Multiple sequence alignment - TraesCS3A01G407000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G407000 chr3A 100.000 4083 0 0 1 4083 651995112 651999194 0.000000e+00 7540.0
1 TraesCS3A01G407000 chr3A 91.468 1934 96 28 941 2834 651961956 651963860 0.000000e+00 2593.0
2 TraesCS3A01G407000 chr3A 91.212 1923 107 34 954 2834 651648523 651650425 0.000000e+00 2558.0
3 TraesCS3A01G407000 chr3A 91.160 181 13 3 3591 3768 288535642 288535822 4.080000e-60 243.0
4 TraesCS3A01G407000 chr3B 91.338 1928 96 32 966 2834 680677203 680675288 0.000000e+00 2569.0
5 TraesCS3A01G407000 chr3B 91.093 1931 113 29 954 2834 680733085 680731164 0.000000e+00 2558.0
6 TraesCS3A01G407000 chr3B 93.388 1694 84 11 1393 3067 680477792 680476108 0.000000e+00 2483.0
7 TraesCS3A01G407000 chr3B 86.667 405 22 8 941 1325 680478289 680477897 1.760000e-113 420.0
8 TraesCS3A01G407000 chr3B 89.963 269 11 7 3069 3331 680476071 680475813 2.350000e-87 333.0
9 TraesCS3A01G407000 chr3B 86.391 169 6 2 3352 3503 680475761 680475593 7.020000e-38 169.0
10 TraesCS3A01G407000 chr3B 89.412 85 4 2 4 84 680478366 680478283 7.220000e-18 102.0
11 TraesCS3A01G407000 chr7D 89.589 1777 132 36 1182 2930 502231420 502233171 0.000000e+00 2207.0
12 TraesCS3A01G407000 chr3D 93.423 1490 74 6 1364 2831 516671443 516672930 0.000000e+00 2187.0
13 TraesCS3A01G407000 chr3D 93.309 1091 52 7 1987 3064 516856631 516857713 0.000000e+00 1591.0
14 TraesCS3A01G407000 chr3D 91.845 1030 54 14 945 1954 516855429 516856448 0.000000e+00 1410.0
15 TraesCS3A01G407000 chr3D 88.579 394 32 7 954 1340 516670996 516671383 2.220000e-127 466.0
16 TraesCS3A01G407000 chr3D 87.925 265 17 9 3070 3331 516857922 516858174 8.580000e-77 298.0
17 TraesCS3A01G407000 chr3D 79.675 369 49 12 602 945 8887162 8886795 4.080000e-60 243.0
18 TraesCS3A01G407000 chr3D 78.553 387 56 9 585 945 403108881 403109266 3.170000e-56 230.0
19 TraesCS3A01G407000 chr3D 82.857 175 9 3 3330 3491 516858210 516858376 1.980000e-28 137.0
20 TraesCS3A01G407000 chr3D 97.778 45 1 0 40 84 516855388 516855432 1.220000e-10 78.7
21 TraesCS3A01G407000 chr1D 84.715 772 113 5 2032 2799 360467955 360468725 0.000000e+00 767.0
22 TraesCS3A01G407000 chr2A 81.718 815 112 19 81 865 16615428 16614621 0.000000e+00 645.0
23 TraesCS3A01G407000 chr2A 79.389 917 127 34 81 947 22164697 22163793 1.260000e-164 590.0
24 TraesCS3A01G407000 chr2A 85.885 503 57 9 104 598 723621973 723622469 1.300000e-144 523.0
25 TraesCS3A01G407000 chr2A 82.564 585 70 14 88 648 65817168 65816592 1.710000e-133 486.0
26 TraesCS3A01G407000 chr2A 83.333 384 43 5 585 948 672428532 672428150 6.540000e-88 335.0
27 TraesCS3A01G407000 chr4A 85.147 579 71 10 81 650 376724837 376725409 2.740000e-161 579.0
28 TraesCS3A01G407000 chr4A 87.429 350 34 5 608 947 376725398 376725747 1.060000e-105 394.0
29 TraesCS3A01G407000 chr4A 91.758 182 13 2 3592 3771 13265338 13265157 6.770000e-63 252.0
30 TraesCS3A01G407000 chr2B 80.934 771 95 26 105 865 30476621 30475893 2.760000e-156 562.0
31 TraesCS3A01G407000 chr2B 83.045 578 70 12 81 648 794223288 794222729 2.190000e-137 499.0
32 TraesCS3A01G407000 chr2B 82.792 523 63 11 85 598 683779065 683779569 3.750000e-120 442.0
33 TraesCS3A01G407000 chr7A 78.057 875 126 35 118 945 709340117 709339262 3.670000e-135 492.0
34 TraesCS3A01G407000 chr7A 75.982 891 117 47 85 945 86107195 86108018 1.790000e-98 370.0
