Multiple sequence alignment - TraesCS3A01G413400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G413400 chr3A 100.000 5470 0 0 1 5470 656718232 656723701 0.000000e+00 10102.0
1 TraesCS3A01G413400 chr3B 93.541 3592 107 45 254 3794 687062312 687065829 0.000000e+00 5232.0
2 TraesCS3A01G413400 chr3B 95.205 1147 40 7 3814 4955 687065816 687066952 0.000000e+00 1799.0
3 TraesCS3A01G413400 chr3B 100.000 117 0 0 1 117 758762660 758762544 3.320000e-52 217.0
4 TraesCS3A01G413400 chr3B 93.103 145 10 0 114 258 34647573 34647429 4.290000e-51 213.0
5 TraesCS3A01G413400 chr3B 94.245 139 8 0 114 252 521701554 521701692 4.290000e-51 213.0
6 TraesCS3A01G413400 chr3B 98.305 118 2 0 1 118 237729642 237729525 2.000000e-49 207.0
7 TraesCS3A01G413400 chr3B 89.516 124 9 2 5060 5179 687066976 687067099 2.640000e-33 154.0
8 TraesCS3A01G413400 chr3B 95.238 63 3 0 5185 5247 687067319 687067381 3.490000e-17 100.0
9 TraesCS3A01G413400 chr3D 94.011 2705 88 33 259 2919 521315261 521317935 0.000000e+00 4030.0
10 TraesCS3A01G413400 chr3D 95.109 1145 46 6 3812 4955 521318916 521320051 0.000000e+00 1796.0
11 TraesCS3A01G413400 chr3D 93.590 858 28 8 2959 3794 521318079 521318931 0.000000e+00 1254.0
12 TraesCS3A01G413400 chr3D 92.529 174 6 2 5071 5241 521320143 521320312 5.470000e-60 243.0
13 TraesCS3A01G413400 chr3D 96.078 51 2 0 5265 5315 521320308 521320358 3.510000e-12 84.2
14 TraesCS3A01G413400 chr5B 92.715 302 21 1 1123 1424 308798995 308799295 8.410000e-118 435.0
15 TraesCS3A01G413400 chr5B 94.581 203 11 0 1526 1728 308799329 308799531 1.140000e-81 315.0
16 TraesCS3A01G413400 chr5B 97.222 36 1 0 1473 1508 308799296 308799331 1.650000e-05 62.1
17 TraesCS3A01G413400 chr7A 94.964 139 7 0 114 252 729525300 729525438 9.230000e-53 219.0
18 TraesCS3A01G413400 chr5A 94.366 142 8 0 114 255 379345691 379345550 9.230000e-53 219.0
19 TraesCS3A01G413400 chr5A 99.145 117 1 0 1 117 608656722 608656838 1.540000e-50 211.0
20 TraesCS3A01G413400 chr5A 96.032 126 3 1 1 126 54281745 54281622 2.580000e-48 204.0
21 TraesCS3A01G413400 chr6A 93.750 144 9 0 114 257 59323157 59323300 3.320000e-52 217.0
22 TraesCS3A01G413400 chr6B 93.151 146 10 0 114 259 637124709 637124854 1.190000e-51 215.0
23 TraesCS3A01G413400 chr1A 99.160 119 1 0 1 119 15080203 15080321 1.190000e-51 215.0
24 TraesCS3A01G413400 chr1A 98.319 119 2 0 1 119 15036811 15036929 5.550000e-50 209.0
25 TraesCS3A01G413400 chr1A 98.319 119 2 0 1 119 15124066 15124184 5.550000e-50 209.0
26 TraesCS3A01G413400 chr7B 100.000 115 0 0 1 115 653432451 653432565 4.290000e-51 213.0
27 TraesCS3A01G413400 chr2A 94.245 139 8 0 114 252 140577992 140578130 4.290000e-51 213.0
28 TraesCS3A01G413400 chr2A 94.245 139 8 0 114 252 641966450 641966588 4.290000e-51 213.0
29 TraesCS3A01G413400 chr2A 92.517 147 11 0 114 260 437629753 437629899 1.540000e-50 211.0
30 TraesCS3A01G413400 chr2A 96.721 122 4 0 1 122 42776803 42776924 2.580000e-48 204.0
31 TraesCS3A01G413400 chr7D 88.750 80 8 1 5355 5434 478051877 478051955 4.510000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G413400 chr3A 656718232 656723701 5469 False 10102.00 10102 100.000000 1 5470 1 chr3A.!!$F1 5469
1 TraesCS3A01G413400 chr3B 687062312 687067381 5069 False 1821.25 5232 93.375000 254 5247 4 chr3B.!!$F2 4993
2 TraesCS3A01G413400 chr3D 521315261 521320358 5097 False 1481.44 4030 94.263400 259 5315 5 chr3D.!!$F1 5056
3 TraesCS3A01G413400 chr5B 308798995 308799531 536 False 270.70 435 94.839333 1123 1728 3 chr5B.!!$F1 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
47 48 0.244450 ATGCATGCACCTTTCCAACG 59.756 50.0 25.37 0.00 0.0 4.10 F
91 92 0.252479 CTTGTGATGCTGAGAGGCCT 59.748 55.0 3.86 3.86 0.0 5.19 F
107 108 0.465287 GCCTAATAAACCCGGACGGA 59.535 55.0 13.13 0.00 37.5 4.69 F
119 120 0.536687 CGGACGGAGGGAGTATGCTA 60.537 60.0 0.00 0.00 0.0 3.49 F
661 670 0.820871 CTTCTTCCTCCCGAGACCAG 59.179 60.0 0.00 0.00 0.0 4.00 F
2464 2515 0.105224 TTCGAGTTCAAACAGCCCGA 59.895 50.0 0.00 0.00 0.0 5.14 F
4066 4284 0.107165 GTTCCTCCTATGCCACCCAC 60.107 60.0 0.00 0.00 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1789 1838 0.248866 GGACCTGCAAACAAACACCG 60.249 55.000 0.00 0.00 0.00 4.94 R
2035 2086 1.532505 GCCTGCGTGCAATTCACATAG 60.533 52.381 0.00 5.69 45.92 2.23 R
2174 2225 0.546747 TGGTAACCACCTCTCCCCTG 60.547 60.000 0.00 0.00 45.98 4.45 R
2252 2303 2.434331 CCCTTGCCCTTCCGTTCA 59.566 61.111 0.00 0.00 0.00 3.18 R
2769 2851 2.657484 CTTCGCCGGCGTCGATCTTA 62.657 60.000 44.16 23.32 40.74 2.10 R
4071 4289 0.096976 TAACACGGCGAGCTACGTAC 59.903 55.000 16.62 2.50 42.04 3.67 R
5247 5719 0.100503 AACTCAGGTGTTGCGTTTGC 59.899 50.000 0.00 0.00 43.20 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.701107 CCAATGAAATGGTTGCATGCA 58.299 42.857 18.46 18.46 35.65 3.96
33 34 3.275143 CCAATGAAATGGTTGCATGCAT 58.725 40.909 23.37 4.78 35.65 3.96
34 35 3.064682 CCAATGAAATGGTTGCATGCATG 59.935 43.478 23.37 22.70 35.65 4.06
35 36 6.495892 CCAATGAAATGGTTGCATGCATGC 62.496 45.833 38.71 38.71 43.53 4.06
46 47 1.717194 CATGCATGCACCTTTCCAAC 58.283 50.000 25.37 0.00 0.00 3.77
47 48 0.244450 ATGCATGCACCTTTCCAACG 59.756 50.000 25.37 0.00 0.00 4.10
48 49 1.734117 GCATGCACCTTTCCAACGC 60.734 57.895 14.21 0.00 0.00 4.84
49 50 1.080569 CATGCACCTTTCCAACGCC 60.081 57.895 0.00 0.00 0.00 5.68
50 51 2.625823 ATGCACCTTTCCAACGCCG 61.626 57.895 0.00 0.00 0.00 6.46
51 52 4.038080 GCACCTTTCCAACGCCGG 62.038 66.667 0.00 0.00 0.00 6.13
52 53 3.361977 CACCTTTCCAACGCCGGG 61.362 66.667 2.18 0.00 0.00 5.73
56 57 4.589675 TTTCCAACGCCGGGCCTT 62.590 61.111 14.55 5.30 0.00 4.35
57 58 3.193469 TTTCCAACGCCGGGCCTTA 62.193 57.895 14.55 0.00 0.00 2.69
58 59 2.487274 TTTCCAACGCCGGGCCTTAT 62.487 55.000 14.55 0.00 0.00 1.73
59 60 1.624479 TTCCAACGCCGGGCCTTATA 61.624 55.000 14.55 0.00 0.00 0.98
60 61 1.153127 CCAACGCCGGGCCTTATAA 60.153 57.895 14.55 0.00 0.00 0.98
61 62 0.748729 CCAACGCCGGGCCTTATAAA 60.749 55.000 14.55 0.00 0.00 1.40
62 63 1.096416 CAACGCCGGGCCTTATAAAA 58.904 50.000 14.55 0.00 0.00 1.52
63 64 1.064952 CAACGCCGGGCCTTATAAAAG 59.935 52.381 14.55 0.00 0.00 2.27
77 78 5.894807 CTTATAAAAGGGGACATGCTTGTG 58.105 41.667 10.37 0.00 35.79 3.33
78 79 2.380064 AAAAGGGGACATGCTTGTGA 57.620 45.000 10.37 0.00 35.79 3.58
79 80 2.610438 AAAGGGGACATGCTTGTGAT 57.390 45.000 10.37 0.00 35.79 3.06
80 81 1.843368 AAGGGGACATGCTTGTGATG 58.157 50.000 10.37 0.00 35.79 3.07
81 82 0.682209 AGGGGACATGCTTGTGATGC 60.682 55.000 10.37 0.00 35.79 3.91
82 83 0.682209 GGGGACATGCTTGTGATGCT 60.682 55.000 10.37 0.00 35.79 3.79
83 84 0.454600 GGGACATGCTTGTGATGCTG 59.545 55.000 10.37 0.00 35.79 4.41
84 85 1.456296 GGACATGCTTGTGATGCTGA 58.544 50.000 10.37 0.00 35.79 4.26
85 86 1.400846 GGACATGCTTGTGATGCTGAG 59.599 52.381 10.37 0.00 35.79 3.35
86 87 2.353323 GACATGCTTGTGATGCTGAGA 58.647 47.619 10.37 0.00 35.79 3.27
87 88 2.352034 GACATGCTTGTGATGCTGAGAG 59.648 50.000 10.37 0.00 35.79 3.20
88 89 1.671328 CATGCTTGTGATGCTGAGAGG 59.329 52.381 0.00 0.00 0.00 3.69
89 90 0.675837 TGCTTGTGATGCTGAGAGGC 60.676 55.000 0.00 0.00 0.00 4.70
90 91 1.375098 GCTTGTGATGCTGAGAGGCC 61.375 60.000 0.00 0.00 0.00 5.19
91 92 0.252479 CTTGTGATGCTGAGAGGCCT 59.748 55.000 3.86 3.86 0.00 5.19
92 93 1.483827 CTTGTGATGCTGAGAGGCCTA 59.516 52.381 4.42 0.00 0.00 3.93
93 94 1.571955 TGTGATGCTGAGAGGCCTAA 58.428 50.000 4.42 0.00 0.00 2.69
