCS3A01G415000 chrUn 80.216 278 49 6 1259 1533 475133528 475133254 2.000000e-48 204.0
29 TraesCS3A01G415000 chr7B 94.498 309 11 2 76 383 680906072 680905769 4.970000e-129 472.0
30 TraesCS3A01G415000 chr7A 91.409 291 14 5 98 382 693472492 693472207 5.150000e-104 388.0
31 TraesCS3A01G415000 chr7A 99.000 100 1 0 4148 4247 581263354 581263255 3.370000e-41 180.0
32 TraesCS3A01G415000 chr7A 97.959 98 2 0 4150 4247 177697543 177697446 2.030000e-38 171.0
33 TraesCS3A01G415000 chr7D 81.496 254 31 8 88 334 602399448 602399692 1.200000e-45 195.0
34 TraesCS3A01G415000 chr7D 77.344 256 34 9 76 309 602015575 602015322 3.450000e-26 130.0
35 TraesCS3A01G415000 chr2A 95.575 113 4 1 4135 4247 560798937 560798826 3.370000e-41 180.0
36 TraesCS3A01G415000 chr5A 96.190 105 4 0 4143 4247 683210608 683210504 5.650000e-39 172.0
37 TraesCS3A01G415000 chr1A 95.327 107 3 2 4141 4247 204897576 204897680 7.300000e-38 169.0
38 TraesCS3A01G415000 chr1A 92.308 117 6 3 4133 4247 538608073 538607958 3.400000e-36 163.0
39 TraesCS3A01G415000 chr4A 93.750 112 5 2 4137 4247 284993327 284993437 2.630000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G415000 chr3A 658302566 658306812 4246 False 7843.00 7843 100.00000 1 4247 1 chr3A.!!$F2 4246
1 TraesCS3A01G415000 chr3A 658289022 658291740 2718 False 2918.00 2918 86.21700 970 3691 1 chr3A.!!$F1 2721
2 TraesCS3A01G415000 chr3A 658247899 658252044 4145 False 477.00 771 97.09050 3569 4149 2 chr3A.!!$F3 580
3 TraesCS3A01G415000 chr3B 690430464 690433613 3149 False 2296.00 3363 92.67700 964 4133 2 chr3B.!!$F2 3169
4 TraesCS3A01G415000 chr3B 690459856 690462103 2247 False 2128.00 2128 83.85000 970 3216 1 chr3B.!!$F1 2246
5 TraesCS3A01G415000 chr3B 689004733 689007206 2473 True 2119.00 2119 82.44400 1237 3702 1 chr3B.!!$R1 2465
6 TraesCS3A01G415000 chr3B 690442810 690449180 6370 False 1977.50 1997 82.19000 948 3335 2 chr3B.!!$F3 2387
7 TraesCS3A01G415000 chr3B 642211023 642215556 4533 True 1416.00 2318 85.80650 991 4128 2 chr3B.!!$R3 3137
8 TraesCS3A01G415000 chr3D 523334572 523337698 3126 False 2867.00 2867 83.39600 991 4136 1 chr3D.!!$F1 3145
9 TraesCS3A01G415000 chr3D 523379428 523381282 1854 False 1681.00 1681 83.13800 970 2836 1 chr3D.!!$F2 1866
10 TraesCS3A01G415000 chr3D 523407753 523410377 2624 False 1130.05 2163 87.39050 818 3497 2 chr3D.!!$F3 2679
11 TraesCS3A01G415000 chr3D 523554700 523561742 7042 False 881.75 1860 81.66925 381 3276 4 chr3D.!!$F4 2895
12 TraesCS3A01G415000 chrUn 330561050 330563347 2297 False 2141.00 2141 83.62700 948 3254 1 chrUn.!!$F1 2306
13 TraesCS3A01G415000 chrUn 342677752 342679986 2234 False 1528.00 1528 79.50900 1467 3687 1 chrUn.!!$F2 2220
14 TraesCS3A01G415000 chrUn 353196159 353197521 1362 False 749.00 1123 95.98700 3338 4247 2 chrUn.!!$F3 909


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
939 1044 0.033011 ACGACCACCTATCCTCTGCT 60.033 55.000 0.00 0.0 0.00 4.24 F
1293 1413 0.034767 TCGACTTCTCGGCCTTCCTA 60.035 55.000 0.00 0.0 40.58 2.94 F
1303 1423 0.393132 GGCCTTCCTACACCTGAAGC 60.393 60.000 0.00 0.0 37.29 3.86 F
1390 1510 1.066215 TGGTCGTGTTGGAGATCATGG 60.066 52.381 0.00 0.0 0.00 3.66 F
1399 1519 1.126488 GGAGATCATGGGCAGTCTGA 58.874 55.000 3.32 0.0 0.00 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2688 2830 2.859165 TTGGGATCTCCTGTGACAAC 57.141 50.000 0.00 0.0 36.20 3.32 R
2990 7229 0.390124 TACGCAGTCTTCCAACGGTT 59.610 50.000 0.00 0.0 43.93 4.44 R
3123 7365 1.260561 GTCTCGCTGCGAAACAAGAAA 59.739 47.619 25.86 0.0 34.74 2.52 R
3222 7467 1.460699 AGGCCCTTTGACCTGGAAC 59.539 57.895 0.00 0.0 34.07 3.62 R
3459 7785 7.863375 GCTACAGATTCAGAATTATGACTACGT 59.137 37.037 1.37 0.0 0.00 3.57 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.902705 TCAAGTGACAGTACCCACAC 57.097 50.000 11.57 8.85 35.84 3.82
20 21 2.394632 TCAAGTGACAGTACCCACACT 58.605 47.619 11.57 10.58 43.92 3.55
28 29 3.469008 CAGTACCCACACTGTTTCTCA 57.531 47.619 0.00 0.00 40.89 3.27
29 30 3.804036 CAGTACCCACACTGTTTCTCAA 58.196 45.455 0.00 0.00 40.89 3.02
30 31 3.560068 CAGTACCCACACTGTTTCTCAAC 59.440 47.826 0.00 0.00 40.89 3.18
31 32 2.799126 ACCCACACTGTTTCTCAACA 57.201 45.000 0.00 0.00 40.82 3.33
32 33 3.297134 ACCCACACTGTTTCTCAACAT 57.703 42.857 0.00 0.00 42.21 2.71
33 34 2.951642 ACCCACACTGTTTCTCAACATG 59.048 45.455 0.00 0.00 42.21 3.21
34 35 2.951642 CCCACACTGTTTCTCAACATGT 59.048 45.455 0.00 0.00 42.21 3.21
35 36 3.243168 CCCACACTGTTTCTCAACATGTG 60.243 47.826 0.00 15.94 42.21 3.21
36 37 3.956233 CACACTGTTTCTCAACATGTGG 58.044 45.455 0.00 0.00 42.21 4.17
37 38 2.951642 ACACTGTTTCTCAACATGTGGG 59.048 45.455 0.00 0.00 42.21 4.61
38 39 2.951642 CACTGTTTCTCAACATGTGGGT 59.048 45.455 0.00 0.00 42.21 4.51
39 40 3.381272 CACTGTTTCTCAACATGTGGGTT 59.619 43.478 0.00 0.00 42.21 4.11
40 41 3.632145 ACTGTTTCTCAACATGTGGGTTC 59.368 43.478 0.00 0.00 42.21 3.62
41 42 3.885297 CTGTTTCTCAACATGTGGGTTCT 59.115 43.478 0.00 0.00 42.21 3.01
42 43 3.882888 TGTTTCTCAACATGTGGGTTCTC 59.117 43.478 0.00 0.00 38.03 2.87
43 44 4.137543 GTTTCTCAACATGTGGGTTCTCT 58.862 43.478 0.00 0.00 32.54 3.10
44 45 5.163248 TGTTTCTCAACATGTGGGTTCTCTA 60.163 40.000 0.00 0.00 38.03 2.43
45 46 5.560722 TTCTCAACATGTGGGTTCTCTAA 57.439 39.130 0.00 0.00 0.00 2.10
46 47 5.762179 TCTCAACATGTGGGTTCTCTAAT 57.238 39.130 0.00 0.00 0.00 1.73
47 48 5.491070 TCTCAACATGTGGGTTCTCTAATG 58.509 41.667 0.00 0.00 0.00 1.90
48 49 5.248248 TCTCAACATGTGGGTTCTCTAATGA 59.752 40.000 0.00 0.00 0.00 2.57
49 50 5.245531 TCAACATGTGGGTTCTCTAATGAC 58.754 41.667 0.00 0.00 0.00 3.06
50 51 3.861840 ACATGTGGGTTCTCTAATGACG 58.138 45.455 0.00 0.00 0.00 4.35
51 52 3.198068 CATGTGGGTTCTCTAATGACGG 58.802 50.000 0.00 0.00 0.00 4.79
52 53 2.253610 TGTGGGTTCTCTAATGACGGT 58.746 47.619 0.00 0.00 0.00 4.83
53 54 3.433343 TGTGGGTTCTCTAATGACGGTA 58.567 45.455 0.00 0.00 0.00 4.02
54 55 3.194116 TGTGGGTTCTCTAATGACGGTAC 59.806 47.826 0.00 0.00 0.00 3.34
55 56 2.762327 TGGGTTCTCTAATGACGGTACC 59.238 50.000 0.16 0.16 0.00 3.34
56 57 2.102084 GGGTTCTCTAATGACGGTACCC 59.898 54.545 6.25 0.00 37.41 3.69
57 58 2.762327 GGTTCTCTAATGACGGTACCCA 59.238 50.000 6.25 0.00 0.00 4.51
58 59 3.429960 GGTTCTCTAATGACGGTACCCAC 60.430 52.174 6.25 0.89 0.00 4.61
59 60 3.090210 TCTCTAATGACGGTACCCACA 57.910 47.619 6.25 7.23 0.00 4.17
60 61 2.756760 TCTCTAATGACGGTACCCACAC 59.243 50.000 6.25 0.00 0.00 3.82
61 62 2.494471 CTCTAATGACGGTACCCACACA 59.506 50.000 6.25 1.93 0.00 3.72
62 63 2.494471 TCTAATGACGGTACCCACACAG 59.506 50.000 6.25 7.92 0.00 3.66
63 64 1.053424 AATGACGGTACCCACACAGT 58.947 50.000 6.25 0.00 0.00 3.55
64 65 1.053424 ATGACGGTACCCACACAGTT 58.947 50.000 6.25 0.00 0.00 3.16
65 66 0.105224 TGACGGTACCCACACAGTTG 59.895 55.000 6.25 0.00 0.00 3.16
66 67 0.105408 GACGGTACCCACACAGTTGT 59.895 55.000 6.25 0.00 35.84 3.32
67 68 0.105408 ACGGTACCCACACAGTTGTC 59.895 55.000 6.25 0.00 31.66 3.18
68 69 0.105224 CGGTACCCACACAGTTGTCA 59.895 55.000 6.25 0.00 31.66 3.58
69 70 1.270625 CGGTACCCACACAGTTGTCAT 60.271 52.381 6.25 0.00 31.66 3.06
70 71 2.808933 CGGTACCCACACAGTTGTCATT 60.809 50.000 6.25 0.00 31.66 2.57
71 72 2.552315 GGTACCCACACAGTTGTCATTG 59.448 50.000 0.00 0.00 31.66 2.82
72 73 2.435372 ACCCACACAGTTGTCATTGT 57.565 45.000 0.00 0.00 31.66 2.71
73 74 3.569194 ACCCACACAGTTGTCATTGTA 57.431 42.857 0.00 0.00 31.66 2.41
74 75 4.098914 ACCCACACAGTTGTCATTGTAT 57.901 40.909 0.00 0.00 31.66 2.29
75 76 4.469657 ACCCACACAGTTGTCATTGTATT 58.530 39.130 0.00 0.00 31.66 1.89
76 77 4.892934 ACCCACACAGTTGTCATTGTATTT 59.107 37.500 0.00 0.00 31.66 1.40
77 78 6.065374 ACCCACACAGTTGTCATTGTATTTA 58.935 36.000 0.00 0.00 31.66 1.40
78 79 6.719370 ACCCACACAGTTGTCATTGTATTTAT 59.281 34.615 0.00 0.00 31.66 1.40
79 80 7.028962 CCCACACAGTTGTCATTGTATTTATG 58.971 38.462 0.00 0.00 31.66 1.90
80 81 7.309133 CCCACACAGTTGTCATTGTATTTATGT 60.309 37.037 0.00 0.00 31.66 2.29
81 82 7.750458 CCACACAGTTGTCATTGTATTTATGTC 59.250 37.037 0.00 0.00 31.66 3.06
