Multiple sequence alignment - TraesCS3A01G407400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G407400 chr3A 100.000 5223 0 0 1 5223 652030514 652025292 0.000000e+00 9646.0
1 TraesCS3A01G407400 chr3A 93.569 311 18 1 218 526 663274922 663274612 3.680000e-126 462.0
2 TraesCS3A01G407400 chr3D 94.060 2761 130 16 601 3342 516882849 516880104 0.000000e+00 4159.0
3 TraesCS3A01G407400 chr3D 93.197 1852 76 18 3399 5223 516880102 516878274 0.000000e+00 2676.0
4 TraesCS3A01G407400 chr3D 93.571 140 6 1 75 214 516884334 516884198 6.860000e-49 206.0
5 TraesCS3A01G407400 chr3D 89.535 86 8 1 2893 2978 165863598 165863514 1.990000e-19 108.0
6 TraesCS3A01G407400 chr3D 86.047 86 11 1 2893 2978 571120534 571120618 2.000000e-14 91.6
7 TraesCS3A01G407400 chr3B 94.753 1982 84 12 1740 3715 680422151 680424118 0.000000e+00 3066.0
8 TraesCS3A01G407400 chr3B 94.828 1508 61 10 3728 5223 680424164 680425666 0.000000e+00 2337.0
9 TraesCS3A01G407400 chr3B 92.884 1082 58 7 622 1686 680419728 680420807 0.000000e+00 1554.0
10 TraesCS3A01G407400 chr3B 94.212 311 17 1 220 530 606376050 606376359 1.700000e-129 473.0
11 TraesCS3A01G407400 chr7B 93.569 311 20 0 216 526 717329215 717328905 1.020000e-126 464.0
12 TraesCS3A01G407400 chr7B 90.625 64 4 2 28 90 413101075 413101137 3.350000e-12 84.2
13 TraesCS3A01G407400 chr7B 86.076 79 7 4 28 103 605909651 605909728 1.210000e-11 82.4
14 TraesCS3A01G407400 chr2B 93.811 307 19 0 219 525 24865915 24866221 3.680000e-126 462.0
15 TraesCS3A01G407400 chr2B 88.764 89 9 1 2889 2977 371164354 371164267 1.990000e-19 108.0
16 TraesCS3A01G407400 chr1A 94.079 304 18 0 222 525 520860758 520861061 3.680000e-126 462.0
17 TraesCS3A01G407400 chr1A 87.838 148 18 0 2660 2807 460332529 460332382 1.930000e-39 174.0
18 TraesCS3A01G407400 chr1A 100.000 31 0 0 2893 2923 558100824 558100794 2.030000e-04 58.4
19 TraesCS3A01G407400 chr6A 93.791 306 19 0 220 525 22627016 22626711 1.330000e-125 460.0
20 TraesCS3A01G407400 chr6A 93.485 307 20 0 219 525 57972822 57972516 1.710000e-124 457.0
21 TraesCS3A01G407400 chr6A 93.226 310 20 1 220 529 181910152 181909844 6.170000e-124 455.0
22 TraesCS3A01G407400 chr6A 91.463 328 23 4 216 543 485754927 485754605 3.710000e-121 446.0
23 TraesCS3A01G407400 chr6A 98.077 52 1 0 28 79 97593942 97593993 2.000000e-14 91.6
24 TraesCS3A01G407400 chr6A 88.462 78 6 3 2885 2962 221545435 221545361 2.000000e-14 91.6
25 TraesCS3A01G407400 chr1D 87.838 148 18 0 2660 2807 360479489 360479342 1.930000e-39 174.0
26 TraesCS3A01G407400 chr1D 82.796 93 8 4 2893 2978 315977770 315977861 5.610000e-10 76.8
27 TraesCS3A01G407400 chr2A 89.130 92 9 1 2886 2977 376082427 376082517 4.270000e-21 113.0
28 TraesCS3A01G407400 chr2A 88.235 85 9 1 2894 2978 1378702 1378619 3.330000e-17 100.0
29 TraesCS3A01G407400 chr7D 96.364 55 1 1 28 81 113581118 113581172 7.200000e-14 89.8
30 TraesCS3A01G407400 chr5D 98.000 50 1 0 28 77 513514613 513514662 2.590000e-13 87.9
31 TraesCS3A01G407400 chr5D 82.178 101 16 2 2893 2992 47332334 47332235 9.320000e-13 86.1
32 TraesCS3A01G407400 chr5D 88.406 69 6 2 28 95 379575670 379575603 1.210000e-11 82.4
33 TraesCS3A01G407400 chr2D 89.855 69 6 1 28 95 522707173 522707105 2.590000e-13 87.9
34 TraesCS3A01G407400 chr4B 91.935 62 2 2 30 88 617383549 617383610 3.350000e-12 84.2
35 TraesCS3A01G407400 chr4B 90.476 63 4 2 28 89 163901559 163901620 1.210000e-11 82.4
36 TraesCS3A01G407400 chr6B 84.337 83 12 1 2898 2979 4460425 4460343 4.340000e-11 80.5
37 TraesCS3A01G407400 chr5B 80.198 101 18 2 2893 2992 50469213 50469114 2.020000e-09 75.0
38 TraesCS3A01G407400 chr4D 100.000 31 0 0 2893 2923 494866663 494866693 2.030000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G407400 chr3A 652025292 652030514 5222 True 9646 9646 100.000000 1 5223 1 chr3A.!!$R1 5222
1 TraesCS3A01G407400 chr3D 516878274 516884334 6060 True 2347 4159 93.609333 75 5223 3 chr3D.!!$R2 5148
2 TraesCS3A01G407400 chr3B 680419728 680425666 5938 False 2319 3066 94.155000 622 5223 3 chr3B.!!$F2 4601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
372 373 0.037605 GTTCCCGTCGATGACAAGGT 60.038 55.0 6.11 0.00 32.09 3.50 F
373 374 0.037697 TTCCCGTCGATGACAAGGTG 60.038 55.0 6.11 0.00 32.09 4.00 F
444 445 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.0 0.00 0.00 0.00 3.53 F
498 499 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.0 13.26 0.00 46.56 4.01 F
508 509 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.0 13.26 0.00 0.00 2.73 F
510 511 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.0 2.64 0.00 0.00 3.41 F
2139 4705 0.447011 GATGTTCAGCTGCTGAGTGC 59.553 55.0 28.91 22.58 41.75 4.40 F
2140 4706 0.036448 ATGTTCAGCTGCTGAGTGCT 59.964 50.0 28.91 14.51 41.75 4.40 F
3249 5816 0.538584 TGGTGCTCTAGATGGTGCTG 59.461 55.0 0.00 0.00 0.00 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1296 2570 0.108186 TAATCAGGCACCAGCGTCTG 60.108 55.000 0.52 0.52 43.41 3.51 R
1389 2664 0.966179 TCAGCCTAAACTCTGACGCA 59.034 50.000 0.00 0.00 34.69 5.24 R
1835 4401 1.379843 CCACCAACCCCTGCCATAC 60.380 63.158 0.00 0.00 0.00 2.39 R
1968 4534 3.679389 CTGGGAAACAGCACTGAATACT 58.321 45.455 4.31 0.00 40.97 2.12 R
2137 4703 3.947196 ACAGACTTTCACAATTGTCAGCA 59.053 39.130 8.48 0.00 32.41 4.41 R
2140 4706 4.269183 ACCACAGACTTTCACAATTGTCA 58.731 39.130 8.48 0.00 32.41 3.58 R
3336 5903 0.397941 AGGCACTTCAGCAAGTAGCA 59.602 50.000 10.94 0.00 41.24 3.49 R
3646 6214 0.998928 TGTGTAGCCCCATGGACAAT 59.001 50.000 15.22 0.00 0.00 2.71 R
4764 7382 0.172803 CTTCTTGCTCAGCCATTGCC 59.827 55.000 0.00 0.00 38.69 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.646267 AGACTTTTATTCCGTATTACTGCCA 58.354 36.000 0.00 0.00 0.00 4.92
25 26 7.280356 AGACTTTTATTCCGTATTACTGCCAT 58.720 34.615 0.00 0.00 0.00 4.40
26 27 7.226720 AGACTTTTATTCCGTATTACTGCCATG 59.773 37.037 0.00 0.00 0.00 3.66
27 28 7.051623 ACTTTTATTCCGTATTACTGCCATGA 58.948 34.615 0.00 0.00 0.00 3.07
28 29 6.854496 TTTATTCCGTATTACTGCCATGAC 57.146 37.500 0.00 0.00 0.00 3.06
29 30 4.689612 ATTCCGTATTACTGCCATGACT 57.310 40.909 0.00 0.00 0.00 3.41
30 31 5.801531 ATTCCGTATTACTGCCATGACTA 57.198 39.130 0.00 0.00 0.00 2.59
31 32 5.601583 TTCCGTATTACTGCCATGACTAA 57.398 39.130 0.00 0.00 0.00 2.24
32 33 5.601583 TCCGTATTACTGCCATGACTAAA 57.398 39.130 0.00 0.00 0.00 1.85
33 34 5.597806 TCCGTATTACTGCCATGACTAAAG 58.402 41.667 0.00 0.00 0.00 1.85
34 35 5.128171 TCCGTATTACTGCCATGACTAAAGT 59.872 40.000 0.00 0.00 0.00 2.66
35 36 5.815740 CCGTATTACTGCCATGACTAAAGTT 59.184 40.000 0.00 0.00 0.00 2.66
36 37 6.982141 CCGTATTACTGCCATGACTAAAGTTA 59.018 38.462 0.00 0.00 0.00 2.24
37 38 7.169308 CCGTATTACTGCCATGACTAAAGTTAG 59.831 40.741 0.00 0.00 36.82 2.34
38 39 7.705325 CGTATTACTGCCATGACTAAAGTTAGT 59.295 37.037 3.36 3.36 46.11 2.24
44 45 9.601217 ACTGCCATGACTAAAGTTAGTATAAAG 57.399 33.333 3.72 1.64 43.64 1.85
45 46 9.601217 CTGCCATGACTAAAGTTAGTATAAAGT 57.399 33.333 3.72 0.00 43.64 2.66
46 47 9.953565 TGCCATGACTAAAGTTAGTATAAAGTT 57.046 29.630 3.72 0.00 43.64 2.66
67 68 9.918630 AAAGTTGAGTCATCTATTTTGAAATGG 57.081 29.630 4.14 0.00 0.00 3.16
68 69 8.868522 AGTTGAGTCATCTATTTTGAAATGGA 57.131 30.769 1.70 5.21 39.67 3.41
69 70 8.954350 AGTTGAGTCATCTATTTTGAAATGGAG 58.046 33.333 1.70 2.49 38.91 3.86
