Multiple sequence alignment - TraesCS3A01G413800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G413800 chr3A 100.000 4966 0 0 1 4966 657427642 657422677 0.000000e+00 9171.0
1 TraesCS3A01G413800 chr3A 88.274 452 44 4 1934 2377 657425440 657424990 2.630000e-147 532.0
2 TraesCS3A01G413800 chr3A 88.274 452 44 4 2203 2653 657425709 657425266 2.630000e-147 532.0
3 TraesCS3A01G413800 chr3A 96.875 128 4 0 1 128 593016793 593016666 1.080000e-51 215.0
4 TraesCS3A01G413800 chr3A 94.118 136 7 1 1 136 177473867 177473733 6.520000e-49 206.0
5 TraesCS3A01G413800 chr3A 94.017 117 7 0 4493 4609 221571547 221571431 1.420000e-40 178.0
6 TraesCS3A01G413800 chr3D 95.941 1700 34 7 129 1825 522776730 522775063 0.000000e+00 2724.0
7 TraesCS3A01G413800 chr3D 91.209 1638 89 14 1931 3541 522774984 522773375 0.000000e+00 2176.0
8 TraesCS3A01G413800 chr3D 89.508 1077 63 15 3541 4608 522773215 522772180 0.000000e+00 1317.0
9 TraesCS3A01G413800 chr3D 88.428 458 44 3 2196 2652 522774988 522774539 1.220000e-150 544.0
10 TraesCS3A01G413800 chr3D 86.918 451 52 3 1934 2377 522774712 522774262 2.670000e-137 499.0
11 TraesCS3A01G413800 chr3D 94.030 67 4 0 1809 1875 522775048 522774982 8.790000e-18 102.0
12 TraesCS3A01G413800 chr3B 95.768 1583 31 4 942 2520 688390972 688389422 0.000000e+00 2519.0
13 TraesCS3A01G413800 chr3B 97.280 1397 30 5 2528 3918 688386628 688385234 0.000000e+00 2362.0
14 TraesCS3A01G413800 chr3B 90.769 650 50 6 201 841 688392104 688391456 0.000000e+00 859.0
15 TraesCS3A01G413800 chr3B 90.559 286 25 2 2369 2653 688389849 688389565 1.300000e-100 377.0
16 TraesCS3A01G413800 chr3B 84.906 318 41 3 1934 2244 688389739 688389422 1.040000e-81 315.0
17 TraesCS3A01G413800 chr3B 96.063 127 5 0 2251 2377 688386629 688386503 1.810000e-49 207.0
18 TraesCS3A01G413800 chr3B 97.248 109 2 1 4858 4966 82848305 82848412 3.050000e-42 183.0
19 TraesCS3A01G413800 chr3B 94.118 119 4 3 4849 4966 581966213 581966329 1.420000e-40 178.0
20 TraesCS3A01G413800 chr3B 81.690 142 19 1 2203 2344 688389980 688389846 1.460000e-20 111.0
21 TraesCS3A01G413800 chr1A 97.656 128 3 0 1 128 16064001 16064128 2.330000e-53 220.0
22 TraesCS3A01G413800 chr1A 100.000 28 0 0 1906 1933 549012530 549012557 9.000000e-03 52.8
23 TraesCS3A01G413800 chr7A 95.556 135 6 0 1 135 94155676 94155542 3.010000e-52 217.0
24 TraesCS3A01G413800 chr7A 96.094 128 5 0 1 128 672112201 672112074 5.040000e-50 209.0
25 TraesCS3A01G413800 chr5A 96.875 128 4 0 1 128 681297487 681297360 1.080000e-51 215.0
26 TraesCS3A01G413800 chr5A 95.455 132 6 0 1 132 522936834 522936965 1.400000e-50 211.0
27 TraesCS3A01G413800 chr5A 97.297 111 2 1 4497 4606 397146005 397145895 2.360000e-43 187.0
28 TraesCS3A01G413800 chr5A 97.273 110 3 0 4498 4607 505508841 505508732 2.360000e-43 187.0
29 TraesCS3A01G413800 chr5A 97.248 109 3 0 4499 4607 169309775 169309883 8.490000e-43 185.0
30 TraesCS3A01G413800 chr2A 96.875 128 4 0 1 128 755866745 755866618 1.080000e-51 215.0
31 TraesCS3A01G413800 chr2A 96.094 128 5 0 1 128 770460362 770460235 5.040000e-50 209.0
32 TraesCS3A01G413800 chr2A 96.429 112 4 0 4500 4611 763687463 763687574 8.490000e-43 185.0
33 TraesCS3A01G413800 chr2A 94.783 115 6 0 4852 4966 2369452 2369566 3.950000e-41 180.0
34 TraesCS3A01G413800 chr2A 94.783 115 6 0 4852 4966 712720261 712720147 3.950000e-41 180.0
35 TraesCS3A01G413800 chr2A 92.683 123 8 1 4488 4610 753570306 753570185 5.110000e-40 176.0
36 TraesCS3A01G413800 chrUn 98.148 108 2 0 4500 4607 218481706 218481599 6.560000e-44 189.0
37 TraesCS3A01G413800 chr6A 97.297 111 3 0 4856 4966 116945385 116945495 6.560000e-44 189.0
38 TraesCS3A01G413800 chr6A 95.575 113 5 0 4854 4966 6860107 6859995 1.100000e-41 182.0
39 TraesCS3A01G413800 chr5D 97.297 111 2 1 4856 4966 308955691 308955800 2.360000e-43 187.0
40 TraesCS3A01G413800 chr7D 97.248 109 3 0 4499 4607 192932054 192932162 8.490000e-43 185.0
41 TraesCS3A01G413800 chr7D 96.396 111 4 0 4497 4607 419562331 419562441 3.050000e-42 183.0
42 TraesCS3A01G413800 chr7D 94.737 38 2 0 1896 1933 312186586 312186549 5.370000e-05 60.2
43 TraesCS3A01G413800 chr2D 97.273 110 2 1 4856 4965 148059690 148059582 8.490000e-43 185.0
44 TraesCS3A01G413800 chr1B 95.575 113 5 0 4854 4966 542711321 542711433 1.100000e-41 182.0
45 TraesCS3A01G413800 chr6B 95.495 111 3 2 4756 4865 271250356 271250247 5.110000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G413800 chr3A 657422677 657427642 4965 True 3411.666667 9171 92.182667 1 4966 3 chr3A.!!$R4 4965
1 TraesCS3A01G413800 chr3D 522772180 522776730 4550 True 1227.000000 2724 91.005667 129 4608 6 chr3D.!!$R1 4479
2 TraesCS3A01G413800 chr3B 688385234 688392104 6870 True 964.285714 2519 91.005000 201 3918 7 chr3B.!!$R1 3717


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.179045 CATGGGTCCCGATTCTGGTC 60.179 60.000 2.65 0.0 0.00 4.02 F
71 72 0.326618 ATGGGTCCCGATTCTGGTCT 60.327 55.000 2.65 0.0 0.00 3.85 F
199 200 0.394565 CTACTGATAGCTGCACCCCC 59.605 60.000 1.02 0.0 0.00 5.40 F
930 941 1.743252 GAAACGAGGCCCAGCTCAG 60.743 63.158 0.00 0.0 0.00 3.35 F
1433 1828 1.863267 GACGATCTGCTCAGGGATTG 58.137 55.000 0.00 0.0 0.00 2.67 F
3325 6581 1.186200 TCATCTCGGGACTTGAGGTG 58.814 55.000 0.00 0.0 44.27 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2030 2481 0.606401 CCCAGTTTCAGTGGCGTGAT 60.606 55.000 0.00 0.0 37.37 3.06 R
2075 2526 4.636206 GCAATACCAAAGTAGAGAACAGGG 59.364 45.833 0.00 0.0 0.00 4.45 R
2265 2716 4.852134 TGATTAGCAGCAGCAAGAAAAA 57.148 36.364 3.17 0.0 45.49 1.94 R
2738 5977 4.217550 GGCAAAATGGTTAGTCTGTAAGCA 59.782 41.667 0.00 0.0 38.94 3.91 R
3439 6695 1.073125 TGTGTATGTGGTTGGACCCTG 59.927 52.381 0.00 0.0 37.50 4.45 R
4860 8300 0.038744 TTCGGACGGAGGGAGTACTT 59.961 55.000 0.00 0.0 0.00 2.24 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.410400 CCCCTGGCCTCACGAACC 62.410 72.222 3.32 0.00 0.00 3.62
37 38 4.760047 CCCTGGCCTCACGAACCG 62.760 72.222 3.32 0.00 0.00 4.44
38 39 4.760047 CCTGGCCTCACGAACCGG 62.760 72.222 3.32 0.00 0.00 5.28
39 40 4.760047 CTGGCCTCACGAACCGGG 62.760 72.222 6.32 0.00 0.00 5.73
41 42 4.754667 GGCCTCACGAACCGGGAC 62.755 72.222 6.32 0.00 32.99 4.46
42 43 3.998672 GCCTCACGAACCGGGACA 61.999 66.667 6.32 0.00 32.99 4.02
43 44 2.261671 CCTCACGAACCGGGACAG 59.738 66.667 6.32 0.00 32.99 3.51
44 45 2.273179 CCTCACGAACCGGGACAGA 61.273 63.158 6.32 0.00 32.99 3.41
45 46 1.605058 CCTCACGAACCGGGACAGAT 61.605 60.000 6.32 0.00 32.99 2.90
46 47 0.458543 CTCACGAACCGGGACAGATG 60.459 60.000 6.32 0.00 32.99 2.90
47 48 1.447838 CACGAACCGGGACAGATGG 60.448 63.158 6.32 0.00 28.17 3.51
48 49 2.511600 CGAACCGGGACAGATGGC 60.512 66.667 6.32 0.00 0.00 4.40
49 50 2.124695 GAACCGGGACAGATGGCC 60.125 66.667 6.32 0.00 44.61 5.36
55 56 2.196776 GGACAGATGGCCCCATGG 59.803 66.667 4.14 4.14 37.19 3.66
57 58 2.618185 ACAGATGGCCCCATGGGT 60.618 61.111 29.33 11.05 46.51 4.51
64 65 3.820843 GCCCCATGGGTCCCGATT 61.821 66.667 29.33 0.00 46.51 3.34
65 66 2.515901 CCCCATGGGTCCCGATTC 59.484 66.667 29.33 0.00 38.25 2.52
66 67 2.078665 CCCCATGGGTCCCGATTCT 61.079 63.158 29.33 0.00 38.25 2.40
67 68 1.149174 CCCATGGGTCCCGATTCTG 59.851 63.158 23.93 0.00 0.00 3.02
68 69 1.149174 CCATGGGTCCCGATTCTGG 59.851 63.158 2.85 1.33 0.00 3.86
69 70 1.635817 CCATGGGTCCCGATTCTGGT 61.636 60.000 2.85 0.00 0.00 4.00
70 71 0.179045 CATGGGTCCCGATTCTGGTC 60.179 60.000 2.65 0.00 0.00 4.02
71 72 0.326618 ATGGGTCCCGATTCTGGTCT 60.327 55.000 2.65 0.00 0.00 3.85
72 73 1.264749 TGGGTCCCGATTCTGGTCTG 61.265 60.000 2.65 0.00 0.00 3.51
73 74 0.976073 GGGTCCCGATTCTGGTCTGA 60.976 60.000 0.00 0.00 0.00 3.27
74 75 0.902531 GGTCCCGATTCTGGTCTGAA 59.097 55.000 0.00 0.00 0.00 3.02
75 76 1.405661 GGTCCCGATTCTGGTCTGAAC 60.406 57.143 0.00 0.00 0.00 3.18
76 77 0.902531 TCCCGATTCTGGTCTGAACC 59.097 55.000 0.00 0.00 46.66 3.62
79 80 3.762528 CCGATTCTGGTCTGAACCGGG 62.763 61.905 13.49 0.00 46.42 5.73
86 87 2.311124 GGTCTGAACCGGGACTAATG 57.689 55.000 6.32 0.00 35.36 1.90
87 88 1.134491 GGTCTGAACCGGGACTAATGG 60.134 57.143 6.32 0.00 35.36 3.16
88 89 1.134491 GTCTGAACCGGGACTAATGGG 60.134 57.143 6.32 0.00 0.00 4.00
89 90 0.463833 CTGAACCGGGACTAATGGGC 60.464 60.000 6.32 0.00 0.00 5.36
90 91 1.153025 GAACCGGGACTAATGGGCC 60.153 63.158 6.32 0.00 44.23 5.80