82 83 8.506437 CACACAGTTGTCATTGTATTTATGTCT 58.494 33.333 0.00 0.00 31.66 3.41
83 84 9.066892 ACACAGTTGTCATTGTATTTATGTCTT 57.933 29.630 0.00 0.00 0.00 3.01
84 85 9.333497 CACAGTTGTCATTGTATTTATGTCTTG 57.667 33.333 0.00 0.00 0.00 3.02
85 86 8.514594 ACAGTTGTCATTGTATTTATGTCTTGG 58.485 33.333 0.00 0.00 0.00 3.61
86 87 8.729756 CAGTTGTCATTGTATTTATGTCTTGGA 58.270 33.333 0.00 0.00 0.00 3.53
87 88 9.295825 AGTTGTCATTGTATTTATGTCTTGGAA 57.704 29.630 0.00 0.00 0.00 3.53
88 89 9.906660 GTTGTCATTGTATTTATGTCTTGGAAA 57.093 29.630 0.00 0.00 0.00 3.13
103 104 9.717942 ATGTCTTGGAAAATAATAGCTAGCTAG 57.282 33.333 27.42 16.84 31.45 3.42
114 115 2.443820 GCTAGCTAGCGTTTTCAAGC 57.556 50.000 28.89 5.99 39.82 4.01
115 116 1.732259 GCTAGCTAGCGTTTTCAAGCA 59.268 47.619 28.89 0.00 39.82 3.91
116 117 2.352960 GCTAGCTAGCGTTTTCAAGCAT 59.647 45.455 28.89 0.00 39.82 3.79
117 118 3.555956 GCTAGCTAGCGTTTTCAAGCATA 59.444 43.478 28.89 0.00 39.82 3.14
118 119 4.318404 GCTAGCTAGCGTTTTCAAGCATAG 60.318 45.833 28.89 2.11 39.82 2.23
119 120 3.861840 AGCTAGCGTTTTCAAGCATAGA 58.138 40.909 9.55 0.00 37.44 1.98
120 121 4.446371 AGCTAGCGTTTTCAAGCATAGAT 58.554 39.130 9.55 0.00 37.44 1.98
121 122 5.601662 AGCTAGCGTTTTCAAGCATAGATA 58.398 37.500 9.55 0.00 37.44 1.98
122 123 6.049149 AGCTAGCGTTTTCAAGCATAGATAA 58.951 36.000 9.55 0.00 37.44 1.75
123 124 6.538742 AGCTAGCGTTTTCAAGCATAGATAAA 59.461 34.615 9.55 0.00 37.44 1.40
124 125 6.629252 GCTAGCGTTTTCAAGCATAGATAAAC 59.371 38.462 0.00 0.00 35.05 2.01
125 126 5.880341 AGCGTTTTCAAGCATAGATAAACC 58.120 37.500 0.00 0.00 35.48 3.27
126 127 5.414454 AGCGTTTTCAAGCATAGATAAACCA 59.586 36.000 0.00 0.00 35.48 3.67
127 128 5.511729 GCGTTTTCAAGCATAGATAAACCAC 59.488 40.000 0.00 0.00 0.00 4.16
128 129 6.607689 CGTTTTCAAGCATAGATAAACCACA 58.392 36.000 0.00 0.00 0.00 4.17
129 130 7.081349 CGTTTTCAAGCATAGATAAACCACAA 58.919 34.615 0.00 0.00 0.00 3.33
130 131 7.593273 CGTTTTCAAGCATAGATAAACCACAAA 59.407 33.333 0.00 0.00 0.00 2.83
131 132 8.699749 GTTTTCAAGCATAGATAAACCACAAAC 58.300 33.333 0.00 0.00 0.00 2.93
132 133 6.509418 TCAAGCATAGATAAACCACAAACC 57.491 37.500 0.00 0.00 0.00 3.27
133 134 6.007076 TCAAGCATAGATAAACCACAAACCA 58.993 36.000 0.00 0.00 0.00 3.67
134 135 5.897377 AGCATAGATAAACCACAAACCAC 57.103 39.130 0.00 0.00 0.00 4.16
135 136 5.321102 AGCATAGATAAACCACAAACCACA 58.679 37.500 0.00 0.00 0.00 4.17
136 137 5.183140 AGCATAGATAAACCACAAACCACAC 59.817 40.000 0.00 0.00 0.00 3.82
137 138 5.183140 GCATAGATAAACCACAAACCACACT 59.817 40.000 0.00 0.00 0.00 3.55
138 139 6.611381 CATAGATAAACCACAAACCACACTG 58.389 40.000 0.00 0.00 0.00 3.66
139 140 4.787551 AGATAAACCACAAACCACACTGA 58.212 39.130 0.00 0.00 0.00 3.41
140 141 5.385198 AGATAAACCACAAACCACACTGAT 58.615 37.500 0.00 0.00 0.00 2.90
141 142 5.833131 AGATAAACCACAAACCACACTGATT 59.167 36.000 0.00 0.00 0.00 2.57
142 143 4.385358 AAACCACAAACCACACTGATTC 57.615 40.909 0.00 0.00 0.00 2.52
143 144 3.011566 ACCACAAACCACACTGATTCA 57.988 42.857 0.00 0.00 0.00 2.57
144 145 2.951642 ACCACAAACCACACTGATTCAG 59.048 45.455 12.17 12.17 37.52 3.02
145 146 3.213506 CCACAAACCACACTGATTCAGA 58.786 45.455 20.33 0.00 35.18 3.27
146 147 3.003689 CCACAAACCACACTGATTCAGAC 59.996 47.826 20.33 0.00 35.18 3.51
147 148 3.627123 CACAAACCACACTGATTCAGACA 59.373 43.478 20.33 0.00 35.18 3.41
148 149 4.276678 CACAAACCACACTGATTCAGACAT 59.723 41.667 20.33 2.31 35.18 3.06
149 150 5.469760 CACAAACCACACTGATTCAGACATA 59.530 40.000 20.33 0.00 35.18 2.29
150 151 6.149973 CACAAACCACACTGATTCAGACATAT 59.850 38.462 20.33 0.24 35.18 1.78
151 152 6.716628 ACAAACCACACTGATTCAGACATATT 59.283 34.615 20.33 6.13 35.18 1.28
152 153 6.992063 AACCACACTGATTCAGACATATTC 57.008 37.500 20.33 0.00 35.18 1.75
153 154 6.053632 ACCACACTGATTCAGACATATTCA 57.946 37.500 20.33 0.00 35.18 2.57
154 155 6.111382 ACCACACTGATTCAGACATATTCAG 58.889 40.000 20.33 0.00 39.70 3.02
155 156 5.007430 CCACACTGATTCAGACATATTCAGC 59.993 44.000 20.33 0.00 37.84 4.26
156 157 5.007430 CACACTGATTCAGACATATTCAGCC 59.993 44.000 20.33 0.00 37.84 4.85
157 158 5.121105 CACTGATTCAGACATATTCAGCCA 58.879 41.667 20.33 0.00 37.84 4.75
158 159 5.236695 CACTGATTCAGACATATTCAGCCAG 59.763 44.000 20.33 0.00 37.84 4.85
159 160 4.711399 TGATTCAGACATATTCAGCCAGG 58.289 43.478 0.00 0.00 0.00 4.45
160 161 2.627515 TCAGACATATTCAGCCAGGC 57.372 50.000 1.84 1.84 0.00 4.85
161 162 1.141657 TCAGACATATTCAGCCAGGCC 59.858 52.381 8.22 0.00 0.00 5.19
162 163 1.134007 CAGACATATTCAGCCAGGCCA 60.134 52.381 8.22 0.00 0.00 5.36
163 164 1.565759 AGACATATTCAGCCAGGCCAA 59.434 47.619 8.22 1.06 0.00 4.52
164 165 1.952296 GACATATTCAGCCAGGCCAAG 59.048 52.381 8.22 0.00 0.00 3.61
165 166 0.672342 CATATTCAGCCAGGCCAAGC 59.328 55.000 8.22 7.33 0.00 4.01
166 167 0.820891 ATATTCAGCCAGGCCAAGCG 60.821 55.000 8.22 4.07 0.00 4.68
167 168 1.909459 TATTCAGCCAGGCCAAGCGA 61.909 55.000 8.22 6.49 0.00 4.93
168 169 2.769652 ATTCAGCCAGGCCAAGCGAA 62.770 55.000 8.22 18.79 0.00 4.70
169 170 3.437795 CAGCCAGGCCAAGCGAAG 61.438 66.667 8.22 0.00 0.00 3.79
170 171 3.640407 AGCCAGGCCAAGCGAAGA 61.640 61.111 8.22 0.00 0.00 2.87
171 172 2.672996 GCCAGGCCAAGCGAAGAA 60.673 61.111 5.01 0.00 0.00 2.52
172 173 2.694760 GCCAGGCCAAGCGAAGAAG 61.695 63.158 5.01 0.00 0.00 2.85
173 174 2.042831 CCAGGCCAAGCGAAGAAGG 61.043 63.158 5.01 0.00 0.00 3.46
174 175 1.302832 CAGGCCAAGCGAAGAAGGT 60.303 57.895 5.01 0.00 0.00 3.50
175 176 1.003233 AGGCCAAGCGAAGAAGGTC 60.003 57.895 5.01 0.00 0.00 3.85
176 177 2.391389 GGCCAAGCGAAGAAGGTCG 61.391 63.158 0.00 0.00 43.98 4.79
186 187 4.610400 CGAAGAAGGTCGCGATTTATAC 57.390 45.455 14.06 0.00 33.66 1.47
187 188 4.039703 CGAAGAAGGTCGCGATTTATACA 58.960 43.478 14.06 0.00 33.66 2.29
188 189 4.501559 CGAAGAAGGTCGCGATTTATACAA 59.498 41.667 14.06 0.00 33.66 2.41
189 190 5.005012 CGAAGAAGGTCGCGATTTATACAAA 59.995 40.000 14.06 0.00 33.66 2.83
190 191 5.713822 AGAAGGTCGCGATTTATACAAAC 57.286 39.130 14.06 0.00 0.00 2.93
191 192 4.266976 AGAAGGTCGCGATTTATACAAACG 59.733 41.667 14.06 0.00 0.00 3.60
192 193 3.514645 AGGTCGCGATTTATACAAACGT 58.485 40.909 14.06 0.00 0.00 3.99
193 194 3.549070 AGGTCGCGATTTATACAAACGTC 59.451 43.478 14.06 0.00 0.00 4.34
194 195 3.304026 GGTCGCGATTTATACAAACGTCA 59.696 43.478 14.06 0.00 0.00 4.35
195 196 4.201608 GGTCGCGATTTATACAAACGTCAA 60.202 41.667 14.06 0.00 0.00 3.18
196 197 5.486706 GTCGCGATTTATACAAACGTCAAT 58.513 37.500 14.06 0.00 0.00 2.57
197 198 5.388573 GTCGCGATTTATACAAACGTCAATG 59.611 40.000 14.06 0.00 0.00 2.82
198 199 4.664410 CGCGATTTATACAAACGTCAATGG 59.336 41.667 0.00 0.00 0.00 3.16
199 200 4.436523 GCGATTTATACAAACGTCAATGGC 59.563 41.667 0.00 0.00 0.00 4.40
200 201 4.664410 CGATTTATACAAACGTCAATGGCG 59.336 41.667 5.42 5.42 0.00 5.69
201 202 5.501092 CGATTTATACAAACGTCAATGGCGA 60.501 40.000 16.16 0.00 0.00 5.54
202 203 5.608676 TTTATACAAACGTCAATGGCGAA 57.391 34.783 16.16 0.00 0.00 4.70
203 204 3.740044 ATACAAACGTCAATGGCGAAG 57.260 42.857 16.16 5.51 0.00 3.79
216 217 3.945436 CGAAGCCACGCTAACACA 58.055 55.556 0.00 0.00 38.25 3.72
217 218 2.456000 CGAAGCCACGCTAACACAT 58.544 52.632 0.00 0.00 38.25 3.21
218 219 0.796312 CGAAGCCACGCTAACACATT 59.204 50.000 0.00 0.00 38.25 2.71
219 220 1.996898 CGAAGCCACGCTAACACATTA 59.003 47.619 0.00 0.00 38.25 1.90
220 221 2.029244 CGAAGCCACGCTAACACATTAG 59.971 50.000 0.00 0.00 38.25 1.73
221 222 2.762535 AGCCACGCTAACACATTAGT 57.237 45.000 0.00 0.00 40.13 2.24
222 223 3.880047 AGCCACGCTAACACATTAGTA 57.120 42.857 0.00 0.00 40.13 1.82
223 224 3.518590 AGCCACGCTAACACATTAGTAC 58.481 45.455 0.00 0.00 40.13 2.73
224 225 2.606272 GCCACGCTAACACATTAGTACC 59.394 50.000 0.00 0.00 40.13 3.34
225 226 3.677976 GCCACGCTAACACATTAGTACCT 60.678 47.826 0.00 0.00 40.13 3.08
226 227 4.440525 GCCACGCTAACACATTAGTACCTA 60.441 45.833 0.00 0.00 40.13 3.08
227 228 5.653507 CCACGCTAACACATTAGTACCTAA 58.346 41.667 0.00 0.00 40.13 2.69
228 229 6.101332 CCACGCTAACACATTAGTACCTAAA 58.899 40.000 0.00 0.00 40.13 1.85