70 71 7.870509 TGAGTCATCTATTTTGAAATGGAGG 57.129 36.000 7.79 7.79 38.91 4.30
71 72 6.830324 TGAGTCATCTATTTTGAAATGGAGGG 59.170 38.462 12.38 6.38 38.91 4.30
72 73 6.973642 AGTCATCTATTTTGAAATGGAGGGA 58.026 36.000 12.38 8.08 38.91 4.20
73 74 7.059156 AGTCATCTATTTTGAAATGGAGGGAG 58.941 38.462 12.38 3.00 38.91 4.30
128 129 7.837863 TGAGAGTAAAAATCTATTCTCCACGT 58.162 34.615 0.00 0.00 35.06 4.49
154 155 8.998814 TCTAATCCCTCCATAAACTTCATTACA 58.001 33.333 0.00 0.00 0.00 2.41
178 179 7.397192 ACACAAACTATCATTTCCTGCCTAAAT 59.603 33.333 0.00 0.00 0.00 1.40
179 180 8.902806 CACAAACTATCATTTCCTGCCTAAATA 58.097 33.333 0.00 0.00 0.00 1.40
180 181 9.646522 ACAAACTATCATTTCCTGCCTAAATAT 57.353 29.630 0.00 0.00 0.00 1.28
218 219 3.764885 CTGCAAGTACCATTGGTAAGC 57.235 47.619 17.08 19.32 40.12 3.09
219 220 2.080693 TGCAAGTACCATTGGTAAGCG 58.919 47.619 17.08 9.23 40.12 4.68
220 221 1.202143 GCAAGTACCATTGGTAAGCGC 60.202 52.381 17.08 14.67 40.12 5.92
221 222 1.062002 CAAGTACCATTGGTAAGCGCG 59.938 52.381 17.08 0.00 40.12 6.86
222 223 0.533491 AGTACCATTGGTAAGCGCGA 59.467 50.000 17.08 0.00 40.12 5.87
223 224 1.066716 AGTACCATTGGTAAGCGCGAA 60.067 47.619 17.08 0.00 40.12 4.70
225 226 1.014352 ACCATTGGTAAGCGCGAATC 58.986 50.000 12.10 0.00 32.11 2.52
226 227 1.013596 CCATTGGTAAGCGCGAATCA 58.986 50.000 12.10 0.00 0.00 2.57
227 228 1.400142 CCATTGGTAAGCGCGAATCAA 59.600 47.619 12.10 12.17 0.00 2.57
228 229 2.440501 CATTGGTAAGCGCGAATCAAC 58.559 47.619 12.10 0.00 0.00 3.18
231 232 1.463056 TGGTAAGCGCGAATCAACTTG 59.537 47.619 12.10 0.00 0.00 3.16
232 233 1.463444 GGTAAGCGCGAATCAACTTGT 59.537 47.619 12.10 0.00 0.00 3.16
233 234 2.495939 GTAAGCGCGAATCAACTTGTG 58.504 47.619 12.10 0.00 0.00 3.33
234 235 0.238289 AAGCGCGAATCAACTTGTGG 59.762 50.000 12.10 0.00 0.00 4.17
235 236 0.884704 AGCGCGAATCAACTTGTGGT 60.885 50.000 12.10 0.00 0.00 4.16
236 237 0.040425 GCGCGAATCAACTTGTGGTT 60.040 50.000 12.10 0.00 38.93 3.67
248 249 4.021102 ACTTGTGGTTGAGATGGTTAGG 57.979 45.455 0.00 0.00 0.00 2.69
249 250 3.394606 ACTTGTGGTTGAGATGGTTAGGT 59.605 43.478 0.00 0.00 0.00 3.08
250 251 3.417069 TGTGGTTGAGATGGTTAGGTG 57.583 47.619 0.00 0.00 0.00 4.00
251 252 2.039746 TGTGGTTGAGATGGTTAGGTGG 59.960 50.000 0.00 0.00 0.00 4.61
252 253 2.304761 GTGGTTGAGATGGTTAGGTGGA 59.695 50.000 0.00 0.00 0.00 4.02
253 254 2.304761 TGGTTGAGATGGTTAGGTGGAC 59.695 50.000 0.00 0.00 0.00 4.02
254 255 2.304761 GGTTGAGATGGTTAGGTGGACA 59.695 50.000 0.00 0.00 0.00 4.02
255 256 3.244770 GGTTGAGATGGTTAGGTGGACAA 60.245 47.826 0.00 0.00 0.00 3.18
256 257 4.567747 GGTTGAGATGGTTAGGTGGACAAT 60.568 45.833 0.00 0.00 0.00 2.71
257 258 4.220693 TGAGATGGTTAGGTGGACAATG 57.779 45.455 0.00 0.00 0.00 2.82
258 259 3.054434 TGAGATGGTTAGGTGGACAATGG 60.054 47.826 0.00 0.00 0.00 3.16
259 260 2.919602 AGATGGTTAGGTGGACAATGGT 59.080 45.455 0.00 0.00 0.00 3.55
260 261 4.108570 AGATGGTTAGGTGGACAATGGTA 58.891 43.478 0.00 0.00 0.00 3.25
261 262 4.726825 AGATGGTTAGGTGGACAATGGTAT 59.273 41.667 0.00 0.00 0.00 2.73
262 263 4.497291 TGGTTAGGTGGACAATGGTATC 57.503 45.455 0.00 0.00 0.00 2.24
263 264 3.201266 TGGTTAGGTGGACAATGGTATCC 59.799 47.826 0.00 0.00 35.37 2.59
264 265 3.434596 GGTTAGGTGGACAATGGTATCCC 60.435 52.174 0.00 0.00 33.69 3.85
265 266 1.222567 AGGTGGACAATGGTATCCCC 58.777 55.000 0.00 0.00 33.69 4.81
273 274 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
274 275 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
275 276 1.211567 TGGTATCCCCAACCCACCAG 61.212 60.000 0.00 0.00 41.50 4.00
276 277 1.613061 GTATCCCCAACCCACCAGG 59.387 63.158 0.00 0.00 43.78 4.45
289 290 3.004752 CCACCAGGGTTCAAATCCTAG 57.995 52.381 0.00 0.00 37.45 3.02
290 291 2.308866 CCACCAGGGTTCAAATCCTAGT 59.691 50.000 0.00 0.00 37.45 2.57
291 292 3.347216 CACCAGGGTTCAAATCCTAGTG 58.653 50.000 6.28 6.28 41.36 2.74
292 293 2.290960 ACCAGGGTTCAAATCCTAGTGC 60.291 50.000 0.00 0.00 37.45 4.40
293 294 2.025887 CCAGGGTTCAAATCCTAGTGCT 60.026 50.000 0.00 0.00 37.45 4.40
294 295 3.562176 CCAGGGTTCAAATCCTAGTGCTT 60.562 47.826 0.00 0.00 37.45 3.91
295 296 3.441572 CAGGGTTCAAATCCTAGTGCTTG 59.558 47.826 0.00 0.00 37.45 4.01
296 297 2.164422 GGGTTCAAATCCTAGTGCTTGC 59.836 50.000 0.00 0.00 0.00 4.01
297 298 2.819608 GGTTCAAATCCTAGTGCTTGCA 59.180 45.455 0.00 0.00 0.00 4.08
298 299 3.445096 GGTTCAAATCCTAGTGCTTGCAT 59.555 43.478 0.00 0.00 0.00 3.96
299 300 4.082026 GGTTCAAATCCTAGTGCTTGCATT 60.082 41.667 0.00 0.00 0.00 3.56
300 301 5.125417 GGTTCAAATCCTAGTGCTTGCATTA 59.875 40.000 0.00 0.00 0.00 1.90
301 302 6.183360 GGTTCAAATCCTAGTGCTTGCATTAT 60.183 38.462 0.00 0.00 0.00 1.28
302 303 7.260603 GTTCAAATCCTAGTGCTTGCATTATT 58.739 34.615 0.00 0.00 0.00 1.40
303 304 7.408756 TCAAATCCTAGTGCTTGCATTATTT 57.591 32.000 0.00 0.00 0.00 1.40
304 305 7.839907 TCAAATCCTAGTGCTTGCATTATTTT 58.160 30.769 0.00 0.00 0.00 1.82
305 306 8.313292 TCAAATCCTAGTGCTTGCATTATTTTT 58.687 29.630 0.00 0.00 0.00 1.94
306 307 8.385111 CAAATCCTAGTGCTTGCATTATTTTTG 58.615 33.333 0.00 6.06 0.00 2.44
307 308 5.964758 TCCTAGTGCTTGCATTATTTTTGG 58.035 37.500 0.00 0.00 0.00 3.28
308 309 5.714333 TCCTAGTGCTTGCATTATTTTTGGA 59.286 36.000 0.00 0.00 0.00 3.53
309 310 6.380846 TCCTAGTGCTTGCATTATTTTTGGAT 59.619 34.615 0.00 0.00 0.00 3.41
310 311 7.043565 CCTAGTGCTTGCATTATTTTTGGATT 58.956 34.615 0.00 0.00 0.00 3.01
311 312 7.550196 CCTAGTGCTTGCATTATTTTTGGATTT 59.450 33.333 0.00 0.00 0.00 2.17
312 313 9.585099 CTAGTGCTTGCATTATTTTTGGATTTA 57.415 29.630 0.00 0.00 0.00 1.40
314 315 9.452287 AGTGCTTGCATTATTTTTGGATTTATT 57.548 25.926 0.00 0.00 0.00 1.40
326 327 8.770438 TTTTTGGATTTATTTCAGGATTTCCG 57.230 30.769 0.00 0.00 42.08 4.30
327 328 6.463995 TTGGATTTATTTCAGGATTTCCGG 57.536 37.500 0.00 0.00 42.08 5.14
328 329 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
329 330 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
330 331 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
331 332 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
332 333 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
333 334 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
334 335 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
346 347 2.762360 CGATGCGCTTTTAGTGGGA 58.238 52.632 9.73 0.00 0.00 4.37
347 348 0.652592 CGATGCGCTTTTAGTGGGAG 59.347 55.000 9.73 0.00 0.00 4.30
348 349 1.739035 CGATGCGCTTTTAGTGGGAGA 60.739 52.381 9.73 0.00 0.00 3.71
349 350 2.356135 GATGCGCTTTTAGTGGGAGAA 58.644 47.619 9.73 0.00 0.00 2.87
350 351 1.808411 TGCGCTTTTAGTGGGAGAAG 58.192 50.000 9.73 0.00 0.00 2.85
351 352 1.346395 TGCGCTTTTAGTGGGAGAAGA 59.654 47.619 9.73 0.00 0.00 2.87
352 353 1.732809 GCGCTTTTAGTGGGAGAAGAC 59.267 52.381 0.00 0.00 0.00 3.01
353 354 1.993370 CGCTTTTAGTGGGAGAAGACG 59.007 52.381 0.00 0.00 0.00 4.18
354 355 2.609737 CGCTTTTAGTGGGAGAAGACGT 60.610 50.000 0.00 0.00 0.00 4.34
355 356 3.400255 GCTTTTAGTGGGAGAAGACGTT 58.600 45.455 0.00 0.00 0.00 3.99
356 357 3.432592 GCTTTTAGTGGGAGAAGACGTTC 59.567 47.826 0.00 0.00 0.00 3.95
357 358 3.672767 TTTAGTGGGAGAAGACGTTCC 57.327 47.619 0.00 0.00 32.48 3.62
368 369 3.357919 ACGTTCCCGTCGATGACA 58.642 55.556 6.11 0.00 46.28 3.58
369 370 1.661480 ACGTTCCCGTCGATGACAA 59.339 52.632 6.11 0.00 46.28 3.18