94 95 2.121948 TGTGATGCTGAGAGGCCTAAT 58.878 47.619 4.42 0.00 0.00 1.73
95 96 3.308401 TGTGATGCTGAGAGGCCTAATA 58.692 45.455 4.42 0.00 0.00 0.98
96 97 3.711190 TGTGATGCTGAGAGGCCTAATAA 59.289 43.478 4.42 0.00 0.00 1.40
97 98 4.164030 TGTGATGCTGAGAGGCCTAATAAA 59.836 41.667 4.42 0.00 0.00 1.40
98 99 4.513318 GTGATGCTGAGAGGCCTAATAAAC 59.487 45.833 4.42 0.00 0.00 2.01
99 100 3.560636 TGCTGAGAGGCCTAATAAACC 57.439 47.619 4.42 0.00 0.00 3.27
100 101 2.172717 TGCTGAGAGGCCTAATAAACCC 59.827 50.000 4.42 0.00 0.00 4.11
101 102 2.807108 GCTGAGAGGCCTAATAAACCCG 60.807 54.545 4.42 0.00 0.00 5.28
102 103 1.766496 TGAGAGGCCTAATAAACCCGG 59.234 52.381 4.42 0.00 0.00 5.73
103 104 2.044758 GAGAGGCCTAATAAACCCGGA 58.955 52.381 4.42 0.00 0.00 5.14
104 105 1.767088 AGAGGCCTAATAAACCCGGAC 59.233 52.381 4.42 0.00 0.00 4.79
105 106 0.466963 AGGCCTAATAAACCCGGACG 59.533 55.000 1.29 0.00 0.00 4.79
106 107 0.533531 GGCCTAATAAACCCGGACGG 60.534 60.000 0.73 3.25 37.81 4.79
107 108 0.465287 GCCTAATAAACCCGGACGGA 59.535 55.000 13.13 0.00 37.50 4.69
108 109 1.539712 GCCTAATAAACCCGGACGGAG 60.540 57.143 13.13 5.04 37.50 4.63
109 110 1.069668 CCTAATAAACCCGGACGGAGG 59.930 57.143 13.13 5.18 37.50 4.30
116 117 3.444737 CCGGACGGAGGGAGTATG 58.555 66.667 4.40 0.00 37.50 2.39
117 118 2.728817 CGGACGGAGGGAGTATGC 59.271 66.667 0.00 0.00 0.00 3.14
118 119 1.828660 CGGACGGAGGGAGTATGCT 60.829 63.158 0.00 0.00 0.00 3.79
119 120 0.536687 CGGACGGAGGGAGTATGCTA 60.537 60.000 0.00 0.00 0.00 3.49
120 121 0.960286 GGACGGAGGGAGTATGCTAC 59.040 60.000 0.00 0.00 0.00 3.58
121 122 1.479021 GGACGGAGGGAGTATGCTACT 60.479 57.143 0.00 0.00 42.86 2.57
122 123 2.308690 GACGGAGGGAGTATGCTACTT 58.691 52.381 0.00 0.00 39.59 2.24
123 124 2.694109 GACGGAGGGAGTATGCTACTTT 59.306 50.000 0.00 0.00 39.59 2.66
124 125 2.431057 ACGGAGGGAGTATGCTACTTTG 59.569 50.000 0.00 0.00 39.59 2.77
125 126 2.431057 CGGAGGGAGTATGCTACTTTGT 59.569 50.000 0.00 0.00 39.59 2.83
126 127 3.738281 CGGAGGGAGTATGCTACTTTGTG 60.738 52.174 0.00 0.00 39.59 3.33
127 128 3.197983 GGAGGGAGTATGCTACTTTGTGT 59.802 47.826 0.00 0.00 39.59 3.72
128 129 4.434520 GAGGGAGTATGCTACTTTGTGTC 58.565 47.826 0.00 0.00 39.59 3.67
129 130 3.838317 AGGGAGTATGCTACTTTGTGTCA 59.162 43.478 0.00 0.00 39.59 3.58
130 131 4.471386 AGGGAGTATGCTACTTTGTGTCAT 59.529 41.667 0.00 0.00 39.59 3.06
131 132 4.572389 GGGAGTATGCTACTTTGTGTCATG 59.428 45.833 0.00 0.00 39.59 3.07
132 133 4.034510 GGAGTATGCTACTTTGTGTCATGC 59.965 45.833 0.00 0.00 39.59 4.06
133 134 4.578871 AGTATGCTACTTTGTGTCATGCA 58.421 39.130 0.00 0.00 34.86 3.96
134 135 5.188434 AGTATGCTACTTTGTGTCATGCAT 58.812 37.500 0.00 0.00 40.50 3.96
135 136 3.835378 TGCTACTTTGTGTCATGCATG 57.165 42.857 21.07 21.07 0.00 4.06
136 137 3.410508 TGCTACTTTGTGTCATGCATGA 58.589 40.909 25.42 25.42 0.00 3.07
137 138 9.007811 AGTATGCTACTTTGTGTCATGCATGAC 62.008 40.741 40.53 40.53 45.73 3.06
203 204 9.368416 TGCATTAGAGAGGTACTATTATTCACT 57.632 33.333 0.00 0.00 41.55 3.41
238 239 8.530804 TGCATGATACTAGCATATGATACTCT 57.469 34.615 6.97 0.00 32.55 3.24
239 240 8.628280 TGCATGATACTAGCATATGATACTCTC 58.372 37.037 6.97 0.00 32.55 3.20
240 241 8.081633 GCATGATACTAGCATATGATACTCTCC 58.918 40.741 6.97 0.00 0.00 3.71
241 242 9.129532 CATGATACTAGCATATGATACTCTCCA 57.870 37.037 6.97 0.00 0.00 3.86
242 243 9.880254 ATGATACTAGCATATGATACTCTCCAT 57.120 33.333 6.97 0.39 0.00 3.41
243 244 9.706529 TGATACTAGCATATGATACTCTCCATT 57.293 33.333 6.97 0.00 0.00 3.16
246 247 8.885693 ACTAGCATATGATACTCTCCATTACA 57.114 34.615 6.97 0.00 0.00 2.41
247 248 9.314133 ACTAGCATATGATACTCTCCATTACAA 57.686 33.333 6.97 0.00 0.00 2.41
248 249 9.579768 CTAGCATATGATACTCTCCATTACAAC 57.420 37.037 6.97 0.00 0.00 3.32
249 250 7.390027 AGCATATGATACTCTCCATTACAACC 58.610 38.462 6.97 0.00 0.00 3.77
250 251 7.016563 AGCATATGATACTCTCCATTACAACCA 59.983 37.037 6.97 0.00 0.00 3.67
251 252 7.332926 GCATATGATACTCTCCATTACAACCAG 59.667 40.741 6.97 0.00 0.00 4.00
252 253 5.614324 TGATACTCTCCATTACAACCAGG 57.386 43.478 0.00 0.00 0.00 4.45
253 254 2.789409 ACTCTCCATTACAACCAGGC 57.211 50.000 0.00 0.00 0.00 4.85
254 255 2.269940 ACTCTCCATTACAACCAGGCT 58.730 47.619 0.00 0.00 0.00 4.58
255 256 2.026822 ACTCTCCATTACAACCAGGCTG 60.027 50.000 7.75 7.75 0.00 4.85
256 257 2.237143 CTCTCCATTACAACCAGGCTGA 59.763 50.000 17.94 0.00 0.00 4.26
257 258 2.027192 TCTCCATTACAACCAGGCTGAC 60.027 50.000 17.94 0.00 0.00 3.51
273 274 6.349777 CCAGGCTGACCGAAATAATTTTTACA 60.350 38.462 17.94 0.00 42.76 2.41
279 280 8.568676 TGACCGAAATAATTTTTACAGGATCA 57.431 30.769 0.00 0.00 0.00 2.92
288 289 2.396590 TTACAGGATCAGTTTCGCCC 57.603 50.000 0.00 0.00 0.00 6.13
297 298 3.053291 GTTTCGCCCGATGCCACA 61.053 61.111 0.00 0.00 36.24 4.17
298 299 2.045438 TTTCGCCCGATGCCACAT 60.045 55.556 0.00 0.00 36.24 3.21
345 346 5.097529 CGAGCCGTATACTGTTTTTGTAGA 58.902 41.667 0.56 0.00 0.00 2.59
349 350 4.266976 CCGTATACTGTTTTTGTAGAGGCG 59.733 45.833 0.56 0.00 0.00 5.52
376 380 2.621998 TGCGGTATAACCTAGAGCTGTC 59.378 50.000 0.00 0.00 35.66 3.51
453 460 4.626042 ACAGCAGAGAGTTTCTTACAGTG 58.374 43.478 0.00 0.00 32.41 3.66
454 461 4.342378 ACAGCAGAGAGTTTCTTACAGTGA 59.658 41.667 0.00 0.00 32.41 3.41
456 463 5.176590 CAGCAGAGAGTTTCTTACAGTGAAC 59.823 44.000 0.00 0.00 32.41 3.18
457 464 4.149046 GCAGAGAGTTTCTTACAGTGAACG 59.851 45.833 0.00 0.00 32.41 3.95
458 465 5.282510 CAGAGAGTTTCTTACAGTGAACGT 58.717 41.667 0.00 0.00 32.41 3.99
460 467 6.579292 CAGAGAGTTTCTTACAGTGAACGTAG 59.421 42.308 0.00 0.00 32.41 3.51
503 512 2.625737 AGAAGATCCGTGCAACATGAG 58.374 47.619 0.00 0.00 35.74 2.90
504 513 2.234661 AGAAGATCCGTGCAACATGAGA 59.765 45.455 0.00 0.00 35.74 3.27
515 524 2.159234 GCAACATGAGACACAAGAGCTC 59.841 50.000 5.27 5.27 0.00 4.09
526 535 4.381411 ACACAAGAGCTCTAACAAACTCC 58.619 43.478 18.59 0.00 0.00 3.85
658 667 1.139947 CGCTTCTTCCTCCCGAGAC 59.860 63.158 0.00 0.00 0.00 3.36
659 668 1.518302 GCTTCTTCCTCCCGAGACC 59.482 63.158 0.00 0.00 0.00 3.85
660 669 1.258445 GCTTCTTCCTCCCGAGACCA 61.258 60.000 0.00 0.00 0.00 4.02
661 670 0.820871 CTTCTTCCTCCCGAGACCAG 59.179 60.000 0.00 0.00 0.00 4.00
800 818 4.760220 CCAGCCCCAGGTACCCCT 62.760 72.222 8.74 0.00 44.02 4.79
803 821 4.752594 GCCCCAGGTACCCCTCCA 62.753 72.222 8.74 0.00 39.89 3.86
804 822 2.691252 CCCCAGGTACCCCTCCAC 60.691 72.222 8.74 0.00 39.89 4.02
805 823 2.691252 CCCAGGTACCCCTCCACC 60.691 72.222 8.74 0.00 39.89 4.61
835 853 1.457346 CACAGCTAAGCAAGAAGGGG 58.543 55.000 0.00 0.00 0.00 4.79
921 939 3.670377 GGTTTGCAGCCACGACCC 61.670 66.667 4.72 0.00 0.00 4.46
1071 1089 1.803289 GGGAGCGCCTCAAAACATC 59.197 57.895 2.29 0.00 31.08 3.06
1092 1110 3.760035 GACGCCGGAGCTCAGGAA 61.760 66.667 33.73 0.00 36.60 3.36
1772 1821 1.200020 GAACCCTTCTCGCCACAATTG 59.800 52.381 3.24 3.24 0.00 2.32
1779 1828 1.066858 TCTCGCCACAATTGTCCTCTC 60.067 52.381 8.48 0.00 0.00 3.20
1789 1838 1.899437 TTGTCCTCTCATGCCCGACC 61.899 60.000 0.00 0.00 0.00 4.79
1878 1927 2.048597 TTCTTCGACACGCGCCAT 60.049 55.556 5.73 0.00 40.61 4.40
1957 2006 2.357517 AGTTCACGCGCCCTTCTG 60.358 61.111 5.73 0.00 0.00 3.02
2464 2515 0.105224 TTCGAGTTCAAACAGCCCGA 59.895 50.000 0.00 0.00 0.00 5.14
2520 2592 1.563173 GACACGGACACGCAAGAAC 59.437 57.895 0.00 0.00 46.04 3.01
2639 2721 1.624336 ATTTCATGGGCGCATGCTAT 58.376 45.000 32.60 24.67 42.25 2.97