229 230 6.759827 CCACGCTAACACATTAGTACCTAAAT 59.240 38.462 0.00 0.00 40.13 1.40
230 231 7.922278 CCACGCTAACACATTAGTACCTAAATA 59.078 37.037 0.00 0.00 40.13 1.40
231 232 9.472361 CACGCTAACACATTAGTACCTAAATAT 57.528 33.333 0.00 0.00 40.13 1.28
245 246 8.376270 AGTACCTAAATATAATCAGAAGCACCC 58.624 37.037 0.00 0.00 0.00 4.61
246 247 7.149202 ACCTAAATATAATCAGAAGCACCCA 57.851 36.000 0.00 0.00 0.00 4.51
247 248 7.759607 ACCTAAATATAATCAGAAGCACCCAT 58.240 34.615 0.00 0.00 0.00 4.00
248 249 8.890472 ACCTAAATATAATCAGAAGCACCCATA 58.110 33.333 0.00 0.00 0.00 2.74
249 250 9.911788 CCTAAATATAATCAGAAGCACCCATAT 57.088 33.333 0.00 0.00 0.00 1.78
255 256 6.889301 AATCAGAAGCACCCATATATGTTG 57.111 37.500 11.73 9.12 0.00 3.33
256 257 5.372343 TCAGAAGCACCCATATATGTTGT 57.628 39.130 11.73 5.75 0.00 3.32
257 258 5.754782 TCAGAAGCACCCATATATGTTGTT 58.245 37.500 11.73 3.94 0.00 2.83
258 259 5.822519 TCAGAAGCACCCATATATGTTGTTC 59.177 40.000 11.73 12.39 0.00 3.18
259 260 5.824624 CAGAAGCACCCATATATGTTGTTCT 59.175 40.000 11.73 13.88 0.00 3.01
260 261 6.319658 CAGAAGCACCCATATATGTTGTTCTT 59.680 38.462 11.73 12.77 0.00 2.52
261 262 7.498900 CAGAAGCACCCATATATGTTGTTCTTA 59.501 37.037 11.73 0.00 0.00 2.10
262 263 7.499232 AGAAGCACCCATATATGTTGTTCTTAC 59.501 37.037 11.73 8.30 0.00 2.34
263 264 5.758296 AGCACCCATATATGTTGTTCTTACG 59.242 40.000 11.73 0.00 0.00 3.18
264 265 5.526111 GCACCCATATATGTTGTTCTTACGT 59.474 40.000 11.73 0.00 0.00 3.57
265 266 6.702723 GCACCCATATATGTTGTTCTTACGTA 59.297 38.462 11.73 0.00 0.00 3.57
266 267 7.306983 GCACCCATATATGTTGTTCTTACGTAC 60.307 40.741 11.73 0.00 0.00 3.67
267 268 7.924412 CACCCATATATGTTGTTCTTACGTACT 59.076 37.037 11.73 0.00 0.00 2.73
268 269 8.480501 ACCCATATATGTTGTTCTTACGTACTT 58.519 33.333 11.73 0.00 0.00 2.24
269 270 8.975439 CCCATATATGTTGTTCTTACGTACTTC 58.025 37.037 11.73 0.00 0.00 3.01
270 271 9.524106 CCATATATGTTGTTCTTACGTACTTCA 57.476 33.333 11.73 0.00 0.00 3.02
273 274 6.721571 ATGTTGTTCTTACGTACTTCATGG 57.278 37.500 0.00 0.00 0.00 3.66
274 275 4.992319 TGTTGTTCTTACGTACTTCATGGG 59.008 41.667 0.00 0.00 0.00 4.00
275 276 5.221481 TGTTGTTCTTACGTACTTCATGGGA 60.221 40.000 0.00 0.00 0.00 4.37
276 277 5.068234 TGTTCTTACGTACTTCATGGGAG 57.932 43.478 0.00 0.00 0.00 4.30
277 278 3.795623 TCTTACGTACTTCATGGGAGC 57.204 47.619 0.00 0.00 0.00 4.70
278 279 2.098607 TCTTACGTACTTCATGGGAGCG 59.901 50.000 0.00 0.00 0.00 5.03
279 280 0.742505 TACGTACTTCATGGGAGCGG 59.257 55.000 0.00 0.00 0.00 5.52
280 281 1.883084 CGTACTTCATGGGAGCGGC 60.883 63.158 0.00 0.00 0.00 6.53
281 282 1.220749 GTACTTCATGGGAGCGGCA 59.779 57.895 1.45 0.00 0.00 5.69
282 283 1.090052 GTACTTCATGGGAGCGGCAC 61.090 60.000 1.45 0.00 0.00 5.01
283 284 2.252072 TACTTCATGGGAGCGGCACC 62.252 60.000 8.03 8.03 0.00 5.01
284 285 3.329889 TTCATGGGAGCGGCACCT 61.330 61.111 16.03 0.00 0.00 4.00
285 286 3.626996 TTCATGGGAGCGGCACCTG 62.627 63.158 16.03 7.78 0.00 4.00
296 297 4.603535 GCACCTGCCACCCCAAGT 62.604 66.667 0.00 0.00 34.31 3.16
297 298 2.598394 CACCTGCCACCCCAAGTG 60.598 66.667 0.00 0.00 46.83 3.16
298 299 3.103213 ACCTGCCACCCCAAGTGT 61.103 61.111 0.00 0.00 45.74 3.55
299 300 2.282462 CCTGCCACCCCAAGTGTC 60.282 66.667 0.00 0.00 45.74 3.67
300 301 2.833913 CCTGCCACCCCAAGTGTCT 61.834 63.158 0.00 0.00 45.74 3.41
301 302 1.601759 CTGCCACCCCAAGTGTCTG 60.602 63.158 0.00 0.00 45.74 3.51
302 303 2.985847 GCCACCCCAAGTGTCTGC 60.986 66.667 0.00 0.00 45.74 4.26
303 304 2.839098 CCACCCCAAGTGTCTGCT 59.161 61.111 0.00 0.00 45.74 4.24
304 305 1.302832 CCACCCCAAGTGTCTGCTC 60.303 63.158 0.00 0.00 45.74 4.26
305 306 1.302832 CACCCCAAGTGTCTGCTCC 60.303 63.158 0.00 0.00 41.93 4.70
306 307 1.770110 ACCCCAAGTGTCTGCTCCA 60.770 57.895 0.00 0.00 0.00 3.86
307 308 1.002868 CCCCAAGTGTCTGCTCCAG 60.003 63.158 0.00 0.00 0.00 3.86
308 309 1.483595 CCCCAAGTGTCTGCTCCAGA 61.484 60.000 0.00 0.00 38.25 3.86
320 321 3.473147 CTCCAGACAAGAGCCCATG 57.527 57.895 0.00 0.00 0.00 3.66
321 322 0.107312 CTCCAGACAAGAGCCCATGG 60.107 60.000 4.14 4.14 0.00 3.66
322 323 0.842030 TCCAGACAAGAGCCCATGGT 60.842 55.000 11.73 0.00 0.00 3.55
323 324 0.038744 CCAGACAAGAGCCCATGGTT 59.961 55.000 11.73 0.00 0.00 3.67
324 325 1.548582 CCAGACAAGAGCCCATGGTTT 60.549 52.381 11.73 0.00 0.00 3.27
325 326 2.290896 CCAGACAAGAGCCCATGGTTTA 60.291 50.000 11.73 0.00 0.00 2.01
326 327 2.749621 CAGACAAGAGCCCATGGTTTAC 59.250 50.000 11.73 0.00 0.00 2.01
327 328 2.644798 AGACAAGAGCCCATGGTTTACT 59.355 45.455 11.73 2.03 0.00 2.24
328 329 3.074538 AGACAAGAGCCCATGGTTTACTT 59.925 43.478 11.73 7.82 0.00 2.24
329 330 4.288626 AGACAAGAGCCCATGGTTTACTTA 59.711 41.667 11.73 0.00 0.00 2.24
330 331 5.044846 AGACAAGAGCCCATGGTTTACTTAT 60.045 40.000 11.73 0.00 0.00 1.73
331 332 6.157994 AGACAAGAGCCCATGGTTTACTTATA 59.842 38.462 11.73 0.00 0.00 0.98
332 333 6.911308 ACAAGAGCCCATGGTTTACTTATAT 58.089 36.000 11.73 0.00 0.00 0.86
333 334 8.041143 ACAAGAGCCCATGGTTTACTTATATA 57.959 34.615 11.73 0.00 0.00 0.86
334 335 7.937394 ACAAGAGCCCATGGTTTACTTATATAC 59.063 37.037 11.73 0.00 0.00 1.47
335 336 7.873699 AGAGCCCATGGTTTACTTATATACT 57.126 36.000 11.73 0.00 0.00 2.12
336 337 8.967779 AGAGCCCATGGTTTACTTATATACTA 57.032 34.615 11.73 0.00 0.00 1.82
337 338 9.036980 AGAGCCCATGGTTTACTTATATACTAG 57.963 37.037 11.73 0.00 0.00 2.57
338 339 8.967779 AGCCCATGGTTTACTTATATACTAGA 57.032 34.615 11.73 0.00 0.00 2.43
339 340 9.036980 AGCCCATGGTTTACTTATATACTAGAG 57.963 37.037 11.73 0.00 0.00 2.43
340 341 7.764901 GCCCATGGTTTACTTATATACTAGAGC 59.235 40.741 11.73 0.00 0.00 4.09
341 342 8.258708 CCCATGGTTTACTTATATACTAGAGCC 58.741 40.741 11.73 0.00 0.00 4.70
342 343 8.812972 CCATGGTTTACTTATATACTAGAGCCA 58.187 37.037 2.57 0.00 0.00 4.75
343 344 9.640963 CATGGTTTACTTATATACTAGAGCCAC 57.359 37.037 0.00 0.00 0.00 5.01
344 345 7.879070 TGGTTTACTTATATACTAGAGCCACG 58.121 38.462 0.00 0.00 0.00 4.94
345 346 7.040201 TGGTTTACTTATATACTAGAGCCACGG 60.040 40.741 0.00 0.00 0.00 4.94
346 347 7.040132 GGTTTACTTATATACTAGAGCCACGGT 60.040 40.741 0.00 0.00 0.00 4.83
347 348 5.961396 ACTTATATACTAGAGCCACGGTG 57.039 43.478 0.00 0.00 0.00 4.94
348 349 5.383476 ACTTATATACTAGAGCCACGGTGT 58.617 41.667 7.45 0.00 0.00 4.16
349 350 5.472820 ACTTATATACTAGAGCCACGGTGTC 59.527 44.000 7.45 0.00 0.00 3.67
350 351 2.139323 ATACTAGAGCCACGGTGTCA 57.861 50.000 7.45 0.00 0.00 3.58
351 352 2.139323 TACTAGAGCCACGGTGTCAT 57.861 50.000 7.45 0.00 0.00 3.06
352 353 1.267121 ACTAGAGCCACGGTGTCATT 58.733 50.000 7.45 0.00 0.00 2.57
353 354 1.204941 ACTAGAGCCACGGTGTCATTC 59.795 52.381 7.45 0.00 0.00 2.67
354 355 1.204704 CTAGAGCCACGGTGTCATTCA 59.795 52.381 7.45 0.00 0.00 2.57
355 356 0.396435 AGAGCCACGGTGTCATTCAA 59.604 50.000 7.45 0.00 0.00 2.69
356 357 1.202758 AGAGCCACGGTGTCATTCAAA 60.203 47.619 7.45 0.00 0.00 2.69
357 358 1.812571 GAGCCACGGTGTCATTCAAAT 59.187 47.619 7.45 0.00 0.00 2.32
358 359 2.228822 GAGCCACGGTGTCATTCAAATT 59.771 45.455 7.45 0.00 0.00 1.82
359 360 2.228822 AGCCACGGTGTCATTCAAATTC 59.771 45.455 7.45 0.00 0.00 2.17
360 361 2.030363 GCCACGGTGTCATTCAAATTCA 60.030 45.455 7.45 0.00 0.00 2.57
361 362 3.825308 CCACGGTGTCATTCAAATTCAG 58.175 45.455 7.45 0.00 0.00 3.02
362 363 3.253188 CCACGGTGTCATTCAAATTCAGT 59.747 43.478 7.45 0.00 0.00 3.41
363 364 4.261572 CCACGGTGTCATTCAAATTCAGTT 60.262 41.667 7.45 0.00 0.00 3.16
364 365 4.911610 CACGGTGTCATTCAAATTCAGTTC 59.088 41.667 0.00 0.00 0.00 3.01
365 366 4.821805 ACGGTGTCATTCAAATTCAGTTCT 59.178 37.500 0.00 0.00 0.00 3.01
366 367 5.299279 ACGGTGTCATTCAAATTCAGTTCTT 59.701 36.000 0.00 0.00 0.00 2.52
367 368 5.853282 CGGTGTCATTCAAATTCAGTTCTTC 59.147 40.000 0.00 0.00 0.00 2.87
368 369 6.513230 CGGTGTCATTCAAATTCAGTTCTTCA 60.513 38.462 0.00 0.00 0.00 3.02
369 370 7.373493 GGTGTCATTCAAATTCAGTTCTTCAT 58.627 34.615 0.00 0.00 0.00 2.57
370 371 8.514594 GGTGTCATTCAAATTCAGTTCTTCATA 58.485 33.333 0.00 0.00 0.00 2.15
371 372 9.334693 GTGTCATTCAAATTCAGTTCTTCATAC 57.665 33.333 0.00 0.00 0.00 2.39