370 371 0.388134 ACGTTCCCGTCGATGACAAG 60.388 55.000 6.11 0.00 46.28 3.16
371 372 1.076533 CGTTCCCGTCGATGACAAGG 61.077 60.000 6.11 0.00 32.09 3.61
372 373 0.037605 GTTCCCGTCGATGACAAGGT 60.038 55.000 6.11 0.00 32.09 3.50
373 374 0.037697 TTCCCGTCGATGACAAGGTG 60.038 55.000 6.11 0.00 32.09 4.00
374 375 2.100631 CCCGTCGATGACAAGGTGC 61.101 63.158 6.11 0.00 32.09 5.01
375 376 2.100631 CCGTCGATGACAAGGTGCC 61.101 63.158 6.11 0.00 32.09 5.01
376 377 1.079819 CGTCGATGACAAGGTGCCT 60.080 57.895 0.00 0.00 32.09 4.75
377 378 0.172578 CGTCGATGACAAGGTGCCTA 59.827 55.000 0.00 0.00 32.09 3.93
378 379 1.641577 GTCGATGACAAGGTGCCTAC 58.358 55.000 0.00 0.00 32.09 3.18
379 380 0.172578 TCGATGACAAGGTGCCTACG 59.827 55.000 0.00 0.00 0.00 3.51
380 381 0.806102 CGATGACAAGGTGCCTACGG 60.806 60.000 0.00 0.00 0.00 4.02
381 382 0.249398 GATGACAAGGTGCCTACGGT 59.751 55.000 0.00 0.00 0.00 4.83
382 383 1.479323 GATGACAAGGTGCCTACGGTA 59.521 52.381 0.00 0.00 0.00 4.02
383 384 1.340088 TGACAAGGTGCCTACGGTAA 58.660 50.000 0.00 0.00 0.00 2.85
384 385 1.001181 TGACAAGGTGCCTACGGTAAC 59.999 52.381 0.00 0.00 0.00 2.50
385 386 1.274447 GACAAGGTGCCTACGGTAACT 59.726 52.381 0.00 0.00 36.78 2.24
386 387 1.695788 ACAAGGTGCCTACGGTAACTT 59.304 47.619 0.00 0.00 45.83 2.66
387 388 2.289257 ACAAGGTGCCTACGGTAACTTC 60.289 50.000 0.00 0.00 41.30 3.01
388 389 0.529378 AGGTGCCTACGGTAACTTCG 59.471 55.000 0.00 0.00 28.97 3.79
389 390 0.244721 GGTGCCTACGGTAACTTCGT 59.755 55.000 0.00 0.00 43.64 3.85
390 391 1.472480 GGTGCCTACGGTAACTTCGTA 59.528 52.381 0.00 0.00 41.38 3.43
391 392 2.094752 GGTGCCTACGGTAACTTCGTAA 60.095 50.000 0.00 0.00 41.62 3.18
392 393 3.574614 GTGCCTACGGTAACTTCGTAAA 58.425 45.455 0.00 0.00 41.62 2.01
393 394 4.176271 GTGCCTACGGTAACTTCGTAAAT 58.824 43.478 0.00 0.00 41.62 1.40
394 395 4.266265 GTGCCTACGGTAACTTCGTAAATC 59.734 45.833 0.00 0.00 41.62 2.17
395 396 4.158394 TGCCTACGGTAACTTCGTAAATCT 59.842 41.667 0.00 0.00 41.62 2.40
396 397 4.737279 GCCTACGGTAACTTCGTAAATCTC 59.263 45.833 0.00 0.00 41.62 2.75
397 398 5.677091 GCCTACGGTAACTTCGTAAATCTCA 60.677 44.000 0.00 0.00 41.62 3.27
398 399 6.324819 CCTACGGTAACTTCGTAAATCTCAA 58.675 40.000 0.00 0.00 41.62 3.02
399 400 6.471519 CCTACGGTAACTTCGTAAATCTCAAG 59.528 42.308 0.00 0.00 41.62 3.02
400 401 6.017400 ACGGTAACTTCGTAAATCTCAAGA 57.983 37.500 0.00 0.00 39.22 3.02
401 402 6.628185 ACGGTAACTTCGTAAATCTCAAGAT 58.372 36.000 0.00 0.00 39.22 2.40
402 403 6.530534 ACGGTAACTTCGTAAATCTCAAGATG 59.469 38.462 0.00 0.00 39.22 2.90
403 404 6.750501 CGGTAACTTCGTAAATCTCAAGATGA 59.249 38.462 0.00 0.00 34.49 2.92
404 405 7.435488 CGGTAACTTCGTAAATCTCAAGATGAT 59.565 37.037 0.00 0.00 34.49 2.45
405 406 8.543774 GGTAACTTCGTAAATCTCAAGATGATG 58.456 37.037 0.00 0.00 34.49 3.07
406 407 9.088512 GTAACTTCGTAAATCTCAAGATGATGT 57.911 33.333 0.00 0.00 34.49 3.06
407 408 7.531280 ACTTCGTAAATCTCAAGATGATGTG 57.469 36.000 0.00 0.00 34.49 3.21
408 409 5.973651 TCGTAAATCTCAAGATGATGTGC 57.026 39.130 0.00 0.00 34.49 4.57
409 410 4.811024 TCGTAAATCTCAAGATGATGTGCC 59.189 41.667 0.00 0.00 34.49 5.01
410 411 4.318333 CGTAAATCTCAAGATGATGTGCCG 60.318 45.833 0.00 0.00 34.49 5.69
411 412 2.251409 ATCTCAAGATGATGTGCCGG 57.749 50.000 0.00 0.00 32.68 6.13
412 413 0.462581 TCTCAAGATGATGTGCCGGC 60.463 55.000 22.73 22.73 0.00 6.13
413 414 0.463295 CTCAAGATGATGTGCCGGCT 60.463 55.000 29.70 7.33 0.00 5.52
414 415 0.462581 TCAAGATGATGTGCCGGCTC 60.463 55.000 29.70 25.38 0.00 4.70
415 416 0.745486 CAAGATGATGTGCCGGCTCA 60.745 55.000 31.27 31.27 0.00 4.26
416 417 0.463295 AAGATGATGTGCCGGCTCAG 60.463 55.000 32.06 0.00 0.00 3.35
417 418 1.153289 GATGATGTGCCGGCTCAGT 60.153 57.895 32.06 21.65 0.00 3.41
418 419 1.153289 ATGATGTGCCGGCTCAGTC 60.153 57.895 32.06 26.67 0.00 3.51
419 420 1.620739 ATGATGTGCCGGCTCAGTCT 61.621 55.000 32.06 18.70 0.00 3.24
420 421 1.078848 GATGTGCCGGCTCAGTCTT 60.079 57.895 32.06 18.34 0.00 3.01
421 422 0.674895 GATGTGCCGGCTCAGTCTTT 60.675 55.000 32.06 17.98 0.00 2.52
422 423 0.674895 ATGTGCCGGCTCAGTCTTTC 60.675 55.000 32.06 10.69 0.00 2.62
423 424 2.048222 TGCCGGCTCAGTCTTTCG 60.048 61.111 29.70 0.00 0.00 3.46
424 425 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
425 426 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
426 427 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
427 428 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
428 429 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
429 430 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
430 431 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
431 432 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
432 433 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
433 434 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
434 435 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
435 436 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
436 437 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
437 438 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
438 439 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
439 440 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
440 441 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
441 442 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
442 443 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
443 444 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
444 445 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
445 446 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
446 447 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
447 448 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
448 449 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
449 450 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
450 451 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
451 452 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
452 453 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
453 454 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
454 455 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
455 456 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
456 457 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
457 458 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
460 461 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
461 462 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
462 463 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
463 464 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
464 465 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
465 466 0.233590 GTGCGTGTGTGCGTTCATAA 59.766 50.000 0.00 0.00 37.81 1.90
466 467 0.510790 TGCGTGTGTGCGTTCATAAG 59.489 50.000 0.00 0.00 37.81 1.73
467 468 0.787787 GCGTGTGTGCGTTCATAAGA 59.212 50.000 0.00 0.00 0.00 2.10
468 469 1.201812 GCGTGTGTGCGTTCATAAGAG 60.202 52.381 0.00 0.00 0.00 2.85
469 470 2.058798 CGTGTGTGCGTTCATAAGAGT 58.941 47.619 0.00 0.00 0.00 3.24
470 471 2.159973 CGTGTGTGCGTTCATAAGAGTG 60.160 50.000 0.00 0.00 0.00 3.51
471 472 3.057019 GTGTGTGCGTTCATAAGAGTGA 58.943 45.455 0.00 0.00 0.00 3.41
472 473 3.493129 GTGTGTGCGTTCATAAGAGTGAA 59.507 43.478 0.00 0.00 35.84 3.18