35 TraesCS3A01G407000 chr6B 77.455 896 115 41 81 948 632820164 632819328 4.810000e-124 455.0
36 TraesCS3A01G407000 chr6B 77.308 899 110 48 81 948 632824048 632823213 1.040000e-120 444.0
37 TraesCS3A01G407000 chr6B 76.897 896 120 41 81 948 632827929 632827093 1.050000e-115 427.0
38 TraesCS3A01G407000 chr5A 81.921 531 96 0 1405 1935 230453356 230453886 2.240000e-122 449.0
39 TraesCS3A01G407000 chr5A 91.848 184 13 2 3591 3772 101083456 101083273 5.240000e-64 255.0
40 TraesCS3A01G407000 chr1B 77.181 894 117 43 85 945 14822376 14823215 1.350000e-119 440.0
41 TraesCS3A01G407000 chr1B 81.113 593 64 22 85 648 400748342 400748915 8.110000e-117 431.0
42 TraesCS3A01G407000 chr1B 79.793 386 50 14 585 947 484203663 484203283 5.240000e-64 255.0
43 TraesCS3A01G407000 chr1B 91.304 184 14 2 3591 3772 673570565 673570382 2.440000e-62 250.0
44 TraesCS3A01G407000 chr1B 80.110 362 45 9 608 947 484137427 484137071 1.130000e-60 244.0
45 TraesCS3A01G407000 chr6A 82.456 399 46 13 81 463 519224782 519225172 1.090000e-85 327.0
46 TraesCS3A01G407000 chr6A 81.425 393 42 7 585 947 519225201 519225592 3.990000e-75 292.0
47 TraesCS3A01G407000 chr6A 81.013 395 44 6 585 949 604630157 604630550 6.680000e-73 285.0
48 TraesCS3A01G407000 chr6A 91.257 183 15 1 3594 3775 109973770 109973952 8.760000e-62 248.0
49 TraesCS3A01G407000 chr6D 84.078 358 33 13 118 464 60541124 60541468 1.420000e-84 324.0
50 TraesCS3A01G407000 chr6D 91.209 182 14 2 3594 3773 406395385 406395566 3.150000e-61 246.0
51 TraesCS3A01G407000 chr1A 79.400 500 65 7 486 947 524280709 524280210 6.590000e-83 318.0
52 TraesCS3A01G407000 chr5B 92.222 180 12 2 3590 3768 616689942 616690120 1.880000e-63 254.0
53 TraesCS3A01G407000 chr7B 89.691 194 15 4 3591 3781 606591267 606591076 4.080000e-60 243.0
54 TraesCS3A01G407000 chr4D 91.160 181 13 3 3591 3768 35722300 35722480 4.080000e-60 243.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G407000 chr3A 651995112 651999194 4082 False 7540.00 7540 100.0000 1 4083 1 chr3A.!!$F4 4082
1 TraesCS3A01G407000 chr3A 651961956 651963860 1904 False 2593.00 2593 91.4680 941 2834 1 chr3A.!!$F3 1893
2 TraesCS3A01G407000 chr3A 651648523 651650425 1902 False 2558.00 2558 91.2120 954 2834 1 chr3A.!!$F2 1880
3 TraesCS3A01G407000 chr3B 680675288 680677203 1915 True 2569.00 2569 91.3380 966 2834 1 chr3B.!!$R1 1868
4 TraesCS3A01G407000 chr3B 680731164 680733085 1921 True 2558.00 2558 91.0930 954 2834 1 chr3B.!!$R2 1880
5 TraesCS3A01G407000 chr3B 680475593 680478366 2773 True 701.40 2483 89.1642 4 3503 5 chr3B.!!$R3 3499
6 TraesCS3A01G407000 chr7D 502231420 502233171 1751 False 2207.00 2207 89.5890 1182 2930 1 chr7D.!!$F1 1748
7 TraesCS3A01G407000 chr3D 516670996 516672930 1934 False 1326.50 2187 91.0010 954 2831 2 chr3D.!!$F2 1877
8 TraesCS3A01G407000 chr3D 516855388 516858376 2988 False 702.94 1591 90.7428 40 3491 5 chr3D.!!$F3 3451
9 TraesCS3A01G407000 chr1D 360467955 360468725 770 False 767.00 767 84.7150 2032 2799 1 chr1D.!!$F1 767
10 TraesCS3A01G407000 chr2A 16614621 16615428 807 True 645.00 645 81.7180 81 865 1 chr2A.!!$R1 784
11 TraesCS3A01G407000 chr2A 22163793 22164697 904 True 590.00 590 79.3890 81 947 1 chr2A.!!$R2 866
12 TraesCS3A01G407000 chr2A 65816592 65817168 576 True 486.00 486 82.5640 88 648 1 chr2A.!!$R3 560
13 TraesCS3A01G407000 chr4A 376724837 376725747 910 False 486.50 579 86.2880 81 947 2 chr4A.!!$F1 866