372 373 9.288576 TGTCATTCAAATTCAGTTCTTCATACT 57.711 29.630 0.00 0.00 0.00 2.12
412 413 5.324409 TCCAGATTGGCTGTTTAGAACAAT 58.676 37.500 0.00 0.00 43.33 2.71
413 414 5.415701 TCCAGATTGGCTGTTTAGAACAATC 59.584 40.000 0.00 0.00 43.11 2.67
415 416 6.404074 CCAGATTGGCTGTTTAGAACAATCTC 60.404 42.308 13.46 0.00 46.06 2.75
416 417 6.373774 CAGATTGGCTGTTTAGAACAATCTCT 59.626 38.462 13.46 0.00 46.06 3.10
450 451 5.437289 TGTATGCTTGTTTCTTTGACCTG 57.563 39.130 0.00 0.00 0.00 4.00
457 458 5.637387 GCTTGTTTCTTTGACCTGAACAAAA 59.363 36.000 0.00 0.00 36.91 2.44
482 483 7.680442 AACCATTTTTGCAATACCAATTACC 57.320 32.000 0.00 0.00 0.00 2.85
505 506 8.831715 ACCTTTGGCAAGTTTATTCTAAAATG 57.168 30.769 0.00 0.00 0.00 2.32
506 507 8.428852 ACCTTTGGCAAGTTTATTCTAAAATGT 58.571 29.630 0.00 0.00 0.00 2.71
511 512 9.823647 TGGCAAGTTTATTCTAAAATGTTTTCA 57.176 25.926 0.00 0.00 0.00 2.69
534 535 8.650143 TCATTTTCTTAGTTAGCCATTTTCCT 57.350 30.769 0.00 0.00 0.00 3.36
549 550 5.991606 CCATTTTCCTCCTTTTTGTCCTTTC 59.008 40.000 0.00 0.00 0.00 2.62
550 551 6.183361 CCATTTTCCTCCTTTTTGTCCTTTCT 60.183 38.462 0.00 0.00 0.00 2.52
551 552 6.867519 TTTTCCTCCTTTTTGTCCTTTCTT 57.132 33.333 0.00 0.00 0.00 2.52
552 553 6.465439 TTTCCTCCTTTTTGTCCTTTCTTC 57.535 37.500 0.00 0.00 0.00 2.87
553 554 5.388599 TCCTCCTTTTTGTCCTTTCTTCT 57.611 39.130 0.00 0.00 0.00 2.85
554 555 5.133221 TCCTCCTTTTTGTCCTTTCTTCTG 58.867 41.667 0.00 0.00 0.00 3.02
555 556 4.889995 CCTCCTTTTTGTCCTTTCTTCTGT 59.110 41.667 0.00 0.00 0.00 3.41
571 572 2.111878 GTGGACACAGTGCCTGCT 59.888 61.111 13.25 0.00 34.37 4.24
578 579 2.813754 GACACAGTGCCTGCTAATGAAA 59.186 45.455 0.00 0.00 34.37 2.69
579 580 2.816087 ACACAGTGCCTGCTAATGAAAG 59.184 45.455 0.00 0.00 34.37 2.62
580 581 2.163010 CACAGTGCCTGCTAATGAAAGG 59.837 50.000 2.50 0.00 34.37 3.11
587 588 2.424956 CCTGCTAATGAAAGGCCTGAAC 59.575 50.000 5.69 0.88 0.00 3.18
612 613 1.549950 GCTCTAGGAGGCTAGGAGCAT 60.550 57.143 18.73 0.00 44.75 3.79
616 702 1.127343 AGGAGGCTAGGAGCATGAAC 58.873 55.000 0.00 0.00 44.75 3.18
625 711 4.823989 GCTAGGAGCATGAACATATTGGTT 59.176 41.667 0.00 0.00 41.89 3.67
626 712 5.049129 GCTAGGAGCATGAACATATTGGTTC 60.049 44.000 0.00 0.00 43.01 3.62
632 718 7.308229 GGAGCATGAACATATTGGTTCTGATAC 60.308 40.741 0.00 0.62 45.74 2.24
633 719 7.056006 AGCATGAACATATTGGTTCTGATACA 58.944 34.615 0.00 0.00 45.74 2.29
635 721 7.227314 GCATGAACATATTGGTTCTGATACAGA 59.773 37.037 0.00 0.00 45.74 3.41
639 725 6.349300 ACATATTGGTTCTGATACAGACCAC 58.651 40.000 16.35 8.12 40.46 4.16
644 730 4.338400 TGGTTCTGATACAGACCACTATCG 59.662 45.833 14.22 0.00 40.46 2.92
654 740 4.177026 CAGACCACTATCGGAGTTGAAAG 58.823 47.826 0.00 0.00 35.64 2.62
655 741 3.833070 AGACCACTATCGGAGTTGAAAGT 59.167 43.478 0.00 0.00 35.64 2.66
669 755 9.685005 CGGAGTTGAAAGTTATTTATAGTTTCG 57.315 33.333 0.00 0.00 31.10 3.46
689 776 1.591619 GAGTTAAGATTACGCGTGCCC 59.408 52.381 24.59 10.27 0.00 5.36
700 787 1.675641 GCGTGCCCTGACTTCCAAT 60.676 57.895 0.00 0.00 0.00 3.16
724 811 3.879295 GTCACCCTGATAATGACACATGG 59.121 47.826 0.00 0.00 41.94 3.66
726 813 4.413189 TCACCCTGATAATGACACATGGAT 59.587 41.667 0.00 0.00 0.00 3.41
744 831 4.383173 TGGATACATCATGCAGCTTGTAG 58.617 43.478 8.09 5.03 46.17 2.74
751 838 3.076621 TCATGCAGCTTGTAGTTTCCTG 58.923 45.455 8.09 0.00 0.00 3.86
752 839 2.638480 TGCAGCTTGTAGTTTCCTGT 57.362 45.000 0.00 0.00 0.00 4.00
754 841 2.618241 TGCAGCTTGTAGTTTCCTGTTG 59.382 45.455 0.00 0.00 0.00 3.33
760 847 4.275936 GCTTGTAGTTTCCTGTTGTCATGT 59.724 41.667 0.00 0.00 0.00 3.21
784 871 8.685427 TGTGGACTATAAAAATACTACGTAGCA 58.315 33.333 22.40 10.54 0.00 3.49
797 884 5.317808 ACTACGTAGCATGTATCATCTCCT 58.682 41.667 22.40 0.00 0.00 3.69
801 888 6.448006 ACGTAGCATGTATCATCTCCTTAAC 58.552 40.000 0.00 0.00 0.00 2.01
804 891 5.862845 AGCATGTATCATCTCCTTAACCTG 58.137 41.667 0.00 0.00 0.00 4.00
811 898 5.407407 TCATCTCCTTAACCTGAACTGAC 57.593 43.478 0.00 0.00 0.00 3.51
870 975 1.255667 ACTGTAATGGACGGACGGCT 61.256 55.000 0.00 0.00 37.90 5.52
901 1006 3.580731 GCTCGTTGAGAGGCTTATATCC 58.419 50.000 0.00 0.00 46.91 2.59
902 1007 3.257127 GCTCGTTGAGAGGCTTATATCCT 59.743 47.826 0.00 0.00 46.91 3.24
908 1013 2.003196 GAGGCTTATATCCTCTGCGC 57.997 55.000 0.00 0.00 45.13 6.09
909 1014 0.610687 AGGCTTATATCCTCTGCGCC 59.389 55.000 4.18 0.00 36.36 6.53
910 1015 0.737715 GGCTTATATCCTCTGCGCCG 60.738 60.000 4.18 0.00 0.00 6.46
911 1016 0.737715 GCTTATATCCTCTGCGCCGG 60.738 60.000 4.18 0.00 0.00 6.13
912 1017 0.888619 CTTATATCCTCTGCGCCGGA 59.111 55.000 5.05 8.97 0.00 5.14
913 1018 1.478510 CTTATATCCTCTGCGCCGGAT 59.521 52.381 21.58 21.58 42.46 4.18
914 1019 0.817654 TATATCCTCTGCGCCGGATG 59.182 55.000 24.68 12.72 40.17 3.51
915 1020 1.892819 ATATCCTCTGCGCCGGATGG 61.893 60.000 24.68 16.29 40.17 3.51
916 1021 2.994643 TATCCTCTGCGCCGGATGGA 62.995 60.000 24.68 19.59 40.17 3.41
917 1022 4.899239 CCTCTGCGCCGGATGGAC 62.899 72.222 5.05 0.00 37.49 4.02
926 1031 3.445687 CGGATGGACGGACGACCA 61.446 66.667 17.19 17.19 43.27 4.02
927 1032 2.183555 GGATGGACGGACGACCAC 59.816 66.667 17.21 11.29 42.09 4.16
928 1033 2.183555 GATGGACGGACGACCACC 59.816 66.667 17.21 4.90 42.09 4.61
929 1034 2.283676 ATGGACGGACGACCACCT 60.284 61.111 17.21 1.05 42.09 4.00
930 1035 1.000521 ATGGACGGACGACCACCTA 60.001 57.895 17.21 0.00 42.09 3.08
931 1036 0.396695 ATGGACGGACGACCACCTAT 60.397 55.000 17.21 0.00 42.09 2.57
932 1037 1.033746 TGGACGGACGACCACCTATC 61.034 60.000 11.58 1.18 35.24 2.08
933 1038 1.732308 GACGGACGACCACCTATCC 59.268 63.158 4.48 0.00 35.59 2.59
934 1039 0.750911 GACGGACGACCACCTATCCT 60.751 60.000 4.48 0.00 35.59 3.24
935 1040 0.750911 ACGGACGACCACCTATCCTC 60.751 60.000 4.48 0.00 35.59 3.71
936 1041 0.465824 CGGACGACCACCTATCCTCT 60.466 60.000 4.48 0.00 35.59 3.69
937 1042 1.033574 GGACGACCACCTATCCTCTG 58.966 60.000 0.00 0.00 35.97 3.35
938 1043 0.386113 GACGACCACCTATCCTCTGC 59.614 60.000 0.00 0.00 0.00 4.26
939 1044 0.033011 ACGACCACCTATCCTCTGCT 60.033 55.000 0.00 0.00 0.00 4.24
940 1045 0.671251 CGACCACCTATCCTCTGCTC 59.329 60.000 0.00 0.00 0.00 4.26
941 1046 1.781786 GACCACCTATCCTCTGCTCA 58.218 55.000 0.00 0.00 0.00 4.26
942 1047 2.324541 GACCACCTATCCTCTGCTCAT 58.675 52.381 0.00 0.00 0.00 2.90
943 1048 2.298729 GACCACCTATCCTCTGCTCATC 59.701 54.545 0.00 0.00 0.00 2.92
944 1049 2.090831 ACCACCTATCCTCTGCTCATCT 60.091 50.000 0.00 0.00 0.00 2.90
945 1050 2.562298 CCACCTATCCTCTGCTCATCTC 59.438 54.545 0.00 0.00 0.00 2.75
946 1051 2.562298 CACCTATCCTCTGCTCATCTCC 59.438 54.545 0.00 0.00 0.00 3.71
958 1063 5.951148 TCTGCTCATCTCCTTATATCCTCTG 59.049 44.000 0.00 0.00 0.00 3.35
959 1064 4.465660 TGCTCATCTCCTTATATCCTCTGC 59.534 45.833 0.00 0.00 0.00 4.26
960 1065 4.439974 GCTCATCTCCTTATATCCTCTGCG 60.440 50.000 0.00 0.00 0.00 5.18
961 1066 3.445450 TCATCTCCTTATATCCTCTGCGC 59.555 47.826 0.00 0.00 0.00 6.09
981 1089 2.113986 GGCAGTGAAGCACCACCT 59.886 61.111 0.00 0.00 37.76 4.00
989 1097 1.207089 TGAAGCACCACCTATCCGAAG 59.793 52.381 0.00 0.00 0.00 3.79
1052 1169 4.575645 CCTACTCTCTTACACTTACCTCCG 59.424 50.000 0.00 0.00 0.00 4.63
1165 1282 0.541392 CCTTGGGTCATGGTCGATGA 59.459 55.000 0.00 0.00 38.87 2.92
1290 1410 1.517475 GCTCGACTTCTCGGCCTTC 60.517 63.158 0.00 0.00 40.58 3.46
1292 1412 1.304217 TCGACTTCTCGGCCTTCCT 60.304 57.895 0.00 0.00 40.58 3.36
1293 1413 0.034767 TCGACTTCTCGGCCTTCCTA 60.035 55.000 0.00 0.00 40.58 2.94
1303 1423 0.393132 GGCCTTCCTACACCTGAAGC 60.393 60.000 0.00 0.00 37.29 3.86
1311 1431 2.037772 CCTACACCTGAAGCAACTCACT 59.962 50.000 0.00 0.00 0.00 3.41
1345 1465 9.930468 AGAATGGTCTACATGGCACAATTCCAT 62.930 40.741 13.52 0.00 40.44 3.41
1390 1510 1.066215 TGGTCGTGTTGGAGATCATGG 60.066 52.381 0.00 0.00 0.00 3.66
1397 1517 1.211457 GTTGGAGATCATGGGCAGTCT 59.789 52.381 0.00 0.00 0.00 3.24
1399 1519 1.126488 GGAGATCATGGGCAGTCTGA 58.874 55.000 3.32 0.00 0.00 3.27
1530 1650 1.272781 CGAAGTTGGAGATGCTCGAC 58.727 55.000 0.00 0.00 0.00 4.20