473 474 4.152402 GTGTGTGCGTTCATAAGAGTGAAT 59.848 41.667 0.00 0.00 39.99 2.57
474 475 4.152223 TGTGTGCGTTCATAAGAGTGAATG 59.848 41.667 4.85 4.85 44.27 2.67
475 476 4.152402 GTGTGCGTTCATAAGAGTGAATGT 59.848 41.667 9.71 0.00 43.66 2.71
476 477 5.347635 GTGTGCGTTCATAAGAGTGAATGTA 59.652 40.000 9.71 3.79 43.66 2.29
477 478 6.036083 GTGTGCGTTCATAAGAGTGAATGTAT 59.964 38.462 9.71 0.00 43.66 2.29
478 479 6.035975 TGTGCGTTCATAAGAGTGAATGTATG 59.964 38.462 9.71 0.00 43.66 2.39
479 480 5.006649 TGCGTTCATAAGAGTGAATGTATGC 59.993 40.000 9.71 0.00 43.66 3.14
480 481 5.660391 CGTTCATAAGAGTGAATGTATGCG 58.340 41.667 0.00 0.00 39.99 4.73
481 482 5.435557 GTTCATAAGAGTGAATGTATGCGC 58.564 41.667 0.00 0.00 39.99 6.09
482 483 3.735746 TCATAAGAGTGAATGTATGCGCG 59.264 43.478 0.00 0.00 0.00 6.86
483 484 2.010145 AAGAGTGAATGTATGCGCGT 57.990 45.000 8.43 7.55 0.00 6.01
484 485 1.280982 AGAGTGAATGTATGCGCGTG 58.719 50.000 13.61 0.00 0.00 5.34
485 486 0.999406 GAGTGAATGTATGCGCGTGT 59.001 50.000 13.61 0.00 0.00 4.49
486 487 2.159296 AGAGTGAATGTATGCGCGTGTA 60.159 45.455 13.61 0.62 0.00 2.90
487 488 2.794910 GAGTGAATGTATGCGCGTGTAT 59.205 45.455 13.61 4.63 0.00 2.29
488 489 3.972403 AGTGAATGTATGCGCGTGTATA 58.028 40.909 13.61 2.40 0.00 1.47
489 490 4.556233 AGTGAATGTATGCGCGTGTATAT 58.444 39.130 13.61 2.11 0.00 0.86
490 491 4.385748 AGTGAATGTATGCGCGTGTATATG 59.614 41.667 13.61 0.00 0.00 1.78
491 492 4.384547 GTGAATGTATGCGCGTGTATATGA 59.615 41.667 13.61 1.21 0.00 2.15
492 493 4.621034 TGAATGTATGCGCGTGTATATGAG 59.379 41.667 13.61 0.00 0.00 2.90
493 494 2.324860 TGTATGCGCGTGTATATGAGC 58.675 47.619 13.61 0.41 38.85 4.26
496 497 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
497 498 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
498 499 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
499 500 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
500 501 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
501 502 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
502 503 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
503 504 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
504 505 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
505 506 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
506 507 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
507 508 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
508 509 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
509 510 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
510 511 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
511 512 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
512 513 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
513 514 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
514 515 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
515 516 2.670414 GCTTGTGTCTGTACTGATGCTC 59.330 50.000 5.69 0.00 0.00 4.26
516 517 3.862264 GCTTGTGTCTGTACTGATGCTCA 60.862 47.826 5.69 0.00 0.00 4.26
517 518 4.309933 CTTGTGTCTGTACTGATGCTCAA 58.690 43.478 5.69 6.69 0.00 3.02
518 519 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
519 520 4.702831 TGTGTCTGTACTGATGCTCAAAA 58.297 39.130 5.69 0.00 0.00 2.44
520 521 5.122519 TGTGTCTGTACTGATGCTCAAAAA 58.877 37.500 5.69 0.00 0.00 1.94
544 545 3.515330 AGTAGCATTGGCAAGCAAATC 57.485 42.857 19.03 9.32 44.61 2.17
547 548 3.412237 AGCATTGGCAAGCAAATCTTT 57.588 38.095 19.03 0.00 44.61 2.52
611 1868 6.446781 TTTTTCAAATTCATTGGCAAGCAA 57.553 29.167 5.96 0.77 39.62 3.91
733 1990 4.388499 TCGCGCAACCTTCCCCTC 62.388 66.667 8.75 0.00 0.00 4.30
802 2059 1.228003 TCCGATCCGCTCTCCTCTC 60.228 63.158 0.00 0.00 0.00 3.20
820 2077 2.203422 CCCCCACAGCCGAAAACA 60.203 61.111 0.00 0.00 0.00 2.83
927 2185 4.284860 CCGCATCGGGATCTCGCA 62.285 66.667 11.01 0.00 44.15 5.10
973 2245 1.612739 GGACGGAGGGAGGGTTTCT 60.613 63.158 0.00 0.00 0.00 2.52
984 2256 1.560146 GAGGGTTTCTCGGGAATTCCT 59.440 52.381 23.63 16.63 37.13 3.36
1062 2334 4.416738 GGCAGCTGGGTGGAGTCC 62.417 72.222 17.12 0.73 0.00 3.85
1222 2494 1.226974 GCGCTGCTTACCATCGAGA 60.227 57.895 0.00 0.00 35.19 4.04
1251 2523 1.757118 CCTTGCCTGTCGATCTCCTAA 59.243 52.381 0.00 0.00 0.00 2.69
1252 2524 2.223923 CCTTGCCTGTCGATCTCCTAAG 60.224 54.545 0.00 0.00 0.00 2.18
1308 2582 3.418068 GCTGACAGACGCTGGTGC 61.418 66.667 6.65 7.97 35.51 5.01
1325 2599 4.645535 TGGTGCCTGATTATGCTTAGATC 58.354 43.478 0.00 0.00 0.00 2.75
1389 2664 1.061579 GGGGTTAGGGATAGGGTGAGT 60.062 57.143 0.00 0.00 0.00 3.41
1508 2783 6.020440 CGGTATTGCTTTTATTCTGCATTGTG 60.020 38.462 0.00 0.00 36.55 3.33
1510 2785 4.524316 TGCTTTTATTCTGCATTGTGCT 57.476 36.364 3.41 0.00 45.31 4.40
1575 2850 8.050778 TCAGCCAATCGAGTACATTAATTTTT 57.949 30.769 0.00 0.00 0.00 1.94
1610 2885 7.234355 AGTTCAATTTAGTGGAGAATGACCTT 58.766 34.615 0.00 0.00 0.00 3.50
1611 2886 7.175641 AGTTCAATTTAGTGGAGAATGACCTTG 59.824 37.037 0.00 0.00 0.00 3.61
1630 2905 7.669722 TGACCTTGCTAGTTAATTCTTCCAAAT 59.330 33.333 0.00 0.00 0.00 2.32
1654 2929 5.302360 ACGGTAAAAGTTAGCATTCTGTCA 58.698 37.500 0.00 0.00 0.00 3.58
1681 2956 3.715628 TTTTTGAGAGCTGTTCTTGGC 57.284 42.857 0.00 0.00 35.87 4.52
1695 4189 3.138884 TCTTGGCTTCAAGTATGTGCA 57.861 42.857 6.10 0.00 45.92 4.57
1699 4193 1.399791 GGCTTCAAGTATGTGCAGAGC 59.600 52.381 0.00 0.00 0.00 4.09
1702 4196 3.128242 GCTTCAAGTATGTGCAGAGCAAT 59.872 43.478 0.00 0.00 41.47 3.56
1726 4220 1.067000 CAAAATTGGCCCGAGCAATGA 60.067 47.619 0.00 0.00 42.56 2.57
1791 4356 8.778358 CAACTAGATGATTCTGTTTATAAGCCC 58.222 37.037 0.00 0.00 33.17 5.19
1820 4386 5.062308 CAGTTTATTCTCGCTGACTGTTACC 59.938 44.000 0.00 0.00 32.12 2.85
1835 4401 4.050553 CTGTTACCCACAAATTTGCTGTG 58.949 43.478 18.12 9.73 43.15 3.66
1910 4476 6.183360 GCAGGAATGATTACAAGTAAGTGCAT 60.183 38.462 0.00 0.80 0.00 3.96
1968 4534 7.239763 TCTACTTAACAATGTGATCCTGACA 57.760 36.000 0.00 0.00 0.00 3.58
2096 4662 6.823689 TCATCATTAGGTAAAAGCCAGAAGTC 59.176 38.462 0.00 0.00 0.00 3.01
2097 4663 6.121776 TCATTAGGTAAAAGCCAGAAGTCA 57.878 37.500 0.00 0.00 0.00 3.41
2136 4702 2.381725 TGAGATGTTCAGCTGCTGAG 57.618 50.000 28.91 6.55 41.75 3.35
2137 4703 1.622312 TGAGATGTTCAGCTGCTGAGT 59.378 47.619 28.91 19.95 41.75 3.41
2138 4704 2.001159 GAGATGTTCAGCTGCTGAGTG 58.999 52.381 28.91 6.36 41.75 3.51
2139 4705 0.447011 GATGTTCAGCTGCTGAGTGC 59.553 55.000 28.91 22.58 41.75 4.40
2140 4706 0.036448 ATGTTCAGCTGCTGAGTGCT 59.964 50.000 28.91 14.51 41.75 4.40
2148 4714 1.401148 GCTGCTGAGTGCTGACAATTG 60.401 52.381 3.24 3.24 42.27 2.32
2151 4717 1.875514 GCTGAGTGCTGACAATTGTGA 59.124 47.619 17.58 6.71 38.95 3.58
2161 4727 4.790766 GCTGACAATTGTGAAAGTCTGTGG 60.791 45.833 17.58 0.00 33.96 4.17
2168 4734 4.422073 TGTGAAAGTCTGTGGTCATTCT 57.578 40.909 0.00 0.00 0.00 2.40
2441 5007 5.876612 TTTGTGTTTTCTTGCAGCATTTT 57.123 30.435 0.00 0.00 0.00 1.82
2570 5136 6.655848 ACTTGTAGGATCTCTATCGGTATGTC 59.344 42.308 0.00 0.00 32.44 3.06
2591 5157 6.546395 TGTCTCCGTTCTACTTACGAATAAC 58.454 40.000 0.00 0.00 41.33 1.89
2611 5177 9.638300 GAATAACTAGCTCAATGTTTATTCACG 57.362 33.333 0.00 0.00 0.00 4.35
2613 5179 7.435068 AACTAGCTCAATGTTTATTCACGTT 57.565 32.000 0.00 0.00 0.00 3.99
2737 5304 5.849475 TGGGATAAACCAGCTAATCTATCCA 59.151 40.000 18.60 6.42 37.57 3.41