96 97 3.080647 GGACTAATGGGCCACTTCG 57.919 57.895 9.28 3.56 44.40 3.79
97 98 0.463833 GGACTAATGGGCCACTTCGG 60.464 60.000 9.28 0.00 44.40 4.30
106 107 3.636231 CCACTTCGGCCTGGACCA 61.636 66.667 2.49 0.00 0.00 4.02
107 108 2.429930 CACTTCGGCCTGGACCAA 59.570 61.111 0.00 0.00 0.00 3.67
108 109 1.228124 CACTTCGGCCTGGACCAAA 60.228 57.895 0.00 0.00 0.00 3.28
109 110 1.073199 ACTTCGGCCTGGACCAAAG 59.927 57.895 0.00 2.51 0.00 2.77
110 111 2.282180 TTCGGCCTGGACCAAAGC 60.282 61.111 0.00 7.50 0.00 3.51
111 112 3.860930 TTCGGCCTGGACCAAAGCC 62.861 63.158 20.76 20.76 42.18 4.35
113 114 3.984732 GGCCTGGACCAAAGCCCT 61.985 66.667 20.24 0.00 39.60 5.19
114 115 2.677875 GCCTGGACCAAAGCCCTG 60.678 66.667 0.00 0.00 0.00 4.45
115 116 2.846532 CCTGGACCAAAGCCCTGT 59.153 61.111 0.00 0.00 0.00 4.00
116 117 1.153756 CCTGGACCAAAGCCCTGTT 59.846 57.895 0.00 0.00 0.00 3.16
117 118 0.469892 CCTGGACCAAAGCCCTGTTT 60.470 55.000 0.00 0.00 0.00 2.83
118 119 1.413118 CTGGACCAAAGCCCTGTTTT 58.587 50.000 0.00 0.00 0.00 2.43
119 120 1.341209 CTGGACCAAAGCCCTGTTTTC 59.659 52.381 0.00 0.00 0.00 2.29
120 121 1.063266 TGGACCAAAGCCCTGTTTTCT 60.063 47.619 0.00 0.00 0.00 2.52
121 122 2.175931 TGGACCAAAGCCCTGTTTTCTA 59.824 45.455 0.00 0.00 0.00 2.10
122 123 3.181423 TGGACCAAAGCCCTGTTTTCTAT 60.181 43.478 0.00 0.00 0.00 1.98
123 124 3.832490 GGACCAAAGCCCTGTTTTCTATT 59.168 43.478 0.00 0.00 0.00 1.73
124 125 5.014202 GGACCAAAGCCCTGTTTTCTATTA 58.986 41.667 0.00 0.00 0.00 0.98
125 126 5.125578 GGACCAAAGCCCTGTTTTCTATTAG 59.874 44.000 0.00 0.00 0.00 1.73
126 127 5.641155 ACCAAAGCCCTGTTTTCTATTAGT 58.359 37.500 0.00 0.00 0.00 2.24
127 128 5.476945 ACCAAAGCCCTGTTTTCTATTAGTG 59.523 40.000 0.00 0.00 0.00 2.74
177 178 6.253727 CACAACATCAACTCTATCTTACGACC 59.746 42.308 0.00 0.00 0.00 4.79
199 200 0.394565 CTACTGATAGCTGCACCCCC 59.605 60.000 1.02 0.00 0.00 5.40
242 243 3.641436 TGTGGACCTGCTCGATAATGTAT 59.359 43.478 0.00 0.00 0.00 2.29
278 279 6.547880 TGCTAAAAGGTCAATTTGGAACACTA 59.452 34.615 0.00 0.00 39.29 2.74
436 438 7.790782 AATACATGGGTTTTTAGTGGTGAAT 57.209 32.000 0.00 0.00 0.00 2.57
543 548 9.580916 GCACATGTGTAGTATAAATTCGTATTG 57.419 33.333 26.01 0.00 0.00 1.90
689 697 3.262778 TACCTCGCCCCTCCCCTTT 62.263 63.158 0.00 0.00 0.00 3.11
762 770 6.116126 AGCTCAACAACTAGAACTTGTTCTT 58.884 36.000 19.28 2.08 39.34 2.52
764 772 6.511929 GCTCAACAACTAGAACTTGTTCTTCC 60.512 42.308 19.28 0.00 39.34 3.46
930 941 1.743252 GAAACGAGGCCCAGCTCAG 60.743 63.158 0.00 0.00 0.00 3.35
1262 1656 2.656002 CCAGATCTACCAGGTCTTCGA 58.344 52.381 0.00 0.00 0.00 3.71
1433 1828 1.863267 GACGATCTGCTCAGGGATTG 58.137 55.000 0.00 0.00 0.00 2.67
1547 1945 7.178274 AGGGTGATAGAAGATGTATCTGATCAC 59.822 40.741 21.89 21.89 43.22 3.06
1564 1962 2.594303 CACCCAGCACGAAAGCCA 60.594 61.111 0.00 0.00 34.23 4.75
1570 1968 2.560504 CCAGCACGAAAGCCATATACA 58.439 47.619 0.00 0.00 34.23 2.29
1640 2060 8.193953 ACAAAAGACATTTCAAGGTATTCCAT 57.806 30.769 0.00 0.00 35.89 3.41
1641 2061 8.650490 ACAAAAGACATTTCAAGGTATTCCATT 58.350 29.630 0.00 0.00 35.89 3.16
1642 2062 8.928733 CAAAAGACATTTCAAGGTATTCCATTG 58.071 33.333 0.00 0.00 35.89 2.82
1643 2063 7.781324 AAGACATTTCAAGGTATTCCATTGT 57.219 32.000 0.00 0.00 35.89 2.71
1644 2064 8.877864 AAGACATTTCAAGGTATTCCATTGTA 57.122 30.769 0.00 0.00 35.89 2.41
1645 2065 8.877864 AGACATTTCAAGGTATTCCATTGTAA 57.122 30.769 0.00 0.00 35.89 2.41
1646 2066 9.308000 AGACATTTCAAGGTATTCCATTGTAAA 57.692 29.630 0.00 0.00 35.89 2.01
1653 2073 9.627123 TCAAGGTATTCCATTGTAAATAGAAGG 57.373 33.333 0.00 0.00 35.89 3.46
1654 2074 9.408648 CAAGGTATTCCATTGTAAATAGAAGGT 57.591 33.333 0.00 0.00 35.89 3.50
1655 2075 9.990868 AAGGTATTCCATTGTAAATAGAAGGTT 57.009 29.630 0.00 0.00 35.89 3.50
1660 2080 9.628500 ATTCCATTGTAAATAGAAGGTTAGTCC 57.372 33.333 0.00 0.00 0.00 3.85
1661 2081 8.153221 TCCATTGTAAATAGAAGGTTAGTCCA 57.847 34.615 0.00 0.00 39.02 4.02
1735 2155 2.758327 TGACGCATACCTCCGCCT 60.758 61.111 0.00 0.00 0.00 5.52
1865 2316 2.684881 CACTGTTTTGGCTCTTCACACT 59.315 45.455 0.00 0.00 0.00 3.55
1908 2359 2.813172 TGATCATTTCAAAGCTGCGACA 59.187 40.909 0.00 0.00 0.00 4.35
1914 2365 4.404507 TTTCAAAGCTGCGACACTTATC 57.595 40.909 0.00 0.00 0.00 1.75
1921 2372 2.541762 GCTGCGACACTTATCTTGGATC 59.458 50.000 0.00 0.00 0.00 3.36
2057 2508 4.523083 GCCACTGAAACTGGGATTACATA 58.477 43.478 0.00 0.00 0.00 2.29
2265 2716 7.607991 CAGATAAATTTAGTGTGAGTTGGACCT 59.392 37.037 3.94 0.00 0.00 3.85
2291 2742 4.011698 TCTTGCTGCTGCTAATCATTCAA 58.988 39.130 17.00 0.00 40.48 2.69
2690 5927 6.074648 TGATTATTGTTGGAACTTTCTGGGT 58.925 36.000 0.00 0.00 0.00 4.51
2978 6222 6.383415 AGAGTCACGATTAGTTGAGAGTTTC 58.617 40.000 0.00 0.00 0.00 2.78
2981 6225 5.346281 GTCACGATTAGTTGAGAGTTTCAGG 59.654 44.000 0.00 0.00 37.07 3.86
2983 6227 4.021016 ACGATTAGTTGAGAGTTTCAGGCT 60.021 41.667 0.00 0.00 37.07 4.58
3112 6356 7.295952 AGCATGTTTCTGTCTATACTTTTCG 57.704 36.000 0.00 0.00 0.00 3.46
3325 6581 1.186200 TCATCTCGGGACTTGAGGTG 58.814 55.000 0.00 0.00 44.27 4.00
3439 6695 5.009610 ACACCAAAAACATCATCACCTGTAC 59.990 40.000 0.00 0.00 0.00 2.90
3440 6696 5.009510 CACCAAAAACATCATCACCTGTACA 59.990 40.000 0.00 0.00 0.00 2.90
3466 6725 1.080638 AACCACATACACACCCCCAT 58.919 50.000 0.00 0.00 0.00 4.00
3726 7155 5.687285 GGTTTCAACTAGTTGCTTTGTCATG 59.313 40.000 27.49 4.25 40.24 3.07
3768 7197 1.336125 GCCTTGGCTGATGTATGCTTC 59.664 52.381 4.11 0.00 0.00 3.86
3776 7205 3.681034 GCTGATGTATGCTTCACACCTCT 60.681 47.826 0.00 0.00 0.00 3.69
3808 7237 9.744468 ACCAAGTTGTTATAACTTTGTTGAATC 57.256 29.630 16.33 0.00 38.32 2.52
3817 7246 3.565307 ACTTTGTTGAATCCAAGAGGCA 58.435 40.909 0.00 0.00 32.06 4.75
3827 7256 0.744874 CCAAGAGGCAATGCTCATGG 59.255 55.000 4.82 9.50 33.13 3.66
3856 7285 8.970691 ATCATGTTCAGTTTATAAAACAGCAC 57.029 30.769 0.00 0.00 35.30 4.40
3978 7407 4.099419 GGTGGTGTTTCAAGGAGATGTTTT 59.901 41.667 0.00 0.00 0.00 2.43
3995 7424 5.127693 TGTTTTCATATTCCGGTTGGTTG 57.872 39.130 0.00 0.00 36.30 3.77
4001 7430 5.013547 TCATATTCCGGTTGGTTGTTTGAT 58.986 37.500 0.00 0.00 36.30 2.57
4003 7432 0.671251 TCCGGTTGGTTGTTTGATGC 59.329 50.000 0.00 0.00 36.30 3.91
4016 7445 3.126858 TGTTTGATGCGCCATTCTAAGTC 59.873 43.478 4.18 0.00 0.00 3.01
4018 7447 1.136110 TGATGCGCCATTCTAAGTCGA 59.864 47.619 4.18 0.00 0.00 4.20
4074 7503 3.240670 TGGTGAGACCAGTGAAGGT 57.759 52.632 0.00 0.00 44.79 3.50
4082 7511 6.465084 GTGAGACCAGTGAAGGTAGTTATTT 58.535 40.000 0.00 0.00 43.38 1.40
4113 7542 3.499737 CGTCGCCATTGACCAGCC 61.500 66.667 0.00 0.00 35.40 4.85
4121 7550 0.169672 CATTGACCAGCCTTTCAGCG 59.830 55.000 0.00 0.00 38.01 5.18
4140 7569 3.892588 AGCGGAAGGGTGAAAATTGTTTA 59.107 39.130 0.00 0.00 0.00 2.01
4141 7570 3.985279 GCGGAAGGGTGAAAATTGTTTAC 59.015 43.478 0.00 0.00 0.00 2.01
4142 7571 4.261867 GCGGAAGGGTGAAAATTGTTTACT 60.262 41.667 0.00 0.00 0.00 2.24
4143 7572 5.048573 GCGGAAGGGTGAAAATTGTTTACTA 60.049 40.000 0.00 0.00 0.00 1.82
4144 7573 6.376177 CGGAAGGGTGAAAATTGTTTACTAC 58.624 40.000 0.00 0.00 0.00 2.73
4145 7574 6.206048 CGGAAGGGTGAAAATTGTTTACTACT 59.794 38.462 0.00 0.00 0.00 2.57
4146 7575 7.368059 GGAAGGGTGAAAATTGTTTACTACTG 58.632 38.462 0.00 0.00 0.00 2.74
4147 7576 7.013942 GGAAGGGTGAAAATTGTTTACTACTGT 59.986 37.037 0.00 0.00 0.00 3.55
4148 7577 8.983702 AAGGGTGAAAATTGTTTACTACTGTA 57.016 30.769 0.00 0.00 0.00 2.74
4149 7578 8.617290 AGGGTGAAAATTGTTTACTACTGTAG 57.383 34.615 13.13 13.13 0.00 2.74
4150 7579 8.215736 AGGGTGAAAATTGTTTACTACTGTAGT 58.784 33.333 22.72 22.72 42.68 2.73
4151 7580 9.492973 GGGTGAAAATTGTTTACTACTGTAGTA 57.507 33.333 20.74 20.74 40.14 1.82
4183 7614 9.874205 TCACAAAAGAAAATGTCTTCAAAGATT 57.126 25.926 0.00 0.00 46.36 2.40
4188 7619 6.808829 AGAAAATGTCTTCAAAGATTGCACA 58.191 32.000 0.00 0.00 37.39 4.57
4214 7645 7.442364 ACTTCATGCTACGATTATTAAGCACAT 59.558 33.333 0.00 0.00 46.84 3.21
4220 7651 7.929245 TGCTACGATTATTAAGCACATCCTTTA 59.071 33.333 0.00 0.00 39.92 1.85
4276 7710 6.638610 ACTCAACAGAGAGATAAACCATCTG 58.361 40.000 0.00 0.00 44.41 2.90
4300 7734 1.683385 GACAAGCCAAAAACAGCTCCT 59.317 47.619 0.00 0.00 38.74 3.69
4302 7736 2.501316 ACAAGCCAAAAACAGCTCCTTT 59.499 40.909 0.00 0.00 38.74 3.11
4303 7737 3.126073 CAAGCCAAAAACAGCTCCTTTC 58.874 45.455 0.00 0.00 38.74 2.62
4304 7738 2.670939 AGCCAAAAACAGCTCCTTTCT 58.329 42.857 0.00 0.00 32.71 2.52