1550 1673 2.038557 ACCTGCACTCCGTTACTTTGAT 59.961 45.455 0.00 0.00 0.00 2.57
1605 1728 4.026300 CTCCGGGAGCTGAGACTT 57.974 61.111 11.83 0.00 0.00 3.01
1745 1868 6.152932 TCTGGTAAAACTCCGGTATATGAC 57.847 41.667 0.00 0.00 33.44 3.06
1840 1972 1.334869 CACACAACAACTTCTCTGGGC 59.665 52.381 0.00 0.00 0.00 5.36
2167 2305 3.202151 AGGTCTTTCCAAGTGTTTCTGGA 59.798 43.478 0.00 0.00 39.02 3.86
2169 2307 4.401202 GGTCTTTCCAAGTGTTTCTGGAAA 59.599 41.667 13.93 13.93 45.00 3.13
2199 2337 3.726557 TTGCAATTCCTGGATCTGTCT 57.273 42.857 0.00 0.00 0.00 3.41
2234 2372 1.267806 TGGTGTAGTTCCGTTCTCGAC 59.732 52.381 0.00 0.00 39.71 4.20
2688 2830 2.417339 TCGACTTGTCTGGAAACTCG 57.583 50.000 0.00 0.00 0.00 4.18
2989 3133 4.141287 CAATAATCTTGGGTTATGCGGGA 58.859 43.478 0.00 0.00 0.00 5.14
2990 7229 2.818751 AATCTTGGGTTATGCGGGAA 57.181 45.000 0.00 0.00 0.00 3.97
3123 7365 1.844497 GGGTTCTGGCTATACTTGGGT 59.156 52.381 0.00 0.00 0.00 4.51
3222 7467 3.562973 AGATACGAAGCTGCATTTCATGG 59.437 43.478 1.02 0.00 0.00 3.66
3599 8378 1.944709 GTTTTAGCTCCCAACACACGT 59.055 47.619 0.00 0.00 0.00 4.49
3702 9914 5.011586 TCATCAATCTGATCAACCAAAGCA 58.988 37.500 0.00 0.00 34.28 3.91
3704 9916 4.654915 TCAATCTGATCAACCAAAGCAGA 58.345 39.130 0.00 0.00 39.61 4.26
3705 9917 5.072055 TCAATCTGATCAACCAAAGCAGAA 58.928 37.500 0.00 0.00 38.87 3.02
3706 9918 5.713389 TCAATCTGATCAACCAAAGCAGAAT 59.287 36.000 0.00 0.00 38.87 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.483876 CAGTGTGGGTACTGTCACTTG 58.516 52.381 12.11 8.66 42.38 3.16
2 3 2.910688 CAGTGTGGGTACTGTCACTT 57.089 50.000 12.11 2.51 42.38 3.16
9 10 3.199071 TGTTGAGAAACAGTGTGGGTACT 59.801 43.478 0.00 0.00 0.00 2.73
10 11 3.537580 TGTTGAGAAACAGTGTGGGTAC 58.462 45.455 0.00 0.00 0.00 3.34
11 12 3.916359 TGTTGAGAAACAGTGTGGGTA 57.084 42.857 0.00 0.00 0.00 3.69
12 13 2.799126 TGTTGAGAAACAGTGTGGGT 57.201 45.000 0.00 0.00 0.00 4.51
13 14 2.951642 ACATGTTGAGAAACAGTGTGGG 59.048 45.455 0.00 0.00 35.95 4.61
14 15 3.243168 CCACATGTTGAGAAACAGTGTGG 60.243 47.826 23.24 23.24 44.96 4.17
15 16 3.243168 CCCACATGTTGAGAAACAGTGTG 60.243 47.826 17.62 17.62 39.30 3.82
16 17 2.951642 CCCACATGTTGAGAAACAGTGT 59.048 45.455 0.00 0.00 35.95 3.55
17 18 2.951642 ACCCACATGTTGAGAAACAGTG 59.048 45.455 0.00 11.14 35.95 3.66
18 19 3.297134 ACCCACATGTTGAGAAACAGT 57.703 42.857 0.00 0.00 35.95 3.55
19 20 3.885297 AGAACCCACATGTTGAGAAACAG 59.115 43.478 0.00 0.00 35.95 3.16
20 21 3.882888 GAGAACCCACATGTTGAGAAACA 59.117 43.478 0.00 0.00 37.05 2.83
21 22 4.137543 AGAGAACCCACATGTTGAGAAAC 58.862 43.478 0.00 0.00 0.00 2.78
22 23 4.437682 AGAGAACCCACATGTTGAGAAA 57.562 40.909 0.00 0.00 0.00 2.52
23 24 5.560722 TTAGAGAACCCACATGTTGAGAA 57.439 39.130 0.00 0.00 0.00 2.87
24 25 5.248248 TCATTAGAGAACCCACATGTTGAGA 59.752 40.000 0.00 0.00 0.00 3.27
25 26 5.352569 GTCATTAGAGAACCCACATGTTGAG 59.647 44.000 0.00 0.00 0.00 3.02
26 27 5.245531 GTCATTAGAGAACCCACATGTTGA 58.754 41.667 0.00 0.00 0.00 3.18
27 28 4.093408 CGTCATTAGAGAACCCACATGTTG 59.907 45.833 0.00 0.00 0.00 3.33
28 29 4.253685 CGTCATTAGAGAACCCACATGTT 58.746 43.478 0.00 0.00 0.00 2.71
29 30 3.369471 CCGTCATTAGAGAACCCACATGT 60.369 47.826 0.00 0.00 0.00 3.21
30 31 3.198068 CCGTCATTAGAGAACCCACATG 58.802 50.000 0.00 0.00 0.00 3.21
31 32 2.838202 ACCGTCATTAGAGAACCCACAT 59.162 45.455 0.00 0.00 0.00 3.21
32 33 2.253610 ACCGTCATTAGAGAACCCACA 58.746 47.619 0.00 0.00 0.00 4.17
33 34 3.429960 GGTACCGTCATTAGAGAACCCAC 60.430 52.174 0.00 0.00 0.00 4.61
34 35 2.762327 GGTACCGTCATTAGAGAACCCA 59.238 50.000 0.00 0.00 0.00 4.51
35 36 2.102084 GGGTACCGTCATTAGAGAACCC 59.898 54.545 5.65 0.00 40.86 4.11
36 37 3.449528 GGGTACCGTCATTAGAGAACC 57.550 52.381 5.65 0.00 40.86 3.62
51 52 3.211045 ACAATGACAACTGTGTGGGTAC 58.789 45.455 0.00 0.00 38.41 3.34
52 53 3.569194 ACAATGACAACTGTGTGGGTA 57.431 42.857 0.00 0.00 38.41 3.69
53 54 2.435372 ACAATGACAACTGTGTGGGT 57.565 45.000 0.00 0.00 38.41 4.51
54 55 5.452078 AAATACAATGACAACTGTGTGGG 57.548 39.130 4.27 0.00 38.41 4.61
55 56 7.592938 ACATAAATACAATGACAACTGTGTGG 58.407 34.615 4.27 0.00 38.41 4.17
56 57 8.506437 AGACATAAATACAATGACAACTGTGTG 58.494 33.333 4.27 0.00 38.41 3.82
57 58 8.621532 AGACATAAATACAATGACAACTGTGT 57.378 30.769 4.27 0.00 42.10 3.72
58 59 9.333497 CAAGACATAAATACAATGACAACTGTG 57.667 33.333 4.27 0.00 0.00 3.66
59 60 8.514594 CCAAGACATAAATACAATGACAACTGT 58.485 33.333 0.00 0.00 0.00 3.55
60 61 8.729756 TCCAAGACATAAATACAATGACAACTG 58.270 33.333 0.00 0.00 0.00 3.16
61 62 8.862325 TCCAAGACATAAATACAATGACAACT 57.138 30.769 0.00 0.00 0.00 3.16
62 63 9.906660 TTTCCAAGACATAAATACAATGACAAC 57.093 29.630 0.00 0.00 0.00 3.32
77 78 9.717942 CTAGCTAGCTATTATTTTCCAAGACAT 57.282 33.333 24.36 0.00 0.00 3.06
78 79 7.657761 GCTAGCTAGCTATTATTTTCCAAGACA 59.342 37.037 33.71 0.00 45.62 3.41
79 80 7.148722 CGCTAGCTAGCTATTATTTTCCAAGAC 60.149 40.741 36.02 7.97 46.85 3.01
80 81 6.868864 CGCTAGCTAGCTATTATTTTCCAAGA 59.131 38.462 36.02 0.00 46.85 3.02
81 82 6.647067 ACGCTAGCTAGCTATTATTTTCCAAG 59.353 38.462 36.02 20.79 46.85 3.61
82 83 6.522054 ACGCTAGCTAGCTATTATTTTCCAA 58.478 36.000 36.02 0.00 46.85 3.53
83 84 6.097915 ACGCTAGCTAGCTATTATTTTCCA 57.902 37.500 36.02 0.44 46.85 3.53
84 85 7.422878 AAACGCTAGCTAGCTATTATTTTCC 57.577 36.000 36.02 9.80 46.85 3.13
85 86 8.548721 TGAAAACGCTAGCTAGCTATTATTTTC 58.451 33.333 36.02 33.20 46.85 2.29
86 87 8.433421 TGAAAACGCTAGCTAGCTATTATTTT 57.567 30.769 36.02 29.57 46.85 1.82
87 88 8.433421 TTGAAAACGCTAGCTAGCTATTATTT 57.567 30.769 36.02 27.32 46.85 1.40
88 89 7.307455 GCTTGAAAACGCTAGCTAGCTATTATT 60.307 37.037 36.02 24.49 46.85 1.40
89 90 6.146347 GCTTGAAAACGCTAGCTAGCTATTAT 59.854 38.462 36.02 21.53 46.85 1.28
90 91 5.462398 GCTTGAAAACGCTAGCTAGCTATTA 59.538 40.000 36.02 18.57 46.85 0.98
91 92 4.271291 GCTTGAAAACGCTAGCTAGCTATT 59.729 41.667 36.02 27.93 46.85 1.73
92 93 3.804873 GCTTGAAAACGCTAGCTAGCTAT 59.195 43.478 36.02 24.47 46.85 2.97
93 94 3.187700 GCTTGAAAACGCTAGCTAGCTA 58.812 45.455 36.02 22.85 46.85 3.32
94 95 2.003301 GCTTGAAAACGCTAGCTAGCT 58.997 47.619 36.02 23.12 46.85 3.32
95 96 1.732259 TGCTTGAAAACGCTAGCTAGC 59.268 47.619 31.88 31.88 45.62 3.42
96 97 5.043903 TCTATGCTTGAAAACGCTAGCTAG 58.956 41.667 16.84 16.84 37.49 3.42
97 98 5.006153 TCTATGCTTGAAAACGCTAGCTA 57.994 39.130 13.93 0.00 37.49 3.32
98 99 3.861840 TCTATGCTTGAAAACGCTAGCT 58.138 40.909 13.93 0.00 37.49 3.32
99 100 4.802876 ATCTATGCTTGAAAACGCTAGC 57.197 40.909 4.06 4.06 37.20 3.42
100 101 7.126398 GGTTTATCTATGCTTGAAAACGCTAG 58.874 38.462 0.00 0.00 0.00 3.42
101 102 6.596106 TGGTTTATCTATGCTTGAAAACGCTA 59.404 34.615 0.00 0.00 0.00 4.26
102 103 5.414454 TGGTTTATCTATGCTTGAAAACGCT 59.586 36.000 0.00 0.00 0.00 5.07
103 104 5.511729 GTGGTTTATCTATGCTTGAAAACGC 59.488 40.000 0.00 0.00 0.00 4.84
104 105 6.607689 TGTGGTTTATCTATGCTTGAAAACG 58.392 36.000 0.00 0.00 0.00 3.60
105 106 8.699749 GTTTGTGGTTTATCTATGCTTGAAAAC 58.300 33.333 0.00 0.00 0.00 2.43
106 107 7.870445 GGTTTGTGGTTTATCTATGCTTGAAAA 59.130 33.333 0.00 0.00 0.00 2.29
107 108 7.014711 TGGTTTGTGGTTTATCTATGCTTGAAA 59.985 33.333 0.00 0.00 0.00 2.69
108 109 6.491745 TGGTTTGTGGTTTATCTATGCTTGAA 59.508 34.615 0.00 0.00 0.00 2.69
109 110 6.007076 TGGTTTGTGGTTTATCTATGCTTGA 58.993 36.000 0.00 0.00 0.00 3.02
110 111 6.092748 GTGGTTTGTGGTTTATCTATGCTTG 58.907 40.000 0.00 0.00 0.00 4.01
111 112 5.772672 TGTGGTTTGTGGTTTATCTATGCTT 59.227 36.000 0.00 0.00 0.00 3.91
112 113 5.183140 GTGTGGTTTGTGGTTTATCTATGCT 59.817 40.000 0.00 0.00 0.00 3.79
113 114 5.183140 AGTGTGGTTTGTGGTTTATCTATGC 59.817 40.000 0.00 0.00 0.00 3.14
114 115 6.429692 TCAGTGTGGTTTGTGGTTTATCTATG 59.570 38.462 0.00 0.00 0.00 2.23
115 116 6.539173 TCAGTGTGGTTTGTGGTTTATCTAT 58.461 36.000 0.00 0.00 0.00 1.98
116 117 5.931294 TCAGTGTGGTTTGTGGTTTATCTA 58.069 37.500 0.00 0.00 0.00 1.98
117 118 4.787551 TCAGTGTGGTTTGTGGTTTATCT 58.212 39.130 0.00 0.00 0.00 1.98
118 119 5.705609 ATCAGTGTGGTTTGTGGTTTATC 57.294 39.130 0.00 0.00 0.00 1.75