2869 5436 8.414003 AGTGATCGTACTTCAATATCTGCTAAA 58.586 33.333 0.00 0.00 0.00 1.85
2919 5486 9.710818 ACTCCCTCTGTAACTTAATATAAGACA 57.289 33.333 4.24 0.00 0.00 3.41
2951 5518 6.770303 TGACATTGTCATGGACTCTAAAAACA 59.230 34.615 15.41 0.00 37.67 2.83
3218 5785 5.329399 TCAAGGTAACATATTTGGGCTTGT 58.671 37.500 0.00 0.00 41.41 3.16
3219 5786 6.486056 TCAAGGTAACATATTTGGGCTTGTA 58.514 36.000 0.00 0.00 41.41 2.41
3220 5787 6.601613 TCAAGGTAACATATTTGGGCTTGTAG 59.398 38.462 0.00 0.00 41.41 2.74
3221 5788 6.074698 AGGTAACATATTTGGGCTTGTAGT 57.925 37.500 0.00 0.00 41.41 2.73
3249 5816 0.538584 TGGTGCTCTAGATGGTGCTG 59.461 55.000 0.00 0.00 0.00 4.41
3325 5892 9.613428 TGCTTATACTAAGTATGCAGTGAATTT 57.387 29.630 0.00 0.00 28.79 1.82
3359 5927 3.502211 GCTACTTGCTGAAGTGCCTTTTA 59.498 43.478 0.00 0.00 42.66 1.52
3364 5932 1.402062 GCTGAAGTGCCTTTTAGCAGC 60.402 52.381 0.00 0.00 45.14 5.25
3371 5939 3.944015 AGTGCCTTTTAGCAGCTATCTTG 59.056 43.478 2.02 0.00 45.14 3.02
3377 5945 5.877012 CCTTTTAGCAGCTATCTTGTCTCAA 59.123 40.000 2.02 0.00 0.00 3.02
3394 5962 4.156008 GTCTCAACAAAGTTGGACACAGTT 59.844 41.667 18.18 0.00 0.00 3.16
3417 5985 8.816894 AGTTATTGAATGAGGTCTGAGTAAAGA 58.183 33.333 0.00 0.00 0.00 2.52
3448 6016 7.912778 ATGTTACCCAAATATGTAATTGCCT 57.087 32.000 0.00 0.00 30.35 4.75
3522 6090 4.437682 ACTGAACTCATGGAACCAAGAA 57.562 40.909 0.00 0.00 0.00 2.52
3589 6157 8.091449 GTCTAGGACAATCCAATTATCGATTCT 58.909 37.037 1.71 0.00 39.61 2.40
3672 6240 2.094078 CCATGGGGCTACACAACATTTG 60.094 50.000 2.85 0.00 0.00 2.32
3746 6346 0.460284 CTCGGTGCCATGGTCACTAC 60.460 60.000 27.36 16.74 34.97 2.73
3766 6366 5.658634 ACTACTATGCCATCTTGAGTTCAGA 59.341 40.000 0.00 0.00 0.00 3.27
3835 6435 9.458374 AATGTTTCTGTTAAACTTGATAAACCG 57.542 29.630 0.00 0.00 0.00 4.44
3836 6436 7.987649 TGTTTCTGTTAAACTTGATAAACCGT 58.012 30.769 0.00 0.00 0.00 4.83
3879 6480 7.279536 AGTTAGTGACAATGCTCACAGATATTG 59.720 37.037 14.80 0.00 42.74 1.90
4048 6651 2.029649 CCCTTCTTCTGGTTTGCACATG 60.030 50.000 0.00 0.00 0.00 3.21
4249 6859 4.713814 ACTTGAGATGCTCAGTGATCCTTA 59.286 41.667 0.00 0.00 41.75 2.69
4260 6870 2.107204 AGTGATCCTTATGGCCATGGTC 59.893 50.000 29.04 17.42 0.00 4.02
4361 6971 1.171308 TTCGAGGAACCGGTAGAGTG 58.829 55.000 8.00 0.00 0.00 3.51
4363 6973 0.450983 CGAGGAACCGGTAGAGTGTC 59.549 60.000 8.00 0.00 0.00 3.67
4364 6974 1.542492 GAGGAACCGGTAGAGTGTCA 58.458 55.000 8.00 0.00 0.00 3.58
4451 7065 5.882557 GGTATAGTATTGGGGATGCATCTTG 59.117 44.000 25.28 0.00 0.00 3.02
4481 7095 7.096023 CGGCTATCATCTGTAACTGTTGTATTC 60.096 40.741 2.69 0.00 0.00 1.75
4538 7152 7.601705 AAAAATCATTCCCTCTTTCACTTCA 57.398 32.000 0.00 0.00 0.00 3.02
4548 7162 5.767168 CCCTCTTTCACTTCAGTTGAATCTT 59.233 40.000 0.00 0.00 33.01 2.40
4554 7168 2.808543 ACTTCAGTTGAATCTTCGCACC 59.191 45.455 0.00 0.00 33.01 5.01
4593 7209 6.488344 TGGTGATGTTCTTTGCTTGTGTAATA 59.512 34.615 0.00 0.00 0.00 0.98
4744 7360 5.241506 GTCTCATCAAACCCAACAATCTCAA 59.758 40.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.646267 TGGCAGTAATACGGAATAAAAGTCT 58.354 36.000 0.00 0.00 0.00 3.24
1 2 6.913873 TGGCAGTAATACGGAATAAAAGTC 57.086 37.500 0.00 0.00 0.00 3.01
2 3 7.012044 GTCATGGCAGTAATACGGAATAAAAGT 59.988 37.037 0.00 0.00 0.00 2.66
3 4 7.226720 AGTCATGGCAGTAATACGGAATAAAAG 59.773 37.037 0.00 0.00 0.00 2.27
4 5 7.051623 AGTCATGGCAGTAATACGGAATAAAA 58.948 34.615 0.00 0.00 0.00 1.52
5 6 6.588204 AGTCATGGCAGTAATACGGAATAAA 58.412 36.000 0.00 0.00 0.00 1.40
6 7 6.169557 AGTCATGGCAGTAATACGGAATAA 57.830 37.500 0.00 0.00 0.00 1.40
7 8 5.801531 AGTCATGGCAGTAATACGGAATA 57.198 39.130 0.00 0.00 0.00 1.75
8 9 4.689612 AGTCATGGCAGTAATACGGAAT 57.310 40.909 0.00 0.00 0.00 3.01
9 10 5.601583 TTAGTCATGGCAGTAATACGGAA 57.398 39.130 0.00 0.00 0.00 4.30
10 11 5.128171 ACTTTAGTCATGGCAGTAATACGGA 59.872 40.000 0.00 0.00 0.00 4.69
11 12 5.357257 ACTTTAGTCATGGCAGTAATACGG 58.643 41.667 0.00 0.00 0.00 4.02
12 13 6.903883 AACTTTAGTCATGGCAGTAATACG 57.096 37.500 0.00 0.00 0.00 3.06
13 14 8.943909 ACTAACTTTAGTCATGGCAGTAATAC 57.056 34.615 0.00 0.00 39.72 1.89
18 19 9.601217 CTTTATACTAACTTTAGTCATGGCAGT 57.399 33.333 0.00 0.00 42.66 4.40
19 20 9.601217 ACTTTATACTAACTTTAGTCATGGCAG 57.399 33.333 0.00 0.00 42.66 4.85
20 21 9.953565 AACTTTATACTAACTTTAGTCATGGCA 57.046 29.630 0.00 0.00 42.66 4.92
41 42 9.918630 CCATTTCAAAATAGATGACTCAACTTT 57.081 29.630 0.00 0.00 0.00 2.66
42 43 9.300681 TCCATTTCAAAATAGATGACTCAACTT 57.699 29.630 0.00 0.00 0.00 2.66
43 44 8.868522 TCCATTTCAAAATAGATGACTCAACT 57.131 30.769 0.00 0.00 0.00 3.16
44 45 8.186821 CCTCCATTTCAAAATAGATGACTCAAC 58.813 37.037 0.00 0.00 0.00 3.18
45 46 7.340232 CCCTCCATTTCAAAATAGATGACTCAA 59.660 37.037 0.00 0.00 0.00 3.02
46 47 6.830324 CCCTCCATTTCAAAATAGATGACTCA 59.170 38.462 0.00 0.00 0.00 3.41
47 48 7.056635 TCCCTCCATTTCAAAATAGATGACTC 58.943 38.462 0.00 0.00 0.00 3.36
48 49 6.973642 TCCCTCCATTTCAAAATAGATGACT 58.026 36.000 0.00 0.00 0.00 3.41
49 50 6.830838 ACTCCCTCCATTTCAAAATAGATGAC 59.169 38.462 0.00 0.00 0.00 3.06
50 51 6.973642 ACTCCCTCCATTTCAAAATAGATGA 58.026 36.000 0.00 0.00 0.00 2.92
51 52 7.995488 ACTACTCCCTCCATTTCAAAATAGATG 59.005 37.037 0.00 0.00 0.00 2.90
52 53 8.107196 ACTACTCCCTCCATTTCAAAATAGAT 57.893 34.615 0.00 0.00 0.00 1.98
53 54 7.510675 ACTACTCCCTCCATTTCAAAATAGA 57.489 36.000 0.00 0.00 0.00 1.98
54 55 8.581253 AAACTACTCCCTCCATTTCAAAATAG 57.419 34.615 0.00 0.00 0.00 1.73
55 56 8.950007 AAAACTACTCCCTCCATTTCAAAATA 57.050 30.769 0.00 0.00 0.00 1.40
56 57 7.730332 AGAAAACTACTCCCTCCATTTCAAAAT 59.270 33.333 0.00 0.00 0.00 1.82
57 58 7.066781 AGAAAACTACTCCCTCCATTTCAAAA 58.933 34.615 0.00 0.00 0.00 2.44
58 59 6.610830 AGAAAACTACTCCCTCCATTTCAAA 58.389 36.000 0.00 0.00 0.00 2.69
59 60 6.200878 AGAAAACTACTCCCTCCATTTCAA 57.799 37.500 0.00 0.00 0.00 2.69
60 61 5.843019 AGAAAACTACTCCCTCCATTTCA 57.157 39.130 0.00 0.00 0.00 2.69
61 62 5.351740 CGAAGAAAACTACTCCCTCCATTTC 59.648 44.000 0.00 0.00 0.00 2.17
62 63 5.221864 ACGAAGAAAACTACTCCCTCCATTT 60.222 40.000 0.00 0.00 0.00 2.32
63 64 4.286291 ACGAAGAAAACTACTCCCTCCATT 59.714 41.667 0.00 0.00 0.00 3.16
64 65 3.838903 ACGAAGAAAACTACTCCCTCCAT 59.161 43.478 0.00 0.00 0.00 3.41
65 66 3.236896 ACGAAGAAAACTACTCCCTCCA 58.763 45.455 0.00 0.00 0.00 3.86
66 67 3.957591 ACGAAGAAAACTACTCCCTCC 57.042 47.619 0.00 0.00 0.00 4.30
67 68 6.096001 TGGTATACGAAGAAAACTACTCCCTC 59.904 42.308 0.00 0.00 0.00 4.30
68 69 5.954150 TGGTATACGAAGAAAACTACTCCCT 59.046 40.000 0.00 0.00 0.00 4.20
69 70 6.212888 TGGTATACGAAGAAAACTACTCCC 57.787 41.667 0.00 0.00 0.00 4.30
70 71 7.542025 TCTTGGTATACGAAGAAAACTACTCC 58.458 38.462 23.28 0.00 37.68 3.85
71 72 8.976986 TTCTTGGTATACGAAGAAAACTACTC 57.023 34.615 29.75 0.87 44.06 2.59
111 112 7.071321 AGGGATTAGACGTGGAGAATAGATTTT 59.929 37.037 0.00 0.00 0.00 1.82
116 117 4.218852 GGAGGGATTAGACGTGGAGAATAG 59.781 50.000 0.00 0.00 0.00 1.73
128 129 8.998814 TGTAATGAAGTTTATGGAGGGATTAGA 58.001 33.333 0.00 0.00 0.00 2.10
154 155 7.961326 ATTTAGGCAGGAAATGATAGTTTGT 57.039 32.000 0.00 0.00 0.00 2.83
179 180 9.740710 ACTTGCAGTTTCTTTCCTAGTAATAAT 57.259 29.630 0.00 0.00 0.00 1.28
196 197 3.506067 GCTTACCAATGGTACTTGCAGTT 59.494 43.478 12.35 0.00 37.97 3.16
214 215 1.463056 CCACAAGTTGATTCGCGCTTA 59.537 47.619 10.54 0.00 0.00 3.09