14 TraesCS3A01G407000 chr2B 30475893 30476621 728 True 562.00 562 80.9340 105 865 1 chr2B.!!$R1 760
15 TraesCS3A01G407000 chr2B 794222729 794223288 559 True 499.00 499 83.0450 81 648 1 chr2B.!!$R2 567
16 TraesCS3A01G407000 chr2B 683779065 683779569 504 False 442.00 442 82.7920 85 598 1 chr2B.!!$F1 513
17 TraesCS3A01G407000 chr7A 709339262 709340117 855 True 492.00 492 78.0570 118 945 1 chr7A.!!$R1 827
18 TraesCS3A01G407000 chr7A 86107195 86108018 823 False 370.00 370 75.9820 85 945 1 chr7A.!!$F1 860
19 TraesCS3A01G407000 chr6B 632819328 632827929 8601 True 442.00 455 77.2200 81 948 3 chr6B.!!$R1 867
20 TraesCS3A01G407000 chr5A 230453356 230453886 530 False 449.00 449 81.9210 1405 1935 1 chr5A.!!$F1 530
21 TraesCS3A01G407000 chr1B 14822376 14823215 839 False 440.00 440 77.1810 85 945 1 chr1B.!!$F1 860
22 TraesCS3A01G407000 chr1B 400748342 400748915 573 False 431.00 431 81.1130 85 648 1 chr1B.!!$F2 563
23 TraesCS3A01G407000 chr6A 519224782 519225592 810 False 309.50 327 81.9405 81 947 2 chr6A.!!$F3 866

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
86 90 0.320421 GCCGGCACTCACTTTACAGA 60.320 55.0 24.80 0.00 0.0 3.41 F
1350 5678 0.099259 TCGGCTTATGGTGTACGACG 59.901 55.0 0.00 0.00 0.0 5.12 F
1351 5679 0.179156 CGGCTTATGGTGTACGACGT 60.179 55.0 5.52 5.52 0.0 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1387 5781 0.178068 GCCTGTACACATCGGGACAT 59.822 55.000 2.39 0.0 33.49 3.06 R
2871 9235 1.246737 GCTTTCACCCTCCAGCCAAG 61.247 60.000 0.00 0.0 0.00 3.61 R
3348 9965 1.341531 ACGAACCCACTCAAGAGTCAG 59.658 52.381 0.00 0.0 40.20 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 87 2.038837 GGGCCGGCACTCACTTTAC 61.039 63.158 30.85 6.06 0.00 2.01
86 90 0.320421 GCCGGCACTCACTTTACAGA 60.320 55.000 24.80 0.00 0.00 3.41
97 101 7.467267 GCACTCACTTTACAGAATCTTCAACAA 60.467 37.037 0.00 0.00 0.00 2.83
102 106 6.038271 ACTTTACAGAATCTTCAACAAACGCT 59.962 34.615 0.00 0.00 0.00 5.07
103 107 7.225931 ACTTTACAGAATCTTCAACAAACGCTA 59.774 33.333 0.00 0.00 0.00 4.26
156 161 7.985476 ACAGCGTCATTTTAGTAATTTAGCAT 58.015 30.769 0.00 0.00 0.00 3.79
170 176 0.467844 TAGCATGCCATGGCCGATTT 60.468 50.000 33.44 17.18 41.09 2.17
174 180 1.682854 CATGCCATGGCCGATTTAGTT 59.317 47.619 33.44 4.50 41.09 2.24
179 185 1.003545 CATGGCCGATTTAGTTCAGCG 60.004 52.381 0.00 0.00 0.00 5.18
182 188 1.583054 GCCGATTTAGTTCAGCGGAT 58.417 50.000 0.00 0.00 44.43 4.18
184 190 1.867233 CCGATTTAGTTCAGCGGATGG 59.133 52.381 0.00 0.00 44.43 3.51
196 202 6.601613 AGTTCAGCGGATGGACAAAAATATAA 59.398 34.615 7.52 0.00 40.27 0.98
198 204 5.298276 TCAGCGGATGGACAAAAATATAACC 59.702 40.000 0.00 0.00 0.00 2.85
200 206 4.273969 GCGGATGGACAAAAATATAACCGA 59.726 41.667 0.00 0.00 39.11 4.69
212 218 5.801531 AATATAACCGATAGTGGACAGCA 57.198 39.130 0.00 0.00 0.00 4.41
333 4227 2.560981 CAAAAACGCAATTAGGTCCCCT 59.439 45.455 0.00 0.00 37.71 4.79
348 4242 1.992557 TCCCCTATTGTTGGAGCAAGT 59.007 47.619 0.00 0.00 0.00 3.16
369 4272 5.669477 AGTTAGCTTGCAAACCATTTTTCA 58.331 33.333 0.00 0.00 0.00 2.69
395 4299 3.181967 CGCACGCGAGCTAGCTTT 61.182 61.111 25.38 0.00 42.83 3.51
396 4300 2.397252 GCACGCGAGCTAGCTTTG 59.603 61.111 20.42 15.65 34.40 2.77
423 4358 3.191669 TCGTTGAATCACAAACACGAGT 58.808 40.909 3.35 0.00 40.36 4.18
591 4556 3.591254 GAAGGGCAACGACGGCTCT 62.591 63.158 0.00 0.00 46.05 4.09
606 4624 1.289066 CTCTCGGCCGTCAAACTCA 59.711 57.895 27.15 1.04 0.00 3.41