2640 2722 0.669619 TTTCATGGGCGCATGCTATG 59.330 50.000 32.60 15.73 42.25 2.23
2696 2778 1.529244 GCCTTGTGTGCCTGACCTT 60.529 57.895 0.00 0.00 0.00 3.50
2713 2795 4.058817 GACCTTGTGATCTCTTGTTCGTT 58.941 43.478 0.00 0.00 0.00 3.85
2769 2851 3.002791 CCACTGCATCGAGTACAACAAT 58.997 45.455 0.00 0.00 0.00 2.71
2852 2934 4.164988 CCCCATAGATTTCAAGTGAGTCCT 59.835 45.833 0.00 0.00 0.00 3.85
2874 2956 3.879295 TCCAACTATAAGCTGCTGCATTC 59.121 43.478 18.42 0.00 42.74 2.67
2875 2957 3.303593 CCAACTATAAGCTGCTGCATTCG 60.304 47.826 18.42 4.59 42.74 3.34
2876 2958 3.185246 ACTATAAGCTGCTGCATTCGT 57.815 42.857 18.42 5.20 42.74 3.85
2877 2959 3.535561 ACTATAAGCTGCTGCATTCGTT 58.464 40.909 18.42 5.36 42.74 3.85
2893 2979 5.278169 GCATTCGTTCATATTTCATGGAGCT 60.278 40.000 0.00 0.00 0.00 4.09
2896 2982 5.614308 TCGTTCATATTTCATGGAGCTCAT 58.386 37.500 17.19 4.42 36.31 2.90
2911 2997 1.877637 CTCATTCCCACGAACACACA 58.122 50.000 0.00 0.00 0.00 3.72
2922 3008 4.272504 CCACGAACACACACTCAATTTACT 59.727 41.667 0.00 0.00 0.00 2.24
2923 3009 5.432157 CACGAACACACACTCAATTTACTC 58.568 41.667 0.00 0.00 0.00 2.59
2924 3010 5.006261 CACGAACACACACTCAATTTACTCA 59.994 40.000 0.00 0.00 0.00 3.41
2925 3011 5.583061 ACGAACACACACTCAATTTACTCAA 59.417 36.000 0.00 0.00 0.00 3.02
2927 3013 7.132213 CGAACACACACTCAATTTACTCAATT 58.868 34.615 0.00 0.00 35.24 2.32
2928 3014 7.643764 CGAACACACACTCAATTTACTCAATTT 59.356 33.333 0.00 0.00 32.24 1.82
2929 3015 8.633075 AACACACACTCAATTTACTCAATTTG 57.367 30.769 0.00 0.00 32.24 2.32
2930 3016 6.697019 ACACACACTCAATTTACTCAATTTGC 59.303 34.615 0.00 0.00 32.24 3.68
2931 3017 6.696583 CACACACTCAATTTACTCAATTTGCA 59.303 34.615 0.00 0.00 32.24 4.08
2934 3020 8.767085 CACACTCAATTTACTCAATTTGCAAAT 58.233 29.630 18.99 18.99 32.24 2.32
2935 3021 9.328845 ACACTCAATTTACTCAATTTGCAAATT 57.671 25.926 27.73 27.73 39.07 1.82
2979 3169 7.286546 TGGTTCAATTGAGGTAGAAAAATGTGA 59.713 33.333 8.41 0.00 0.00 3.58
3063 3253 0.257328 TTTGAGCTTGTGTGGGGTGA 59.743 50.000 0.00 0.00 0.00 4.02
3352 3546 1.455402 TTGCTTTGCACAGCCCTCA 60.455 52.632 21.57 0.15 38.71 3.86
3454 3652 1.317613 AGCGGTGAAAAGTTGCATCA 58.682 45.000 0.00 0.00 0.00 3.07
3455 3653 1.888512 AGCGGTGAAAAGTTGCATCAT 59.111 42.857 0.00 0.00 0.00 2.45
3534 3732 7.011389 GGCTAATTTCAAGCACACTTTCTTTTT 59.989 33.333 1.35 0.00 41.93 1.94
3710 3910 4.278975 AGCTTTTGACCTCTCCAACTAG 57.721 45.455 0.00 0.00 0.00 2.57
3814 4032 4.688770 TTTTTGCGGGGAAGTGGT 57.311 50.000 0.00 0.00 0.00 4.16
3815 4033 3.823369 TTTTTGCGGGGAAGTGGTA 57.177 47.368 0.00 0.00 0.00 3.25
3816 4034 2.296073 TTTTTGCGGGGAAGTGGTAT 57.704 45.000 0.00 0.00 0.00 2.73
3817 4035 2.296073 TTTTGCGGGGAAGTGGTATT 57.704 45.000 0.00 0.00 0.00 1.89
3818 4036 3.436577 TTTTGCGGGGAAGTGGTATTA 57.563 42.857 0.00 0.00 0.00 0.98
3991 4209 1.663388 CTGCCAAGTCACGTACGCA 60.663 57.895 16.72 0.00 0.00 5.24
4048 4266 3.119245 GCATGCCATGAATCTTGACAAGT 60.119 43.478 9.33 0.00 0.00 3.16
4050 4268 4.771590 TGCCATGAATCTTGACAAGTTC 57.228 40.909 14.75 16.07 0.00 3.01
4052 4270 3.760684 GCCATGAATCTTGACAAGTTCCT 59.239 43.478 14.75 8.28 0.00 3.36
4063 4281 1.282157 ACAAGTTCCTCCTATGCCACC 59.718 52.381 0.00 0.00 0.00 4.61
4064 4282 0.919710 AAGTTCCTCCTATGCCACCC 59.080 55.000 0.00 0.00 0.00 4.61
4065 4283 0.253160 AGTTCCTCCTATGCCACCCA 60.253 55.000 0.00 0.00 0.00 4.51
4066 4284 0.107165 GTTCCTCCTATGCCACCCAC 60.107 60.000 0.00 0.00 0.00 4.61
4067 4285 0.548926 TTCCTCCTATGCCACCCACA 60.549 55.000 0.00 0.00 0.00 4.17
4068 4286 0.982852 TCCTCCTATGCCACCCACAG 60.983 60.000 0.00 0.00 0.00 3.66
4069 4287 1.153086 CTCCTATGCCACCCACAGC 60.153 63.158 0.00 0.00 0.00 4.40
4070 4288 1.913951 CTCCTATGCCACCCACAGCA 61.914 60.000 0.00 0.00 44.45 4.41
4071 4289 1.452651 CCTATGCCACCCACAGCAG 60.453 63.158 0.00 0.00 43.38 4.24
4100 4318 3.739494 CTCGCCGTGTTAATTAACCAAC 58.261 45.455 22.47 14.93 35.37 3.77
4184 4404 3.812019 AGCGACGAGTACCTGCCG 61.812 66.667 0.00 0.00 0.00 5.69
4188 4408 2.282674 ACGAGTACCTGCCGGTGA 60.283 61.111 10.50 0.00 45.18 4.02
4744 4971 4.740695 GTCATTCATTCGTACTAGCTGGAC 59.259 45.833 3.17 0.00 0.00 4.02
4823 5051 3.412386 TCTTTGAAACTTGGAGCTAGCC 58.588 45.455 12.13 2.59 0.00 3.93
4824 5052 2.949177 TTGAAACTTGGAGCTAGCCA 57.051 45.000 12.13 0.00 35.78 4.75
4825 5053 2.479566 TGAAACTTGGAGCTAGCCAG 57.520 50.000 12.13 5.20 39.52 4.85
4851 5079 5.852827 AGCTAGACTATTCTTCTTCATGCC 58.147 41.667 0.00 0.00 32.75 4.40
4901 5129 5.222631 AGTTTTACGTACTCCGAATTTCGT 58.777 37.500 16.89 2.18 38.40 3.85
4902 5130 5.691754 AGTTTTACGTACTCCGAATTTCGTT 59.308 36.000 16.89 4.40 38.40 3.85
4903 5131 5.745653 TTTACGTACTCCGAATTTCGTTC 57.254 39.130 16.89 2.90 38.40 3.95
4904 5132 3.565905 ACGTACTCCGAATTTCGTTCT 57.434 42.857 16.89 2.04 38.40 3.01
4905 5133 3.905784 ACGTACTCCGAATTTCGTTCTT 58.094 40.909 16.89 2.13 38.40 2.52
4907 5135 3.916172 CGTACTCCGAATTTCGTTCTTCA 59.084 43.478 16.89 0.00 38.40 3.02
4925 5153 7.653311 CGTTCTTCATGTGATGGTAATGATAGA 59.347 37.037 0.00 0.00 30.76 1.98
4969 5223 2.832129 TCTCTCTGCCGAATTACCAACT 59.168 45.455 0.00 0.00 0.00 3.16
4972 5226 4.021229 TCTCTGCCGAATTACCAACTCTA 58.979 43.478 0.00 0.00 0.00 2.43
4973 5227 4.649674 TCTCTGCCGAATTACCAACTCTAT 59.350 41.667 0.00 0.00 0.00 1.98
4974 5228 4.693283 TCTGCCGAATTACCAACTCTATG 58.307 43.478 0.00 0.00 0.00 2.23
4975 5229 4.161565 TCTGCCGAATTACCAACTCTATGT 59.838 41.667 0.00 0.00 0.00 2.29
5000 5254 4.742012 TCCATTTTGTTTACTTGGCCCTA 58.258 39.130 0.00 0.00 0.00 3.53
5020 5274 5.104817 CCCTAATTTGCATTCATGTTCCCTT 60.105 40.000 0.00 0.00 0.00 3.95
5021 5275 6.098124 CCCTAATTTGCATTCATGTTCCCTTA 59.902 38.462 0.00 0.00 0.00 2.69
5022 5276 7.364585 CCCTAATTTGCATTCATGTTCCCTTAA 60.365 37.037 0.00 0.00 0.00 1.85
5023 5277 7.707893 CCTAATTTGCATTCATGTTCCCTTAAG 59.292 37.037 0.00 0.00 0.00 1.85
5024 5278 6.855763 ATTTGCATTCATGTTCCCTTAAGA 57.144 33.333 3.36 0.00 0.00 2.10
5025 5279 6.855763 TTTGCATTCATGTTCCCTTAAGAT 57.144 33.333 3.36 0.00 0.00 2.40
5026 5280 6.855763 TTGCATTCATGTTCCCTTAAGATT 57.144 33.333 3.36 0.00 0.00 2.40
5027 5281 6.855763 TGCATTCATGTTCCCTTAAGATTT 57.144 33.333 3.36 0.00 0.00 2.17
5028 5282 7.243604 TGCATTCATGTTCCCTTAAGATTTT 57.756 32.000 3.36 0.00 0.00 1.82
5029 5283 7.678837 TGCATTCATGTTCCCTTAAGATTTTT 58.321 30.769 3.36 0.00 0.00 1.94
5030 5284 8.811017 TGCATTCATGTTCCCTTAAGATTTTTA 58.189 29.630 3.36 0.00 0.00 1.52
5031 5285 9.822185 GCATTCATGTTCCCTTAAGATTTTTAT 57.178 29.630 3.36 0.00 0.00 1.40
5049 5303 7.556733 TTTTTATTCGCCCATTTCGTAGTAT 57.443 32.000 0.00 0.00 0.00 2.12
5050 5304 6.533819 TTTATTCGCCCATTTCGTAGTATG 57.466 37.500 0.00 0.00 0.00 2.39
5051 5305 3.804786 TTCGCCCATTTCGTAGTATGA 57.195 42.857 0.00 0.00 0.00 2.15
5052 5306 3.804786 TCGCCCATTTCGTAGTATGAA 57.195 42.857 0.40 0.40 0.00 2.57
5053 5307 4.126208 TCGCCCATTTCGTAGTATGAAA 57.874 40.909 17.69 17.69 37.49 2.69
5054 5308 4.505808 TCGCCCATTTCGTAGTATGAAAA 58.494 39.130 18.94 5.76 36.76 2.29
5055 5309 5.120399 TCGCCCATTTCGTAGTATGAAAAT 58.880 37.500 18.94 7.50 36.76 1.82
5056 5310 6.282167 TCGCCCATTTCGTAGTATGAAAATA 58.718 36.000 18.94 0.20 36.76 1.40
5057 5311 6.932400 TCGCCCATTTCGTAGTATGAAAATAT 59.068 34.615 18.94 3.20 36.76 1.28
5058 5312 8.089597 TCGCCCATTTCGTAGTATGAAAATATA 58.910 33.333 18.94 0.00 36.76 0.86
5069 5323 7.615582 AGTATGAAAATATATCATGCGGGTG 57.384 36.000 12.09 0.00 42.50 4.61