216 217 0.884704 ACCACAAGTTGATTCGCGCT 60.885 50.000 10.54 0.00 0.00 5.92
217 218 0.040425 AACCACAAGTTGATTCGCGC 60.040 50.000 10.54 0.00 37.29 6.86
226 227 4.141251 ACCTAACCATCTCAACCACAAGTT 60.141 41.667 0.00 0.00 40.16 2.66
227 228 3.394606 ACCTAACCATCTCAACCACAAGT 59.605 43.478 0.00 0.00 0.00 3.16
228 229 3.753272 CACCTAACCATCTCAACCACAAG 59.247 47.826 0.00 0.00 0.00 3.16
231 232 2.304761 TCCACCTAACCATCTCAACCAC 59.695 50.000 0.00 0.00 0.00 4.16
232 233 2.304761 GTCCACCTAACCATCTCAACCA 59.695 50.000 0.00 0.00 0.00 3.67
233 234 2.304761 TGTCCACCTAACCATCTCAACC 59.695 50.000 0.00 0.00 0.00 3.77
234 235 3.695830 TGTCCACCTAACCATCTCAAC 57.304 47.619 0.00 0.00 0.00 3.18
235 236 4.567537 CCATTGTCCACCTAACCATCTCAA 60.568 45.833 0.00 0.00 0.00 3.02
236 237 3.054434 CCATTGTCCACCTAACCATCTCA 60.054 47.826 0.00 0.00 0.00 3.27
237 238 3.054361 ACCATTGTCCACCTAACCATCTC 60.054 47.826 0.00 0.00 0.00 2.75
238 239 2.919602 ACCATTGTCCACCTAACCATCT 59.080 45.455 0.00 0.00 0.00 2.90
239 240 3.366052 ACCATTGTCCACCTAACCATC 57.634 47.619 0.00 0.00 0.00 3.51
240 241 4.141251 GGATACCATTGTCCACCTAACCAT 60.141 45.833 0.00 0.00 33.15 3.55
241 242 3.201266 GGATACCATTGTCCACCTAACCA 59.799 47.826 0.00 0.00 33.15 3.67
242 243 3.816994 GGATACCATTGTCCACCTAACC 58.183 50.000 0.00 0.00 33.15 2.85
258 259 1.613061 CCTGGTGGGTTGGGGATAC 59.387 63.158 0.00 0.00 0.00 2.24
259 260 4.179896 CCTGGTGGGTTGGGGATA 57.820 61.111 0.00 0.00 0.00 2.59
269 270 2.308866 ACTAGGATTTGAACCCTGGTGG 59.691 50.000 0.00 0.00 41.78 4.61
270 271 3.721087 ACTAGGATTTGAACCCTGGTG 57.279 47.619 0.00 0.00 41.78 4.17
271 272 2.290960 GCACTAGGATTTGAACCCTGGT 60.291 50.000 0.00 0.00 43.75 4.00
272 273 2.025887 AGCACTAGGATTTGAACCCTGG 60.026 50.000 0.00 0.00 37.12 4.45
273 274 3.356529 AGCACTAGGATTTGAACCCTG 57.643 47.619 0.00 0.00 34.11 4.45
274 275 3.690460 CAAGCACTAGGATTTGAACCCT 58.310 45.455 0.00 0.00 36.60 4.34
275 276 2.164422 GCAAGCACTAGGATTTGAACCC 59.836 50.000 0.00 0.00 0.00 4.11
276 277 2.819608 TGCAAGCACTAGGATTTGAACC 59.180 45.455 0.00 0.00 0.00 3.62
277 278 4.708726 ATGCAAGCACTAGGATTTGAAC 57.291 40.909 0.00 0.00 0.00 3.18
278 279 7.408756 AATAATGCAAGCACTAGGATTTGAA 57.591 32.000 0.00 0.00 0.00 2.69
279 280 7.408756 AAATAATGCAAGCACTAGGATTTGA 57.591 32.000 0.00 0.00 0.00 2.69
280 281 8.385111 CAAAAATAATGCAAGCACTAGGATTTG 58.615 33.333 0.00 1.25 0.00 2.32
281 282 7.550196 CCAAAAATAATGCAAGCACTAGGATTT 59.450 33.333 0.00 0.00 0.00 2.17
282 283 7.043565 CCAAAAATAATGCAAGCACTAGGATT 58.956 34.615 0.00 0.00 0.00 3.01
283 284 6.380846 TCCAAAAATAATGCAAGCACTAGGAT 59.619 34.615 0.00 0.00 0.00 3.24
284 285 5.714333 TCCAAAAATAATGCAAGCACTAGGA 59.286 36.000 0.00 0.00 0.00 2.94
285 286 5.964758 TCCAAAAATAATGCAAGCACTAGG 58.035 37.500 0.00 0.00 0.00 3.02
286 287 8.483307 AAATCCAAAAATAATGCAAGCACTAG 57.517 30.769 0.00 0.00 0.00 2.57
288 289 9.452287 AATAAATCCAAAAATAATGCAAGCACT 57.548 25.926 0.00 0.00 0.00 4.40
300 301 9.382275 CGGAAATCCTGAAATAAATCCAAAAAT 57.618 29.630 0.00 0.00 0.00 1.82
301 302 7.821846 CCGGAAATCCTGAAATAAATCCAAAAA 59.178 33.333 0.00 0.00 0.00 1.94
302 303 7.327214 CCGGAAATCCTGAAATAAATCCAAAA 58.673 34.615 0.00 0.00 0.00 2.44
303 304 6.629291 GCCGGAAATCCTGAAATAAATCCAAA 60.629 38.462 5.05 0.00 0.00 3.28
304 305 5.163457 GCCGGAAATCCTGAAATAAATCCAA 60.163 40.000 5.05 0.00 0.00 3.53
305 306 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
306 307 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
307 308 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
308 309 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
309 310 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
310 311 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
311 312 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
312 313 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
313 314 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
314 315 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
315 316 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
316 317 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
317 318 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
328 329 0.652592 CTCCCACTAAAAGCGCATCG 59.347 55.000 11.47 0.00 0.00 3.84
329 330 2.024176 TCTCCCACTAAAAGCGCATC 57.976 50.000 11.47 0.00 0.00 3.91
330 331 2.027192 TCTTCTCCCACTAAAAGCGCAT 60.027 45.455 11.47 0.00 0.00 4.73
331 332 1.346395 TCTTCTCCCACTAAAAGCGCA 59.654 47.619 11.47 0.00 0.00 6.09
332 333 1.732809 GTCTTCTCCCACTAAAAGCGC 59.267 52.381 0.00 0.00 0.00 5.92
333 334 1.993370 CGTCTTCTCCCACTAAAAGCG 59.007 52.381 0.00 0.00 0.00 4.68
334 335 3.041508 ACGTCTTCTCCCACTAAAAGC 57.958 47.619 0.00 0.00 0.00 3.51
335 336 3.995048 GGAACGTCTTCTCCCACTAAAAG 59.005 47.826 0.00 0.00 0.00 2.27
336 337 3.999046 GGAACGTCTTCTCCCACTAAAA 58.001 45.455 0.00 0.00 0.00 1.52
337 338 3.672767 GGAACGTCTTCTCCCACTAAA 57.327 47.619 0.00 0.00 0.00 1.85
353 354 0.037605 ACCTTGTCATCGACGGGAAC 60.038 55.000 11.25 0.00 34.95 3.62
354 355 0.037697 CACCTTGTCATCGACGGGAA 60.038 55.000 11.25 0.00 34.95 3.97
355 356 1.589630 CACCTTGTCATCGACGGGA 59.410 57.895 11.25 0.00 34.95 5.14
356 357 2.100631 GCACCTTGTCATCGACGGG 61.101 63.158 0.00 0.00 34.95 5.28
357 358 2.100631 GGCACCTTGTCATCGACGG 61.101 63.158 0.00 0.00 34.95 4.79
358 359 0.172578 TAGGCACCTTGTCATCGACG 59.827 55.000 0.00 0.00 34.95 5.12
359 360 1.641577 GTAGGCACCTTGTCATCGAC 58.358 55.000 0.00 0.00 0.00 4.20
360 361 0.172578 CGTAGGCACCTTGTCATCGA 59.827 55.000 0.00 0.00 0.00 3.59
361 362 0.806102 CCGTAGGCACCTTGTCATCG 60.806 60.000 0.00 0.00 46.14 3.84
362 363 3.065575 CCGTAGGCACCTTGTCATC 57.934 57.895 0.00 0.00 46.14 2.92
375 376 7.246311 TCTTGAGATTTACGAAGTTACCGTAG 58.754 38.462 0.00 0.00 37.78 3.51
376 377 7.144722 TCTTGAGATTTACGAAGTTACCGTA 57.855 36.000 0.00 0.00 37.78 4.02
377 378 6.017400 TCTTGAGATTTACGAAGTTACCGT 57.983 37.500 0.00 0.00 37.78 4.83
378 379 6.750501 TCATCTTGAGATTTACGAAGTTACCG 59.249 38.462 0.00 0.00 35.39 4.02
379 380 8.543774 CATCATCTTGAGATTTACGAAGTTACC 58.456 37.037 0.00 0.00 35.39 2.85
380 381 9.088512 ACATCATCTTGAGATTTACGAAGTTAC 57.911 33.333 0.00 0.00 35.39 2.50
381 382 9.087424 CACATCATCTTGAGATTTACGAAGTTA 57.913 33.333 0.00 0.00 35.39 2.24
382 383 7.413438 GCACATCATCTTGAGATTTACGAAGTT 60.413 37.037 0.00 0.00 35.39 2.66
383 384 6.036517 GCACATCATCTTGAGATTTACGAAGT 59.963 38.462 0.00 0.00 37.29 3.01
384 385 6.417327 GCACATCATCTTGAGATTTACGAAG 58.583 40.000 0.00 0.00 31.21 3.79
385 386 5.294306 GGCACATCATCTTGAGATTTACGAA 59.706 40.000 0.00 0.00 31.21 3.85
386 387 4.811024 GGCACATCATCTTGAGATTTACGA 59.189 41.667 0.00 0.00 31.21 3.43
387 388 4.318333 CGGCACATCATCTTGAGATTTACG 60.318 45.833 0.00 0.00 31.21 3.18
388 389 4.024556 CCGGCACATCATCTTGAGATTTAC 60.025 45.833 0.00 0.00 31.21 2.01
389 390 4.129380 CCGGCACATCATCTTGAGATTTA 58.871 43.478 0.00 0.00 31.21 1.40
390 391 2.947652 CCGGCACATCATCTTGAGATTT 59.052 45.455 0.00 0.00 31.21 2.17
391 392 2.569059 CCGGCACATCATCTTGAGATT 58.431 47.619 0.00 0.00 31.21 2.40
392 393 1.813092 GCCGGCACATCATCTTGAGAT 60.813 52.381 24.80 0.00 34.56 2.75
393 394 0.462581 GCCGGCACATCATCTTGAGA 60.463 55.000 24.80 0.00 0.00 3.27
394 395 0.463295 AGCCGGCACATCATCTTGAG 60.463 55.000 31.54 0.00 0.00 3.02