726 4770 1.851065 TACAGGGAATGGCTGCAGCA 61.851 55.000 37.63 24.48 44.36 4.41
745 4789 3.443925 CGAGCTCGAGGCAGGACA 61.444 66.667 32.06 0.00 44.79 4.02
759 4813 1.376553 GGACAAGCAGAGGGAGCAC 60.377 63.158 0.00 0.00 0.00 4.40
789 4851 1.896339 CTTCGCGCGTCATTGTCCAA 61.896 55.000 30.98 12.16 0.00 3.53
796 4858 1.348538 CGTCATTGTCCAACGCGCTA 61.349 55.000 5.73 0.00 0.00 4.26
809 4871 2.655364 CGCTATACGCTGCGCACT 60.655 61.111 23.51 9.37 45.50 4.40
830 4892 2.715532 AATATCCCGCGTGCGATGCT 62.716 55.000 16.91 0.74 42.83 3.79
839 4901 0.447406 CGTGCGATGCTGAAATTCCA 59.553 50.000 0.00 0.00 0.00 3.53
925 5004 1.083489 AGCGCGCACTATTTTTAGCA 58.917 45.000 35.10 0.00 0.00 3.49
948 5027 3.196469 CCTCTGTTGGAGATGCTCTTACA 59.804 47.826 0.00 0.00 44.45 2.41
960 5039 1.879796 GCTCTTACACAGTGCAGGCTT 60.880 52.381 0.00 0.00 41.05 4.35
1157 5264 0.814410 CCGCACGCCTACTCTCTCTA 60.814 60.000 0.00 0.00 0.00 2.43
1178 5286 0.107831 TCTGTTGGCGGCAGTTAAGT 59.892 50.000 12.87 0.00 35.60 2.24
1348 5676 1.135527 CCTTCGGCTTATGGTGTACGA 59.864 52.381 0.00 0.00 0.00 3.43
1349 5677 2.190981 CTTCGGCTTATGGTGTACGAC 58.809 52.381 0.00 0.00 0.00 4.34
1350 5678 0.099259 TCGGCTTATGGTGTACGACG 59.901 55.000 0.00 0.00 0.00 5.12
1351 5679 0.179156 CGGCTTATGGTGTACGACGT 60.179 55.000 5.52 5.52 0.00 4.34
1352 5680 1.063912 CGGCTTATGGTGTACGACGTA 59.936 52.381 2.97 2.97 0.00 3.57
1353 5681 2.454055 GGCTTATGGTGTACGACGTAC 58.546 52.381 27.22 27.22 39.24 3.67
1356 5684 4.023707 GGCTTATGGTGTACGACGTACTAT 60.024 45.833 31.68 24.66 39.49 2.12
1358 5686 6.128172 GGCTTATGGTGTACGACGTACTATAT 60.128 42.308 31.68 24.12 39.49 0.86
1360 5688 7.360353 GCTTATGGTGTACGACGTACTATATCA 60.360 40.741 31.68 21.44 39.49 2.15
1378 5772 9.241919 ACTATATCATATGTTGGTCTCTCTGAG 57.758 37.037 1.90 0.00 0.00 3.35
1381 5775 5.514169 TCATATGTTGGTCTCTCTGAGTCT 58.486 41.667 4.32 0.00 0.00 3.24
1382 5776 5.359292 TCATATGTTGGTCTCTCTGAGTCTG 59.641 44.000 4.32 0.00 0.00 3.51
1383 5777 3.229697 TGTTGGTCTCTCTGAGTCTGA 57.770 47.619 4.32 0.00 0.00 3.27
1384 5778 3.772387 TGTTGGTCTCTCTGAGTCTGAT 58.228 45.455 4.32 0.00 0.00 2.90
1385 5779 3.509184 TGTTGGTCTCTCTGAGTCTGATG 59.491 47.826 4.32 0.00 0.00 3.07
1386 5780 3.728385 TGGTCTCTCTGAGTCTGATGA 57.272 47.619 4.32 0.33 0.00 2.92
1387 5781 4.039603 TGGTCTCTCTGAGTCTGATGAA 57.960 45.455 4.32 0.00 0.00 2.57
1388 5782 4.608269 TGGTCTCTCTGAGTCTGATGAAT 58.392 43.478 4.32 0.00 0.00 2.57
1389 5783 4.401837 TGGTCTCTCTGAGTCTGATGAATG 59.598 45.833 4.32 0.00 0.00 2.67
1391 5785 5.450412 GGTCTCTCTGAGTCTGATGAATGTC 60.450 48.000 4.32 0.00 0.00 3.06
1401 5802 3.704061 TCTGATGAATGTCCCGATGTGTA 59.296 43.478 0.00 0.00 0.00 2.90
1847 6248 4.541705 CTCAGGTCTTCTTCTCCCAGATA 58.458 47.826 0.00 0.00 0.00 1.98
1853 6254 3.117093 TCTTCTTCTCCCAGATACCCGAT 60.117 47.826 0.00 0.00 0.00 4.18
1966 6535 1.538950 AGGTAGGTGACTCGACGAAAC 59.461 52.381 0.00 0.00 43.67 2.78
1991 6567 4.842531 TCCCTAGATCATGTTGAGCAAA 57.157 40.909 0.00 0.00 34.77 3.68
2063 6639 1.452651 CCTGACCGGCATCAGCATT 60.453 57.895 15.04 0.00 44.12 3.56
2871 9235 0.320160 AGCGTCCGGTAAAGTTCACC 60.320 55.000 0.00 0.00 0.00 4.02
2971 9336 1.738030 GCTAATGACCGCCGTAGTTGT 60.738 52.381 0.00 0.00 0.00 3.32
2993 9364 9.274206 GTTGTCTCAAAGAAAAGATACCTAAGT 57.726 33.333 0.00 0.00 0.00 2.24
2994 9365 8.833231 TGTCTCAAAGAAAAGATACCTAAGTG 57.167 34.615 0.00 0.00 0.00 3.16
2995 9366 8.647796 TGTCTCAAAGAAAAGATACCTAAGTGA 58.352 33.333 0.00 0.00 0.00 3.41