4305 7739 2.363359 AGCCAAAAACAGCTCCTTTCTG 59.637 45.455 0.00 0.00 32.71 3.02
4306 7740 2.747436 CCAAAAACAGCTCCTTTCTGC 58.253 47.619 0.00 0.00 35.04 4.26
4307 7741 2.101249 CCAAAAACAGCTCCTTTCTGCA 59.899 45.455 0.00 0.00 35.04 4.41
4308 7742 3.378339 CAAAAACAGCTCCTTTCTGCAG 58.622 45.455 7.63 7.63 35.04 4.41
4309 7743 2.645838 AAACAGCTCCTTTCTGCAGA 57.354 45.000 13.74 13.74 35.04 4.26
4310 7744 2.645838 AACAGCTCCTTTCTGCAGAA 57.354 45.000 25.16 25.16 35.04 3.02
4319 7753 1.060266 CTTTCTGCAGAATCGCTCGTG 59.940 52.381 28.89 8.85 33.54 4.35
4334 7768 1.001924 CTCGTGCGCTACATCTGATCT 60.002 52.381 9.73 0.00 0.00 2.75
4338 7772 3.249091 GTGCGCTACATCTGATCTATGG 58.751 50.000 9.73 0.00 0.00 2.74
4339 7773 2.893489 TGCGCTACATCTGATCTATGGT 59.107 45.455 9.73 1.12 0.00 3.55
4344 7778 5.622460 CGCTACATCTGATCTATGGTTACCC 60.622 48.000 0.00 0.00 0.00 3.69
4355 7789 6.409524 TCTATGGTTACCCTAATAACACGG 57.590 41.667 0.00 0.00 36.87 4.94
4362 7796 1.333619 CCCTAATAACACGGTGCATGC 59.666 52.381 11.82 11.82 0.00 4.06
4397 7831 5.936686 ACACATTCACTCAACTCTGATTG 57.063 39.130 0.00 0.00 34.39 2.67
4398 7832 5.614308 ACACATTCACTCAACTCTGATTGA 58.386 37.500 0.00 0.00 38.93 2.57
4399 7833 6.236409 ACACATTCACTCAACTCTGATTGAT 58.764 36.000 0.00 0.00 39.99 2.57
4400 7834 6.148976 ACACATTCACTCAACTCTGATTGATG 59.851 38.462 0.00 1.77 39.99 3.07
4401 7835 5.123502 ACATTCACTCAACTCTGATTGATGC 59.876 40.000 0.00 0.00 39.99 3.91
4402 7836 4.276058 TCACTCAACTCTGATTGATGCA 57.724 40.909 0.00 0.00 36.59 3.96
4403 7837 4.644498 TCACTCAACTCTGATTGATGCAA 58.356 39.130 0.00 0.00 36.59 4.08
4404 7838 4.694037 TCACTCAACTCTGATTGATGCAAG 59.306 41.667 0.00 0.00 36.59 4.01
4423 7857 4.580167 GCAAGAGCAATCCAATACCATGTA 59.420 41.667 0.00 0.00 41.58 2.29
4438 7872 1.067821 CATGTACTCGCTCTTCCTCCC 59.932 57.143 0.00 0.00 0.00 4.30
4452 7886 0.839853 CCTCCCTCCCATCCATCTCC 60.840 65.000 0.00 0.00 0.00 3.71
4468 7902 7.131907 TCCATCTCCGATTAAACCATCTAAA 57.868 36.000 0.00 0.00 0.00 1.85
4469 7903 7.217200 TCCATCTCCGATTAAACCATCTAAAG 58.783 38.462 0.00 0.00 0.00 1.85
4471 7905 7.715249 CCATCTCCGATTAAACCATCTAAAGAA 59.285 37.037 0.00 0.00 0.00 2.52
4472 7906 8.552034 CATCTCCGATTAAACCATCTAAAGAAC 58.448 37.037 0.00 0.00 0.00 3.01
4474 7908 8.319146 TCTCCGATTAAACCATCTAAAGAACTT 58.681 33.333 0.00 0.00 0.00 2.66
4476 7916 9.374838 TCCGATTAAACCATCTAAAGAACTTAC 57.625 33.333 0.00 0.00 0.00 2.34
4493 7933 8.196378 AGAACTTACTCAAGACTAAACCATCT 57.804 34.615 0.00 0.00 35.60 2.90
4494 7934 9.310449 AGAACTTACTCAAGACTAAACCATCTA 57.690 33.333 0.00 0.00 35.60 1.98
4495 7935 9.356433 GAACTTACTCAAGACTAAACCATCTAC 57.644 37.037 0.00 0.00 35.60 2.59
4496 7936 8.653036 ACTTACTCAAGACTAAACCATCTACT 57.347 34.615 0.00 0.00 35.60 2.57
4497 7937 9.750783 ACTTACTCAAGACTAAACCATCTACTA 57.249 33.333 0.00 0.00 35.60 1.82
4513 7953 2.433662 ACTAGTACTCCCTCCGTTCC 57.566 55.000 0.00 0.00 0.00 3.62
4514 7954 1.637553 ACTAGTACTCCCTCCGTTCCA 59.362 52.381 0.00 0.00 0.00 3.53
4524 7964 2.163613 CCCTCCGTTCCAAATTACTTGC 59.836 50.000 0.00 0.00 33.27 4.01
4526 7966 1.807742 TCCGTTCCAAATTACTTGCCG 59.192 47.619 0.00 0.00 33.27 5.69
4527 7967 1.538075 CCGTTCCAAATTACTTGCCGT 59.462 47.619 0.00 0.00 33.27 5.68
4528 7968 2.743126 CCGTTCCAAATTACTTGCCGTA 59.257 45.455 0.00 0.00 33.27 4.02
4582 8022 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
4612 8052 4.750021 GGAACGGAGGGAGTACTAAAAT 57.250 45.455 0.00 0.00 0.00 1.82
4613 8053 5.095145 GGAACGGAGGGAGTACTAAAATT 57.905 43.478 0.00 0.00 0.00 1.82
4614 8054 5.494724 GGAACGGAGGGAGTACTAAAATTT 58.505 41.667 0.00 0.00 0.00 1.82
4615 8055 6.643388 GGAACGGAGGGAGTACTAAAATTTA 58.357 40.000 0.00 0.00 0.00 1.40
4616 8056 7.278135 GGAACGGAGGGAGTACTAAAATTTAT 58.722 38.462 0.00 0.00 0.00 1.40
4617 8057 7.440556 GGAACGGAGGGAGTACTAAAATTTATC 59.559 40.741 0.00 0.00 0.00 1.75
4618 8058 6.510536 ACGGAGGGAGTACTAAAATTTATCG 58.489 40.000 0.00 0.00 0.00 2.92
4619 8059 5.924825 CGGAGGGAGTACTAAAATTTATCGG 59.075 44.000 0.00 0.00 0.00 4.18
4620 8060 6.462067 CGGAGGGAGTACTAAAATTTATCGGT 60.462 42.308 0.00 0.00 0.00 4.69
4621 8061 7.278135 GGAGGGAGTACTAAAATTTATCGGTT 58.722 38.462 0.00 0.00 0.00 4.44
4622 8062 7.772292 GGAGGGAGTACTAAAATTTATCGGTTT 59.228 37.037 0.00 0.00 0.00 3.27
4623 8063 9.170734 GAGGGAGTACTAAAATTTATCGGTTTT 57.829 33.333 0.00 0.00 0.00 2.43
4631 8071 9.227777 ACTAAAATTTATCGGTTTTACTGAGCT 57.772 29.630 0.00 0.00 36.85 4.09
4635 8075 8.788325 AATTTATCGGTTTTACTGAGCTAAGT 57.212 30.769 9.24 9.24 36.85 2.24
4636 8076 8.788325 ATTTATCGGTTTTACTGAGCTAAGTT 57.212 30.769 9.63 0.00 36.85 2.66
4637 8077 8.611654 TTTATCGGTTTTACTGAGCTAAGTTT 57.388 30.769 9.63 0.00 36.85 2.66
4638 8078 8.611654 TTATCGGTTTTACTGAGCTAAGTTTT 57.388 30.769 9.63 0.00 36.85 2.43
4639 8079 9.709495 TTATCGGTTTTACTGAGCTAAGTTTTA 57.291 29.630 9.63 0.00 36.85 1.52
4640 8080 8.611654 ATCGGTTTTACTGAGCTAAGTTTTAA 57.388 30.769 9.63 0.00 36.85 1.52
4641 8081 8.436046 TCGGTTTTACTGAGCTAAGTTTTAAA 57.564 30.769 9.63 0.99 0.00 1.52
4642 8082 9.059260 TCGGTTTTACTGAGCTAAGTTTTAAAT 57.941 29.630 9.63 0.00 0.00 1.40
4650 8090 7.760340 ACTGAGCTAAGTTTTAAATAGGTCTCG 59.240 37.037 19.55 14.97 42.05 4.04
4651 8091 7.609056 TGAGCTAAGTTTTAAATAGGTCTCGT 58.391 34.615 19.55 0.00 42.05 4.18
4652 8092 8.092687 TGAGCTAAGTTTTAAATAGGTCTCGTT 58.907 33.333 19.55 0.00 42.05 3.85
4653 8093 8.476657 AGCTAAGTTTTAAATAGGTCTCGTTC 57.523 34.615 0.00 0.00 0.00 3.95
4654 8094 8.092687 AGCTAAGTTTTAAATAGGTCTCGTTCA 58.907 33.333 0.00 0.00 0.00 3.18
4655 8095 8.167345 GCTAAGTTTTAAATAGGTCTCGTTCAC 58.833 37.037 0.00 0.00 0.00 3.18
4656 8096 7.430992 AAGTTTTAAATAGGTCTCGTTCACC 57.569 36.000 0.00 0.00 0.00 4.02
4657 8097 6.766429 AGTTTTAAATAGGTCTCGTTCACCT 58.234 36.000 7.65 7.65 46.60 4.00
4658 8098 7.222161 AGTTTTAAATAGGTCTCGTTCACCTT 58.778 34.615 7.80 0.00 41.95 3.50
4659 8099 7.718314 AGTTTTAAATAGGTCTCGTTCACCTTT 59.282 33.333 7.80 1.71 41.95 3.11
4660 8100 8.347771 GTTTTAAATAGGTCTCGTTCACCTTTT 58.652 33.333 7.80 9.91 41.95 2.27
4661 8101 8.454570 TTTAAATAGGTCTCGTTCACCTTTTT 57.545 30.769 16.35 16.35 41.95 1.94
4662 8102 9.558396 TTTAAATAGGTCTCGTTCACCTTTTTA 57.442 29.630 15.07 15.07 41.95 1.52
4663 8103 7.668525 AAATAGGTCTCGTTCACCTTTTTAG 57.331 36.000 12.97 0.00 41.95 1.85
4664 8104 3.400255 AGGTCTCGTTCACCTTTTTAGC 58.600 45.455 0.00 0.00 41.95 3.09
4665 8105 2.483106 GGTCTCGTTCACCTTTTTAGCC 59.517 50.000 0.00 0.00 0.00 3.93
4666 8106 3.135994 GTCTCGTTCACCTTTTTAGCCA 58.864 45.455 0.00 0.00 0.00 4.75
4667 8107 3.751698 GTCTCGTTCACCTTTTTAGCCAT 59.248 43.478 0.00 0.00 0.00 4.40
4668 8108 4.000988 TCTCGTTCACCTTTTTAGCCATC 58.999 43.478 0.00 0.00 0.00 3.51
4669 8109 3.078837 TCGTTCACCTTTTTAGCCATCC 58.921 45.455 0.00 0.00 0.00 3.51
4670 8110 2.159572 CGTTCACCTTTTTAGCCATCCG 60.160 50.000 0.00 0.00 0.00 4.18
4671 8111 3.078837 GTTCACCTTTTTAGCCATCCGA 58.921 45.455 0.00 0.00 0.00 4.55
4672 8112 3.644966 TCACCTTTTTAGCCATCCGAT 57.355 42.857 0.00 0.00 0.00 4.18
4673 8113 3.541632 TCACCTTTTTAGCCATCCGATC 58.458 45.455 0.00 0.00 0.00 3.69
4674 8114 3.054728 TCACCTTTTTAGCCATCCGATCA 60.055 43.478 0.00 0.00 0.00 2.92
4675 8115 3.885297 CACCTTTTTAGCCATCCGATCAT 59.115 43.478 0.00 0.00 0.00 2.45
4676 8116 4.023707 CACCTTTTTAGCCATCCGATCATC 60.024 45.833 0.00 0.00 0.00 2.92
4677 8117 4.136796 CCTTTTTAGCCATCCGATCATCA 58.863 43.478 0.00 0.00 0.00 3.07
4678 8118 4.023707 CCTTTTTAGCCATCCGATCATCAC 60.024 45.833 0.00 0.00 0.00 3.06
4679 8119 3.836365 TTTAGCCATCCGATCATCACA 57.164 42.857 0.00 0.00 0.00 3.58
4680 8120 2.820059 TAGCCATCCGATCATCACAC 57.180 50.000 0.00 0.00 0.00 3.82
4681 8121 0.249615 AGCCATCCGATCATCACACG 60.250 55.000 0.00 0.00 0.00 4.49
4682 8122 1.835483 GCCATCCGATCATCACACGC 61.835 60.000 0.00 0.00 0.00 5.34
4683 8123 1.224069 CCATCCGATCATCACACGCC 61.224 60.000 0.00 0.00 0.00 5.68
4684 8124 0.530431 CATCCGATCATCACACGCCA 60.530 55.000 0.00 0.00 0.00 5.69
4685 8125 0.177836 ATCCGATCATCACACGCCAA 59.822 50.000 0.00 0.00 0.00 4.52
4686 8126 0.460109 TCCGATCATCACACGCCAAG 60.460 55.000 0.00 0.00 0.00 3.61
4687 8127 0.460109 CCGATCATCACACGCCAAGA 60.460 55.000 0.00 0.00 0.00 3.02
4688 8128 1.575244 CGATCATCACACGCCAAGAT 58.425 50.000 0.00 0.00 0.00 2.40
4689 8129 1.935873 CGATCATCACACGCCAAGATT 59.064 47.619 0.00 0.00 0.00 2.40