5151 5408 9.819267 ATTTAGTAGTTAGTAGTTCAATGGAGC 57.181 33.333 0.00 0.00 0.00 4.70
5180 5437 1.131638 AGCTCACTTGGACTTGGTCA 58.868 50.000 0.14 0.00 33.68 4.02
5203 5675 6.668283 TCAAGCAGTAGGTCCTAAAATACTCT 59.332 38.462 0.00 0.00 0.00 3.24
5247 5719 3.252215 TCGAAGCAGTTGTTTAATGTGGG 59.748 43.478 0.00 0.00 0.00 4.61
5248 5720 3.317150 GAAGCAGTTGTTTAATGTGGGC 58.683 45.455 0.00 0.00 0.00 5.36
5249 5721 2.315176 AGCAGTTGTTTAATGTGGGCA 58.685 42.857 0.00 0.00 0.00 5.36
5250 5722 2.697751 AGCAGTTGTTTAATGTGGGCAA 59.302 40.909 0.00 0.00 0.00 4.52
5251 5723 3.133721 AGCAGTTGTTTAATGTGGGCAAA 59.866 39.130 0.00 0.00 0.00 3.68
5252 5724 3.247411 GCAGTTGTTTAATGTGGGCAAAC 59.753 43.478 0.00 0.00 33.70 2.93
5253 5725 3.489047 CAGTTGTTTAATGTGGGCAAACG 59.511 43.478 0.00 0.00 35.41 3.60
5254 5726 2.141535 TGTTTAATGTGGGCAAACGC 57.858 45.000 0.00 0.00 35.41 4.84
5255 5727 1.409064 TGTTTAATGTGGGCAAACGCA 59.591 42.857 0.00 0.00 35.41 5.24
5256 5728 2.159099 TGTTTAATGTGGGCAAACGCAA 60.159 40.909 0.00 0.00 40.88 4.85
5257 5729 2.141535 TTAATGTGGGCAAACGCAAC 57.858 45.000 0.00 0.00 40.88 4.17
5258 5730 1.032794 TAATGTGGGCAAACGCAACA 58.967 45.000 0.00 0.00 40.88 3.33
5259 5731 0.529555 AATGTGGGCAAACGCAACAC 60.530 50.000 0.00 0.00 40.88 3.32
5260 5732 2.279186 GTGGGCAAACGCAACACC 60.279 61.111 0.00 0.00 40.88 4.16
5261 5733 2.441164 TGGGCAAACGCAACACCT 60.441 55.556 0.00 0.00 35.51 4.00
5262 5734 2.027460 GGGCAAACGCAACACCTG 59.973 61.111 0.00 0.00 0.00 4.00
5263 5735 2.485795 GGGCAAACGCAACACCTGA 61.486 57.895 0.00 0.00 0.00 3.86
5264 5736 1.008538 GGCAAACGCAACACCTGAG 60.009 57.895 0.00 0.00 0.00 3.35
5265 5737 1.724582 GGCAAACGCAACACCTGAGT 61.725 55.000 0.00 0.00 40.15 3.41
5270 5742 3.896648 AACGCAACACCTGAGTTTATG 57.103 42.857 0.00 0.00 44.63 1.90
5271 5743 2.846193 ACGCAACACCTGAGTTTATGT 58.154 42.857 0.00 0.00 33.82 2.29
5315 5787 5.652994 TGGGTTCCAAATTATGTTGTAGC 57.347 39.130 0.00 0.00 0.00 3.58
5316 5788 5.080337 TGGGTTCCAAATTATGTTGTAGCA 58.920 37.500 0.00 0.00 0.00 3.49
5317 5789 5.184864 TGGGTTCCAAATTATGTTGTAGCAG 59.815 40.000 0.00 0.00 0.00 4.24
5318 5790 5.185056 GGGTTCCAAATTATGTTGTAGCAGT 59.815 40.000 0.00 0.00 0.00 4.40
5319 5791 6.322491 GGTTCCAAATTATGTTGTAGCAGTC 58.678 40.000 0.00 0.00 0.00 3.51
5320 5792 6.322491 GTTCCAAATTATGTTGTAGCAGTCC 58.678 40.000 0.00 0.00 0.00 3.85
5321 5793 4.947388 TCCAAATTATGTTGTAGCAGTCCC 59.053 41.667 0.00 0.00 0.00 4.46
5322 5794 4.949856 CCAAATTATGTTGTAGCAGTCCCT 59.050 41.667 0.00 0.00 0.00 4.20
5323 5795 5.066505 CCAAATTATGTTGTAGCAGTCCCTC 59.933 44.000 0.00 0.00 0.00 4.30
5324 5796 3.906720 TTATGTTGTAGCAGTCCCTCC 57.093 47.619 0.00 0.00 0.00 4.30
5325 5797 0.537188 ATGTTGTAGCAGTCCCTCCG 59.463 55.000 0.00 0.00 0.00 4.63
5326 5798 0.830444 TGTTGTAGCAGTCCCTCCGT 60.830 55.000 0.00 0.00 0.00 4.69
5327 5799 0.320697 GTTGTAGCAGTCCCTCCGTT 59.679 55.000 0.00 0.00 0.00 4.44
5328 5800 1.053424 TTGTAGCAGTCCCTCCGTTT 58.947 50.000 0.00 0.00 0.00 3.60
5329 5801 1.053424 TGTAGCAGTCCCTCCGTTTT 58.947 50.000 0.00 0.00 0.00 2.43
5330 5802 1.270625 TGTAGCAGTCCCTCCGTTTTG 60.271 52.381 0.00 0.00 0.00 2.44
5331 5803 1.001633 GTAGCAGTCCCTCCGTTTTGA 59.998 52.381 0.00 0.00 0.00 2.69
5332 5804 0.693049 AGCAGTCCCTCCGTTTTGAT 59.307 50.000 0.00 0.00 0.00 2.57
5333 5805 0.804989 GCAGTCCCTCCGTTTTGATG 59.195 55.000 0.00 0.00 0.00 3.07
5334 5806 0.804989 CAGTCCCTCCGTTTTGATGC 59.195 55.000 0.00 0.00 0.00 3.91
5335 5807 0.400213 AGTCCCTCCGTTTTGATGCA 59.600 50.000 0.00 0.00 0.00 3.96
5336 5808 1.004745 AGTCCCTCCGTTTTGATGCAT 59.995 47.619 0.00 0.00 0.00 3.96
5337 5809 1.818674 GTCCCTCCGTTTTGATGCATT 59.181 47.619 0.00 0.00 0.00 3.56
5338 5810 3.013921 GTCCCTCCGTTTTGATGCATTA 58.986 45.455 0.00 0.00 0.00 1.90
5339 5811 3.065371 GTCCCTCCGTTTTGATGCATTAG 59.935 47.826 0.00 0.00 0.00 1.73
5340 5812 2.358898 CCCTCCGTTTTGATGCATTAGG 59.641 50.000 0.00 0.00 0.00 2.69
5341 5813 2.223572 CCTCCGTTTTGATGCATTAGGC 60.224 50.000 0.00 0.00 45.13 3.93
5355 5827 4.787598 GCATTAGGCATCTAACGAATTGG 58.212 43.478 0.00 0.00 43.97 3.16
5356 5828 4.275936 GCATTAGGCATCTAACGAATTGGT 59.724 41.667 0.00 0.00 43.97 3.67
5357 5829 5.751680 CATTAGGCATCTAACGAATTGGTG 58.248 41.667 0.00 0.00 38.19 4.17
5358 5830 3.627395 AGGCATCTAACGAATTGGTGA 57.373 42.857 0.00 0.00 0.00 4.02
5359 5831 3.950397 AGGCATCTAACGAATTGGTGAA 58.050 40.909 0.00 0.00 0.00 3.18
5360 5832 4.526970 AGGCATCTAACGAATTGGTGAAT 58.473 39.130 0.00 0.00 0.00 2.57
5361 5833 4.949856 AGGCATCTAACGAATTGGTGAATT 59.050 37.500 0.00 0.00 34.29 2.17
5362 5834 6.119536 AGGCATCTAACGAATTGGTGAATTA 58.880 36.000 0.00 0.00 31.58 1.40
5363 5835 6.260936 AGGCATCTAACGAATTGGTGAATTAG 59.739 38.462 0.00 0.00 31.58 1.73
5364 5836 6.430451 GCATCTAACGAATTGGTGAATTAGG 58.570 40.000 0.00 0.00 31.58 2.69
5365 5837 6.430451 CATCTAACGAATTGGTGAATTAGGC 58.570 40.000 0.00 0.00 31.58 3.93
5366 5838 5.492895 TCTAACGAATTGGTGAATTAGGCA 58.507 37.500 0.00 0.00 31.58 4.75
5367 5839 6.119536 TCTAACGAATTGGTGAATTAGGCAT 58.880 36.000 0.00 0.00 31.58 4.40
5368 5840 4.900635 ACGAATTGGTGAATTAGGCATC 57.099 40.909 0.00 0.00 31.58 3.91
5369 5841 4.526970 ACGAATTGGTGAATTAGGCATCT 58.473 39.130 0.00 0.00 31.58 2.90
5370 5842 5.680619 ACGAATTGGTGAATTAGGCATCTA 58.319 37.500 0.00 0.00 31.58 1.98
5371 5843 6.119536 ACGAATTGGTGAATTAGGCATCTAA 58.880 36.000 0.00 0.00 39.51 2.10
5372 5844 6.772716 ACGAATTGGTGAATTAGGCATCTAAT 59.227 34.615 0.00 0.00 45.32 1.73
5373 5845 7.080099 CGAATTGGTGAATTAGGCATCTAATG 58.920 38.462 0.14 0.00 43.31 1.90
5374 5846 7.041167 CGAATTGGTGAATTAGGCATCTAATGA 60.041 37.037 0.14 0.00 43.31 2.57
5375 5847 8.537728 AATTGGTGAATTAGGCATCTAATGAA 57.462 30.769 0.14 0.00 43.31 2.57
5376 5848 7.953005 TTGGTGAATTAGGCATCTAATGAAA 57.047 32.000 0.14 0.00 43.31 2.69
5377 5849 7.953005 TGGTGAATTAGGCATCTAATGAAAA 57.047 32.000 0.14 0.00 43.31 2.29
5378 5850 8.359875 TGGTGAATTAGGCATCTAATGAAAAA 57.640 30.769 0.14 0.00 43.31 1.94
5379 5851 8.980596 TGGTGAATTAGGCATCTAATGAAAAAT 58.019 29.630 0.14 0.00 43.31 1.82
5380 5852 9.468532 GGTGAATTAGGCATCTAATGAAAAATC 57.531 33.333 0.14 0.00 43.31 2.17
5398 5870 9.474920 TGAAAAATCAAATAATCTCAAAACGCT 57.525 25.926 0.00 0.00 0.00 5.07
5402 5874 9.573133 AAATCAAATAATCTCAAAACGCTAAGG 57.427 29.630 0.00 0.00 0.00 2.69
5403 5875 6.551736 TCAAATAATCTCAAAACGCTAAGGC 58.448 36.000 0.00 0.00 0.00 4.35
5404 5876 6.150307 TCAAATAATCTCAAAACGCTAAGGCA 59.850 34.615 0.00 0.00 38.60 4.75
5405 5877 3.831715 AATCTCAAAACGCTAAGGCAC 57.168 42.857 0.00 0.00 38.60 5.01
5406 5878 1.144969 TCTCAAAACGCTAAGGCACG 58.855 50.000 0.00 0.00 38.60 5.34
5407 5879 0.865769 CTCAAAACGCTAAGGCACGT 59.134 50.000 0.00 0.00 46.07 4.49
5408 5880 2.063266 CTCAAAACGCTAAGGCACGTA 58.937 47.619 0.00 0.00 42.68 3.57
5409 5881 2.477375 CTCAAAACGCTAAGGCACGTAA 59.523 45.455 0.00 0.00 42.68 3.18
5410 5882 2.221517 TCAAAACGCTAAGGCACGTAAC 59.778 45.455 0.00 0.00 42.68 2.50
5411 5883 1.868469 AAACGCTAAGGCACGTAACA 58.132 45.000 0.00 0.00 42.68 2.41
5412 5884 1.868469 AACGCTAAGGCACGTAACAA 58.132 45.000 0.00 0.00 42.68 2.83
5413 5885 2.088950 ACGCTAAGGCACGTAACAAT 57.911 45.000 0.00 0.00 41.48 2.71
5414 5886 3.235157 ACGCTAAGGCACGTAACAATA 57.765 42.857 0.00 0.00 41.48 1.90
5415 5887 3.184541 ACGCTAAGGCACGTAACAATAG 58.815 45.455 0.00 0.00 41.48 1.73
5416 5888 3.184541 CGCTAAGGCACGTAACAATAGT 58.815 45.455 0.00 0.00 38.60 2.12