395 396 0.462581 GAGCCGGCACATCATCTTGA 60.463 55.000 31.54 0.00 0.00 3.02
396 397 0.745486 TGAGCCGGCACATCATCTTG 60.745 55.000 31.54 0.00 0.00 3.02
397 398 0.463295 CTGAGCCGGCACATCATCTT 60.463 55.000 31.54 3.33 0.00 2.40
398 399 1.145598 CTGAGCCGGCACATCATCT 59.854 57.895 31.54 4.27 0.00 2.90
399 400 1.153289 ACTGAGCCGGCACATCATC 60.153 57.895 31.54 16.99 0.00 2.92
400 401 1.153289 GACTGAGCCGGCACATCAT 60.153 57.895 31.54 16.80 0.00 2.45
401 402 1.830587 AAGACTGAGCCGGCACATCA 61.831 55.000 31.54 22.44 0.00 3.07
402 403 0.674895 AAAGACTGAGCCGGCACATC 60.675 55.000 31.54 24.45 0.00 3.06
403 404 0.674895 GAAAGACTGAGCCGGCACAT 60.675 55.000 31.54 17.99 0.00 3.21
404 405 1.301716 GAAAGACTGAGCCGGCACA 60.302 57.895 31.54 28.20 0.00 4.57
405 406 2.383527 CGAAAGACTGAGCCGGCAC 61.384 63.158 31.54 24.60 0.00 5.01
406 407 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
407 408 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
408 409 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
409 410 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
410 411 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
411 412 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
412 413 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
413 414 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
414 415 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
415 416 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
416 417 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
417 418 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
418 419 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
419 420 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
420 421 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
421 422 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
422 423 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
423 424 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
424 425 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
425 426 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
426 427 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
427 428 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
428 429 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
429 430 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
430 431 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
431 432 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
432 433 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
433 434 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
434 435 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
435 436 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
436 437 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
437 438 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
438 439 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
439 440 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
440 441 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
443 444 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
444 445 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
445 446 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
446 447 0.233590 TTATGAACGCACACACGCAC 59.766 50.000 0.00 0.00 36.19 5.34
447 448 0.510790 CTTATGAACGCACACACGCA 59.489 50.000 0.00 0.00 36.19 5.24
448 449 0.787787 TCTTATGAACGCACACACGC 59.212 50.000 0.00 0.00 36.19 5.34
449 450 2.058798 ACTCTTATGAACGCACACACG 58.941 47.619 0.00 0.00 39.50 4.49
450 451 3.057019 TCACTCTTATGAACGCACACAC 58.943 45.455 0.00 0.00 0.00 3.82
451 452 3.378911 TCACTCTTATGAACGCACACA 57.621 42.857 0.00 0.00 0.00 3.72
452 453 4.152402 ACATTCACTCTTATGAACGCACAC 59.848 41.667 0.00 0.00 41.29 3.82
453 454 4.314961 ACATTCACTCTTATGAACGCACA 58.685 39.130 0.00 0.00 41.29 4.57
454 455 4.928661 ACATTCACTCTTATGAACGCAC 57.071 40.909 0.00 0.00 41.29 5.34
455 456 5.006649 GCATACATTCACTCTTATGAACGCA 59.993 40.000 0.00 0.00 41.29 5.24
456 457 5.435557 GCATACATTCACTCTTATGAACGC 58.564 41.667 0.00 0.00 41.29 4.84
457 458 5.660391 CGCATACATTCACTCTTATGAACG 58.340 41.667 0.00 0.00 41.29 3.95
458 459 5.435557 GCGCATACATTCACTCTTATGAAC 58.564 41.667 0.30 0.00 41.29 3.18
459 460 4.209080 CGCGCATACATTCACTCTTATGAA 59.791 41.667 8.75 0.00 42.62 2.57
460 461 3.735746 CGCGCATACATTCACTCTTATGA 59.264 43.478 8.75 0.00 0.00 2.15
461 462 3.490896 ACGCGCATACATTCACTCTTATG 59.509 43.478 5.73 0.00 0.00 1.90
462 463 3.490896 CACGCGCATACATTCACTCTTAT 59.509 43.478 5.73 0.00 0.00 1.73
463 464 2.857748 CACGCGCATACATTCACTCTTA 59.142 45.455 5.73 0.00 0.00 2.10
464 465 1.660607 CACGCGCATACATTCACTCTT 59.339 47.619 5.73 0.00 0.00 2.85
465 466 1.280982 CACGCGCATACATTCACTCT 58.719 50.000 5.73 0.00 0.00 3.24
466 467 0.999406 ACACGCGCATACATTCACTC 59.001 50.000 5.73 0.00 0.00 3.51
467 468 2.287393 TACACGCGCATACATTCACT 57.713 45.000 5.73 0.00 0.00 3.41
468 469 4.384547 TCATATACACGCGCATACATTCAC 59.615 41.667 5.73 0.00 0.00 3.18
469 470 4.551388 TCATATACACGCGCATACATTCA 58.449 39.130 5.73 0.00 0.00 2.57
470 471 4.490959 GCTCATATACACGCGCATACATTC 60.491 45.833 5.73 0.00 0.00 2.67
471 472 3.367932 GCTCATATACACGCGCATACATT 59.632 43.478 5.73 0.00 0.00 2.71
472 473 2.923655 GCTCATATACACGCGCATACAT 59.076 45.455 5.73 0.00 0.00 2.29
473 474 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
474 475 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
475 476 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
476 477 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
477 478 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
481 482 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
482 483 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
483 484 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
484 485 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
485 486 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
486 487 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
487 488 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
488 489 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
489 490 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
490 491 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
491 492 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
492 493 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
493 494 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
494 495 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
495 496 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
520 521 3.749665 TGCTTGCCAATGCTACTTTTT 57.250 38.095 1.65 0.00 38.71 1.94
521 522 3.749665 TTGCTTGCCAATGCTACTTTT 57.250 38.095 1.65 0.00 38.71 2.27
522 523 3.749665 TTTGCTTGCCAATGCTACTTT 57.250 38.095 1.65 0.00 38.71 2.66
523 524 3.512724 AGATTTGCTTGCCAATGCTACTT 59.487 39.130 0.00 0.00 38.71 2.24
524 525 3.094572 AGATTTGCTTGCCAATGCTACT 58.905 40.909 0.00 0.00 38.71 2.57
525 526 3.515330 AGATTTGCTTGCCAATGCTAC 57.485 42.857 0.00 0.00 38.71 3.58
526 527 4.540359 AAAGATTTGCTTGCCAATGCTA 57.460 36.364 0.00 0.00 36.80 3.49
527 528 3.412237 AAAGATTTGCTTGCCAATGCT 57.588 38.095 0.00 0.00 36.80 3.79