4690 8130 3.123050 CGATCATCACACGCCAAGATTA 58.877 45.455 0.00 0.00 0.00 1.75
4691 8131 3.183172 CGATCATCACACGCCAAGATTAG 59.817 47.826 0.00 0.00 0.00 1.73
4692 8132 3.610040 TCATCACACGCCAAGATTAGT 57.390 42.857 0.00 0.00 0.00 2.24
4693 8133 4.729227 TCATCACACGCCAAGATTAGTA 57.271 40.909 0.00 0.00 0.00 1.82
4694 8134 4.430007 TCATCACACGCCAAGATTAGTAC 58.570 43.478 0.00 0.00 0.00 2.73
4695 8135 4.159693 TCATCACACGCCAAGATTAGTACT 59.840 41.667 0.00 0.00 0.00 2.73
4696 8136 5.358725 TCATCACACGCCAAGATTAGTACTA 59.641 40.000 0.00 0.00 0.00 1.82
4697 8137 5.244785 TCACACGCCAAGATTAGTACTAG 57.755 43.478 2.23 0.00 0.00 2.57
4698 8138 3.797256 CACACGCCAAGATTAGTACTAGC 59.203 47.826 2.23 1.31 0.00 3.42
4699 8139 3.043586 CACGCCAAGATTAGTACTAGCG 58.956 50.000 22.78 22.78 42.09 4.26
4700 8140 2.686915 ACGCCAAGATTAGTACTAGCGT 59.313 45.455 23.80 23.80 43.38 5.07
4701 8141 3.129988 ACGCCAAGATTAGTACTAGCGTT 59.870 43.478 23.80 13.12 44.67 4.84
4702 8142 4.110482 CGCCAAGATTAGTACTAGCGTTT 58.890 43.478 18.56 5.04 36.35 3.60
4703 8143 4.565564 CGCCAAGATTAGTACTAGCGTTTT 59.434 41.667 18.56 3.88 36.35 2.43
4704 8144 5.063060 CGCCAAGATTAGTACTAGCGTTTTT 59.937 40.000 18.56 2.53 36.35 1.94
4754 8194 9.801873 TTTTTCTTTTTGAGTGGTGAAGATTAG 57.198 29.630 0.00 0.00 0.00 1.73
4755 8195 8.519799 TTTCTTTTTGAGTGGTGAAGATTAGT 57.480 30.769 0.00 0.00 0.00 2.24
4756 8196 8.519799 TTCTTTTTGAGTGGTGAAGATTAGTT 57.480 30.769 0.00 0.00 0.00 2.24
4757 8197 8.519799 TCTTTTTGAGTGGTGAAGATTAGTTT 57.480 30.769 0.00 0.00 0.00 2.66
4758 8198 8.966868 TCTTTTTGAGTGGTGAAGATTAGTTTT 58.033 29.630 0.00 0.00 0.00 2.43
4759 8199 9.586435 CTTTTTGAGTGGTGAAGATTAGTTTTT 57.414 29.630 0.00 0.00 0.00 1.94
4784 8224 8.442605 TTTTTAGTAACAGCATGCGTTTATTC 57.557 30.769 25.17 16.08 42.53 1.75
4785 8225 6.729391 TTAGTAACAGCATGCGTTTATTCA 57.271 33.333 25.17 10.49 42.53 2.57
4786 8226 5.621197 AGTAACAGCATGCGTTTATTCAA 57.379 34.783 25.17 9.94 42.53 2.69
4787 8227 6.007936 AGTAACAGCATGCGTTTATTCAAA 57.992 33.333 25.17 9.38 42.53 2.69
4788 8228 6.086222 AGTAACAGCATGCGTTTATTCAAAG 58.914 36.000 25.17 5.03 42.53 2.77
4789 8229 4.503741 ACAGCATGCGTTTATTCAAAGT 57.496 36.364 13.01 0.00 42.53 2.66
4790 8230 4.870363 ACAGCATGCGTTTATTCAAAGTT 58.130 34.783 13.01 0.00 42.53 2.66
4791 8231 4.917415 ACAGCATGCGTTTATTCAAAGTTC 59.083 37.500 13.01 0.00 42.53 3.01
4792 8232 4.916831 CAGCATGCGTTTATTCAAAGTTCA 59.083 37.500 13.01 0.00 0.00 3.18
4793 8233 5.574055 CAGCATGCGTTTATTCAAAGTTCAT 59.426 36.000 13.01 0.00 0.00 2.57
4794 8234 6.746822 CAGCATGCGTTTATTCAAAGTTCATA 59.253 34.615 13.01 0.00 0.00 2.15
4795 8235 7.273164 CAGCATGCGTTTATTCAAAGTTCATAA 59.727 33.333 13.01 0.00 0.00 1.90
4796 8236 7.812191 AGCATGCGTTTATTCAAAGTTCATAAA 59.188 29.630 13.01 0.00 0.00 1.40
4797 8237 8.431593 GCATGCGTTTATTCAAAGTTCATAAAA 58.568 29.630 0.00 0.00 0.00 1.52
4800 8240 8.473016 TGCGTTTATTCAAAGTTCATAAAAACG 58.527 29.630 15.44 15.44 45.49 3.60
4801 8241 8.683774 GCGTTTATTCAAAGTTCATAAAAACGA 58.316 29.630 20.36 0.00 45.54 3.85
4804 8244 9.685828 TTTATTCAAAGTTCATAAAAACGAGGG 57.314 29.630 0.00 0.00 34.27 4.30
4805 8245 6.945938 TTCAAAGTTCATAAAAACGAGGGA 57.054 33.333 0.00 0.00 34.27 4.20
4806 8246 7.519032 TTCAAAGTTCATAAAAACGAGGGAT 57.481 32.000 0.00 0.00 34.27 3.85
4807 8247 8.624367 TTCAAAGTTCATAAAAACGAGGGATA 57.376 30.769 0.00 0.00 34.27 2.59
4808 8248 8.036273 TCAAAGTTCATAAAAACGAGGGATAC 57.964 34.615 0.00 0.00 34.27 2.24
4809 8249 7.662258 TCAAAGTTCATAAAAACGAGGGATACA 59.338 33.333 0.00 0.00 34.03 2.29
4810 8250 7.989416 AAGTTCATAAAAACGAGGGATACAA 57.011 32.000 0.00 0.00 34.03 2.41
4811 8251 7.989416 AGTTCATAAAAACGAGGGATACAAA 57.011 32.000 0.00 0.00 34.03 2.83
4812 8252 8.040716 AGTTCATAAAAACGAGGGATACAAAG 57.959 34.615 0.00 0.00 34.03 2.77
4813 8253 6.995511 TCATAAAAACGAGGGATACAAAGG 57.004 37.500 0.00 0.00 39.74 3.11
4814 8254 6.478129 TCATAAAAACGAGGGATACAAAGGT 58.522 36.000 0.00 0.00 39.74 3.50
4815 8255 6.373216 TCATAAAAACGAGGGATACAAAGGTG 59.627 38.462 0.00 0.00 39.74 4.00
4816 8256 4.360951 AAAACGAGGGATACAAAGGTGA 57.639 40.909 0.00 0.00 39.74 4.02
4817 8257 3.611766 AACGAGGGATACAAAGGTGAG 57.388 47.619 0.00 0.00 39.74 3.51
4818 8258 1.207329 ACGAGGGATACAAAGGTGAGC 59.793 52.381 0.00 0.00 39.74 4.26
4819 8259 1.482593 CGAGGGATACAAAGGTGAGCT 59.517 52.381 0.00 0.00 39.74 4.09
4820 8260 2.739932 CGAGGGATACAAAGGTGAGCTG 60.740 54.545 0.00 0.00 39.74 4.24
4821 8261 1.561542 AGGGATACAAAGGTGAGCTGG 59.438 52.381 0.00 0.00 39.74 4.85
4822 8262 1.282157 GGGATACAAAGGTGAGCTGGT 59.718 52.381 0.00 0.00 39.74 4.00
4823 8263 2.359900 GGATACAAAGGTGAGCTGGTG 58.640 52.381 0.00 0.00 0.00 4.17
4824 8264 2.359900 GATACAAAGGTGAGCTGGTGG 58.640 52.381 0.00 0.00 0.00 4.61
4825 8265 1.429930 TACAAAGGTGAGCTGGTGGA 58.570 50.000 0.00 0.00 0.00 4.02
4826 8266 0.773644 ACAAAGGTGAGCTGGTGGAT 59.226 50.000 0.00 0.00 0.00 3.41
4827 8267 1.271597 ACAAAGGTGAGCTGGTGGATC 60.272 52.381 0.00 0.00 0.00 3.36
4828 8268 1.067295 AAAGGTGAGCTGGTGGATCA 58.933 50.000 0.00 0.00 38.09 2.92
4829 8269 1.293062 AAGGTGAGCTGGTGGATCAT 58.707 50.000 0.00 0.00 42.56 2.45
4830 8270 0.835941 AGGTGAGCTGGTGGATCATC 59.164 55.000 0.00 0.00 42.56 2.92
4831 8271 0.179034 GGTGAGCTGGTGGATCATCC 60.179 60.000 0.00 0.00 42.56 3.51
4832 8272 0.543277 GTGAGCTGGTGGATCATCCA 59.457 55.000 0.66 0.66 45.98 3.41
4841 8281 2.832643 TGGATCATCCAGCCAAACAT 57.167 45.000 0.66 0.00 42.67 2.71
4842 8282 2.380941 TGGATCATCCAGCCAAACATG 58.619 47.619 0.66 0.00 42.67 3.21
4843 8283 1.068127 GGATCATCCAGCCAAACATGC 59.932 52.381 0.00 0.00 36.28 4.06
4844 8284 1.068127 GATCATCCAGCCAAACATGCC 59.932 52.381 0.00 0.00 0.00 4.40
4845 8285 0.040058 TCATCCAGCCAAACATGCCT 59.960 50.000 0.00 0.00 0.00 4.75
4846 8286 0.174845 CATCCAGCCAAACATGCCTG 59.825 55.000 0.00 0.00 0.00 4.85
4847 8287 1.610554 ATCCAGCCAAACATGCCTGC 61.611 55.000 0.00 0.00 0.00 4.85
4848 8288 2.263540 CAGCCAAACATGCCTGCC 59.736 61.111 0.00 0.00 0.00 4.85
4849 8289 2.999063 AGCCAAACATGCCTGCCC 60.999 61.111 0.00 0.00 0.00 5.36
4850 8290 3.312718 GCCAAACATGCCTGCCCA 61.313 61.111 0.00 0.00 0.00 5.36
4851 8291 2.658422 CCAAACATGCCTGCCCAC 59.342 61.111 0.00 0.00 0.00 4.61
4852 8292 2.208619 CCAAACATGCCTGCCCACA 61.209 57.895 0.00 0.00 0.00 4.17
4853 8293 1.546589 CCAAACATGCCTGCCCACAT 61.547 55.000 0.00 0.00 0.00 3.21
4854 8294 0.108520 CAAACATGCCTGCCCACATC 60.109 55.000 0.00 0.00 0.00 3.06
4855 8295 0.251922 AAACATGCCTGCCCACATCT 60.252 50.000 0.00 0.00 0.00 2.90
4856 8296 0.625316 AACATGCCTGCCCACATCTA 59.375 50.000 0.00 0.00 0.00 1.98
4857 8297 0.625316 ACATGCCTGCCCACATCTAA 59.375 50.000 0.00 0.00 0.00 2.10
4858 8298 1.315690 CATGCCTGCCCACATCTAAG 58.684 55.000 0.00 0.00 0.00 2.18
4859 8299 0.921896 ATGCCTGCCCACATCTAAGT 59.078 50.000 0.00 0.00 0.00 2.24
4860 8300 1.578897 TGCCTGCCCACATCTAAGTA 58.421 50.000 0.00 0.00 0.00 2.24
4861 8301 1.912731 TGCCTGCCCACATCTAAGTAA 59.087 47.619 0.00 0.00 0.00 2.24
4862 8302 2.092968 TGCCTGCCCACATCTAAGTAAG 60.093 50.000 0.00 0.00 0.00 2.34
4863 8303 2.092914 GCCTGCCCACATCTAAGTAAGT 60.093 50.000 0.00 0.00 0.00 2.24
4864 8304 3.134081 GCCTGCCCACATCTAAGTAAGTA 59.866 47.826 0.00 0.00 0.00 2.24
4865 8305 4.694339 CCTGCCCACATCTAAGTAAGTAC 58.306 47.826 0.00 0.00 0.00 2.73
4866 8306 4.406003 CCTGCCCACATCTAAGTAAGTACT 59.594 45.833 0.00 0.00 38.39 2.73
4867 8307 5.452077 CCTGCCCACATCTAAGTAAGTACTC 60.452 48.000 0.00 0.00 34.99 2.59
4868 8308 4.404715 TGCCCACATCTAAGTAAGTACTCC 59.595 45.833 0.00 0.00 34.99 3.85
4869 8309 4.202233 GCCCACATCTAAGTAAGTACTCCC 60.202 50.000 0.00 0.00 34.99 4.30
4870 8310 5.209659 CCCACATCTAAGTAAGTACTCCCT 58.790 45.833 0.00 0.00 34.99 4.20
4871 8311 5.302313 CCCACATCTAAGTAAGTACTCCCTC 59.698 48.000 0.00 0.00 34.99 4.30
4872 8312 5.302313 CCACATCTAAGTAAGTACTCCCTCC 59.698 48.000 0.00 0.00 34.99 4.30
4873 8313 5.008811 CACATCTAAGTAAGTACTCCCTCCG 59.991 48.000 0.00 0.00 34.99 4.63
4874 8314 4.851639 TCTAAGTAAGTACTCCCTCCGT 57.148 45.455 0.00 0.00 34.99 4.69
4875 8315 4.775236 TCTAAGTAAGTACTCCCTCCGTC 58.225 47.826 0.00 0.00 34.99 4.79
4876 8316 2.433662 AGTAAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
4877 8317 1.020437 GTAAGTACTCCCTCCGTCCG 58.980 60.000 0.00 0.00 0.00 4.79
4878 8318 0.911769 TAAGTACTCCCTCCGTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