5417 5889 4.142403 ACGCTAAGGCACGTAACAATAGTA 60.142 41.667 0.00 0.00 41.48 1.82
5418 5890 4.980434 CGCTAAGGCACGTAACAATAGTAT 59.020 41.667 0.00 0.00 38.60 2.12
5419 5891 5.461078 CGCTAAGGCACGTAACAATAGTATT 59.539 40.000 0.00 0.00 38.60 1.89
5420 5892 6.638063 CGCTAAGGCACGTAACAATAGTATTA 59.362 38.462 0.00 0.00 38.60 0.98
5421 5893 7.149015 CGCTAAGGCACGTAACAATAGTATTAG 60.149 40.741 0.00 0.00 38.60 1.73
5422 5894 7.650903 GCTAAGGCACGTAACAATAGTATTAGT 59.349 37.037 0.00 0.00 38.54 2.24
5423 5895 9.525409 CTAAGGCACGTAACAATAGTATTAGTT 57.475 33.333 12.34 12.34 0.00 2.24
5424 5896 7.766219 AGGCACGTAACAATAGTATTAGTTG 57.234 36.000 15.27 1.80 0.00 3.16
5425 5897 6.257193 AGGCACGTAACAATAGTATTAGTTGC 59.743 38.462 15.27 13.66 0.00 4.17
5426 5898 6.036300 GGCACGTAACAATAGTATTAGTTGCA 59.964 38.462 17.50 0.00 0.00 4.08
5427 5899 7.254658 GGCACGTAACAATAGTATTAGTTGCAT 60.255 37.037 17.50 7.49 0.00 3.96
5428 5900 7.582679 GCACGTAACAATAGTATTAGTTGCATG 59.417 37.037 17.50 15.25 0.00 4.06
5429 5901 7.582679 CACGTAACAATAGTATTAGTTGCATGC 59.417 37.037 11.82 11.82 0.00 4.06
5430 5902 7.279090 ACGTAACAATAGTATTAGTTGCATGCA 59.721 33.333 18.46 18.46 0.00 3.96
5431 5903 8.282592 CGTAACAATAGTATTAGTTGCATGCAT 58.717 33.333 23.37 10.46 0.00 3.96
5435 5907 9.506018 ACAATAGTATTAGTTGCATGCATATCA 57.494 29.630 23.37 2.82 0.00 2.15
5445 5917 8.173542 AGTTGCATGCATATCAAATAATCTCA 57.826 30.769 23.37 0.00 0.00 3.27
5446 5918 8.635328 AGTTGCATGCATATCAAATAATCTCAA 58.365 29.630 23.37 0.00 0.00 3.02
5447 5919 9.251792 GTTGCATGCATATCAAATAATCTCAAA 57.748 29.630 23.37 0.00 0.00 2.69
5448 5920 9.819267 TTGCATGCATATCAAATAATCTCAAAA 57.181 25.926 23.37 0.00 0.00 2.44
5449 5921 9.251792 TGCATGCATATCAAATAATCTCAAAAC 57.748 29.630 18.46 0.00 0.00 2.43
5450 5922 9.472361 GCATGCATATCAAATAATCTCAAAACT 57.528 29.630 14.21 0.00 0.00 2.66
5458 5930 8.862325 TCAAATAATCTCAAAACTCTAAGGCA 57.138 30.769 0.00 0.00 0.00 4.75
5459 5931 8.730680 TCAAATAATCTCAAAACTCTAAGGCAC 58.269 33.333 0.00 0.00 0.00 5.01
5460 5932 6.910536 ATAATCTCAAAACTCTAAGGCACG 57.089 37.500 0.00 0.00 0.00 5.34
5461 5933 3.746045 TCTCAAAACTCTAAGGCACGT 57.254 42.857 0.00 0.00 0.00 4.49
5462 5934 4.859304 TCTCAAAACTCTAAGGCACGTA 57.141 40.909 0.00 0.00 0.00 3.57
5463 5935 5.204409 TCTCAAAACTCTAAGGCACGTAA 57.796 39.130 0.00 0.00 0.00 3.18
5464 5936 5.790593 TCTCAAAACTCTAAGGCACGTAAT 58.209 37.500 0.00 0.00 0.00 1.89
5465 5937 5.637810 TCTCAAAACTCTAAGGCACGTAATG 59.362 40.000 0.00 0.00 0.00 1.90
5466 5938 5.302360 TCAAAACTCTAAGGCACGTAATGT 58.698 37.500 0.00 0.00 0.00 2.71
5467 5939 6.457355 TCAAAACTCTAAGGCACGTAATGTA 58.543 36.000 0.00 0.00 0.00 2.29
5468 5940 7.101054 TCAAAACTCTAAGGCACGTAATGTAT 58.899 34.615 0.00 0.00 0.00 2.29
5469 5941 7.604927 TCAAAACTCTAAGGCACGTAATGTATT 59.395 33.333 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.701107 TGCATGCAACCATTTCATTGG 58.299 42.857 20.30 0.00 42.82 3.16
13 14 4.271590 CATGCATGCAACCATTTCATTG 57.728 40.909 26.68 10.40 0.00 2.82
27 28 1.717194 GTTGGAAAGGTGCATGCATG 58.283 50.000 25.64 22.70 0.00 4.06
28 29 0.244450 CGTTGGAAAGGTGCATGCAT 59.756 50.000 25.64 7.59 0.00 3.96
29 30 1.659233 CGTTGGAAAGGTGCATGCA 59.341 52.632 18.46 18.46 0.00 3.96
30 31 1.734117 GCGTTGGAAAGGTGCATGC 60.734 57.895 11.82 11.82 33.49 4.06
31 32 1.080569 GGCGTTGGAAAGGTGCATG 60.081 57.895 0.00 0.00 33.49 4.06
32 33 2.625823 CGGCGTTGGAAAGGTGCAT 61.626 57.895 0.00 0.00 33.49 3.96
33 34 3.283684 CGGCGTTGGAAAGGTGCA 61.284 61.111 0.00 0.00 33.49 4.57
34 35 4.038080 CCGGCGTTGGAAAGGTGC 62.038 66.667 6.01 0.00 33.49 5.01
35 36 3.361977 CCCGGCGTTGGAAAGGTG 61.362 66.667 6.01 0.00 33.49 4.00
38 39 4.955065 TATAAGGCCCGGCGTTGGAAAG 62.955 54.545 24.42 0.00 37.24 2.62
39 40 2.487274 ATAAGGCCCGGCGTTGGAAA 62.487 55.000 24.42 7.47 37.24 3.13
40 41 1.624479 TATAAGGCCCGGCGTTGGAA 61.624 55.000 24.42 7.81 37.24 3.53
41 42 1.624479 TTATAAGGCCCGGCGTTGGA 61.624 55.000 24.42 11.13 37.24 3.53
42 43 0.748729 TTTATAAGGCCCGGCGTTGG 60.749 55.000 24.42 1.16 37.24 3.77
43 44 1.064952 CTTTTATAAGGCCCGGCGTTG 59.935 52.381 24.42 5.55 37.24 4.10
44 45 1.385528 CTTTTATAAGGCCCGGCGTT 58.614 50.000 20.52 20.52 39.89 4.84
45 46 0.464916 CCTTTTATAAGGCCCGGCGT 60.465 55.000 6.01 0.00 44.27 5.68
46 47 2.327228 CCTTTTATAAGGCCCGGCG 58.673 57.895 0.00 0.00 44.27 6.46
52 53 6.620893 ACAAGCATGTCCCCTTTTATAAGGC 61.621 44.000 6.45 0.00 41.99 4.35
53 54 4.956075 ACAAGCATGTCCCCTTTTATAAGG 59.044 41.667 5.04 5.04 42.55 2.69
54 55 5.652014 TCACAAGCATGTCCCCTTTTATAAG 59.348 40.000 0.00 0.00 37.82 1.73
55 56 5.575157 TCACAAGCATGTCCCCTTTTATAA 58.425 37.500 0.00 0.00 37.82 0.98
56 57 5.186256 TCACAAGCATGTCCCCTTTTATA 57.814 39.130 0.00 0.00 37.82 0.98
57 58 4.046286 TCACAAGCATGTCCCCTTTTAT 57.954 40.909 0.00 0.00 37.82 1.40
58 59 3.517296 TCACAAGCATGTCCCCTTTTA 57.483 42.857 0.00 0.00 37.82 1.52
59 60 2.380064 TCACAAGCATGTCCCCTTTT 57.620 45.000 0.00 0.00 37.82 2.27
60 61 2.173519 CATCACAAGCATGTCCCCTTT 58.826 47.619 0.00 0.00 37.82 3.11
61 62 1.843368 CATCACAAGCATGTCCCCTT 58.157 50.000 0.00 0.00 37.82 3.95
62 63 0.682209 GCATCACAAGCATGTCCCCT 60.682 55.000 0.00 0.00 37.82 4.79
63 64 0.682209 AGCATCACAAGCATGTCCCC 60.682 55.000 0.00 0.00 37.82 4.81
64 65 0.454600 CAGCATCACAAGCATGTCCC 59.545 55.000 0.00 0.00 37.82 4.46
65 66 1.400846 CTCAGCATCACAAGCATGTCC 59.599 52.381 0.00 0.00 37.82 4.02
66 67 2.352034 CTCTCAGCATCACAAGCATGTC 59.648 50.000 0.00 0.00 37.82 3.06
67 68 2.357075 CTCTCAGCATCACAAGCATGT 58.643 47.619 0.00 0.00 41.61 3.21
68 69 1.671328 CCTCTCAGCATCACAAGCATG 59.329 52.381 0.00 0.00 0.00 4.06
69 70 2.017623 GCCTCTCAGCATCACAAGCAT 61.018 52.381 0.00 0.00 0.00 3.79
70 71 0.675837 GCCTCTCAGCATCACAAGCA 60.676 55.000 0.00 0.00 0.00 3.91
71 72 1.375098 GGCCTCTCAGCATCACAAGC 61.375 60.000 0.00 0.00 0.00 4.01
72 73 0.252479 AGGCCTCTCAGCATCACAAG 59.748 55.000 0.00 0.00 0.00 3.16
73 74 1.571955 TAGGCCTCTCAGCATCACAA 58.428 50.000 9.68 0.00 0.00 3.33
74 75 1.571955 TTAGGCCTCTCAGCATCACA 58.428 50.000 9.68 0.00 0.00 3.58
75 76 2.926778 ATTAGGCCTCTCAGCATCAC 57.073 50.000 9.68 0.00 0.00 3.06
76 77 4.444876 GGTTTATTAGGCCTCTCAGCATCA 60.445 45.833 9.68 0.00 0.00 3.07
77 78 4.068599 GGTTTATTAGGCCTCTCAGCATC 58.931 47.826 9.68 0.00 0.00 3.91
78 79 3.181439 GGGTTTATTAGGCCTCTCAGCAT 60.181 47.826 9.68 0.00 0.00 3.79
79 80 2.172717 GGGTTTATTAGGCCTCTCAGCA 59.827 50.000 9.68 0.00 0.00 4.41
80 81 2.807108 CGGGTTTATTAGGCCTCTCAGC 60.807 54.545 9.68 0.00 0.00 4.26
81 82 2.224305 CCGGGTTTATTAGGCCTCTCAG 60.224 54.545 9.68 0.00 0.00 3.35
82 83 1.766496 CCGGGTTTATTAGGCCTCTCA 59.234 52.381 9.68 0.00 0.00 3.27
83 84 2.044758 TCCGGGTTTATTAGGCCTCTC 58.955 52.381 9.68 0.00 0.00 3.20
84 85 1.767088 GTCCGGGTTTATTAGGCCTCT 59.233 52.381 9.68 0.00 0.00 3.69
85 86 1.539712 CGTCCGGGTTTATTAGGCCTC 60.540 57.143 9.68 0.00 0.00 4.70
86 87 0.466963 CGTCCGGGTTTATTAGGCCT 59.533 55.000 11.78 11.78 0.00 5.19
87 88 0.533531 CCGTCCGGGTTTATTAGGCC 60.534 60.000 0.00 0.00 0.00 5.19
88 89 0.465287 TCCGTCCGGGTTTATTAGGC 59.535 55.000 0.00 0.00 37.00 3.93
89 90 1.069668 CCTCCGTCCGGGTTTATTAGG 59.930 57.143 0.00 0.00 37.00 2.69
90 91 1.069668 CCCTCCGTCCGGGTTTATTAG 59.930 57.143 0.00 0.00 36.91 1.73
91 92 1.122227 CCCTCCGTCCGGGTTTATTA 58.878 55.000 0.00 0.00 36.91 0.98
92 93 0.618393 TCCCTCCGTCCGGGTTTATT 60.618 55.000 0.00 0.00 42.56 1.40
93 94 1.002017 TCCCTCCGTCCGGGTTTAT 59.998 57.895 0.00 0.00 42.56 1.40