588 589 6.446781 TTGCTTGCCAATGAATTTGAAAAA 57.553 29.167 0.00 0.00 37.53 1.94
589 590 6.446781 TTTGCTTGCCAATGAATTTGAAAA 57.553 29.167 0.00 0.00 37.53 2.29
592 593 5.553123 AGATTTGCTTGCCAATGAATTTGA 58.447 33.333 0.00 0.00 37.53 2.69
593 594 5.873179 AGATTTGCTTGCCAATGAATTTG 57.127 34.783 0.00 0.00 32.49 2.32
595 596 5.873179 CAAGATTTGCTTGCCAATGAATT 57.127 34.783 0.00 0.00 46.67 2.17
733 1990 2.890371 CGAGGAGGTAACGGGTGG 59.110 66.667 0.00 0.00 46.39 4.61
973 2245 4.483243 GGGCGCAGGAATTCCCGA 62.483 66.667 22.53 0.00 40.87 5.14
1062 2334 1.141019 CGTGGACATCCCCGTGTAG 59.859 63.158 0.00 0.00 34.29 2.74
1222 2494 1.180029 GACAGGCAAGGCAATGATGT 58.820 50.000 0.00 0.00 0.00 3.06
1251 2523 3.069443 CCAGGGCAAACAAATAACACACT 59.931 43.478 0.00 0.00 0.00 3.55
1252 2524 3.181470 ACCAGGGCAAACAAATAACACAC 60.181 43.478 0.00 0.00 0.00 3.82
1296 2570 0.108186 TAATCAGGCACCAGCGTCTG 60.108 55.000 0.52 0.52 43.41 3.51
1308 2582 4.916041 TGGGGATCTAAGCATAATCAGG 57.084 45.455 0.00 0.00 0.00 3.86
1325 2599 1.342275 TGGATTTCAGCTGGAATGGGG 60.342 52.381 25.24 0.00 34.91 4.96
1389 2664 0.966179 TCAGCCTAAACTCTGACGCA 59.034 50.000 0.00 0.00 34.69 5.24
1478 2753 6.127758 TGCAGAATAAAAGCAATACCGACATT 60.128 34.615 0.00 0.00 34.97 2.71
1508 2783 4.301628 ACTACAGTGTAACCGTGTAAAGC 58.698 43.478 4.21 0.00 37.80 3.51
1510 2785 5.507817 CCAGACTACAGTGTAACCGTGTAAA 60.508 44.000 4.21 0.00 37.80 2.01
1521 2796 4.411927 AGATGAGAACCAGACTACAGTGT 58.588 43.478 0.00 0.00 0.00 3.55
1610 2885 7.107542 ACCGTATTTGGAAGAATTAACTAGCA 58.892 34.615 0.00 0.00 0.00 3.49
1611 2886 7.549615 ACCGTATTTGGAAGAATTAACTAGC 57.450 36.000 0.00 0.00 0.00 3.42
1630 2905 6.457355 TGACAGAATGCTAACTTTTACCGTA 58.543 36.000 0.00 0.00 42.53 4.02
1644 2919 8.301730 TCTCAAAAATCAAAATGACAGAATGC 57.698 30.769 0.00 0.00 42.53 3.56
1654 2929 7.440255 CCAAGAACAGCTCTCAAAAATCAAAAT 59.560 33.333 0.00 0.00 31.02 1.82
1681 2956 4.959596 ATTGCTCTGCACATACTTGAAG 57.040 40.909 0.00 0.00 38.71 3.02
1717 4211 4.542662 AAATCTTCGGAATCATTGCTCG 57.457 40.909 0.00 0.00 0.00 5.03
1726 4220 8.794335 AGCTTAAGAACTAAAATCTTCGGAAT 57.206 30.769 6.67 0.00 38.13 3.01
1780 4345 9.923143 AGAATAAACTGTTTTGGGCTTATAAAC 57.077 29.630 11.48 0.00 33.50 2.01
1791 4356 5.848036 CAGTCAGCGAGAATAAACTGTTTTG 59.152 40.000 11.48 1.31 31.69 2.44
1802 4367 1.899814 TGGGTAACAGTCAGCGAGAAT 59.100 47.619 0.00 0.00 39.74 2.40
1835 4401 1.379843 CCACCAACCCCTGCCATAC 60.380 63.158 0.00 0.00 0.00 2.39
1910 4476 6.190587 TGAAGATCCACTTGTATCAGAGAGA 58.809 40.000 0.00 0.00 39.13 3.10
1968 4534 3.679389 CTGGGAAACAGCACTGAATACT 58.321 45.455 4.31 0.00 40.97 2.12
2072 4638 6.599244 TGACTTCTGGCTTTTACCTAATGATG 59.401 38.462 0.00 0.00 0.00 3.07
2096 4662 9.790344 ATCTCAAGATTTATCATTAAGGACCTG 57.210 33.333 0.00 0.00 0.00 4.00
2097 4663 9.790344 CATCTCAAGATTTATCATTAAGGACCT 57.210 33.333 0.00 0.00 31.21 3.85
2136 4702 4.201950 ACAGACTTTCACAATTGTCAGCAC 60.202 41.667 8.48 3.94 32.41 4.40
2137 4703 3.947196 ACAGACTTTCACAATTGTCAGCA 59.053 39.130 8.48 0.00 32.41 4.41
2138 4704 4.285292 CACAGACTTTCACAATTGTCAGC 58.715 43.478 8.48 2.50 32.41 4.26
2139 4705 4.336433 ACCACAGACTTTCACAATTGTCAG 59.664 41.667 8.48 7.69 32.41 3.51
2140 4706 4.269183 ACCACAGACTTTCACAATTGTCA 58.731 39.130 8.48 0.00 32.41 3.58
2141 4707 4.335315 TGACCACAGACTTTCACAATTGTC 59.665 41.667 8.48 0.00 0.00 3.18
2142 4708 4.269183 TGACCACAGACTTTCACAATTGT 58.731 39.130 4.92 4.92 0.00 2.71
2148 4714 5.992217 AGTTAGAATGACCACAGACTTTCAC 59.008 40.000 0.00 0.00 0.00 3.18
2151 4717 6.645415 CGTTAGTTAGAATGACCACAGACTTT 59.355 38.462 0.00 0.00 0.00 2.66
2161 4727 7.219535 TGCGAGAAATACGTTAGTTAGAATGAC 59.780 37.037 0.00 0.00 0.00 3.06
2168 4734 4.560035 GCTGTGCGAGAAATACGTTAGTTA 59.440 41.667 0.00 0.00 0.00 2.24
2233 4799 8.522830 CAAAGAACACATCCAAGTATACCAAAT 58.477 33.333 0.00 0.00 0.00 2.32
2412 4978 7.408123 TGCTGCAAGAAAACACAAAAATATTG 58.592 30.769 0.00 0.00 34.07 1.90
2416 4982 6.439675 AATGCTGCAAGAAAACACAAAAAT 57.560 29.167 6.36 0.00 34.07 1.82
2441 5007 5.478233 AGCACGATTGTCGCATAAAATAA 57.522 34.783 9.32 0.00 45.12 1.40
2570 5136 6.850317 GCTAGTTATTCGTAAGTAGAACGGAG 59.150 42.308 12.08 0.00 40.68 4.63
2737 5304 1.674359 TTGCGAACAACCATGTCTGT 58.326 45.000 0.00 0.00 39.40 3.41
2882 5449 7.630082 AGTTACAGAGGGAGTAATAATTTGCA 58.370 34.615 0.00 0.00 34.34 4.08
2931 5498 9.739276 ATAAGATGTTTTTAGAGTCCATGACAA 57.261 29.630 0.00 0.00 34.60 3.18
2951 5518 7.406104 ACTCCCTCTGCAACTTTTTATAAGAT 58.594 34.615 0.00 0.00 0.00 2.40
3249 5816 8.660968 CTTGCAATTAAACAAGTAGACTAAGC 57.339 34.615 0.00 0.00 38.75 3.09
3336 5903 0.397941 AGGCACTTCAGCAAGTAGCA 59.602 50.000 10.94 0.00 41.24 3.49
3359 5927 3.969287 TGTTGAGACAAGATAGCTGCT 57.031 42.857 7.57 7.57 31.49 4.24
3364 5932 6.483307 TGTCCAACTTTGTTGAGACAAGATAG 59.517 38.462 20.93 0.00 45.80 2.08
3371 5939 3.689649 ACTGTGTCCAACTTTGTTGAGAC 59.310 43.478 11.47 14.94 0.00 3.36
3377 5945 6.767524 TTCAATAACTGTGTCCAACTTTGT 57.232 33.333 0.00 0.00 0.00 2.83
3394 5962 7.093333 TGCTCTTTACTCAGACCTCATTCAATA 60.093 37.037 0.00 0.00 0.00 1.90
3417 5985 4.711355 ACATATTTGGGTAACATTGCTGCT 59.289 37.500 0.00 0.00 39.74 4.24
3448 6016 7.519032 AATTCTCTCAAACGGAAAATTGGTA 57.481 32.000 0.00 0.00 0.00 3.25
3459 6027 6.528072 GCTAATCCCAAAAATTCTCTCAAACG 59.472 38.462 0.00 0.00 0.00 3.60
3512 6080 4.553330 TGATAGGTGAGTTCTTGGTTCC 57.447 45.455 0.00 0.00 0.00 3.62
3513 6081 5.734720 TCATGATAGGTGAGTTCTTGGTTC 58.265 41.667 0.00 0.00 0.00 3.62
3522 6090 5.089434 TGGCATAGATCATGATAGGTGAGT 58.911 41.667 8.54 0.00 36.69 3.41
3559 6127 9.090103 TCGATAATTGGATTGTCCTAGACTTAT 57.910 33.333 0.00 0.00 37.46 1.73
3646 6214 0.998928 TGTGTAGCCCCATGGACAAT 59.001 50.000 15.22 0.00 0.00 2.71
3695 6263 4.861102 AAGGCTTGAAACAAGAAGATGG 57.139 40.909 14.44 0.00 0.00 3.51
3746 6346 3.801050 CGTCTGAACTCAAGATGGCATAG 59.199 47.826 0.00 0.00 0.00 2.23
3833 6433 5.100751 ACTCTATACGATAAAACCGACGG 57.899 43.478 13.61 13.61 0.00 4.79
3835 6435 8.338259 TCACTAACTCTATACGATAAAACCGAC 58.662 37.037 0.00 0.00 0.00 4.79
3836 6436 8.338259 GTCACTAACTCTATACGATAAAACCGA 58.662 37.037 0.00 0.00 0.00 4.69
3844 6445 7.013369 TGAGCATTGTCACTAACTCTATACGAT 59.987 37.037 0.00 0.00 0.00 3.73
3879 6480 7.648510 CCTGCAAGCAAGTAGTATTAGTAGTAC 59.351 40.741 2.75 2.75 37.11 2.73
3891 6494 1.446907 CCAGTCCTGCAAGCAAGTAG 58.553 55.000 0.00 0.00 0.00 2.57
4249 6859 1.829533 GAATGCGGACCATGGCCAT 60.830 57.895 14.09 14.09 33.49 4.40
4260 6870 4.818546 ACTGGATAGAATGAAAGAATGCGG 59.181 41.667 0.00 0.00 0.00 5.69
4451 7065 4.037684 ACAGTTACAGATGATAGCCGGTAC 59.962 45.833 1.90 0.00 0.00 3.34
4481 7095 9.852091 CTTCAGATTCTTTCCCTATTTTCAAAG 57.148 33.333 0.00 0.00 0.00 2.77
4538 7152 4.520492 AGAAAATGGTGCGAAGATTCAACT 59.480 37.500 0.00 0.00 0.00 3.16
4548 7162 2.513753 ACCAATGAGAAAATGGTGCGA 58.486 42.857 0.00 0.00 45.47 5.10
4554 7168 5.395682 ACATCACCACCAATGAGAAAATG 57.604 39.130 0.00 0.00 0.00 2.32
4593 7209 0.598065 GAGGCAAACGGAACATTGCT 59.402 50.000 9.95 0.00 45.95 3.91
4600 7216 3.353836 GCAGCGAGGCAAACGGAA 61.354 61.111 0.00 0.00 0.00 4.30
4764 7382 0.172803 CTTCTTGCTCAGCCATTGCC 59.827 55.000 0.00 0.00 38.69 4.52
4765 7383 0.172803 CCTTCTTGCTCAGCCATTGC 59.827 55.000 0.00 0.00 37.95 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.