4879 8319 0.038744 AAGTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
4880 8320 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
4881 8321 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
4882 8322 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
4904 8344 8.558973 AAAAACTTGTCATCAAAATGGACAAA 57.441 26.923 7.70 0.00 34.98 2.83
4905 8345 8.558973 AAAACTTGTCATCAAAATGGACAAAA 57.441 26.923 7.70 0.00 34.98 2.44
4906 8346 8.558973 AAACTTGTCATCAAAATGGACAAAAA 57.441 26.923 7.70 0.00 34.98 1.94
4907 8347 7.775397 ACTTGTCATCAAAATGGACAAAAAG 57.225 32.000 7.70 0.11 34.98 2.27
4908 8348 6.762661 ACTTGTCATCAAAATGGACAAAAAGG 59.237 34.615 7.70 0.11 34.98 3.11
4909 8349 5.609423 TGTCATCAAAATGGACAAAAAGGG 58.391 37.500 0.00 0.00 33.42 3.95
4910 8350 4.996758 GTCATCAAAATGGACAAAAAGGGG 59.003 41.667 0.00 0.00 33.42 4.79
4911 8351 4.657969 TCATCAAAATGGACAAAAAGGGGT 59.342 37.500 0.00 0.00 33.42 4.95
4912 8352 4.414337 TCAAAATGGACAAAAAGGGGTG 57.586 40.909 0.00 0.00 0.00 4.61
4913 8353 3.777522 TCAAAATGGACAAAAAGGGGTGT 59.222 39.130 0.00 0.00 0.00 4.16
4914 8354 4.962995 TCAAAATGGACAAAAAGGGGTGTA 59.037 37.500 0.00 0.00 0.00 2.90
4915 8355 5.604650 TCAAAATGGACAAAAAGGGGTGTAT 59.395 36.000 0.00 0.00 0.00 2.29
4916 8356 5.738619 AAATGGACAAAAAGGGGTGTATC 57.261 39.130 0.00 0.00 0.00 2.24
4917 8357 4.675063 ATGGACAAAAAGGGGTGTATCT 57.325 40.909 0.00 0.00 0.00 1.98
4918 8358 5.789574 ATGGACAAAAAGGGGTGTATCTA 57.210 39.130 0.00 0.00 0.00 1.98
4919 8359 5.174037 TGGACAAAAAGGGGTGTATCTAG 57.826 43.478 0.00 0.00 0.00 2.43
4920 8360 4.847512 TGGACAAAAAGGGGTGTATCTAGA 59.152 41.667 0.00 0.00 0.00 2.43
4921 8361 5.311121 TGGACAAAAAGGGGTGTATCTAGAA 59.689 40.000 0.00 0.00 0.00 2.10
4922 8362 5.646793 GGACAAAAAGGGGTGTATCTAGAAC 59.353 44.000 0.00 0.00 0.00 3.01
4923 8363 6.449830 ACAAAAAGGGGTGTATCTAGAACT 57.550 37.500 0.00 0.00 0.00 3.01
4924 8364 7.310858 GGACAAAAAGGGGTGTATCTAGAACTA 60.311 40.741 0.00 0.00 0.00 2.24
4925 8365 7.981142 ACAAAAAGGGGTGTATCTAGAACTAA 58.019 34.615 0.00 0.00 0.00 2.24
4926 8366 8.442374 ACAAAAAGGGGTGTATCTAGAACTAAA 58.558 33.333 0.00 0.00 0.00 1.85
4927 8367 9.292195 CAAAAAGGGGTGTATCTAGAACTAAAA 57.708 33.333 0.00 0.00 0.00 1.52
4931 8371 8.849543 AGGGGTGTATCTAGAACTAAAATACA 57.150 34.615 0.00 0.00 32.07 2.29
4932 8372 9.448587 AGGGGTGTATCTAGAACTAAAATACAT 57.551 33.333 0.00 3.35 35.81 2.29
4933 8373 9.708092 GGGGTGTATCTAGAACTAAAATACATC 57.292 37.037 0.00 13.73 35.81 3.06
4947 8387 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.410400 GGTTCGTGAGGCCAGGGG 62.410 72.222 5.01 0.00 0.00 4.79
20 21 4.760047 CGGTTCGTGAGGCCAGGG 62.760 72.222 5.01 0.00 0.00 4.45
21 22 4.760047 CCGGTTCGTGAGGCCAGG 62.760 72.222 5.01 0.00 0.00 4.45
22 23 4.760047 CCCGGTTCGTGAGGCCAG 62.760 72.222 5.01 0.00 0.00 4.85
24 25 4.754667 GTCCCGGTTCGTGAGGCC 62.755 72.222 0.00 0.00 0.00 5.19
25 26 3.934391 CTGTCCCGGTTCGTGAGGC 62.934 68.421 0.00 0.00 0.00 4.70
26 27 1.605058 ATCTGTCCCGGTTCGTGAGG 61.605 60.000 0.00 0.00 0.00 3.86
27 28 0.458543 CATCTGTCCCGGTTCGTGAG 60.459 60.000 0.00 0.00 0.00 3.51
28 29 1.589630 CATCTGTCCCGGTTCGTGA 59.410 57.895 0.00 0.00 0.00 4.35
29 30 1.447838 CCATCTGTCCCGGTTCGTG 60.448 63.158 0.00 0.00 0.00 4.35
30 31 2.978824 CCATCTGTCCCGGTTCGT 59.021 61.111 0.00 0.00 0.00 3.85
31 32 2.511600 GCCATCTGTCCCGGTTCG 60.512 66.667 0.00 0.00 0.00 3.95
32 33 2.124695 GGCCATCTGTCCCGGTTC 60.125 66.667 0.00 0.00 0.00 3.62
33 34 3.728373 GGGCCATCTGTCCCGGTT 61.728 66.667 4.39 0.00 32.00 4.44
36 37 3.492353 ATGGGGCCATCTGTCCCG 61.492 66.667 4.39 0.00 43.55 5.14
37 38 2.196776 CATGGGGCCATCTGTCCC 59.803 66.667 4.39 0.00 41.87 4.46
38 39 2.196776 CCATGGGGCCATCTGTCC 59.803 66.667 4.39 0.00 33.90 4.02
39 40 2.196776 CCCATGGGGCCATCTGTC 59.803 66.667 24.53 0.00 35.35 3.51
49 50 1.149174 CAGAATCGGGACCCATGGG 59.851 63.158 30.23 30.23 42.03 4.00
50 51 1.149174 CCAGAATCGGGACCCATGG 59.851 63.158 12.15 4.14 0.00 3.66
51 52 0.179045 GACCAGAATCGGGACCCATG 60.179 60.000 12.15 0.60 0.00 3.66
52 53 0.326618 AGACCAGAATCGGGACCCAT 60.327 55.000 12.15 0.13 0.00 4.00
53 54 1.080354 AGACCAGAATCGGGACCCA 59.920 57.895 12.15 0.00 0.00 4.51
54 55 0.976073 TCAGACCAGAATCGGGACCC 60.976 60.000 6.40 0.00 0.00 4.46
55 56 0.902531 TTCAGACCAGAATCGGGACC 59.097 55.000 6.40 0.00 0.00 4.46
56 57 1.405661 GGTTCAGACCAGAATCGGGAC 60.406 57.143 6.40 0.00 45.77 4.46
57 58 0.902531 GGTTCAGACCAGAATCGGGA 59.097 55.000 6.40 0.00 45.77 5.14
58 59 0.460284 CGGTTCAGACCAGAATCGGG 60.460 60.000 0.00 0.00 45.68 5.14
59 60 3.050703 CGGTTCAGACCAGAATCGG 57.949 57.895 1.69 0.00 45.68 4.18
61 62 0.902531 TCCCGGTTCAGACCAGAATC 59.097 55.000 0.00 0.00 46.91 2.52
62 63 0.613777 GTCCCGGTTCAGACCAGAAT 59.386 55.000 0.00 0.00 46.91 2.40
63 64 0.471211 AGTCCCGGTTCAGACCAGAA 60.471 55.000 0.00 0.00 46.91 3.02
64 65 0.406750 TAGTCCCGGTTCAGACCAGA 59.593 55.000 0.00 0.00 46.91 3.86
65 66 1.263356 TTAGTCCCGGTTCAGACCAG 58.737 55.000 0.00 0.00 46.91 4.00
66 67 1.553248 CATTAGTCCCGGTTCAGACCA 59.447 52.381 0.00 0.00 46.91 4.02
67 68 1.134491 CCATTAGTCCCGGTTCAGACC 60.134 57.143 0.00 0.00 42.87 3.85
68 69 1.134491 CCCATTAGTCCCGGTTCAGAC 60.134 57.143 0.00 0.00 0.00 3.51
69 70 1.200519 CCCATTAGTCCCGGTTCAGA 58.799 55.000 0.00 0.00 0.00 3.27
70 71 0.463833 GCCCATTAGTCCCGGTTCAG 60.464 60.000 0.00 0.00 0.00 3.02
71 72 1.605453 GCCCATTAGTCCCGGTTCA 59.395 57.895 0.00 0.00 0.00 3.18
72 73 1.153025 GGCCCATTAGTCCCGGTTC 60.153 63.158 0.00 0.00 0.00 3.62
73 74 1.926489 TGGCCCATTAGTCCCGGTT 60.926 57.895 0.00 0.00 0.00 4.44
74 75 2.285818 TGGCCCATTAGTCCCGGT 60.286 61.111 0.00 0.00 0.00 5.28
75 76 1.921869 AAGTGGCCCATTAGTCCCGG 61.922 60.000 0.00 0.00 0.00 5.73
76 77 0.463833 GAAGTGGCCCATTAGTCCCG 60.464 60.000 0.00 0.00 0.00 5.14
77 78 0.463833 CGAAGTGGCCCATTAGTCCC 60.464 60.000 0.00 0.00 0.00 4.46
78 79 0.463833 CCGAAGTGGCCCATTAGTCC 60.464 60.000 0.00 0.00 0.00 3.85
79 80 3.080647 CCGAAGTGGCCCATTAGTC 57.919 57.895 0.00 0.00 0.00 2.59
89 90 2.690653 TTTGGTCCAGGCCGAAGTGG 62.691 60.000 2.23 2.23 42.50 4.00
90 91 1.228124 TTTGGTCCAGGCCGAAGTG 60.228 57.895 0.00 0.00 0.00 3.16
91 92 1.073199 CTTTGGTCCAGGCCGAAGT 59.927 57.895 16.54 0.00 42.42 3.01
92 93 3.987404 CTTTGGTCCAGGCCGAAG 58.013 61.111 12.91 12.91 41.92 3.79
93 94 2.282180 GCTTTGGTCCAGGCCGAA 60.282 61.111 0.00 3.34 0.00 4.30
94 95 4.344865 GGCTTTGGTCCAGGCCGA 62.345 66.667 18.20 0.00 35.08 5.54
97 98 2.677875 CAGGGCTTTGGTCCAGGC 60.678 66.667 9.58 9.58 40.27 4.85
98 99 0.469892 AAACAGGGCTTTGGTCCAGG 60.470 55.000 0.00 0.00 40.27 4.45
99 100 1.341209 GAAAACAGGGCTTTGGTCCAG 59.659 52.381 0.00 0.00 40.27 3.86
100 101 1.063266 AGAAAACAGGGCTTTGGTCCA 60.063 47.619 0.00 0.00 40.27 4.02
101 102 1.704641 AGAAAACAGGGCTTTGGTCC 58.295 50.000 0.00 0.00 37.52 4.46
102 103 5.710567 ACTAATAGAAAACAGGGCTTTGGTC 59.289 40.000 0.00 0.00 0.00 4.02
103 104 5.476945 CACTAATAGAAAACAGGGCTTTGGT 59.523 40.000 0.00 0.00 0.00 3.67
104 105 5.622233 GCACTAATAGAAAACAGGGCTTTGG 60.622 44.000 0.00 0.00 34.53 3.28
105 106 5.183904 AGCACTAATAGAAAACAGGGCTTTG 59.816 40.000 0.00 0.00 45.32 2.77
106 107 5.325239 AGCACTAATAGAAAACAGGGCTTT 58.675 37.500 0.00 0.00 45.32 3.51
107 108 4.923415 AGCACTAATAGAAAACAGGGCTT 58.077 39.130 0.00 0.00 45.32 4.35
108 109 4.576330 AGCACTAATAGAAAACAGGGCT 57.424 40.909 0.00 0.00 42.86 5.19
109 110 5.429130 ACTAGCACTAATAGAAAACAGGGC 58.571 41.667 0.00 0.00 37.71 5.19
110 111 6.640518 TGACTAGCACTAATAGAAAACAGGG 58.359 40.000 0.00 0.00 0.00 4.45
111 112 7.819900 ACTTGACTAGCACTAATAGAAAACAGG 59.180 37.037 0.00 0.00 0.00 4.00
112 113 8.651588 CACTTGACTAGCACTAATAGAAAACAG 58.348 37.037 0.00 0.00 0.00 3.16
113 114 7.117812 GCACTTGACTAGCACTAATAGAAAACA 59.882 37.037 0.00 0.00 0.00 2.83
114 115 7.413109 GGCACTTGACTAGCACTAATAGAAAAC 60.413 40.741 0.00 0.00 0.00 2.43
115 116 6.594159 GGCACTTGACTAGCACTAATAGAAAA 59.406 38.462 0.00 0.00 0.00 2.29
116 117 6.106673 GGCACTTGACTAGCACTAATAGAAA 58.893 40.000 0.00 0.00 0.00 2.52
117 118 5.395324 GGGCACTTGACTAGCACTAATAGAA 60.395 44.000 0.00 0.00 0.00 2.10
118 119 4.099573 GGGCACTTGACTAGCACTAATAGA 59.900 45.833 0.00 0.00 0.00 1.98
119 120 4.141937 TGGGCACTTGACTAGCACTAATAG 60.142 45.833 0.00 0.00 31.64 1.73
120 121 3.772572 TGGGCACTTGACTAGCACTAATA 59.227 43.478 0.00 0.00 31.64 0.98