94 95 1.683365 CTCCCTCCGTCCGGGTTTA 60.683 63.158 0.00 0.00 42.56 2.01
95 96 2.445492 TACTCCCTCCGTCCGGGTTT 62.445 60.000 0.00 0.00 42.56 3.27
96 97 2.234246 ATACTCCCTCCGTCCGGGTT 62.234 60.000 0.00 0.00 42.56 4.11
97 98 2.698075 ATACTCCCTCCGTCCGGGT 61.698 63.158 0.00 0.00 42.56 5.28
98 99 2.197875 ATACTCCCTCCGTCCGGG 59.802 66.667 0.00 0.00 43.38 5.73
99 100 2.857744 GCATACTCCCTCCGTCCGG 61.858 68.421 0.00 0.00 0.00 5.14
100 101 0.536687 TAGCATACTCCCTCCGTCCG 60.537 60.000 0.00 0.00 0.00 4.79
101 102 0.960286 GTAGCATACTCCCTCCGTCC 59.040 60.000 0.00 0.00 38.91 4.79
112 113 4.944962 TGCATGACACAAAGTAGCATAC 57.055 40.909 0.00 0.00 43.47 2.39
113 114 5.184711 TCATGCATGACACAAAGTAGCATA 58.815 37.500 25.42 0.00 39.67 3.14
114 115 4.011698 TCATGCATGACACAAAGTAGCAT 58.988 39.130 25.42 0.00 41.24 3.79
115 116 3.410508 TCATGCATGACACAAAGTAGCA 58.589 40.909 25.42 0.00 37.13 3.49
177 178 9.368416 AGTGAATAATAGTACCTCTCTAATGCA 57.632 33.333 0.00 0.00 0.00 3.96
212 213 9.145442 AGAGTATCATATGCTAGTATCATGCAT 57.855 33.333 0.00 0.00 43.42 3.96
213 214 8.530804 AGAGTATCATATGCTAGTATCATGCA 57.469 34.615 0.00 0.00 38.30 3.96
214 215 8.081633 GGAGAGTATCATATGCTAGTATCATGC 58.918 40.741 14.69 0.00 37.82 4.06
215 216 9.129532 TGGAGAGTATCATATGCTAGTATCATG 57.870 37.037 14.69 1.00 37.82 3.07
216 217 9.880254 ATGGAGAGTATCATATGCTAGTATCAT 57.120 33.333 14.69 7.57 37.82 2.45
217 218 9.706529 AATGGAGAGTATCATATGCTAGTATCA 57.293 33.333 14.69 6.08 37.82 2.15
220 221 9.975218 TGTAATGGAGAGTATCATATGCTAGTA 57.025 33.333 0.00 0.00 37.82 1.82
221 222 8.885693 TGTAATGGAGAGTATCATATGCTAGT 57.114 34.615 0.00 0.00 37.82 2.57
222 223 9.579768 GTTGTAATGGAGAGTATCATATGCTAG 57.420 37.037 0.00 0.00 37.82 3.42
223 224 8.531982 GGTTGTAATGGAGAGTATCATATGCTA 58.468 37.037 0.00 0.00 37.82 3.49
224 225 7.016563 TGGTTGTAATGGAGAGTATCATATGCT 59.983 37.037 0.00 0.00 37.82 3.79
225 226 7.161404 TGGTTGTAATGGAGAGTATCATATGC 58.839 38.462 0.00 0.00 37.82 3.14
226 227 7.821359 CCTGGTTGTAATGGAGAGTATCATATG 59.179 40.741 0.00 0.00 37.82 1.78
227 228 7.527868 GCCTGGTTGTAATGGAGAGTATCATAT 60.528 40.741 0.00 0.00 37.82 1.78
228 229 6.239600 GCCTGGTTGTAATGGAGAGTATCATA 60.240 42.308 0.00 0.00 37.82 2.15
229 230 5.455326 GCCTGGTTGTAATGGAGAGTATCAT 60.455 44.000 0.00 0.00 37.82 2.45
230 231 4.141711 GCCTGGTTGTAATGGAGAGTATCA 60.142 45.833 0.00 0.00 37.82 2.15
231 232 4.101741 AGCCTGGTTGTAATGGAGAGTATC 59.898 45.833 0.00 0.00 0.00 2.24
232 233 4.040755 AGCCTGGTTGTAATGGAGAGTAT 58.959 43.478 0.00 0.00 0.00 2.12
233 234 3.197766 CAGCCTGGTTGTAATGGAGAGTA 59.802 47.826 1.90 0.00 0.00 2.59
234 235 2.026822 CAGCCTGGTTGTAATGGAGAGT 60.027 50.000 1.90 0.00 0.00 3.24
235 236 2.237143 TCAGCCTGGTTGTAATGGAGAG 59.763 50.000 10.46 0.00 0.00 3.20
236 237 2.027192 GTCAGCCTGGTTGTAATGGAGA 60.027 50.000 10.46 0.00 0.00 3.71
237 238 2.359900 GTCAGCCTGGTTGTAATGGAG 58.640 52.381 10.46 0.00 0.00 3.86
238 239 1.004277 GGTCAGCCTGGTTGTAATGGA 59.996 52.381 10.46 0.00 0.00 3.41
239 240 1.463674 GGTCAGCCTGGTTGTAATGG 58.536 55.000 10.46 0.00 0.00 3.16
240 241 1.086696 CGGTCAGCCTGGTTGTAATG 58.913 55.000 10.46 0.00 0.00 1.90
241 242 0.981183 TCGGTCAGCCTGGTTGTAAT 59.019 50.000 10.46 0.00 0.00 1.89
242 243 0.759959 TTCGGTCAGCCTGGTTGTAA 59.240 50.000 10.46 0.00 0.00 2.41
243 244 0.759959 TTTCGGTCAGCCTGGTTGTA 59.240 50.000 10.46 0.00 0.00 2.41
244 245 0.110486 ATTTCGGTCAGCCTGGTTGT 59.890 50.000 10.46 0.00 0.00 3.32
245 246 2.107950 TATTTCGGTCAGCCTGGTTG 57.892 50.000 3.88 3.88 0.00 3.77
246 247 2.871096 TTATTTCGGTCAGCCTGGTT 57.129 45.000 0.00 0.00 0.00 3.67
247 248 3.366052 AATTATTTCGGTCAGCCTGGT 57.634 42.857 0.00 0.00 0.00 4.00
248 249 4.718940 AAAATTATTTCGGTCAGCCTGG 57.281 40.909 0.00 0.00 0.00 4.45
249 250 6.616947 TGTAAAAATTATTTCGGTCAGCCTG 58.383 36.000 0.00 0.00 0.00 4.85
250 251 6.127730 CCTGTAAAAATTATTTCGGTCAGCCT 60.128 38.462 0.00 0.00 0.00 4.58
251 252 6.033966 CCTGTAAAAATTATTTCGGTCAGCC 58.966 40.000 0.00 0.00 0.00 4.85
252 253 6.848451 TCCTGTAAAAATTATTTCGGTCAGC 58.152 36.000 0.00 0.00 0.00 4.26
253 254 8.673711 TGATCCTGTAAAAATTATTTCGGTCAG 58.326 33.333 0.00 0.00 0.00 3.51
254 255 8.568676 TGATCCTGTAAAAATTATTTCGGTCA 57.431 30.769 0.00 0.00 0.00 4.02
255 256 8.674607 ACTGATCCTGTAAAAATTATTTCGGTC 58.325 33.333 0.00 0.00 0.00 4.79
256 257 8.575649 ACTGATCCTGTAAAAATTATTTCGGT 57.424 30.769 0.00 0.00 0.00 4.69
257 258 9.855021 AAACTGATCCTGTAAAAATTATTTCGG 57.145 29.630 0.00 0.00 0.00 4.30
273 274 0.179073 CATCGGGCGAAACTGATCCT 60.179 55.000 0.00 0.00 34.30 3.24
279 280 2.746277 GTGGCATCGGGCGAAACT 60.746 61.111 0.00 0.00 46.16 2.66
288 289 0.392327 TGTGGTACCATGTGGCATCG 60.392 55.000 19.72 0.00 39.32 3.84
297 298 5.660864 CCCTAAAATGGATTTGTGGTACCAT 59.339 40.000 19.72 0.53 43.74 3.55
298 299 5.020132 CCCTAAAATGGATTTGTGGTACCA 58.980 41.667 11.60 11.60 36.83 3.25
372 376 5.521735 AGCTCGATATTGCAACTTTAGACAG 59.478 40.000 0.00 0.00 0.00 3.51
376 380 8.175069 TGTAAAAGCTCGATATTGCAACTTTAG 58.825 33.333 0.00 0.00 0.00 1.85
453 460 4.043073 GCCACTGCTTAGATACTACGTTC 58.957 47.826 0.00 0.00 33.53 3.95
454 461 3.446161 TGCCACTGCTTAGATACTACGTT 59.554 43.478 0.00 0.00 38.71 3.99
456 463 3.633235 CTGCCACTGCTTAGATACTACG 58.367 50.000 0.00 0.00 38.71 3.51
457 464 3.181475 TGCTGCCACTGCTTAGATACTAC 60.181 47.826 0.00 0.00 38.71 2.73
458 465 3.031013 TGCTGCCACTGCTTAGATACTA 58.969 45.455 0.00 0.00 38.71 1.82
460 467 2.208431 CTGCTGCCACTGCTTAGATAC 58.792 52.381 0.00 0.00 38.71 2.24
503 512 4.449405 GGAGTTTGTTAGAGCTCTTGTGTC 59.551 45.833 23.84 9.65 0.00 3.67
504 513 4.381411 GGAGTTTGTTAGAGCTCTTGTGT 58.619 43.478 23.84 0.00 0.00 3.72
515 524 3.877508 GGATGATTCCGGGAGTTTGTTAG 59.122 47.826 0.00 0.00 30.72 2.34
526 535 0.250901 GGGGACATGGATGATTCCGG 60.251 60.000 0.00 0.00 45.89 5.14
797 815 2.858974 ACTGGGTTGGGTGGAGGG 60.859 66.667 0.00 0.00 0.00 4.30
800 818 2.039298 TGGACTGGGTTGGGTGGA 60.039 61.111 0.00 0.00 0.00 4.02
803 821 3.133365 GCTGTGGACTGGGTTGGGT 62.133 63.158 0.00 0.00 0.00 4.51
804 822 1.488705 TAGCTGTGGACTGGGTTGGG 61.489 60.000 0.00 0.00 0.00 4.12
805 823 0.400213 TTAGCTGTGGACTGGGTTGG 59.600 55.000 0.00 0.00 0.00 3.77
850 868 0.837272 CGGTCCCTCTCTCTCTCTCT 59.163 60.000 0.00 0.00 0.00 3.10
851 869 0.818040 GCGGTCCCTCTCTCTCTCTC 60.818 65.000 0.00 0.00 0.00 3.20
852 870 1.226262 GCGGTCCCTCTCTCTCTCT 59.774 63.158 0.00 0.00 0.00 3.10
921 939 9.618890 TCTAGAACATTCTTGGGATTAATTCTG 57.381 33.333 0.00 0.00 38.70 3.02
1092 1110 1.329256 CGCCAGCACTAGGGTAGTAT 58.671 55.000 0.00 0.00 37.23 2.12
1141 1159 1.381872 AGTAGAGCTGGTGCGGGAT 60.382 57.895 0.00 0.00 45.42 3.85
1203 1227 2.203669 GGCATGGGCATGGGCATA 60.204 61.111 0.00 0.00 43.71 3.14
1431 1467 1.541233 CGGAGGTCAAAGAAGTGCACT 60.541 52.381 15.25 15.25 0.00 4.40
1772 1821 2.501610 GGTCGGGCATGAGAGGAC 59.498 66.667 0.00 0.00 0.00 3.85
1779 1828 2.671619 AAACACCGGTCGGGCATG 60.672 61.111 2.59 5.72 40.62 4.06
1789 1838 0.248866 GGACCTGCAAACAAACACCG 60.249 55.000 0.00 0.00 0.00 4.94
2033 2084 2.935849 CCTGCGTGCAATTCACATAGTA 59.064 45.455 0.00 0.00 45.92 1.82
2034 2085 1.739466 CCTGCGTGCAATTCACATAGT 59.261 47.619 0.00 0.00 45.92 2.12
2035 2086 1.532505 GCCTGCGTGCAATTCACATAG 60.533 52.381 0.00 5.69 45.92 2.23
2174 2225 0.546747 TGGTAACCACCTCTCCCCTG 60.547 60.000 0.00 0.00 45.98 4.45
2252 2303 2.434331 CCCTTGCCCTTCCGTTCA 59.566 61.111 0.00 0.00 0.00 3.18