2996 9367 8.927721 GTCTCAAAGAAAAGATACCTAAGTGAC 58.072 37.037 0.00 0.00 0.00 3.67
3031 9402 5.297547 TGAGTGTCACCAACTAATGTTCTC 58.702 41.667 0.00 0.00 33.52 2.87
3077 9651 9.931210 AGCTAATTTAATAATAACGTCTGTTGC 57.069 29.630 0.00 0.00 39.12 4.17
3096 9670 1.680651 CACCCTGAGCTCGGACTCT 60.681 63.158 24.60 0.00 37.58 3.24
3097 9671 1.379309 ACCCTGAGCTCGGACTCTC 60.379 63.158 24.60 0.00 37.58 3.20
3118 9692 4.800784 TCTGTGTCATGCATGTTCAAATG 58.199 39.130 25.43 16.63 0.00 2.32
3127 9701 3.384146 TGCATGTTCAAATGACACCAACT 59.616 39.130 0.00 0.00 0.00 3.16
3128 9702 3.737266 GCATGTTCAAATGACACCAACTG 59.263 43.478 0.00 0.00 0.00 3.16
3129 9703 4.499526 GCATGTTCAAATGACACCAACTGA 60.500 41.667 0.00 0.00 0.00 3.41
3131 9705 3.380004 TGTTCAAATGACACCAACTGACC 59.620 43.478 0.00 0.00 0.00 4.02
3132 9706 3.289407 TCAAATGACACCAACTGACCA 57.711 42.857 0.00 0.00 0.00 4.02
3133 9707 3.625853 TCAAATGACACCAACTGACCAA 58.374 40.909 0.00 0.00 0.00 3.67
3134 9708 3.380004 TCAAATGACACCAACTGACCAAC 59.620 43.478 0.00 0.00 0.00 3.77
3135 9709 2.727123 ATGACACCAACTGACCAACA 57.273 45.000 0.00 0.00 0.00 3.33
3136 9710 2.727123 TGACACCAACTGACCAACAT 57.273 45.000 0.00 0.00 0.00 2.71
3137 9711 2.296792 TGACACCAACTGACCAACATG 58.703 47.619 0.00 0.00 0.00 3.21
3138 9712 1.608590 GACACCAACTGACCAACATGG 59.391 52.381 0.00 0.00 45.02 3.66
3139 9713 1.214175 ACACCAACTGACCAACATGGA 59.786 47.619 2.85 0.00 40.96 3.41
3345 9962 2.649034 GGCCAAGTCTCGTCGACA 59.351 61.111 17.16 1.87 45.32 4.35
3346 9963 1.733399 GGCCAAGTCTCGTCGACAC 60.733 63.158 17.16 6.38 45.32 3.67
3347 9964 1.286260 GCCAAGTCTCGTCGACACT 59.714 57.895 17.16 8.83 45.32 3.55
3348 9965 0.729816 GCCAAGTCTCGTCGACACTC 60.730 60.000 17.16 2.76 45.32 3.51
3350 9967 1.400371 CCAAGTCTCGTCGACACTCTG 60.400 57.143 17.16 11.51 45.32 3.35
3441 10140 4.920112 TGGTTGGTGCCGACGGTG 62.920 66.667 16.73 0.00 0.00 4.94
3474 10173 2.084546 GCGTACAAAGGGAGCAAGAAT 58.915 47.619 0.00 0.00 0.00 2.40
3504 10203 9.674824 ACGATTAAAATACGTAGAGGAATACAG 57.325 33.333 0.08 0.00 38.47 2.74
3505 10204 9.125906 CGATTAAAATACGTAGAGGAATACAGG 57.874 37.037 0.08 0.00 0.00 4.00
3507 10206 9.978044 ATTAAAATACGTAGAGGAATACAGGTC 57.022 33.333 0.08 0.00 0.00 3.85
3508 10207 7.414222 AAAATACGTAGAGGAATACAGGTCA 57.586 36.000 0.08 0.00 0.00 4.02
3509 10208 6.636562 AATACGTAGAGGAATACAGGTCAG 57.363 41.667 0.08 0.00 0.00 3.51
3510 10209 3.288964 ACGTAGAGGAATACAGGTCAGG 58.711 50.000 0.00 0.00 0.00 3.86
3511 10210 2.034812 CGTAGAGGAATACAGGTCAGGC 59.965 54.545 0.00 0.00 0.00 4.85
3512 10211 2.254152 AGAGGAATACAGGTCAGGCA 57.746 50.000 0.00 0.00 0.00 4.75
3513 10212 2.769209 AGAGGAATACAGGTCAGGCAT 58.231 47.619 0.00 0.00 0.00 4.40
3515 10214 3.900601 AGAGGAATACAGGTCAGGCATAG 59.099 47.826 0.00 0.00 0.00 2.23
3516 10215 2.370189 AGGAATACAGGTCAGGCATAGC 59.630 50.000 0.00 0.00 0.00 2.97
3518 10217 2.918712 ATACAGGTCAGGCATAGCAC 57.081 50.000 0.00 0.00 0.00 4.40
3519 10218 1.567357 TACAGGTCAGGCATAGCACA 58.433 50.000 0.00 0.00 0.00 4.57
3520 10219 0.251354 ACAGGTCAGGCATAGCACAG 59.749 55.000 0.00 0.00 0.00 3.66
3521 10220 0.251354 CAGGTCAGGCATAGCACAGT 59.749 55.000 0.00 0.00 0.00 3.55
3522 10221 0.987294 AGGTCAGGCATAGCACAGTT 59.013 50.000 0.00 0.00 0.00 3.16
3524 10223 2.571653 AGGTCAGGCATAGCACAGTTTA 59.428 45.455 0.00 0.00 0.00 2.01
3525 10224 3.200825 AGGTCAGGCATAGCACAGTTTAT 59.799 43.478 0.00 0.00 0.00 1.40