121 122 2.571653 TGGGCACTTGACTAGCACTAAT 59.428 45.455 0.00 0.00 31.64 1.73
122 123 1.974957 TGGGCACTTGACTAGCACTAA 59.025 47.619 0.00 0.00 31.64 2.24
123 124 1.275291 GTGGGCACTTGACTAGCACTA 59.725 52.381 0.00 0.00 31.64 2.74
124 125 0.035458 GTGGGCACTTGACTAGCACT 59.965 55.000 0.00 0.00 31.64 4.40
125 126 0.250295 TGTGGGCACTTGACTAGCAC 60.250 55.000 0.00 0.00 0.00 4.40
126 127 0.250295 GTGTGGGCACTTGACTAGCA 60.250 55.000 0.00 0.00 42.13 3.49
127 128 2.544726 GTGTGGGCACTTGACTAGC 58.455 57.895 0.00 0.00 42.13 3.42
177 178 2.555199 GGGTGCAGCTATCAGTAGTTG 58.445 52.381 16.65 0.00 40.80 3.16
199 200 1.815003 GGGTGAAGGTGCATGAGAAAG 59.185 52.381 0.00 0.00 0.00 2.62
242 243 5.636123 TGACCTTTTAGCAAACTATTGGGA 58.364 37.500 0.00 0.00 37.02 4.37
278 279 6.801539 TTTCGAACTATGAATGAAGTGCTT 57.198 33.333 0.00 0.00 0.00 3.91
436 438 6.631971 TGATTTGAAAATGTGACTGCACTA 57.368 33.333 0.00 0.00 45.36 2.74
471 475 6.879962 TGTTAACACATGAGCTACGTAAAAC 58.120 36.000 3.59 0.00 0.00 2.43
543 548 9.705290 AAAATGGTTAAACAATTCCTACATGAC 57.295 29.630 0.00 0.00 0.00 3.06
689 697 0.175531 TGATTCGATTCTCGGCAGCA 59.824 50.000 8.63 0.00 40.88 4.41
786 797 9.931210 AGAAAAGTATTGTTTTTACTCAACTCG 57.069 29.630 0.00 0.00 29.58 4.18
860 871 4.987912 CAGTGAGGACAAGTTCTTCTTCTC 59.012 45.833 0.00 0.00 33.63 2.87
861 872 4.742138 GCAGTGAGGACAAGTTCTTCTTCT 60.742 45.833 0.00 0.00 33.63 2.85
862 873 3.496507 GCAGTGAGGACAAGTTCTTCTTC 59.503 47.826 0.00 0.00 33.63 2.87
863 874 3.135530 AGCAGTGAGGACAAGTTCTTCTT 59.864 43.478 0.00 0.00 36.75 2.52
939 950 1.711060 GAGTGGACCGAGAGAGAGCG 61.711 65.000 0.00 0.00 0.00 5.03
940 951 1.381165 GGAGTGGACCGAGAGAGAGC 61.381 65.000 0.00 0.00 0.00 4.09
1262 1656 2.240279 CTAATCGAAGACGGGGAGGAT 58.760 52.381 0.00 0.00 42.51 3.24
1433 1828 8.673626 TTTCAAAAGATCGAGATGTAAATTGC 57.326 30.769 0.00 0.00 0.00 3.56
1547 1945 0.676466 TATGGCTTTCGTGCTGGGTG 60.676 55.000 0.00 0.00 0.00 4.61
1588 1986 4.737855 GAGGTTCACAGCTCCTATTACA 57.262 45.455 0.00 0.00 41.09 2.41
1640 2060 8.755977 CCTACTGGACTAACCTTCTATTTACAA 58.244 37.037 0.00 0.00 39.86 2.41
1641 2061 8.117956 TCCTACTGGACTAACCTTCTATTTACA 58.882 37.037 0.00 0.00 37.46 2.41
1642 2062 8.530804 TCCTACTGGACTAACCTTCTATTTAC 57.469 38.462 0.00 0.00 37.46 2.01
1643 2063 9.198475 CTTCCTACTGGACTAACCTTCTATTTA 57.802 37.037 0.00 0.00 43.06 1.40
1644 2064 7.125963 CCTTCCTACTGGACTAACCTTCTATTT 59.874 40.741 0.00 0.00 43.06 1.40
1645 2065 6.612049 CCTTCCTACTGGACTAACCTTCTATT 59.388 42.308 0.00 0.00 43.06 1.73
1646 2066 6.068379 TCCTTCCTACTGGACTAACCTTCTAT 60.068 42.308 0.00 0.00 43.06 1.98
1647 2067 5.254737 TCCTTCCTACTGGACTAACCTTCTA 59.745 44.000 0.00 0.00 43.06 2.10
1648 2068 4.045590 TCCTTCCTACTGGACTAACCTTCT 59.954 45.833 0.00 0.00 43.06 2.85
1649 2069 4.351127 TCCTTCCTACTGGACTAACCTTC 58.649 47.826 0.00 0.00 43.06 3.46
1650 2070 4.415224 TCCTTCCTACTGGACTAACCTT 57.585 45.455 0.00 0.00 43.06 3.50
1651 2071 4.415224 TTCCTTCCTACTGGACTAACCT 57.585 45.455 0.00 0.00 43.06 3.50
1652 2072 4.285260 TGTTTCCTTCCTACTGGACTAACC 59.715 45.833 0.00 0.00 43.06 2.85
1653 2073 5.236282 GTGTTTCCTTCCTACTGGACTAAC 58.764 45.833 0.00 0.00 43.06 2.34
1654 2074 4.285260 GGTGTTTCCTTCCTACTGGACTAA 59.715 45.833 0.00 0.00 43.06 2.24
1655 2075 3.836562 GGTGTTTCCTTCCTACTGGACTA 59.163 47.826 0.00 0.00 43.06 2.59
1656 2076 2.638363 GGTGTTTCCTTCCTACTGGACT 59.362 50.000 0.00 0.00 43.06 3.85
1657 2077 2.370849 TGGTGTTTCCTTCCTACTGGAC 59.629 50.000 0.00 0.00 43.06 4.02
1658 2078 2.370849 GTGGTGTTTCCTTCCTACTGGA 59.629 50.000 0.00 0.00 41.36 3.86
1659 2079 2.552373 GGTGGTGTTTCCTTCCTACTGG 60.552 54.545 0.00 0.00 37.07 4.00
1660 2080 2.552373 GGGTGGTGTTTCCTTCCTACTG 60.552 54.545 0.00 0.00 37.07 2.74
1661 2081 1.703513 GGGTGGTGTTTCCTTCCTACT 59.296 52.381 0.00 0.00 37.07 2.57
1865 2316 1.964223 GATCGGAGGGAGTAGCATTCA 59.036 52.381 0.00 0.00 0.00 2.57
1908 2359 3.235200 CTCCCTCCGATCCAAGATAAGT 58.765 50.000 0.00 0.00 0.00 2.24
1914 2365 1.776662 TGTACTCCCTCCGATCCAAG 58.223 55.000 0.00 0.00 0.00 3.61
1921 2372 5.946972 AGACTATAATCATGTACTCCCTCCG 59.053 44.000 0.00 0.00 0.00 4.63
2030 2481 0.606401 CCCAGTTTCAGTGGCGTGAT 60.606 55.000 0.00 0.00 37.37 3.06
2075 2526 4.636206 GCAATACCAAAGTAGAGAACAGGG 59.364 45.833 0.00 0.00 0.00 4.45
2265 2716 4.852134 TGATTAGCAGCAGCAAGAAAAA 57.148 36.364 3.17 0.00 45.49 1.94
2291 2742 4.949856 TGGCTTGAGTTTTCTCTTTTCTGT 59.050 37.500 0.00 0.00 46.30 3.41
2690 5927 7.470147 CGGGAGAATAGAAGCTACATCAGTTTA 60.470 40.741 0.00 0.00 0.00 2.01
2738 5977 4.217550 GGCAAAATGGTTAGTCTGTAAGCA 59.782 41.667 0.00 0.00 38.94 3.91
2739 5978 4.380550 GGGCAAAATGGTTAGTCTGTAAGC 60.381 45.833 0.00 0.00 0.00 3.09
2978 6222 5.005094 GGGTACTGACTATAGACTAGCCTG 58.995 50.000 6.78 0.00 0.00 4.85
2981 6225 7.230913 TCAATTGGGTACTGACTATAGACTAGC 59.769 40.741 6.78 0.00 0.00 3.42
2983 6227 8.280084 AGTCAATTGGGTACTGACTATAGACTA 58.720 37.037 11.78 0.00 46.11 2.59
3112 6356 4.156556 TCAAATATTCTGACAAGCAGGTGC 59.843 41.667 0.00 0.00 44.98 5.01
3229 6478 4.966274 TACCCCCAGCACCCACGT 62.966 66.667 0.00 0.00 0.00 4.49
3439 6695 1.073125 TGTGTATGTGGTTGGACCCTG 59.927 52.381 0.00 0.00 37.50 4.45
3440 6696 1.073284 GTGTGTATGTGGTTGGACCCT 59.927 52.381 0.00 0.00 37.50 4.34
3466 6725 5.013547 CCATGGTAGTGGTGATTTTGGTTA 58.986 41.667 2.57 0.00 34.46 2.85
3768 7197 6.877611 ACAACTTGGTTTATTAGAGGTGTG 57.122 37.500 0.00 0.00 36.94 3.82
3801 7230 2.494870 AGCATTGCCTCTTGGATTCAAC 59.505 45.455 4.70 0.00 34.57 3.18
3808 7237 0.744874 CCATGAGCATTGCCTCTTGG 59.255 55.000 19.04 19.04 45.14 3.61
3817 7246 6.379133 ACTGAACATGATTTACCATGAGCATT 59.621 34.615 10.42 1.11 44.98 3.56
3856 7285 0.825010 AAGGCAGTGAAGCTGGGTTG 60.825 55.000 0.00 0.00 45.14 3.77
3940 7369 2.892852 CACCACCAACCATTTGTCTGAT 59.107 45.455 0.00 0.00 0.00 2.90
3944 7373 3.118956 TGAAACACCACCAACCATTTGTC 60.119 43.478 0.00 0.00 0.00 3.18
3978 7407 4.399219 TCAAACAACCAACCGGAATATGA 58.601 39.130 9.46 0.00 35.59 2.15
3995 7424 3.685058 GACTTAGAATGGCGCATCAAAC 58.315 45.455 10.83 0.00 0.00 2.93
4001 7430 0.530744 ACTCGACTTAGAATGGCGCA 59.469 50.000 10.83 0.00 0.00 6.09
4003 7432 7.639162 AAATATTACTCGACTTAGAATGGCG 57.361 36.000 0.00 0.00 0.00 5.69
4016 7445 5.117287 GCTTGCTCTCGGTAAATATTACTCG 59.883 44.000 0.00 3.45 0.00 4.18
4018 7447 5.986135 CAGCTTGCTCTCGGTAAATATTACT 59.014 40.000 0.00 0.00 0.00 2.24
4074 7503 5.703592 ACGCCAGTCACAAATGAAATAACTA 59.296 36.000 0.00 0.00 36.31 2.24
4109 7538 2.042831 CCCTTCCGCTGAAAGGCTG 61.043 63.158 0.00 0.00 0.00 4.85
4113 7542 1.604604 TTTCACCCTTCCGCTGAAAG 58.395 50.000 0.00 0.00 31.72 2.62
4121 7550 7.013942 ACAGTAGTAAACAATTTTCACCCTTCC 59.986 37.037 0.00 0.00 0.00 3.46
4162 7593 7.765360 TGTGCAATCTTTGAAGACATTTTCTTT 59.235 29.630 0.00 0.00 45.24 2.52
4183 7614 2.385013 ATCGTAGCATGAAGTGTGCA 57.615 45.000 0.00 0.00 44.87 4.57
4188 7619 6.761242 TGTGCTTAATAATCGTAGCATGAAGT 59.239 34.615 0.00 0.00 44.52 3.01
4276 7710 1.926510 GCTGTTTTTGGCTTGTCACAC 59.073 47.619 0.00 0.00 0.00 3.82
4300 7734 1.070821 CACGAGCGATTCTGCAGAAA 58.929 50.000 31.55 16.04 37.61 2.52
4302 7736 1.807165 GCACGAGCGATTCTGCAGA 60.807 57.895 13.74 13.74 37.31 4.26
4303 7737 2.699809 GCACGAGCGATTCTGCAG 59.300 61.111 7.63 7.63 37.31 4.41
4319 7753 3.584406 ACCATAGATCAGATGTAGCGC 57.416 47.619 0.00 0.00 0.00 5.92
4338 7772 3.598299 TGCACCGTGTTATTAGGGTAAC 58.402 45.455 0.00 0.00 36.74 2.50
4339 7773 3.977134 TGCACCGTGTTATTAGGGTAA 57.023 42.857 0.00 0.00 36.74 2.85
4344 7778 2.032054 CCAGCATGCACCGTGTTATTAG 59.968 50.000 21.98 0.00 31.97 1.73
4349 7783 2.203337 ACCAGCATGCACCGTGTT 60.203 55.556 21.98 0.00 31.97 3.32
4355 7789 3.244976 GTTAAATCACACCAGCATGCAC 58.755 45.455 21.98 0.00 31.97 4.57
4383 7817 4.903054 TCTTGCATCAATCAGAGTTGAGT 58.097 39.130 0.00 0.00 41.05 3.41
4400 7834 3.382546 ACATGGTATTGGATTGCTCTTGC 59.617 43.478 0.00 0.00 40.20 4.01
4401 7835 5.824624 AGTACATGGTATTGGATTGCTCTTG 59.175 40.000 0.00 0.00 0.00 3.02
4402 7836 6.006275 AGTACATGGTATTGGATTGCTCTT 57.994 37.500 0.00 0.00 0.00 2.85
4403 7837 5.615289 GAGTACATGGTATTGGATTGCTCT 58.385 41.667 0.00 0.00 0.00 4.09
4404 7838 4.449068 CGAGTACATGGTATTGGATTGCTC 59.551 45.833 0.00 0.00 0.00 4.26
4423 7857 1.380650 GGAGGGAGGAAGAGCGAGT 60.381 63.158 0.00 0.00 0.00 4.18