2475 2526 4.980805 GGTGGCGTTGCTGTCGGA 62.981 66.667 0.00 0.00 0.00 4.55
2520 2592 3.450115 GGTGGTCCTCGTCTCCGG 61.450 72.222 0.00 0.00 33.95 5.14
2639 2721 5.335897 GCAAATCCTTCTCACAATTGTAGCA 60.336 40.000 11.53 0.00 0.00 3.49
2640 2722 5.098211 GCAAATCCTTCTCACAATTGTAGC 58.902 41.667 11.53 0.00 0.00 3.58
2641 2723 5.416952 AGGCAAATCCTTCTCACAATTGTAG 59.583 40.000 11.53 9.37 44.75 2.74
2642 2724 5.324409 AGGCAAATCCTTCTCACAATTGTA 58.676 37.500 11.53 0.00 44.75 2.41
2643 2725 4.154942 AGGCAAATCCTTCTCACAATTGT 58.845 39.130 4.92 4.92 44.75 2.71
2644 2726 4.796038 AGGCAAATCCTTCTCACAATTG 57.204 40.909 3.24 3.24 44.75 2.32
2652 2734 3.818180 CATGAGCTAGGCAAATCCTTCT 58.182 45.455 0.00 0.00 44.75 2.85
2671 2753 3.058160 GCACACAAGGCCGAGCAT 61.058 61.111 0.00 0.00 0.00 3.79
2696 2778 2.802247 CTGCAACGAACAAGAGATCACA 59.198 45.455 0.00 0.00 0.00 3.58
2769 2851 2.657484 CTTCGCCGGCGTCGATCTTA 62.657 60.000 44.16 23.32 40.74 2.10
2852 2934 3.565764 ATGCAGCAGCTTATAGTTGGA 57.434 42.857 0.00 0.00 42.74 3.53
2874 2956 5.936686 ATGAGCTCCATGAAATATGAACG 57.063 39.130 12.15 0.00 33.39 3.95
2875 2957 6.294397 GGGAATGAGCTCCATGAAATATGAAC 60.294 42.308 12.15 0.00 37.20 3.18
2876 2958 5.771666 GGGAATGAGCTCCATGAAATATGAA 59.228 40.000 12.15 0.00 37.20 2.57
2877 2959 5.163066 TGGGAATGAGCTCCATGAAATATGA 60.163 40.000 12.15 0.00 37.20 2.15
2893 2979 1.140052 AGTGTGTGTTCGTGGGAATGA 59.860 47.619 0.00 0.00 34.05 2.57
2896 2982 0.537653 TGAGTGTGTGTTCGTGGGAA 59.462 50.000 0.00 0.00 0.00 3.97
2937 3023 9.480053 CAATTGAACCAACTTCTCATACAATTT 57.520 29.630 0.00 0.00 34.65 1.82
2938 3024 8.859090 TCAATTGAACCAACTTCTCATACAATT 58.141 29.630 5.45 0.00 36.38 2.32
2939 3025 8.408043 TCAATTGAACCAACTTCTCATACAAT 57.592 30.769 5.45 0.00 0.00 2.71
2952 3041 7.925483 CACATTTTTCTACCTCAATTGAACCAA 59.075 33.333 9.88 0.00 0.00 3.67
2954 3043 7.657336 TCACATTTTTCTACCTCAATTGAACC 58.343 34.615 9.88 0.00 0.00 3.62
2979 3169 9.705290 CTACCAATTTTGTAATTTTGTAGCCTT 57.295 29.630 0.00 0.00 33.85 4.35
3459 3657 5.461737 ACCACAAAATACATGAACGCTTTTG 59.538 36.000 0.00 9.86 40.73 2.44
3534 3732 0.459489 GGCAGCCAAACAAGACACAA 59.541 50.000 6.55 0.00 0.00 3.33
3535 3733 0.682532 TGGCAGCCAAACAAGACACA 60.683 50.000 13.33 0.00 0.00 3.72
3797 4015 2.296073 ATACCACTTCCCCGCAAAAA 57.704 45.000 0.00 0.00 0.00 1.94
3798 4016 2.296073 AATACCACTTCCCCGCAAAA 57.704 45.000 0.00 0.00 0.00 2.44
3799 4017 3.655615 ATAATACCACTTCCCCGCAAA 57.344 42.857 0.00 0.00 0.00 3.68
3800 4018 4.595781 AGATATAATACCACTTCCCCGCAA 59.404 41.667 0.00 0.00 0.00 4.85
3801 4019 4.164981 AGATATAATACCACTTCCCCGCA 58.835 43.478 0.00 0.00 0.00 5.69
3802 4020 4.820894 AGATATAATACCACTTCCCCGC 57.179 45.455 0.00 0.00 0.00 6.13
3803 4021 6.354794 TGAAGATATAATACCACTTCCCCG 57.645 41.667 0.00 0.00 36.96 5.73
3804 4022 9.014297 CATTTGAAGATATAATACCACTTCCCC 57.986 37.037 0.00 0.00 36.96 4.81
3805 4023 9.793259 TCATTTGAAGATATAATACCACTTCCC 57.207 33.333 0.00 0.00 36.96 3.97
3809 4027 9.832445 ACGTTCATTTGAAGATATAATACCACT 57.168 29.630 0.00 0.00 34.27 4.00
3991 4209 2.126734 GTACGTACCTGCACGCGT 60.127 61.111 15.00 5.58 45.77 6.01
4048 4266 0.548926 TGTGGGTGGCATAGGAGGAA 60.549 55.000 0.00 0.00 0.00 3.36
4050 4268 1.528824 CTGTGGGTGGCATAGGAGG 59.471 63.158 0.00 0.00 0.00 4.30
4052 4270 1.913951 CTGCTGTGGGTGGCATAGGA 61.914 60.000 0.00 0.00 37.83 2.94
4063 4281 0.523546 CGAGCTACGTACTGCTGTGG 60.524 60.000 13.47 0.96 39.91 4.17
4064 4282 1.134530 GCGAGCTACGTACTGCTGTG 61.135 60.000 13.47 7.46 44.60 3.66
4065 4283 1.136984 GCGAGCTACGTACTGCTGT 59.863 57.895 13.47 0.66 44.60 4.40
4066 4284 1.586564 GGCGAGCTACGTACTGCTG 60.587 63.158 13.47 7.66 44.60 4.41
4067 4285 2.799371 GGCGAGCTACGTACTGCT 59.201 61.111 8.91 8.91 44.60 4.24
4068 4286 2.651232 CGGCGAGCTACGTACTGC 60.651 66.667 0.00 0.00 44.60 4.40
4069 4287 1.582937 CACGGCGAGCTACGTACTG 60.583 63.158 16.62 0.00 42.04 2.74
4070 4288 1.580845 AACACGGCGAGCTACGTACT 61.581 55.000 16.62 0.00 42.04 2.73
4071 4289 0.096976 TAACACGGCGAGCTACGTAC 59.903 55.000 16.62 2.50 42.04 3.67
4184 4404 2.586357 GGCGGCGAGAAGATCACC 60.586 66.667 12.98 0.00 0.00 4.02
4358 4578 2.358247 GCGTGGGTGGACATCGTT 60.358 61.111 0.00 0.00 0.00 3.85
4704 4931 1.069227 TGACGACGGCGATGATGATAG 60.069 52.381 22.49 0.00 41.64 2.08
4705 4932 0.948678 TGACGACGGCGATGATGATA 59.051 50.000 22.49 0.00 41.64 2.15
4823 5051 7.270757 TGAAGAAGAATAGTCTAGCTAGCTG 57.729 40.000 27.68 16.48 32.16 4.24
4824 5052 7.523709 GCATGAAGAAGAATAGTCTAGCTAGCT 60.524 40.741 23.12 23.12 32.16 3.32
4825 5053 6.586082 GCATGAAGAAGAATAGTCTAGCTAGC 59.414 42.308 16.35 6.62 32.16 3.42
4826 5054 7.039784 AGGCATGAAGAAGAATAGTCTAGCTAG 60.040 40.741 15.01 15.01 32.16 3.42
4827 5055 6.780031 AGGCATGAAGAAGAATAGTCTAGCTA 59.220 38.462 0.00 0.00 32.16 3.32
4828 5056 5.602145 AGGCATGAAGAAGAATAGTCTAGCT 59.398 40.000 0.00 0.00 32.16 3.32
4904 5132 9.850198 TCAAATCTATCATTACCATCACATGAA 57.150 29.630 0.00 0.00 30.79 2.57
4925 5153 6.555738 AGAGAGATGGTGAGATCTGATCAAAT 59.444 38.462 19.12 5.56 32.57 2.32
4969 5223 9.757227 CCAAGTAAACAAAATGGAAAACATAGA 57.243 29.630 0.00 0.00 39.40 1.98
4972 5226 6.262049 GGCCAAGTAAACAAAATGGAAAACAT 59.738 34.615 0.00 0.00 43.07 2.71
4973 5227 5.586643 GGCCAAGTAAACAAAATGGAAAACA 59.413 36.000 0.00 0.00 32.82 2.83
4974 5228 5.008217 GGGCCAAGTAAACAAAATGGAAAAC 59.992 40.000 4.39 0.00 32.82 2.43
4975 5229 5.104318 AGGGCCAAGTAAACAAAATGGAAAA 60.104 36.000 6.18 0.00 32.82 2.29
5000 5254 7.243604 TCTTAAGGGAACATGAATGCAAATT 57.756 32.000 0.00 0.00 0.00 1.82
5020 5274 7.090953 ACGAAATGGGCGAATAAAAATCTTA 57.909 32.000 0.00 0.00 0.00 2.10
5021 5275 5.961272 ACGAAATGGGCGAATAAAAATCTT 58.039 33.333 0.00 0.00 0.00 2.40
5022 5276 5.576447 ACGAAATGGGCGAATAAAAATCT 57.424 34.783 0.00 0.00 0.00 2.40
5023 5277 6.492254 ACTACGAAATGGGCGAATAAAAATC 58.508 36.000 0.00 0.00 0.00 2.17
5024 5278 6.445357 ACTACGAAATGGGCGAATAAAAAT 57.555 33.333 0.00 0.00 0.00 1.82
5025 5279 5.883503 ACTACGAAATGGGCGAATAAAAA 57.116 34.783 0.00 0.00 0.00 1.94
5026 5280 6.762187 TCATACTACGAAATGGGCGAATAAAA 59.238 34.615 0.00 0.00 0.00 1.52
5027 5281 6.282167 TCATACTACGAAATGGGCGAATAAA 58.718 36.000 0.00 0.00 0.00 1.40
5028 5282 5.845103 TCATACTACGAAATGGGCGAATAA 58.155 37.500 0.00 0.00 0.00 1.40
5029 5283 5.456548 TCATACTACGAAATGGGCGAATA 57.543 39.130 0.00 0.00 0.00 1.75
5030 5284 4.330944 TCATACTACGAAATGGGCGAAT 57.669 40.909 0.00 0.00 0.00 3.34
5031 5285 3.804786 TCATACTACGAAATGGGCGAA 57.195 42.857 0.00 0.00 0.00 4.70
5049 5303 6.003326 ACATCACCCGCATGATATATTTTCA 58.997 36.000 0.00 0.00 37.20 2.69
5050 5304 6.500684 ACATCACCCGCATGATATATTTTC 57.499 37.500 0.00 0.00 37.20 2.29
5051 5305 6.899393 AACATCACCCGCATGATATATTTT 57.101 33.333 0.00 0.00 37.20 1.82
5052 5306 6.489700 TGAAACATCACCCGCATGATATATTT 59.510 34.615 0.00 2.56 37.20 1.40
5053 5307 6.003326 TGAAACATCACCCGCATGATATATT 58.997 36.000 0.00 0.00 37.20 1.28
5054 5308 5.559770 TGAAACATCACCCGCATGATATAT 58.440 37.500 0.00 0.00 37.20 0.86
5055 5309 4.967036 TGAAACATCACCCGCATGATATA 58.033 39.130 0.00 0.00 37.20 0.86
5056 5310 3.819368 TGAAACATCACCCGCATGATAT 58.181 40.909 0.00 0.00 37.20 1.63
5057 5311 3.274095 TGAAACATCACCCGCATGATA 57.726 42.857 0.00 0.00 37.20 2.15
5058 5312 2.127271 TGAAACATCACCCGCATGAT 57.873 45.000 0.00 0.00 40.03 2.45
5069 5323 4.821805 TCCTTTGGTCTGACTTGAAACATC 59.178 41.667 7.85 0.00 0.00 3.06