119 120 5.596361 TGAATCAGTGTGGTTTGTGGTTTAT 59.404 36.000 0.00 0.00 0.00 1.40
120 121 4.950475 TGAATCAGTGTGGTTTGTGGTTTA 59.050 37.500 0.00 0.00 0.00 2.01
121 122 3.766591 TGAATCAGTGTGGTTTGTGGTTT 59.233 39.130 0.00 0.00 0.00 3.27
122 123 3.360867 TGAATCAGTGTGGTTTGTGGTT 58.639 40.909 0.00 0.00 0.00 3.67
123 124 2.951642 CTGAATCAGTGTGGTTTGTGGT 59.048 45.455 1.31 0.00 0.00 4.16
124 125 3.003689 GTCTGAATCAGTGTGGTTTGTGG 59.996 47.826 10.36 0.00 32.61 4.17
125 126 3.627123 TGTCTGAATCAGTGTGGTTTGTG 59.373 43.478 10.36 0.00 32.61 3.33
126 127 3.884895 TGTCTGAATCAGTGTGGTTTGT 58.115 40.909 10.36 0.00 32.61 2.83
127 128 6.748333 ATATGTCTGAATCAGTGTGGTTTG 57.252 37.500 10.36 0.00 32.61 2.93
128 129 6.942005 TGAATATGTCTGAATCAGTGTGGTTT 59.058 34.615 10.36 0.00 32.61 3.27
129 130 6.475504 TGAATATGTCTGAATCAGTGTGGTT 58.524 36.000 10.36 1.95 32.61 3.67
130 131 6.053632 TGAATATGTCTGAATCAGTGTGGT 57.946 37.500 10.36 0.00 32.61 4.16
131 132 5.007430 GCTGAATATGTCTGAATCAGTGTGG 59.993 44.000 10.36 0.00 39.68 4.17
132 133 5.007430 GGCTGAATATGTCTGAATCAGTGTG 59.993 44.000 10.36 0.00 39.68 3.82
133 134 5.121811 GGCTGAATATGTCTGAATCAGTGT 58.878 41.667 10.36 0.63 39.68 3.55
134 135 5.121105 TGGCTGAATATGTCTGAATCAGTG 58.879 41.667 10.36 0.00 39.68 3.66
135 136 5.363562 TGGCTGAATATGTCTGAATCAGT 57.636 39.130 10.36 0.00 39.68 3.41
136 137 4.755629 CCTGGCTGAATATGTCTGAATCAG 59.244 45.833 3.38 3.38 40.30 2.90
137 138 4.711399 CCTGGCTGAATATGTCTGAATCA 58.289 43.478 0.00 0.00 0.00 2.57
138 139 3.501445 GCCTGGCTGAATATGTCTGAATC 59.499 47.826 12.43 0.00 0.00 2.52
139 140 3.484407 GCCTGGCTGAATATGTCTGAAT 58.516 45.455 12.43 0.00 0.00 2.57
140 141 2.421952 GGCCTGGCTGAATATGTCTGAA 60.422 50.000 19.68 0.00 0.00 3.02
141 142 1.141657 GGCCTGGCTGAATATGTCTGA 59.858 52.381 19.68 0.00 0.00 3.27
142 143 1.134007 TGGCCTGGCTGAATATGTCTG 60.134 52.381 19.68 0.00 0.00 3.51
143 144 1.216064 TGGCCTGGCTGAATATGTCT 58.784 50.000 19.68 0.00 0.00 3.41
144 145 1.952296 CTTGGCCTGGCTGAATATGTC 59.048 52.381 19.68 0.00 0.00 3.06
145 146 2.025863 GCTTGGCCTGGCTGAATATGT 61.026 52.381 19.68 0.00 0.00 2.29
146 147 0.672342 GCTTGGCCTGGCTGAATATG 59.328 55.000 19.68 3.63 0.00 1.78
147 148 0.820891 CGCTTGGCCTGGCTGAATAT 60.821 55.000 19.68 0.00 0.00 1.28
148 149 1.451927 CGCTTGGCCTGGCTGAATA 60.452 57.895 19.68 0.00 0.00 1.75
149 150 2.753043 CGCTTGGCCTGGCTGAAT 60.753 61.111 19.68 0.00 0.00 2.57
150 151 3.490031 TTCGCTTGGCCTGGCTGAA 62.490 57.895 19.68 10.76 0.00 3.02
151 152 3.907260 CTTCGCTTGGCCTGGCTGA 62.907 63.158 19.68 6.50 0.00 4.26
152 153 3.437795 CTTCGCTTGGCCTGGCTG 61.438 66.667 19.68 10.28 0.00 4.85
153 154 3.196207 TTCTTCGCTTGGCCTGGCT 62.196 57.895 19.68 0.00 0.00 4.75
154 155 2.672996 TTCTTCGCTTGGCCTGGC 60.673 61.111 11.05 11.05 0.00 4.85
155 156 2.042831 CCTTCTTCGCTTGGCCTGG 61.043 63.158 3.32 0.00 0.00 4.45
156 157 1.301677 GACCTTCTTCGCTTGGCCTG 61.302 60.000 3.32 0.00 0.00 4.85
157 158 1.003233 GACCTTCTTCGCTTGGCCT 60.003 57.895 3.32 0.00 0.00 5.19
158 159 2.391389 CGACCTTCTTCGCTTGGCC 61.391 63.158 0.00 0.00 31.03 5.36
159 160 3.169198 CGACCTTCTTCGCTTGGC 58.831 61.111 0.00 0.00 31.03 4.52
165 166 4.039703 TGTATAAATCGCGACCTTCTTCG 58.960 43.478 12.93 0.00 42.15 3.79
166 167 5.961395 TTGTATAAATCGCGACCTTCTTC 57.039 39.130 12.93 0.10 0.00 2.87
167 168 5.220340 CGTTTGTATAAATCGCGACCTTCTT 60.220 40.000 12.93 0.00 0.00 2.52
168 169 4.266976 CGTTTGTATAAATCGCGACCTTCT 59.733 41.667 12.93 3.30 0.00 2.85
169 170 4.032104 ACGTTTGTATAAATCGCGACCTTC 59.968 41.667 12.93 0.58 0.00 3.46
170 171 3.928375 ACGTTTGTATAAATCGCGACCTT 59.072 39.130 12.93 11.01 0.00 3.50
171 172 3.514645 ACGTTTGTATAAATCGCGACCT 58.485 40.909 12.93 3.49 0.00 3.85
172 173 3.304026 TGACGTTTGTATAAATCGCGACC 59.696 43.478 12.93 0.00 0.00 4.79
173 174 4.488518 TGACGTTTGTATAAATCGCGAC 57.511 40.909 12.93 0.00 0.00 5.19
174 175 5.485831 CATTGACGTTTGTATAAATCGCGA 58.514 37.500 13.09 13.09 0.00 5.87
175 176 4.664410 CCATTGACGTTTGTATAAATCGCG 59.336 41.667 0.00 0.00 0.00 5.87
176 177 4.436523 GCCATTGACGTTTGTATAAATCGC 59.563 41.667 0.00 0.00 0.00 4.58
177 178 4.664410 CGCCATTGACGTTTGTATAAATCG 59.336 41.667 0.00 5.76 0.00 3.34
178 179 5.802064 TCGCCATTGACGTTTGTATAAATC 58.198 37.500 0.00 0.00 0.00 2.17
179 180 5.804692 TCGCCATTGACGTTTGTATAAAT 57.195 34.783 0.00 0.00 0.00 1.40
180 181 5.608676 TTCGCCATTGACGTTTGTATAAA 57.391 34.783 0.00 0.00 0.00 1.40
181 182 4.436317 GCTTCGCCATTGACGTTTGTATAA 60.436 41.667 0.00 0.00 0.00 0.98
182 183 3.062909 GCTTCGCCATTGACGTTTGTATA 59.937 43.478 0.00 0.00 0.00 1.47
183 184 2.159572 GCTTCGCCATTGACGTTTGTAT 60.160 45.455 0.00 0.00 0.00 2.29
184 185 1.195900 GCTTCGCCATTGACGTTTGTA 59.804 47.619 0.00 0.00 0.00 2.41
185 186 0.040425 GCTTCGCCATTGACGTTTGT 60.040 50.000 0.00 0.00 0.00 2.83
186 187 2.712077 GCTTCGCCATTGACGTTTG 58.288 52.632 0.00 0.00 0.00 2.93
199 200 0.796312 AATGTGTTAGCGTGGCTTCG 59.204 50.000 0.00 0.00 40.44 3.79
200 201 3.000727 ACTAATGTGTTAGCGTGGCTTC 58.999 45.455 0.00 0.00 40.82 3.86
201 202 3.053831 ACTAATGTGTTAGCGTGGCTT 57.946 42.857 0.00 0.00 40.82 4.35
202 203 2.762535 ACTAATGTGTTAGCGTGGCT 57.237 45.000 0.00 0.00 40.82 4.75
203 204 2.606272 GGTACTAATGTGTTAGCGTGGC 59.394 50.000 0.00 0.00 40.82 5.01
204 205 4.119442 AGGTACTAATGTGTTAGCGTGG 57.881 45.455 0.00 0.00 40.82 4.94
219 220 8.376270 GGGTGCTTCTGATTATATTTAGGTACT 58.624 37.037 0.00 0.00 46.37 2.73
220 221 8.154856 TGGGTGCTTCTGATTATATTTAGGTAC 58.845 37.037 0.00 0.00 0.00 3.34
221 222 8.270137 TGGGTGCTTCTGATTATATTTAGGTA 57.730 34.615 0.00 0.00 0.00 3.08
222 223 7.149202 TGGGTGCTTCTGATTATATTTAGGT 57.851 36.000 0.00 0.00 0.00 3.08
223 224 9.911788 ATATGGGTGCTTCTGATTATATTTAGG 57.088 33.333 0.00 0.00 0.00 2.69
229 230 9.671279 CAACATATATGGGTGCTTCTGATTATA 57.329 33.333 16.96 0.00 0.00 0.98
230 231 8.166061 ACAACATATATGGGTGCTTCTGATTAT 58.834 33.333 16.96 0.00 0.00 1.28
231 232 7.517320 ACAACATATATGGGTGCTTCTGATTA 58.483 34.615 16.96 0.00 0.00 1.75
232 233 6.367983 ACAACATATATGGGTGCTTCTGATT 58.632 36.000 16.96 0.00 0.00 2.57
233 234 5.945310 ACAACATATATGGGTGCTTCTGAT 58.055 37.500 16.96 0.00 0.00 2.90
234 235 5.372343 ACAACATATATGGGTGCTTCTGA 57.628 39.130 16.96 0.00 0.00 3.27
235 236 5.824624 AGAACAACATATATGGGTGCTTCTG 59.175 40.000 16.96 3.97 0.00 3.02
236 237 6.006275 AGAACAACATATATGGGTGCTTCT 57.994 37.500 16.96 17.77 0.00 2.85
237 238 6.699575 AAGAACAACATATATGGGTGCTTC 57.300 37.500 19.69 17.64 32.83 3.86
238 239 6.260050 CGTAAGAACAACATATATGGGTGCTT 59.740 38.462 24.76 24.76 38.13 3.91
239 240 5.758296 CGTAAGAACAACATATATGGGTGCT 59.242 40.000 16.96 14.33 43.02 4.40
240 241 5.526111 ACGTAAGAACAACATATATGGGTGC 59.474 40.000 16.96 12.47 43.62 5.01
241 242 7.924412 AGTACGTAAGAACAACATATATGGGTG 59.076 37.037 16.96 15.32 43.62 4.61
242 243 8.015185 AGTACGTAAGAACAACATATATGGGT 57.985 34.615 16.96 11.33 43.62 4.51
243 244 8.882415 AAGTACGTAAGAACAACATATATGGG 57.118 34.615 16.96 10.72 43.62 4.00
244 245 9.524106 TGAAGTACGTAAGAACAACATATATGG 57.476 33.333 16.96 2.79 43.62 2.74
247 248 9.524106 CCATGAAGTACGTAAGAACAACATATA 57.476 33.333 0.00 0.00 43.62 0.86
248 249 7.494625 CCCATGAAGTACGTAAGAACAACATAT 59.505 37.037 0.00 0.00 43.62 1.78
249 250 6.814644 CCCATGAAGTACGTAAGAACAACATA 59.185 38.462 0.00 0.00 43.62 2.29
250 251 5.642063 CCCATGAAGTACGTAAGAACAACAT 59.358 40.000 0.00 0.00 43.62 2.71
251 252 4.992319 CCCATGAAGTACGTAAGAACAACA 59.008 41.667 0.00 0.00 43.62 3.33
252 253 5.232463 TCCCATGAAGTACGTAAGAACAAC 58.768 41.667 0.00 0.00 43.62 3.32
253 254 5.471556 TCCCATGAAGTACGTAAGAACAA 57.528 39.130 0.00 0.00 43.62 2.83
254 255 4.619863 GCTCCCATGAAGTACGTAAGAACA 60.620 45.833 0.00 0.00 43.62 3.18
255 256 3.864003 GCTCCCATGAAGTACGTAAGAAC 59.136 47.826 0.00 0.00 43.62 3.01
256 257 3.428452 CGCTCCCATGAAGTACGTAAGAA 60.428 47.826 0.00 0.00 43.62 2.52
257 258 2.098607 CGCTCCCATGAAGTACGTAAGA 59.901 50.000 0.00 0.00 43.62 2.10