4438 7872 4.319177 GTTTAATCGGAGATGGATGGGAG 58.681 47.826 0.00 0.00 45.12 4.30
4468 7902 8.196378 AGATGGTTTAGTCTTGAGTAAGTTCT 57.804 34.615 0.00 0.00 35.38 3.01
4469 7903 9.356433 GTAGATGGTTTAGTCTTGAGTAAGTTC 57.644 37.037 0.00 0.00 35.38 3.01
4471 7905 8.653036 AGTAGATGGTTTAGTCTTGAGTAAGT 57.347 34.615 0.00 0.00 35.38 2.24
4476 7916 9.398538 AGTACTAGTAGATGGTTTAGTCTTGAG 57.601 37.037 1.87 0.00 0.00 3.02
4479 7919 7.779326 GGGAGTACTAGTAGATGGTTTAGTCTT 59.221 40.741 1.87 0.00 0.00 3.01
4493 7933 2.846206 TGGAACGGAGGGAGTACTAGTA 59.154 50.000 0.00 0.00 0.00 1.82
4494 7934 1.637553 TGGAACGGAGGGAGTACTAGT 59.362 52.381 0.00 0.00 0.00 2.57
4495 7935 2.431954 TGGAACGGAGGGAGTACTAG 57.568 55.000 0.00 0.00 0.00 2.57
4496 7936 2.905415 TTGGAACGGAGGGAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
4497 7937 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
4498 7938 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
4513 7953 6.189677 TCCATTTCTACGGCAAGTAATTTG 57.810 37.500 0.00 0.00 39.88 2.32
4514 7954 6.377146 ACATCCATTTCTACGGCAAGTAATTT 59.623 34.615 0.00 0.00 34.45 1.82
4524 7964 7.887381 AGTTCTAGATACATCCATTTCTACGG 58.113 38.462 0.00 0.00 0.00 4.02
4582 8022 1.753073 TCCCTCCGTTCCGAATTACTC 59.247 52.381 0.00 0.00 0.00 2.59
4591 8031 4.750021 ATTTTAGTACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
4609 8049 9.227777 ACTTAGCTCAGTAAAACCGATAAATTT 57.772 29.630 0.00 0.00 0.00 1.82
4610 8050 8.788325 ACTTAGCTCAGTAAAACCGATAAATT 57.212 30.769 0.00 0.00 0.00 1.82
4611 8051 8.788325 AACTTAGCTCAGTAAAACCGATAAAT 57.212 30.769 0.00 0.00 0.00 1.40
4612 8052 8.611654 AAACTTAGCTCAGTAAAACCGATAAA 57.388 30.769 0.00 0.00 0.00 1.40
4613 8053 8.611654 AAAACTTAGCTCAGTAAAACCGATAA 57.388 30.769 0.00 0.00 0.00 1.75
4614 8054 9.709495 TTAAAACTTAGCTCAGTAAAACCGATA 57.291 29.630 0.00 0.00 0.00 2.92
4615 8055 8.611654 TTAAAACTTAGCTCAGTAAAACCGAT 57.388 30.769 0.00 0.00 0.00 4.18
4616 8056 8.436046 TTTAAAACTTAGCTCAGTAAAACCGA 57.564 30.769 0.00 0.00 0.00 4.69
4624 8064 7.760340 CGAGACCTATTTAAAACTTAGCTCAGT 59.240 37.037 0.00 0.00 0.00 3.41
4625 8065 7.760340 ACGAGACCTATTTAAAACTTAGCTCAG 59.240 37.037 0.00 0.00 0.00 3.35
4626 8066 7.609056 ACGAGACCTATTTAAAACTTAGCTCA 58.391 34.615 0.00 0.00 0.00 4.26
4627 8067 8.476657 AACGAGACCTATTTAAAACTTAGCTC 57.523 34.615 0.00 0.00 0.00 4.09
4628 8068 8.092687 TGAACGAGACCTATTTAAAACTTAGCT 58.907 33.333 0.00 0.00 0.00 3.32
4629 8069 8.167345 GTGAACGAGACCTATTTAAAACTTAGC 58.833 37.037 0.00 0.00 0.00 3.09
4630 8070 8.654215 GGTGAACGAGACCTATTTAAAACTTAG 58.346 37.037 0.00 0.00 0.00 2.18
4631 8071 8.370182 AGGTGAACGAGACCTATTTAAAACTTA 58.630 33.333 3.42 0.00 42.35 2.24
4632 8072 7.222161 AGGTGAACGAGACCTATTTAAAACTT 58.778 34.615 3.42 0.00 42.35 2.66
4633 8073 6.766429 AGGTGAACGAGACCTATTTAAAACT 58.234 36.000 3.42 0.00 42.35 2.66
4634 8074 7.430992 AAGGTGAACGAGACCTATTTAAAAC 57.569 36.000 5.42 0.00 43.42 2.43
4635 8075 8.454570 AAAAGGTGAACGAGACCTATTTAAAA 57.545 30.769 5.42 0.00 43.42 1.52
4636 8076 8.454570 AAAAAGGTGAACGAGACCTATTTAAA 57.545 30.769 5.42 0.00 43.42 1.52
4637 8077 9.211485 CTAAAAAGGTGAACGAGACCTATTTAA 57.789 33.333 5.42 0.00 43.42 1.52
4638 8078 7.332678 GCTAAAAAGGTGAACGAGACCTATTTA 59.667 37.037 5.42 0.00 43.42 1.40
4639 8079 6.148976 GCTAAAAAGGTGAACGAGACCTATTT 59.851 38.462 5.42 6.14 43.42 1.40
4640 8080 5.642491 GCTAAAAAGGTGAACGAGACCTATT 59.358 40.000 5.42 6.76 43.42 1.73
4641 8081 5.176592 GCTAAAAAGGTGAACGAGACCTAT 58.823 41.667 5.42 0.00 43.42 2.57
4642 8082 4.562143 GGCTAAAAAGGTGAACGAGACCTA 60.562 45.833 5.42 0.00 43.42 3.08
4643 8083 3.400255 GCTAAAAAGGTGAACGAGACCT 58.600 45.455 0.00 0.00 46.36 3.85
4644 8084 2.483106 GGCTAAAAAGGTGAACGAGACC 59.517 50.000 0.00 0.00 0.00 3.85
4645 8085 3.135994 TGGCTAAAAAGGTGAACGAGAC 58.864 45.455 0.00 0.00 0.00 3.36
4646 8086 3.478857 TGGCTAAAAAGGTGAACGAGA 57.521 42.857 0.00 0.00 0.00 4.04
4647 8087 3.127030 GGATGGCTAAAAAGGTGAACGAG 59.873 47.826 0.00 0.00 0.00 4.18
4648 8088 3.078837 GGATGGCTAAAAAGGTGAACGA 58.921 45.455 0.00 0.00 0.00 3.85
4649 8089 2.159572 CGGATGGCTAAAAAGGTGAACG 60.160 50.000 0.00 0.00 0.00 3.95
4650 8090 3.078837 TCGGATGGCTAAAAAGGTGAAC 58.921 45.455 0.00 0.00 0.00 3.18
4651 8091 3.426787 TCGGATGGCTAAAAAGGTGAA 57.573 42.857 0.00 0.00 0.00 3.18
4652 8092 3.054728 TGATCGGATGGCTAAAAAGGTGA 60.055 43.478 0.00 0.00 0.00 4.02
4653 8093 3.278574 TGATCGGATGGCTAAAAAGGTG 58.721 45.455 0.00 0.00 0.00 4.00
4654 8094 3.644966 TGATCGGATGGCTAAAAAGGT 57.355 42.857 0.00 0.00 0.00 3.50
4655 8095 4.023707 GTGATGATCGGATGGCTAAAAAGG 60.024 45.833 0.00 0.00 0.00 3.11
4656 8096 4.576053 TGTGATGATCGGATGGCTAAAAAG 59.424 41.667 0.00 0.00 0.00 2.27
4657 8097 4.335315 GTGTGATGATCGGATGGCTAAAAA 59.665 41.667 0.00 0.00 0.00 1.94
4658 8098 3.876914 GTGTGATGATCGGATGGCTAAAA 59.123 43.478 0.00 0.00 0.00 1.52
4659 8099 3.466836 GTGTGATGATCGGATGGCTAAA 58.533 45.455 0.00 0.00 0.00 1.85
4660 8100 2.545742 CGTGTGATGATCGGATGGCTAA 60.546 50.000 0.00 0.00 0.00 3.09
4661 8101 1.000274 CGTGTGATGATCGGATGGCTA 60.000 52.381 0.00 0.00 0.00 3.93
4662 8102 0.249615 CGTGTGATGATCGGATGGCT 60.250 55.000 0.00 0.00 0.00 4.75
4663 8103 1.835483 GCGTGTGATGATCGGATGGC 61.835 60.000 0.00 0.00 0.00 4.40
4664 8104 1.224069 GGCGTGTGATGATCGGATGG 61.224 60.000 0.00 0.00 0.00 3.51
4665 8105 0.530431 TGGCGTGTGATGATCGGATG 60.530 55.000 0.00 0.00 0.00 3.51
4666 8106 0.177836 TTGGCGTGTGATGATCGGAT 59.822 50.000 0.00 0.00 0.00 4.18
4667 8107 0.460109 CTTGGCGTGTGATGATCGGA 60.460 55.000 0.00 0.00 0.00 4.55
4668 8108 0.460109 TCTTGGCGTGTGATGATCGG 60.460 55.000 0.00 0.00 0.00 4.18
4669 8109 1.575244 ATCTTGGCGTGTGATGATCG 58.425 50.000 0.00 0.00 0.00 3.69
4670 8110 4.122776 ACTAATCTTGGCGTGTGATGATC 58.877 43.478 0.00 0.00 0.00 2.92
4671 8111 4.142609 ACTAATCTTGGCGTGTGATGAT 57.857 40.909 0.00 0.00 0.00 2.45
4672 8112 3.610040 ACTAATCTTGGCGTGTGATGA 57.390 42.857 0.00 0.00 0.00 2.92
4673 8113 4.433615 AGTACTAATCTTGGCGTGTGATG 58.566 43.478 0.00 0.00 0.00 3.07
4674 8114 4.737855 AGTACTAATCTTGGCGTGTGAT 57.262 40.909 0.00 0.00 0.00 3.06
4675 8115 4.439700 GCTAGTACTAATCTTGGCGTGTGA 60.440 45.833 3.76 0.00 0.00 3.58
4676 8116 3.797256 GCTAGTACTAATCTTGGCGTGTG 59.203 47.826 3.76 0.00 0.00 3.82
4677 8117 3.488721 CGCTAGTACTAATCTTGGCGTGT 60.489 47.826 18.56 0.00 37.21 4.49
4678 8118 3.043586 CGCTAGTACTAATCTTGGCGTG 58.956 50.000 18.56 3.16 37.21 5.34
4679 8119 3.351020 CGCTAGTACTAATCTTGGCGT 57.649 47.619 18.56 0.00 37.21 5.68
4680 8120 3.351020 ACGCTAGTACTAATCTTGGCG 57.649 47.619 22.78 22.78 45.49 5.69
4681 8121 6.418585 AAAAACGCTAGTACTAATCTTGGC 57.581 37.500 3.76 1.98 0.00 4.52
4728 8168 9.801873 CTAATCTTCACCACTCAAAAAGAAAAA 57.198 29.630 0.00 0.00 30.43 1.94
4729 8169 8.966868 ACTAATCTTCACCACTCAAAAAGAAAA 58.033 29.630 0.00 0.00 30.43 2.29
4730 8170 8.519799 ACTAATCTTCACCACTCAAAAAGAAA 57.480 30.769 0.00 0.00 30.43 2.52
4731 8171 8.519799 AACTAATCTTCACCACTCAAAAAGAA 57.480 30.769 0.00 0.00 30.43 2.52
4732 8172 8.519799 AAACTAATCTTCACCACTCAAAAAGA 57.480 30.769 0.00 0.00 0.00 2.52
4733 8173 9.586435 AAAAACTAATCTTCACCACTCAAAAAG 57.414 29.630 0.00 0.00 0.00 2.27
4759 8199 8.076781 TGAATAAACGCATGCTGTTACTAAAAA 58.923 29.630 22.06 7.98 0.00 1.94
4760 8200 7.585867 TGAATAAACGCATGCTGTTACTAAAA 58.414 30.769 22.06 9.14 0.00 1.52
4761 8201 7.135089 TGAATAAACGCATGCTGTTACTAAA 57.865 32.000 22.06 10.29 0.00 1.85
4762 8202 6.729391 TGAATAAACGCATGCTGTTACTAA 57.271 33.333 22.06 12.23 0.00 2.24
4763 8203 6.729391 TTGAATAAACGCATGCTGTTACTA 57.271 33.333 22.06 14.80 0.00 1.82
4764 8204 5.621197 TTGAATAAACGCATGCTGTTACT 57.379 34.783 22.06 13.50 0.00 2.24
4765 8205 5.856455 ACTTTGAATAAACGCATGCTGTTAC 59.144 36.000 22.06 15.65 0.00 2.50
4766 8206 6.007936 ACTTTGAATAAACGCATGCTGTTA 57.992 33.333 22.06 16.80 0.00 2.41
4767 8207 4.870363 ACTTTGAATAAACGCATGCTGTT 58.130 34.783 17.13 17.68 0.00 3.16
4768 8208 4.503741 ACTTTGAATAAACGCATGCTGT 57.496 36.364 17.13 12.55 0.00 4.40
4769 8209 4.916831 TGAACTTTGAATAAACGCATGCTG 59.083 37.500 17.13 11.87 0.00 4.41
4770 8210 5.119931 TGAACTTTGAATAAACGCATGCT 57.880 34.783 17.13 0.00 0.00 3.79
4771 8211 7.504922 TTATGAACTTTGAATAAACGCATGC 57.495 32.000 7.91 7.91 0.00 4.06
4774 8214 8.473016 CGTTTTTATGAACTTTGAATAAACGCA 58.527 29.630 0.00 0.00 38.86 5.24