5176 5433 3.975168 TTTAGGACCTACTGCTTGACC 57.025 47.619 0.00 0.00 0.00 4.02
5180 5437 6.668283 TGAGAGTATTTTAGGACCTACTGCTT 59.332 38.462 0.00 0.00 0.00 3.91
5231 5703 3.489047 CGTTTGCCCACATTAAACAACTG 59.511 43.478 0.00 0.00 34.78 3.16
5247 5719 0.100503 AACTCAGGTGTTGCGTTTGC 59.899 50.000 0.00 0.00 43.20 3.68
5248 5720 2.559998 AAACTCAGGTGTTGCGTTTG 57.440 45.000 0.00 0.00 41.72 2.93
5249 5721 3.630312 ACATAAACTCAGGTGTTGCGTTT 59.370 39.130 1.61 1.61 44.48 3.60
5250 5722 3.211045 ACATAAACTCAGGTGTTGCGTT 58.789 40.909 0.00 0.00 36.32 4.84
5251 5723 2.846193 ACATAAACTCAGGTGTTGCGT 58.154 42.857 0.00 0.00 0.00 5.24
5252 5724 3.498397 AGAACATAAACTCAGGTGTTGCG 59.502 43.478 0.00 0.00 35.15 4.85
5253 5725 6.554334 TTAGAACATAAACTCAGGTGTTGC 57.446 37.500 0.00 0.00 35.15 4.17
5315 5787 0.804989 GCATCAAAACGGAGGGACTG 59.195 55.000 0.00 0.00 41.55 3.51
5317 5789 1.463674 ATGCATCAAAACGGAGGGAC 58.536 50.000 0.00 0.00 0.00 4.46
5318 5790 2.214376 AATGCATCAAAACGGAGGGA 57.786 45.000 0.00 0.00 0.00 4.20
5319 5791 2.358898 CCTAATGCATCAAAACGGAGGG 59.641 50.000 0.00 0.00 0.00 4.30
5320 5792 2.223572 GCCTAATGCATCAAAACGGAGG 60.224 50.000 0.00 0.00 40.77 4.30
5321 5793 3.070429 GCCTAATGCATCAAAACGGAG 57.930 47.619 0.00 0.00 40.77 4.63
5333 5805 4.275936 ACCAATTCGTTAGATGCCTAATGC 59.724 41.667 0.00 0.00 40.19 3.56
5334 5806 5.527214 TCACCAATTCGTTAGATGCCTAATG 59.473 40.000 0.00 0.00 41.19 1.90
5335 5807 5.680619 TCACCAATTCGTTAGATGCCTAAT 58.319 37.500 0.00 0.00 37.23 1.73
5336 5808 5.092554 TCACCAATTCGTTAGATGCCTAA 57.907 39.130 0.00 0.00 32.76 2.69
5337 5809 4.746535 TCACCAATTCGTTAGATGCCTA 57.253 40.909 0.00 0.00 0.00 3.93
5338 5810 3.627395 TCACCAATTCGTTAGATGCCT 57.373 42.857 0.00 0.00 0.00 4.75
5339 5811 4.900635 ATTCACCAATTCGTTAGATGCC 57.099 40.909 0.00 0.00 0.00 4.40
5340 5812 6.430451 CCTAATTCACCAATTCGTTAGATGC 58.570 40.000 0.00 0.00 33.95 3.91
5341 5813 6.038161 TGCCTAATTCACCAATTCGTTAGATG 59.962 38.462 0.00 0.00 33.95 2.90
5342 5814 6.119536 TGCCTAATTCACCAATTCGTTAGAT 58.880 36.000 0.00 0.00 33.95 1.98
5343 5815 5.492895 TGCCTAATTCACCAATTCGTTAGA 58.507 37.500 0.00 0.00 33.95 2.10
5344 5816 5.811399 TGCCTAATTCACCAATTCGTTAG 57.189 39.130 0.00 0.00 33.95 2.34
5345 5817 6.119536 AGATGCCTAATTCACCAATTCGTTA 58.880 36.000 0.00 0.00 33.95 3.18
5346 5818 4.949856 AGATGCCTAATTCACCAATTCGTT 59.050 37.500 0.00 0.00 33.95 3.85
5347 5819 4.526970 AGATGCCTAATTCACCAATTCGT 58.473 39.130 0.00 0.00 33.95 3.85
5348 5820 6.618287 TTAGATGCCTAATTCACCAATTCG 57.382 37.500 0.00 0.00 33.95 3.34
5349 5821 8.169977 TCATTAGATGCCTAATTCACCAATTC 57.830 34.615 0.00 0.00 42.15 2.17
5350 5822 8.537728 TTCATTAGATGCCTAATTCACCAATT 57.462 30.769 0.00 0.00 42.15 2.32
5351 5823 8.537728 TTTCATTAGATGCCTAATTCACCAAT 57.462 30.769 0.00 0.00 42.15 3.16
5352 5824 7.953005 TTTCATTAGATGCCTAATTCACCAA 57.047 32.000 0.00 0.00 42.15 3.67
5353 5825 7.953005 TTTTCATTAGATGCCTAATTCACCA 57.047 32.000 0.00 0.00 42.15 4.17
5354 5826 9.468532 GATTTTTCATTAGATGCCTAATTCACC 57.531 33.333 0.00 0.00 42.15 4.02
5372 5844 9.474920 AGCGTTTTGAGATTATTTGATTTTTCA 57.525 25.926 0.00 0.00 0.00 2.69
5376 5848 9.573133 CCTTAGCGTTTTGAGATTATTTGATTT 57.427 29.630 0.00 0.00 0.00 2.17
5377 5849 7.702348 GCCTTAGCGTTTTGAGATTATTTGATT 59.298 33.333 0.00 0.00 0.00 2.57
5378 5850 7.148086 TGCCTTAGCGTTTTGAGATTATTTGAT 60.148 33.333 0.00 0.00 44.31 2.57
5379 5851 6.150307 TGCCTTAGCGTTTTGAGATTATTTGA 59.850 34.615 0.00 0.00 44.31 2.69
5380 5852 6.251376 GTGCCTTAGCGTTTTGAGATTATTTG 59.749 38.462 0.00 0.00 44.31 2.32
5381 5853 6.322491 GTGCCTTAGCGTTTTGAGATTATTT 58.678 36.000 0.00 0.00 44.31 1.40
5382 5854 5.447279 CGTGCCTTAGCGTTTTGAGATTATT 60.447 40.000 0.00 0.00 44.31 1.40
5383 5855 4.034048 CGTGCCTTAGCGTTTTGAGATTAT 59.966 41.667 0.00 0.00 44.31 1.28
5384 5856 3.369756 CGTGCCTTAGCGTTTTGAGATTA 59.630 43.478 0.00 0.00 44.31 1.75
5385 5857 2.159627 CGTGCCTTAGCGTTTTGAGATT 59.840 45.455 0.00 0.00 44.31 2.40
5386 5858 1.732259 CGTGCCTTAGCGTTTTGAGAT 59.268 47.619 0.00 0.00 44.31 2.75
5387 5859 1.144969 CGTGCCTTAGCGTTTTGAGA 58.855 50.000 0.00 0.00 44.31 3.27
5388 5860 0.865769 ACGTGCCTTAGCGTTTTGAG 59.134 50.000 0.00 0.00 44.31 3.02
5389 5861 2.151881 TACGTGCCTTAGCGTTTTGA 57.848 45.000 0.00 0.00 44.31 2.69
5390 5862 2.032722 TGTTACGTGCCTTAGCGTTTTG 60.033 45.455 0.00 0.00 44.31 2.44
5391 5863 2.211806 TGTTACGTGCCTTAGCGTTTT 58.788 42.857 0.00 0.00 44.31 2.43
5392 5864 1.868469 TGTTACGTGCCTTAGCGTTT 58.132 45.000 0.00 0.00 44.31 3.60
5393 5865 1.868469 TTGTTACGTGCCTTAGCGTT 58.132 45.000 0.00 0.00 44.31 4.84
5394 5866 2.088950 ATTGTTACGTGCCTTAGCGT 57.911 45.000 0.00 0.00 44.31 5.07
5395 5867 3.184541 ACTATTGTTACGTGCCTTAGCG 58.815 45.455 0.00 0.00 44.31 4.26
5396 5868 6.839820 AATACTATTGTTACGTGCCTTAGC 57.160 37.500 0.00 0.00 40.48 3.09
5397 5869 9.525409 AACTAATACTATTGTTACGTGCCTTAG 57.475 33.333 0.00 0.00 0.00 2.18
5398 5870 9.304731 CAACTAATACTATTGTTACGTGCCTTA 57.695 33.333 0.00 0.00 0.00 2.69
5399 5871 7.201582 GCAACTAATACTATTGTTACGTGCCTT 60.202 37.037 0.00 0.00 0.00 4.35
5400 5872 6.257193 GCAACTAATACTATTGTTACGTGCCT 59.743 38.462 0.00 0.00 0.00 4.75
5401 5873 6.036300 TGCAACTAATACTATTGTTACGTGCC 59.964 38.462 0.00 0.00 0.00 5.01
5402 5874 6.996106 TGCAACTAATACTATTGTTACGTGC 58.004 36.000 0.00 0.00 0.00 5.34
5403 5875 7.582679 GCATGCAACTAATACTATTGTTACGTG 59.417 37.037 14.21 0.00 0.00 4.49
5404 5876 7.279090 TGCATGCAACTAATACTATTGTTACGT 59.721 33.333 20.30 0.00 0.00 3.57
5405 5877 7.626446 TGCATGCAACTAATACTATTGTTACG 58.374 34.615 20.30 0.00 0.00 3.18
5409 5881 9.506018 TGATATGCATGCAACTAATACTATTGT 57.494 29.630 26.68 5.10 0.00 2.71
5419 5891 9.287373 TGAGATTATTTGATATGCATGCAACTA 57.713 29.630 26.68 14.26 0.00 2.24
5420 5892 8.173542 TGAGATTATTTGATATGCATGCAACT 57.826 30.769 26.68 15.01 0.00 3.16
5421 5893 8.806177 TTGAGATTATTTGATATGCATGCAAC 57.194 30.769 26.68 18.65 0.00 4.17
5422 5894 9.819267 TTTTGAGATTATTTGATATGCATGCAA 57.181 25.926 26.68 14.46 0.00 4.08
5423 5895 9.251792 GTTTTGAGATTATTTGATATGCATGCA 57.748 29.630 25.04 25.04 0.00 3.96
5424 5896 9.472361 AGTTTTGAGATTATTTGATATGCATGC 57.528 29.630 11.82 11.82 0.00 4.06
5432 5904 9.466497 TGCCTTAGAGTTTTGAGATTATTTGAT 57.534 29.630 0.00 0.00 0.00 2.57
5433 5905 8.730680 GTGCCTTAGAGTTTTGAGATTATTTGA 58.269 33.333 0.00 0.00 0.00 2.69
5434 5906 7.693951 CGTGCCTTAGAGTTTTGAGATTATTTG 59.306 37.037 0.00 0.00 0.00 2.32
5435 5907 7.390718 ACGTGCCTTAGAGTTTTGAGATTATTT 59.609 33.333 0.00 0.00 0.00 1.40
5436 5908 6.879458 ACGTGCCTTAGAGTTTTGAGATTATT 59.121 34.615 0.00 0.00 0.00 1.40
5437 5909 6.407202 ACGTGCCTTAGAGTTTTGAGATTAT 58.593 36.000 0.00 0.00 0.00 1.28
5438 5910 5.790593 ACGTGCCTTAGAGTTTTGAGATTA 58.209 37.500 0.00 0.00 0.00 1.75
5439 5911 4.642429 ACGTGCCTTAGAGTTTTGAGATT 58.358 39.130 0.00 0.00 0.00 2.40
5440 5912 4.273148 ACGTGCCTTAGAGTTTTGAGAT 57.727 40.909 0.00 0.00 0.00 2.75
5441 5913 3.746045 ACGTGCCTTAGAGTTTTGAGA 57.254 42.857 0.00 0.00 0.00 3.27
5442 5914 5.408604 ACATTACGTGCCTTAGAGTTTTGAG 59.591 40.000 0.00 0.00 0.00 3.02
5443 5915 5.302360 ACATTACGTGCCTTAGAGTTTTGA 58.698 37.500 0.00 0.00 0.00 2.69
5444 5916 5.607119 ACATTACGTGCCTTAGAGTTTTG 57.393 39.130 0.00 0.00 0.00 2.44
5445 5917 7.916914 AATACATTACGTGCCTTAGAGTTTT 57.083 32.000 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.