259 260 1.135527 CCGCTCCCATGAAGTACGTAA 59.864 52.381 0.00 0.00 0.00 3.18
260 261 0.742505 CCGCTCCCATGAAGTACGTA 59.257 55.000 0.00 0.00 0.00 3.57
261 262 1.515954 CCGCTCCCATGAAGTACGT 59.484 57.895 0.00 0.00 0.00 3.57
262 263 1.883084 GCCGCTCCCATGAAGTACG 60.883 63.158 0.00 0.00 0.00 3.67
263 264 1.090052 GTGCCGCTCCCATGAAGTAC 61.090 60.000 0.00 0.00 0.00 2.73
264 265 1.220749 GTGCCGCTCCCATGAAGTA 59.779 57.895 0.00 0.00 0.00 2.24
265 266 2.045926 GTGCCGCTCCCATGAAGT 60.046 61.111 0.00 0.00 0.00 3.01
266 267 2.825836 GGTGCCGCTCCCATGAAG 60.826 66.667 0.00 0.00 0.00 3.02
267 268 3.329889 AGGTGCCGCTCCCATGAA 61.330 61.111 7.87 0.00 0.00 2.57
268 269 4.100084 CAGGTGCCGCTCCCATGA 62.100 66.667 7.87 0.00 0.00 3.07
279 280 4.603535 ACTTGGGGTGGCAGGTGC 62.604 66.667 0.00 0.00 41.14 5.01
280 281 2.598394 CACTTGGGGTGGCAGGTG 60.598 66.667 0.00 0.00 41.90 4.00
288 289 1.770110 TGGAGCAGACACTTGGGGT 60.770 57.895 0.00 0.00 0.00 4.95
289 290 1.002868 CTGGAGCAGACACTTGGGG 60.003 63.158 0.00 0.00 32.44 4.96
290 291 2.061220 TCTGGAGCAGACACTTGGG 58.939 57.895 0.00 0.00 35.39 4.12
302 303 0.107312 CCATGGGCTCTTGTCTGGAG 60.107 60.000 2.85 0.00 0.00 3.86
303 304 0.842030 ACCATGGGCTCTTGTCTGGA 60.842 55.000 18.09 0.00 0.00 3.86
304 305 0.038744 AACCATGGGCTCTTGTCTGG 59.961 55.000 18.09 0.00 0.00 3.86
305 306 1.915141 AAACCATGGGCTCTTGTCTG 58.085 50.000 18.09 0.00 0.00 3.51
306 307 2.644798 AGTAAACCATGGGCTCTTGTCT 59.355 45.455 18.09 1.01 0.00 3.41
307 308 3.073274 AGTAAACCATGGGCTCTTGTC 57.927 47.619 18.09 0.00 0.00 3.18
308 309 3.525800 AAGTAAACCATGGGCTCTTGT 57.474 42.857 18.09 0.00 0.00 3.16
309 310 8.157476 AGTATATAAGTAAACCATGGGCTCTTG 58.843 37.037 18.09 0.00 0.00 3.02
310 311 8.276453 AGTATATAAGTAAACCATGGGCTCTT 57.724 34.615 18.09 15.88 0.00 2.85
311 312 7.873699 AGTATATAAGTAAACCATGGGCTCT 57.126 36.000 18.09 5.96 0.00 4.09
312 313 9.032624 TCTAGTATATAAGTAAACCATGGGCTC 57.967 37.037 18.09 3.56 0.00 4.70
313 314 8.967779 TCTAGTATATAAGTAAACCATGGGCT 57.032 34.615 18.09 4.76 0.00 5.19
314 315 7.764901 GCTCTAGTATATAAGTAAACCATGGGC 59.235 40.741 18.09 3.19 0.00 5.36
315 316 8.258708 GGCTCTAGTATATAAGTAAACCATGGG 58.741 40.741 18.09 0.00 0.00 4.00
316 317 8.812972 TGGCTCTAGTATATAAGTAAACCATGG 58.187 37.037 11.19 11.19 0.00 3.66
317 318 9.640963 GTGGCTCTAGTATATAAGTAAACCATG 57.359 37.037 0.00 0.00 0.00 3.66
318 319 8.521176 CGTGGCTCTAGTATATAAGTAAACCAT 58.479 37.037 0.00 0.00 0.00 3.55
319 320 7.040201 CCGTGGCTCTAGTATATAAGTAAACCA 60.040 40.741 0.00 0.00 0.00 3.67
320 321 7.040132 ACCGTGGCTCTAGTATATAAGTAAACC 60.040 40.741 0.00 0.00 0.00 3.27
321 322 7.806960 CACCGTGGCTCTAGTATATAAGTAAAC 59.193 40.741 0.00 0.00 0.00 2.01
322 323 7.503566 ACACCGTGGCTCTAGTATATAAGTAAA 59.496 37.037 3.03 0.00 0.00 2.01
323 324 7.000472 ACACCGTGGCTCTAGTATATAAGTAA 59.000 38.462 3.03 0.00 0.00 2.24
324 325 6.537355 ACACCGTGGCTCTAGTATATAAGTA 58.463 40.000 3.03 0.00 0.00 2.24
325 326 5.383476 ACACCGTGGCTCTAGTATATAAGT 58.617 41.667 3.03 0.00 0.00 2.24
326 327 5.472478 TGACACCGTGGCTCTAGTATATAAG 59.528 44.000 5.82 0.00 0.00 1.73
327 328 5.379187 TGACACCGTGGCTCTAGTATATAA 58.621 41.667 5.82 0.00 0.00 0.98
328 329 4.976864 TGACACCGTGGCTCTAGTATATA 58.023 43.478 5.82 0.00 0.00 0.86
329 330 3.828921 TGACACCGTGGCTCTAGTATAT 58.171 45.455 5.82 0.00 0.00 0.86
330 331 3.286329 TGACACCGTGGCTCTAGTATA 57.714 47.619 5.82 0.00 0.00 1.47
331 332 2.139323 TGACACCGTGGCTCTAGTAT 57.861 50.000 5.82 0.00 0.00 2.12
332 333 2.139323 ATGACACCGTGGCTCTAGTA 57.861 50.000 5.82 0.00 0.00 1.82
333 334 1.204941 GAATGACACCGTGGCTCTAGT 59.795 52.381 5.82 0.00 0.00 2.57
334 335 1.204704 TGAATGACACCGTGGCTCTAG 59.795 52.381 5.82 0.00 0.00 2.43
335 336 1.262417 TGAATGACACCGTGGCTCTA 58.738 50.000 5.82 0.00 0.00 2.43
336 337 0.396435 TTGAATGACACCGTGGCTCT 59.604 50.000 5.82 0.00 0.00 4.09
337 338 1.234821 TTTGAATGACACCGTGGCTC 58.765 50.000 5.82 0.00 0.00 4.70
338 339 1.909700 ATTTGAATGACACCGTGGCT 58.090 45.000 5.82 0.00 0.00 4.75
339 340 2.030363 TGAATTTGAATGACACCGTGGC 60.030 45.455 3.03 0.00 0.00 5.01
340 341 3.253188 ACTGAATTTGAATGACACCGTGG 59.747 43.478 3.03 0.00 0.00 4.94
341 342 4.488126 ACTGAATTTGAATGACACCGTG 57.512 40.909 0.00 0.00 0.00 4.94
342 343 4.821805 AGAACTGAATTTGAATGACACCGT 59.178 37.500 0.00 0.00 0.00 4.83
343 344 5.362556 AGAACTGAATTTGAATGACACCG 57.637 39.130 0.00 0.00 0.00 4.94
344 345 6.738114 TGAAGAACTGAATTTGAATGACACC 58.262 36.000 0.00 0.00 0.00 4.16
345 346 9.334693 GTATGAAGAACTGAATTTGAATGACAC 57.665 33.333 0.00 0.00 0.00 3.67
346 347 9.288576 AGTATGAAGAACTGAATTTGAATGACA 57.711 29.630 0.00 0.00 0.00 3.58
372 373 9.288576 CCAATCTGGAGAGCAAATATATTGTTA 57.711 33.333 0.00 0.00 40.96 2.41
373 374 7.255730 GCCAATCTGGAGAGCAAATATATTGTT 60.256 37.037 0.00 0.00 40.96 2.83
374 375 6.208204 GCCAATCTGGAGAGCAAATATATTGT 59.792 38.462 0.00 0.00 40.96 2.71
375 376 6.433404 AGCCAATCTGGAGAGCAAATATATTG 59.567 38.462 0.00 0.00 40.96 1.90
376 377 6.433404 CAGCCAATCTGGAGAGCAAATATATT 59.567 38.462 0.00 0.00 40.96 1.28
377 378 5.944599 CAGCCAATCTGGAGAGCAAATATAT 59.055 40.000 0.00 0.00 40.96 0.86
378 379 5.311265 CAGCCAATCTGGAGAGCAAATATA 58.689 41.667 0.00 0.00 40.96 0.86
379 380 4.142790 CAGCCAATCTGGAGAGCAAATAT 58.857 43.478 0.00 0.00 40.96 1.28
412 413 8.918116 ACAAGCATACATTACTTCATAGAGAGA 58.082 33.333 0.00 0.00 0.00 3.10
413 414 9.539825 AACAAGCATACATTACTTCATAGAGAG 57.460 33.333 0.00 0.00 0.00 3.20
414 415 9.890629 AAACAAGCATACATTACTTCATAGAGA 57.109 29.630 0.00 0.00 0.00 3.10
416 417 9.890629 AGAAACAAGCATACATTACTTCATAGA 57.109 29.630 0.00 0.00 0.00 1.98
430 431 5.592282 TGTTCAGGTCAAAGAAACAAGCATA 59.408 36.000 0.00 0.00 0.00 3.14
457 458 7.941790 AGGTAATTGGTATTGCAAAAATGGTTT 59.058 29.630 1.71 0.00 0.00 3.27
463 464 7.736447 CCAAAGGTAATTGGTATTGCAAAAA 57.264 32.000 1.71 0.00 43.99 1.94
510 511 7.976175 GGAGGAAAATGGCTAACTAAGAAAATG 59.024 37.037 0.00 0.00 0.00 2.32
511 512 7.895962 AGGAGGAAAATGGCTAACTAAGAAAAT 59.104 33.333 0.00 0.00 0.00 1.82
530 531 5.594317 CAGAAGAAAGGACAAAAAGGAGGAA 59.406 40.000 0.00 0.00 0.00 3.36
534 535 4.644685 CCACAGAAGAAAGGACAAAAAGGA 59.355 41.667 0.00 0.00 0.00 3.36
566 567 2.424956 GTTCAGGCCTTTCATTAGCAGG 59.575 50.000 0.00 0.00 0.00 4.85
571 572 3.084039 CAGCAGTTCAGGCCTTTCATTA 58.916 45.455 0.00 0.00 0.00 1.90
578 579 0.906756 TAGAGCAGCAGTTCAGGCCT 60.907 55.000 0.00 0.00 0.00 5.19
579 580 0.461693 CTAGAGCAGCAGTTCAGGCC 60.462 60.000 0.00 0.00 0.00 5.19
580 581 0.461693 CCTAGAGCAGCAGTTCAGGC 60.462 60.000 0.00 0.00 0.00 4.85
581 582 1.136695 CTCCTAGAGCAGCAGTTCAGG 59.863 57.143 0.00 1.21 0.00 3.86
582 583 1.136695 CCTCCTAGAGCAGCAGTTCAG 59.863 57.143 0.00 0.00 0.00 3.02
587 588 0.961019 CTAGCCTCCTAGAGCAGCAG 59.039 60.000 0.00 0.00 43.07 4.24
612 613 7.047891 GGTCTGTATCAGAACCAATATGTTCA 58.952 38.462 8.24 0.00 45.62 3.18
616 702 6.586344 AGTGGTCTGTATCAGAACCAATATG 58.414 40.000 11.50 0.00 46.60 1.78
625 711 4.141459 ACTCCGATAGTGGTCTGTATCAGA 60.141 45.833 0.00 0.00 36.93 3.27
626 712 4.138290 ACTCCGATAGTGGTCTGTATCAG 58.862 47.826 0.00 0.00 36.93 2.90
632 718 3.868757 TTCAACTCCGATAGTGGTCTG 57.131 47.619 0.00 0.00 38.88 3.51
633 719 3.833070 ACTTTCAACTCCGATAGTGGTCT 59.167 43.478 0.00 0.00 38.88 3.85
635 721 4.618920 AACTTTCAACTCCGATAGTGGT 57.381 40.909 0.00 0.00 38.88 4.16
664 750 4.552992 CACGCGTAATCTTAACTCGAAAC 58.447 43.478 13.44 0.00 0.00 2.78
669 755 1.591619 GGGCACGCGTAATCTTAACTC 59.408 52.381 13.44 0.00 0.00 3.01
677 763 0.739813 GAAGTCAGGGCACGCGTAAT 60.740 55.000 13.44 0.00 0.00 1.89
678 764 1.373748 GAAGTCAGGGCACGCGTAA 60.374 57.895 13.44 0.00 0.00 3.18
680 766 4.681978 GGAAGTCAGGGCACGCGT 62.682 66.667 5.58 5.58 0.00 6.01
681 767 4.680237 TGGAAGTCAGGGCACGCG 62.680 66.667 3.53 3.53 0.00 6.01
682 768 1.244019 AATTGGAAGTCAGGGCACGC 61.244 55.000 0.00 0.00 0.00 5.34
683 769 0.523072 CAATTGGAAGTCAGGGCACG 59.477 55.000 0.00 0.00 0.00 5.34
689 776 2.816087 CAGGGTGACAATTGGAAGTCAG 59.184 50.000 10.83 0.00 44.62 3.51