3526 10225 3.313526 GGTCAGGCATAGCACAGTTTATG 59.686 47.826 0.00 0.00 0.00 1.90
3528 10227 4.396166 GTCAGGCATAGCACAGTTTATGTT 59.604 41.667 0.00 0.00 41.41 2.71
3529 10228 5.009631 TCAGGCATAGCACAGTTTATGTTT 58.990 37.500 0.00 0.00 41.41 2.83
3531 10230 4.094887 AGGCATAGCACAGTTTATGTTTCG 59.905 41.667 0.00 0.00 41.41 3.46
3534 10233 5.508224 GCATAGCACAGTTTATGTTTCGTTC 59.492 40.000 0.00 0.00 41.41 3.95
3535 10234 4.483476 AGCACAGTTTATGTTTCGTTCC 57.517 40.909 0.00 0.00 41.41 3.62
3536 10235 4.134563 AGCACAGTTTATGTTTCGTTCCT 58.865 39.130 0.00 0.00 41.41 3.36
3537 10236 4.578928 AGCACAGTTTATGTTTCGTTCCTT 59.421 37.500 0.00 0.00 41.41 3.36
3539 10238 4.675114 CACAGTTTATGTTTCGTTCCTTGC 59.325 41.667 0.00 0.00 41.41 4.01
3540 10239 4.226761 CAGTTTATGTTTCGTTCCTTGCC 58.773 43.478 0.00 0.00 0.00 4.52
3542 10241 3.907894 TTATGTTTCGTTCCTTGCCAC 57.092 42.857 0.00 0.00 0.00 5.01
3546 10245 1.880027 GTTTCGTTCCTTGCCACATCT 59.120 47.619 0.00 0.00 0.00 2.90
3547 10246 1.808411 TTCGTTCCTTGCCACATCTC 58.192 50.000 0.00 0.00 0.00 2.75
3548 10247 0.684535 TCGTTCCTTGCCACATCTCA 59.315 50.000 0.00 0.00 0.00 3.27
3549 10248 1.071542 TCGTTCCTTGCCACATCTCAA 59.928 47.619 0.00 0.00 0.00 3.02
3551 10250 2.489329 CGTTCCTTGCCACATCTCAATT 59.511 45.455 0.00 0.00 0.00 2.32
3552 10251 3.057315 CGTTCCTTGCCACATCTCAATTT 60.057 43.478 0.00 0.00 0.00 1.82
3553 10252 4.155826 CGTTCCTTGCCACATCTCAATTTA 59.844 41.667 0.00 0.00 0.00 1.40
3554 10253 5.644644 GTTCCTTGCCACATCTCAATTTAG 58.355 41.667 0.00 0.00 0.00 1.85
3556 10255 5.188434 TCCTTGCCACATCTCAATTTAGAG 58.812 41.667 0.00 0.00 36.97 2.43
3557 10256 4.201990 CCTTGCCACATCTCAATTTAGAGC 60.202 45.833 0.00 0.00 35.59 4.09
3559 10258 4.529897 TGCCACATCTCAATTTAGAGCAT 58.470 39.130 0.00 0.00 35.59 3.79
3560 10259 4.951715 TGCCACATCTCAATTTAGAGCATT 59.048 37.500 0.00 0.00 35.59 3.56
3561 10260 5.419788 TGCCACATCTCAATTTAGAGCATTT 59.580 36.000 0.00 0.00 35.59 2.32
3562 10261 5.975939 GCCACATCTCAATTTAGAGCATTTC 59.024 40.000 0.00 0.00 35.59 2.17
3563 10262 6.501781 CCACATCTCAATTTAGAGCATTTCC 58.498 40.000 0.00 0.00 35.59 3.13
3565 10264 7.194278 CACATCTCAATTTAGAGCATTTCCAG 58.806 38.462 0.00 0.00 35.59 3.86
3566 10265 5.824904 TCTCAATTTAGAGCATTTCCAGC 57.175 39.130 0.00 0.00 35.59 4.85
3567 10266 5.255687 TCTCAATTTAGAGCATTTCCAGCA 58.744 37.500 0.00 0.00 35.59 4.41
3568 10267 5.356190 TCTCAATTTAGAGCATTTCCAGCAG 59.644 40.000 0.00 0.00 35.59 4.24
3569 10268 4.110482 CAATTTAGAGCATTTCCAGCAGC 58.890 43.478 0.00 0.00 0.00 5.25
3572 10271 1.461559 AGAGCATTTCCAGCAGCTTC 58.538 50.000 0.00 0.00 37.48 3.86
3573 10272 1.171308 GAGCATTTCCAGCAGCTTCA 58.829 50.000 0.00 0.00 37.48 3.02
3574 10273 1.749634 GAGCATTTCCAGCAGCTTCAT 59.250 47.619 0.00 0.00 37.48 2.57
3575 10274 2.947652 GAGCATTTCCAGCAGCTTCATA 59.052 45.455 0.00 0.00 37.48 2.15
3576 10275 3.359033 AGCATTTCCAGCAGCTTCATAA 58.641 40.909 0.00 0.00 32.52 1.90
3577 10276 3.765511 AGCATTTCCAGCAGCTTCATAAA 59.234 39.130 0.00 0.00 32.52 1.40
3578 10277 4.221262 AGCATTTCCAGCAGCTTCATAAAA 59.779 37.500 0.00 0.00 32.52 1.52
3579 10278 5.105064 AGCATTTCCAGCAGCTTCATAAAAT 60.105 36.000 0.00 0.00 32.52 1.82
3580 10279 5.583457 GCATTTCCAGCAGCTTCATAAAATT 59.417 36.000 0.00 0.00 0.00 1.82
3581 10280 6.093082 GCATTTCCAGCAGCTTCATAAAATTT 59.907 34.615 0.00 0.00 0.00 1.82
3582 10281 7.675637 GCATTTCCAGCAGCTTCATAAAATTTC 60.676 37.037 0.00 0.00 0.00 2.17
3584 10283 6.594788 TCCAGCAGCTTCATAAAATTTCTT 57.405 33.333 0.00 0.00 0.00 2.52