4775 8215 8.683774 TCGTTTTTATGAACTTTGAATAAACGC 58.316 29.630 0.00 0.00 42.68 4.84
4778 8218 9.685828 CCCTCGTTTTTATGAACTTTGAATAAA 57.314 29.630 0.00 0.00 0.00 1.40
4779 8219 9.069082 TCCCTCGTTTTTATGAACTTTGAATAA 57.931 29.630 0.00 0.00 0.00 1.40
4780 8220 8.624367 TCCCTCGTTTTTATGAACTTTGAATA 57.376 30.769 0.00 0.00 0.00 1.75
4781 8221 7.519032 TCCCTCGTTTTTATGAACTTTGAAT 57.481 32.000 0.00 0.00 0.00 2.57
4782 8222 6.945938 TCCCTCGTTTTTATGAACTTTGAA 57.054 33.333 0.00 0.00 0.00 2.69
4783 8223 7.662258 TGTATCCCTCGTTTTTATGAACTTTGA 59.338 33.333 0.00 0.00 0.00 2.69
4784 8224 7.812648 TGTATCCCTCGTTTTTATGAACTTTG 58.187 34.615 0.00 0.00 0.00 2.77
4785 8225 7.989416 TGTATCCCTCGTTTTTATGAACTTT 57.011 32.000 0.00 0.00 0.00 2.66
4786 8226 7.989416 TTGTATCCCTCGTTTTTATGAACTT 57.011 32.000 0.00 0.00 0.00 2.66
4787 8227 7.120726 CCTTTGTATCCCTCGTTTTTATGAACT 59.879 37.037 0.00 0.00 0.00 3.01
4788 8228 7.094506 ACCTTTGTATCCCTCGTTTTTATGAAC 60.095 37.037 0.00 0.00 0.00 3.18
4789 8229 6.943718 ACCTTTGTATCCCTCGTTTTTATGAA 59.056 34.615 0.00 0.00 0.00 2.57
4790 8230 6.373216 CACCTTTGTATCCCTCGTTTTTATGA 59.627 38.462 0.00 0.00 0.00 2.15
4791 8231 6.373216 TCACCTTTGTATCCCTCGTTTTTATG 59.627 38.462 0.00 0.00 0.00 1.90
4792 8232 6.478129 TCACCTTTGTATCCCTCGTTTTTAT 58.522 36.000 0.00 0.00 0.00 1.40
4793 8233 5.867330 TCACCTTTGTATCCCTCGTTTTTA 58.133 37.500 0.00 0.00 0.00 1.52
4794 8234 4.721132 TCACCTTTGTATCCCTCGTTTTT 58.279 39.130 0.00 0.00 0.00 1.94
4795 8235 4.324267 CTCACCTTTGTATCCCTCGTTTT 58.676 43.478 0.00 0.00 0.00 2.43
4796 8236 3.868754 GCTCACCTTTGTATCCCTCGTTT 60.869 47.826 0.00 0.00 0.00 3.60
4797 8237 2.354805 GCTCACCTTTGTATCCCTCGTT 60.355 50.000 0.00 0.00 0.00 3.85
4798 8238 1.207329 GCTCACCTTTGTATCCCTCGT 59.793 52.381 0.00 0.00 0.00 4.18
4799 8239 1.482593 AGCTCACCTTTGTATCCCTCG 59.517 52.381 0.00 0.00 0.00 4.63
4800 8240 2.420687 CCAGCTCACCTTTGTATCCCTC 60.421 54.545 0.00 0.00 0.00 4.30
4801 8241 1.561542 CCAGCTCACCTTTGTATCCCT 59.438 52.381 0.00 0.00 0.00 4.20
4802 8242 1.282157 ACCAGCTCACCTTTGTATCCC 59.718 52.381 0.00 0.00 0.00 3.85
4803 8243 2.359900 CACCAGCTCACCTTTGTATCC 58.640 52.381 0.00 0.00 0.00 2.59
4804 8244 2.027192 TCCACCAGCTCACCTTTGTATC 60.027 50.000 0.00 0.00 0.00 2.24
4805 8245 1.985159 TCCACCAGCTCACCTTTGTAT 59.015 47.619 0.00 0.00 0.00 2.29
4806 8246 1.429930 TCCACCAGCTCACCTTTGTA 58.570 50.000 0.00 0.00 0.00 2.41
4807 8247 0.773644 ATCCACCAGCTCACCTTTGT 59.226 50.000 0.00 0.00 0.00 2.83
4808 8248 1.271543 TGATCCACCAGCTCACCTTTG 60.272 52.381 0.00 0.00 0.00 2.77
4809 8249 1.067295 TGATCCACCAGCTCACCTTT 58.933 50.000 0.00 0.00 0.00 3.11
4810 8250 1.211457 GATGATCCACCAGCTCACCTT 59.789 52.381 0.00 0.00 0.00 3.50
4811 8251 0.835941 GATGATCCACCAGCTCACCT 59.164 55.000 0.00 0.00 0.00 4.00
4812 8252 0.179034 GGATGATCCACCAGCTCACC 60.179 60.000 6.60 0.00 36.28 4.02
4813 8253 0.543277 TGGATGATCCACCAGCTCAC 59.457 55.000 10.75 0.00 42.67 3.51
4814 8254 0.835276 CTGGATGATCCACCAGCTCA 59.165 55.000 10.75 0.00 42.67 4.26
4815 8255 3.702147 CTGGATGATCCACCAGCTC 57.298 57.895 10.75 0.00 42.67 4.09
4819 8259 0.703488 TTTGGCTGGATGATCCACCA 59.297 50.000 23.19 23.19 42.67 4.17
4820 8260 1.106285 GTTTGGCTGGATGATCCACC 58.894 55.000 10.75 16.49 42.67 4.61
4821 8261 1.838112 TGTTTGGCTGGATGATCCAC 58.162 50.000 10.75 7.72 42.67 4.02
4822 8262 2.380941 CATGTTTGGCTGGATGATCCA 58.619 47.619 14.42 14.42 45.98 3.41
4823 8263 1.068127 GCATGTTTGGCTGGATGATCC 59.932 52.381 4.05 4.05 36.96 3.36
4824 8264 1.068127 GGCATGTTTGGCTGGATGATC 59.932 52.381 0.00 0.00 44.68 2.92
4825 8265 1.117150 GGCATGTTTGGCTGGATGAT 58.883 50.000 0.00 0.00 44.68 2.45
4826 8266 2.582272 GGCATGTTTGGCTGGATGA 58.418 52.632 0.00 0.00 44.68 2.92
4834 8274 1.546589 ATGTGGGCAGGCATGTTTGG 61.547 55.000 0.00 0.00 0.00 3.28
4835 8275 0.108520 GATGTGGGCAGGCATGTTTG 60.109 55.000 0.00 0.00 0.00 2.93
4836 8276 0.251922 AGATGTGGGCAGGCATGTTT 60.252 50.000 0.00 0.00 0.00 2.83
4837 8277 0.625316 TAGATGTGGGCAGGCATGTT 59.375 50.000 0.00 0.00 0.00 2.71
4838 8278 0.625316 TTAGATGTGGGCAGGCATGT 59.375 50.000 0.00 0.00 0.00 3.21
4839 8279 1.315690 CTTAGATGTGGGCAGGCATG 58.684 55.000 0.00 0.00 0.00 4.06
4840 8280 0.921896 ACTTAGATGTGGGCAGGCAT 59.078 50.000 0.00 0.00 0.00 4.40
4841 8281 1.578897 TACTTAGATGTGGGCAGGCA 58.421 50.000 0.00 0.00 0.00 4.75
4842 8282 2.092914 ACTTACTTAGATGTGGGCAGGC 60.093 50.000 0.00 0.00 0.00 4.85
4843 8283 3.914426 ACTTACTTAGATGTGGGCAGG 57.086 47.619 0.00 0.00 0.00 4.85
4844 8284 5.452077 GGAGTACTTACTTAGATGTGGGCAG 60.452 48.000 0.00 0.00 36.50 4.85
4845 8285 4.404715 GGAGTACTTACTTAGATGTGGGCA 59.595 45.833 0.00 0.00 36.50 5.36
4846 8286 4.202233 GGGAGTACTTACTTAGATGTGGGC 60.202 50.000 0.00 0.00 36.50 5.36
4847 8287 5.209659 AGGGAGTACTTACTTAGATGTGGG 58.790 45.833 0.00 0.00 36.50 4.61
4848 8288 5.302313 GGAGGGAGTACTTACTTAGATGTGG 59.698 48.000 0.00 0.00 36.50 4.17
4849 8289 5.008811 CGGAGGGAGTACTTACTTAGATGTG 59.991 48.000 0.00 0.00 36.50 3.21
4850 8290 5.131784 CGGAGGGAGTACTTACTTAGATGT 58.868 45.833 0.00 0.00 36.50 3.06
4851 8291 5.131784 ACGGAGGGAGTACTTACTTAGATG 58.868 45.833 0.00 0.00 36.50 2.90
4852 8292 5.375773 GACGGAGGGAGTACTTACTTAGAT 58.624 45.833 0.00 0.00 36.50 1.98
4853 8293 4.384647 GGACGGAGGGAGTACTTACTTAGA 60.385 50.000 0.00 0.00 36.50 2.10
4854 8294 3.882288 GGACGGAGGGAGTACTTACTTAG 59.118 52.174 0.00 0.17 36.50 2.18
4855 8295 3.682718 CGGACGGAGGGAGTACTTACTTA 60.683 52.174 0.00 0.00 36.50 2.24
4856 8296 2.732763 GGACGGAGGGAGTACTTACTT 58.267 52.381 0.00 0.00 36.50 2.24
4857 8297 1.407989 CGGACGGAGGGAGTACTTACT 60.408 57.143 0.00 0.00 39.71 2.24
4858 8298 1.020437 CGGACGGAGGGAGTACTTAC 58.980 60.000 0.00 0.00 0.00 2.34
4859 8299 0.911769 TCGGACGGAGGGAGTACTTA 59.088 55.000 0.00 0.00 0.00 2.24
4860 8300 0.038744 TTCGGACGGAGGGAGTACTT 59.961 55.000 0.00 0.00 0.00 2.24
4861 8301 0.038744 TTTCGGACGGAGGGAGTACT 59.961 55.000 0.00 0.00 0.00 2.73
4862 8302 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
4863 8303 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
4864 8304 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
4879 8319 8.558973 TTTGTCCATTTTGATGACAAGTTTTT 57.441 26.923 0.00 0.00 37.13 1.94
4880 8320 8.558973 TTTTGTCCATTTTGATGACAAGTTTT 57.441 26.923 0.00 0.00 37.13 2.43
4881 8321 8.558973 TTTTTGTCCATTTTGATGACAAGTTT 57.441 26.923 0.00 0.00 37.13 2.66
4882 8322 7.280652 CCTTTTTGTCCATTTTGATGACAAGTT 59.719 33.333 0.00 0.00 37.13 2.66
4883 8323 6.762661 CCTTTTTGTCCATTTTGATGACAAGT 59.237 34.615 0.00 0.00 37.13 3.16
4884 8324 6.203338 CCCTTTTTGTCCATTTTGATGACAAG 59.797 38.462 0.00 0.00 37.13 3.16
4885 8325 6.054295 CCCTTTTTGTCCATTTTGATGACAA 58.946 36.000 0.00 0.00 34.47 3.18
4886 8326 5.454471 CCCCTTTTTGTCCATTTTGATGACA 60.454 40.000 0.00 0.00 0.00 3.58
4887 8327 4.996758 CCCCTTTTTGTCCATTTTGATGAC 59.003 41.667 0.00 0.00 0.00 3.06
4888 8328 4.657969 ACCCCTTTTTGTCCATTTTGATGA 59.342 37.500 0.00 0.00 0.00 2.92
4889 8329 4.756135 CACCCCTTTTTGTCCATTTTGATG 59.244 41.667 0.00 0.00 0.00 3.07
4890 8330 4.411869 ACACCCCTTTTTGTCCATTTTGAT 59.588 37.500 0.00 0.00 0.00 2.57
4891 8331 3.777522 ACACCCCTTTTTGTCCATTTTGA 59.222 39.130 0.00 0.00 0.00 2.69
4892 8332 4.149511 ACACCCCTTTTTGTCCATTTTG 57.850 40.909 0.00 0.00 0.00 2.44
4893 8333 5.843969 AGATACACCCCTTTTTGTCCATTTT 59.156 36.000 0.00 0.00 0.00 1.82
4894 8334 5.402630 AGATACACCCCTTTTTGTCCATTT 58.597 37.500 0.00 0.00 0.00 2.32
4895 8335 5.010708 AGATACACCCCTTTTTGTCCATT 57.989 39.130 0.00 0.00 0.00 3.16
4896 8336 4.675063 AGATACACCCCTTTTTGTCCAT 57.325 40.909 0.00 0.00 0.00 3.41
4897 8337 4.847512 TCTAGATACACCCCTTTTTGTCCA 59.152 41.667 0.00 0.00 0.00 4.02
4898 8338 5.431179 TCTAGATACACCCCTTTTTGTCC 57.569 43.478 0.00 0.00 0.00 4.02
4899 8339 6.473758 AGTTCTAGATACACCCCTTTTTGTC 58.526 40.000 0.00 0.00 0.00 3.18
4900 8340 6.449830 AGTTCTAGATACACCCCTTTTTGT 57.550 37.500 0.00 0.00 0.00 2.83
4901 8341 8.857694 TTTAGTTCTAGATACACCCCTTTTTG 57.142 34.615 0.00 0.00 0.00 2.44
4905 8345 9.275572 TGTATTTTAGTTCTAGATACACCCCTT 57.724 33.333 0.00 0.00 30.60 3.95
4906 8346 8.849543 TGTATTTTAGTTCTAGATACACCCCT 57.150 34.615 0.00 0.00 30.60 4.79
4907 8347 9.708092 GATGTATTTTAGTTCTAGATACACCCC 57.292 37.037 14.34 8.08 36.40 4.95
4921 8361 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.