720 807 3.568430 ACAAGCTGCATGATGTATCCATG 59.432 43.478 12.28 0.00 43.06 3.66
724 811 5.998454 AACTACAAGCTGCATGATGTATC 57.002 39.130 12.28 0.00 0.00 2.24
726 813 4.635765 GGAAACTACAAGCTGCATGATGTA 59.364 41.667 12.28 9.17 0.00 2.29
736 823 4.150897 TGACAACAGGAAACTACAAGCT 57.849 40.909 0.00 0.00 40.21 3.74
737 824 4.275936 ACATGACAACAGGAAACTACAAGC 59.724 41.667 0.00 0.00 40.21 4.01
738 825 5.277974 CCACATGACAACAGGAAACTACAAG 60.278 44.000 0.00 0.00 40.21 3.16
744 831 3.626028 GTCCACATGACAACAGGAAAC 57.374 47.619 0.00 0.00 43.85 2.78
754 841 9.525409 ACGTAGTATTTTTATAGTCCACATGAC 57.475 33.333 0.00 0.00 41.94 3.06
760 847 9.687210 CATGCTACGTAGTATTTTTATAGTCCA 57.313 33.333 21.70 7.67 44.56 4.02
772 859 7.113437 AGGAGATGATACATGCTACGTAGTAT 58.887 38.462 22.98 21.00 44.56 2.12
773 860 6.473758 AGGAGATGATACATGCTACGTAGTA 58.526 40.000 22.98 19.62 45.11 1.82
775 862 5.888691 AGGAGATGATACATGCTACGTAG 57.111 43.478 18.47 18.47 0.00 3.51
776 863 7.309012 GGTTAAGGAGATGATACATGCTACGTA 60.309 40.741 0.00 0.00 0.00 3.57
777 864 6.448006 GTTAAGGAGATGATACATGCTACGT 58.552 40.000 0.00 0.00 0.00 3.57
778 865 5.864474 GGTTAAGGAGATGATACATGCTACG 59.136 44.000 0.00 0.00 0.00 3.51
779 866 6.870965 CAGGTTAAGGAGATGATACATGCTAC 59.129 42.308 0.00 0.00 0.00 3.58
784 871 7.345653 TCAGTTCAGGTTAAGGAGATGATACAT 59.654 37.037 0.00 0.00 0.00 2.29
789 876 4.838423 TGTCAGTTCAGGTTAAGGAGATGA 59.162 41.667 0.00 0.00 0.00 2.92
791 878 4.841246 ACTGTCAGTTCAGGTTAAGGAGAT 59.159 41.667 0.00 0.00 39.48 2.75
797 884 3.553508 GGCGTACTGTCAGTTCAGGTTAA 60.554 47.826 11.54 0.00 39.48 2.01
801 888 0.317160 TGGCGTACTGTCAGTTCAGG 59.683 55.000 11.54 0.90 39.48 3.86
804 891 2.806244 ACAAATGGCGTACTGTCAGTTC 59.194 45.455 11.54 5.07 38.65 3.01
811 898 3.665848 CGTGGTTTACAAATGGCGTACTG 60.666 47.826 0.00 0.00 0.00 2.74
895 1000 0.817654 CATCCGGCGCAGAGGATATA 59.182 55.000 24.28 4.61 42.83 0.86
896 1001 1.593787 CATCCGGCGCAGAGGATAT 59.406 57.895 24.28 8.15 42.83 1.63
897 1002 2.574018 CCATCCGGCGCAGAGGATA 61.574 63.158 24.28 5.54 42.83 2.59
898 1003 3.933722 CCATCCGGCGCAGAGGAT 61.934 66.667 20.80 20.80 44.86 3.24
900 1005 4.899239 GTCCATCCGGCGCAGAGG 62.899 72.222 10.83 9.85 0.00 3.69
909 1014 3.445687 TGGTCGTCCGTCCATCCG 61.446 66.667 1.53 0.00 36.30 4.18
910 1015 2.183555 GTGGTCGTCCGTCCATCC 59.816 66.667 8.78 0.00 35.92 3.51
911 1016 1.033746 TAGGTGGTCGTCCGTCCATC 61.034 60.000 8.78 8.36 35.92 3.51
912 1017 0.396695 ATAGGTGGTCGTCCGTCCAT 60.397 55.000 8.78 0.00 35.92 3.41
913 1018 1.000521 ATAGGTGGTCGTCCGTCCA 60.001 57.895 13.09 1.53 36.30 4.02
914 1019 1.732308 GATAGGTGGTCGTCCGTCC 59.268 63.158 5.00 5.00 36.30 4.79
915 1020 0.750911 AGGATAGGTGGTCGTCCGTC 60.751 60.000 0.00 0.00 35.89 4.79
916 1021 0.750911 GAGGATAGGTGGTCGTCCGT 60.751 60.000 0.00 0.00 35.89 4.69
917 1022 0.465824 AGAGGATAGGTGGTCGTCCG 60.466 60.000 0.00 0.00 35.89 4.79
918 1023 1.033574 CAGAGGATAGGTGGTCGTCC 58.966 60.000 0.00 0.00 32.43 4.79
919 1024 0.386113 GCAGAGGATAGGTGGTCGTC 59.614 60.000 0.00 0.00 0.00 4.20
920 1025 0.033011 AGCAGAGGATAGGTGGTCGT 60.033 55.000 0.00 0.00 0.00 4.34
921 1026 0.671251 GAGCAGAGGATAGGTGGTCG 59.329 60.000 0.00 0.00 0.00 4.79
922 1027 1.781786 TGAGCAGAGGATAGGTGGTC 58.218 55.000 0.00 0.00 38.82 4.02
923 1028 2.090831 AGATGAGCAGAGGATAGGTGGT 60.091 50.000 0.00 0.00 0.00 4.16
924 1029 2.562298 GAGATGAGCAGAGGATAGGTGG 59.438 54.545 0.00 0.00 0.00 4.61
925 1030 2.562298 GGAGATGAGCAGAGGATAGGTG 59.438 54.545 0.00 0.00 0.00 4.00
926 1031 2.450500 AGGAGATGAGCAGAGGATAGGT 59.549 50.000 0.00 0.00 0.00 3.08
927 1032 3.173953 AGGAGATGAGCAGAGGATAGG 57.826 52.381 0.00 0.00 0.00 2.57
928 1033 7.231317 GGATATAAGGAGATGAGCAGAGGATAG 59.769 44.444 0.00 0.00 0.00 2.08
929 1034 7.066142 GGATATAAGGAGATGAGCAGAGGATA 58.934 42.308 0.00 0.00 0.00 2.59
930 1035 5.898972 GGATATAAGGAGATGAGCAGAGGAT 59.101 44.000 0.00 0.00 0.00 3.24
931 1036 5.016138 AGGATATAAGGAGATGAGCAGAGGA 59.984 44.000 0.00 0.00 0.00 3.71
932 1037 5.271598 AGGATATAAGGAGATGAGCAGAGG 58.728 45.833 0.00 0.00 0.00 3.69
933 1038 6.095860 CAGAGGATATAAGGAGATGAGCAGAG 59.904 46.154 0.00 0.00 0.00 3.35
934 1039 5.951148 CAGAGGATATAAGGAGATGAGCAGA 59.049 44.000 0.00 0.00 0.00 4.26
935 1040 5.394443 GCAGAGGATATAAGGAGATGAGCAG 60.394 48.000 0.00 0.00 0.00 4.24
936 1041 4.465660 GCAGAGGATATAAGGAGATGAGCA 59.534 45.833 0.00 0.00 0.00 4.26
937 1042 4.439974 CGCAGAGGATATAAGGAGATGAGC 60.440 50.000 0.00 0.00 0.00 4.26
938 1043 4.439974 GCGCAGAGGATATAAGGAGATGAG 60.440 50.000 0.30 0.00 0.00 2.90
939 1044 3.445450 GCGCAGAGGATATAAGGAGATGA 59.555 47.826 0.30 0.00 0.00 2.92
940 1045 3.733380 CGCGCAGAGGATATAAGGAGATG 60.733 52.174 8.75 0.00 0.00 2.90
941 1046 2.425312 CGCGCAGAGGATATAAGGAGAT 59.575 50.000 8.75 0.00 0.00 2.75
942 1047 1.813178 CGCGCAGAGGATATAAGGAGA 59.187 52.381 8.75 0.00 0.00 3.71
943 1048 1.734047 GCGCGCAGAGGATATAAGGAG 60.734 57.143 29.10 0.00 0.00 3.69
944 1049 0.243907 GCGCGCAGAGGATATAAGGA 59.756 55.000 29.10 0.00 0.00 3.36
945 1050 1.073216 CGCGCGCAGAGGATATAAGG 61.073 60.000 32.61 5.56 0.00 2.69
946 1051 1.073216 CCGCGCGCAGAGGATATAAG 61.073 60.000 32.61 9.66 43.02 1.73
981 1089 0.836606 TGATGGCTTGGCTTCGGATA 59.163 50.000 5.81 0.00 0.00 2.59
989 1097 3.126528 GCCTCATGATGGCTTGGC 58.873 61.111 21.85 14.98 46.38 4.52
1085 1202 2.357517 CTTCAGCTTCACGCCGGT 60.358 61.111 1.90 0.00 40.39 5.28
1165 1282 1.152756 AAAGGCTTGCGGAGTTGGT 60.153 52.632 0.00 0.00 0.00 3.67
1290 1410 2.037772 AGTGAGTTGCTTCAGGTGTAGG 59.962 50.000 0.00 0.00 0.00 3.18
1292 1412 2.965831 AGAGTGAGTTGCTTCAGGTGTA 59.034 45.455 0.00 0.00 0.00 2.90
1293 1413 1.765314 AGAGTGAGTTGCTTCAGGTGT 59.235 47.619 0.00 0.00 0.00 4.16
1303 1423 3.677121 CCATTCTCGAACAGAGTGAGTTG 59.323 47.826 0.00 0.00 46.86 3.16
1311 1431 4.142160 CCATGTAGACCATTCTCGAACAGA 60.142 45.833 0.00 0.00 32.75 3.41
1350 1470 1.708341 AGCTTGTCAGGTTGCCAATT 58.292 45.000 0.00 0.00 0.00 2.32
1390 1510 1.467920 CCCCTCAAATTCAGACTGCC 58.532 55.000 0.00 0.00 0.00 4.85
1397 1517 0.614415 AATGGCGCCCCTCAAATTCA 60.614 50.000 26.77 0.00 0.00 2.57
1399 1519 1.329913 GGAATGGCGCCCCTCAAATT 61.330 55.000 26.77 15.96 0.00 1.82
1530 1650 2.163818 TCAAAGTAACGGAGTGCAGG 57.836 50.000 0.00 0.00 45.00 4.85
1550 1673 7.034187 CCAATTGTTGGTGGGATTGATCCAA 62.034 44.000 11.87 0.00 46.10 3.53
1605 1728 3.073798 TCCCTGTCAAATTGTTGCCTCTA 59.926 43.478 0.00 0.00 34.50 2.43
1745 1868 3.672808 ACCAGCTGATTTTCTGACAGAG 58.327 45.455 17.39 0.00 34.07 3.35
2169 2307 9.151177 AGATCCAGGAATTGCAAATATTGTAAT 57.849 29.630 1.71 1.31 45.85 1.89
2199 2337 3.838244 ACACCACTGAAAGAGTTGCTA 57.162 42.857 0.00 0.00 37.43 3.49
2234 2372 5.570262 TTTAAGACGTTCTTGACATGTCG 57.430 39.130 20.54 10.79 37.29 4.35
2688 2830 2.859165 TTGGGATCTCCTGTGACAAC 57.141 50.000 0.00 0.00 36.20 3.32
2989 3133 0.463116 ACGCAGTCTTCCAACGGTTT 60.463 50.000 0.00 0.00 29.74 3.27
2990 7229 0.390124 TACGCAGTCTTCCAACGGTT 59.610 50.000 0.00 0.00 43.93 4.44
3123 7365 1.260561 GTCTCGCTGCGAAACAAGAAA 59.739 47.619 25.86 0.00 34.74 2.52
3222 7467 1.460699 AGGCCCTTTGACCTGGAAC 59.539 57.895 0.00 0.00 34.07 3.62
3459 7785 7.863375 GCTACAGATTCAGAATTATGACTACGT 59.137 37.037 1.37 0.00 0.00 3.57
3460 7786 8.079203 AGCTACAGATTCAGAATTATGACTACG 58.921 37.037 1.37 0.00 0.00 3.51
3508 7841 2.427742 TGCTCAAAACAGCATGCCA 58.572 47.368 15.66 0.00 44.73 4.92
3531 7864 1.293924 CCACAAAATGGTTGCGCAAA 58.706 45.000 26.87 11.27 44.46 3.68
3567 7900 6.303839 TGGGAGCTAAAACAAATAACACTCT 58.696 36.000 0.00 0.00 0.00 3.24
3578 8351 1.944024 CGTGTGTTGGGAGCTAAAACA 59.056 47.619 4.65 4.65 0.00 2.83
3579 8352 1.944709 ACGTGTGTTGGGAGCTAAAAC 59.055 47.619 0.00 0.00 0.00 2.43
3599 8378 3.449377 TGACCGTCTGCTTGGTATTGATA 59.551 43.478 0.00 0.00 38.99 2.15
3709 9921 1.595109 CAGGAACGCTGACAGCACA 60.595 57.895 26.32 0.00 42.58 4.57
3710 9922 2.959357 GCAGGAACGCTGACAGCAC 61.959 63.158 26.32 16.06 42.58 4.40



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.