3587 10286 7.599998 TCCAGCAGCTTCATAAAATTTCTTTTC 59.400 33.333 0.00 0.00 36.09 2.29
3589 10288 7.115378 CAGCAGCTTCATAAAATTTCTTTTCGT 59.885 33.333 0.00 0.00 36.09 3.85
3590 10289 8.296713 AGCAGCTTCATAAAATTTCTTTTCGTA 58.703 29.630 0.00 0.00 36.09 3.43
3591 10290 8.911662 GCAGCTTCATAAAATTTCTTTTCGTAA 58.088 29.630 0.00 0.00 36.09 3.18
3601 10300 9.647797 AAAATTTCTTTTCGTAAAGGTCTGTTT 57.352 25.926 13.67 6.52 40.93 2.83
3603 10302 9.946165 AATTTCTTTTCGTAAAGGTCTGTTTAG 57.054 29.630 13.67 0.00 40.93 1.85
3604 10303 8.721019 TTTCTTTTCGTAAAGGTCTGTTTAGA 57.279 30.769 13.67 0.00 40.93 2.10
3605 10304 8.721019 TTCTTTTCGTAAAGGTCTGTTTAGAA 57.279 30.769 13.67 0.00 40.93 2.10
3607 10306 7.765360 TCTTTTCGTAAAGGTCTGTTTAGAACA 59.235 33.333 13.67 0.00 43.35 3.18
3608 10307 6.833342 TTCGTAAAGGTCTGTTTAGAACAC 57.167 37.500 0.00 0.00 43.35 3.32
3609 10308 5.904941 TCGTAAAGGTCTGTTTAGAACACA 58.095 37.500 0.00 0.00 43.35 3.72
3610 10309 6.518493 TCGTAAAGGTCTGTTTAGAACACAT 58.482 36.000 0.00 0.00 43.35 3.21
3611 10310 6.643770 TCGTAAAGGTCTGTTTAGAACACATC 59.356 38.462 0.00 0.00 43.35 3.06
3612 10311 6.645415 CGTAAAGGTCTGTTTAGAACACATCT 59.355 38.462 0.00 0.00 43.35 2.90
3614 10313 9.141400 GTAAAGGTCTGTTTAGAACACATCTAG 57.859 37.037 0.00 0.00 43.35 2.43
3615 10314 7.540474 AAGGTCTGTTTAGAACACATCTAGA 57.460 36.000 0.00 0.00 43.35 2.43
3616 10315 7.726033 AGGTCTGTTTAGAACACATCTAGAT 57.274 36.000 0.00 0.00 43.35 1.98
3617 10316 8.824756 AGGTCTGTTTAGAACACATCTAGATA 57.175 34.615 4.54 0.00 43.35 1.98
3618 10317 9.427821 AGGTCTGTTTAGAACACATCTAGATAT 57.572 33.333 4.54 0.00 43.35 1.63
3654 10353 8.087982 TGTCACATCTAAACTGATTTTCACTC 57.912 34.615 0.00 0.00 0.00 3.51
3655 10354 7.933577 TGTCACATCTAAACTGATTTTCACTCT 59.066 33.333 0.00 0.00 0.00 3.24
3656 10355 8.226448 GTCACATCTAAACTGATTTTCACTCTG 58.774 37.037 0.00 0.00 0.00 3.35
3659 10358 9.125026 ACATCTAAACTGATTTTCACTCTGTTT 57.875 29.630 11.33 11.33 43.11 2.83
3660 10359 9.390795 CATCTAAACTGATTTTCACTCTGTTTG 57.609 33.333 14.59 7.92 41.71 2.93
3661 10360 8.506168 TCTAAACTGATTTTCACTCTGTTTGT 57.494 30.769 14.59 0.00 41.71 2.83
3662 10361 8.397906 TCTAAACTGATTTTCACTCTGTTTGTG 58.602 33.333 14.59 9.55 41.71 3.33
3663 10362 5.505173 ACTGATTTTCACTCTGTTTGTGG 57.495 39.130 0.00 0.00 36.21 4.17
3666 10365 5.192927 TGATTTTCACTCTGTTTGTGGTCT 58.807 37.500 0.00 0.00 36.21 3.85
3667 10366 6.353323 TGATTTTCACTCTGTTTGTGGTCTA 58.647 36.000 0.00 0.00 36.21 2.59
3668 10367 6.998074 TGATTTTCACTCTGTTTGTGGTCTAT 59.002 34.615 0.00 0.00 36.21 1.98
3670 10369 7.639113 TTTTCACTCTGTTTGTGGTCTATTT 57.361 32.000 0.00 0.00 36.21 1.40
3671 10370 7.639113 TTTCACTCTGTTTGTGGTCTATTTT 57.361 32.000 0.00 0.00 36.21 1.82
3672 10371 7.639113 TTCACTCTGTTTGTGGTCTATTTTT 57.361 32.000 0.00 0.00 36.21 1.94
3721 10420 6.824305 ACTGCATTATATATTTGTGGGAGC 57.176 37.500 0.00 0.00 0.00 4.70
3722 10421 6.546484 ACTGCATTATATATTTGTGGGAGCT 58.454 36.000 0.00 0.00 0.00 4.09
3723 10422 7.006509 ACTGCATTATATATTTGTGGGAGCTT 58.993 34.615 0.00 0.00 0.00 3.74
3725 10424 8.565896 TGCATTATATATTTGTGGGAGCTTAG 57.434 34.615 0.00 0.00 0.00 2.18
3727 10426 9.401058 GCATTATATATTTGTGGGAGCTTAGAT 57.599 33.333 0.00 0.00 0.00 1.98
3730 10429 9.725019 TTATATATTTGTGGGAGCTTAGATGTG 57.275 33.333 0.00 0.00 0.00 3.21
3731 10430 2.787473 TTGTGGGAGCTTAGATGTGG 57.213 50.000 0.00 0.00 0.00 4.17
3733 10432 0.253044 GTGGGAGCTTAGATGTGGCA 59.747 55.000 0.00 0.00 0.00 4.92
3734 10433 1.133976 GTGGGAGCTTAGATGTGGCAT 60.134 52.381 0.00 0.00 0.00 4.40
3735 10434 1.565759 TGGGAGCTTAGATGTGGCATT 59.434 47.619 0.00 0.00 0.00 3.56
3736 10435 2.225467 GGGAGCTTAGATGTGGCATTC 58.775 52.381 0.00 0.00 0.00 2.67
3738 10437 2.158696 GGAGCTTAGATGTGGCATTCCT 60.159 50.000 0.00 0.00 0.00 3.36
3739 10438 3.071602 GGAGCTTAGATGTGGCATTCCTA 59.928 47.826 0.00 0.00 0.00 2.94
3740 10439 4.444876 GGAGCTTAGATGTGGCATTCCTAA 60.445 45.833 0.00 0.00 0.00 2.69
3743 10442 5.951747 AGCTTAGATGTGGCATTCCTAAAAA 59.048 36.000 0.00 0.00 0.00 1.94
3776 10475 6.627395 TGTGAATTAGACAAATTGTTCCGT 57.373 33.333 0.00 0.00 37.93 4.69
3777 10476 7.731882 TGTGAATTAGACAAATTGTTCCGTA 57.268 32.000 0.00 0.00 37.93 4.02
3778 10477 8.155821 TGTGAATTAGACAAATTGTTCCGTAA 57.844 30.769 0.00 0.00 37.93 3.18
3779 10478 8.622157 TGTGAATTAGACAAATTGTTCCGTAAA 58.378 29.630 0.00 0.00 37.93 2.01
3780 10479 9.453325 GTGAATTAGACAAATTGTTCCGTAAAA 57.547 29.630 0.00 0.00 37.93 1.52
3781 10480 9.672086 TGAATTAGACAAATTGTTCCGTAAAAG 57.328 29.630 0.00 0.00 37.93 2.27
3782 10481 9.673454 GAATTAGACAAATTGTTCCGTAAAAGT 57.327 29.630 0.00 0.00 37.93 2.66
3785 10484 5.358725 AGACAAATTGTTCCGTAAAAGTGGT 59.641 36.000 0.00 0.00 0.00 4.16
3786 10485 5.968254 ACAAATTGTTCCGTAAAAGTGGTT 58.032 33.333 0.00 0.00 0.00 3.67
3787 10486 6.399743 ACAAATTGTTCCGTAAAAGTGGTTT 58.600 32.000 0.00 0.00 0.00 3.27
3788 10487 6.874664 ACAAATTGTTCCGTAAAAGTGGTTTT 59.125 30.769 0.00 0.00 39.31 2.43
3789 10488 8.033626 ACAAATTGTTCCGTAAAAGTGGTTTTA 58.966 29.630 0.00 0.00 37.12 1.52
3801 10500 6.375945 AAAGTGGTTTTACGAAATAACCGT 57.624 33.333 0.00 0.00 43.34 4.83
3802 10501 7.489574 AAAGTGGTTTTACGAAATAACCGTA 57.510 32.000 0.00 0.00 43.34 4.02
3803 10502 7.489574 AAGTGGTTTTACGAAATAACCGTAA 57.510 32.000 0.00 0.00 46.58 3.18
3815 10514 7.392953 ACGAAATAACCGTAAAATTTAGGGGAA 59.607 33.333 23.28 13.75 38.61 3.97
3817 10516 8.654485 AAATAACCGTAAAATTTAGGGGAAGT 57.346 30.769 23.28 10.87 0.00 3.01
3818 10517 8.654485 AATAACCGTAAAATTTAGGGGAAGTT 57.346 30.769 23.28 13.48 0.00 2.66
3820 10519 5.633117 ACCGTAAAATTTAGGGGAAGTTGA 58.367 37.500 23.28 0.00 0.00 3.18
3821 10520 5.474532 ACCGTAAAATTTAGGGGAAGTTGAC 59.525 40.000 23.28 0.00 0.00 3.18
3822 10521 5.391203 CCGTAAAATTTAGGGGAAGTTGACG 60.391 44.000 14.75 1.86 39.74 4.35
3824 10523 2.801077 ATTTAGGGGAAGTTGACGGG 57.199 50.000 0.00 0.00 0.00 5.28
3826 10525 0.688487 TTAGGGGAAGTTGACGGGTG 59.312 55.000 0.00 0.00 0.00 4.61
3827 10526 0.178926 TAGGGGAAGTTGACGGGTGA 60.179 55.000 0.00 0.00 0.00 4.02
3828 10527 1.003718 GGGGAAGTTGACGGGTGAG 60.004 63.158 0.00 0.00 0.00 3.51
3830 10529 1.752833 GGAAGTTGACGGGTGAGGT 59.247 57.895 0.00 0.00 0.00 3.85
3831 10530 0.971386 GGAAGTTGACGGGTGAGGTA 59.029 55.000 0.00 0.00 0.00 3.08
3832 10531 1.553704 GGAAGTTGACGGGTGAGGTAT 59.446 52.381 0.00 0.00 0.00 2.73
3833 10532 2.027469 GGAAGTTGACGGGTGAGGTATT 60.027 50.000 0.00 0.00 0.00 1.89
3834 10533 3.558533 GGAAGTTGACGGGTGAGGTATTT 60.559 47.826 0.00 0.00 0.00 1.40
3835 10534 3.329929 AGTTGACGGGTGAGGTATTTC 57.670 47.619 0.00 0.00 0.00 2.17
3836 10535 2.904434 AGTTGACGGGTGAGGTATTTCT 59.096 45.455 0.00 0.00 0.00 2.52
3837 10536 3.056035 AGTTGACGGGTGAGGTATTTCTC 60.056 47.826 0.00 0.00 0.00 2.87
3838 10537 2.531771 TGACGGGTGAGGTATTTCTCA 58.468 47.619 0.00 0.00 41.03 3.27
3840 10539 3.517901 TGACGGGTGAGGTATTTCTCAAT 59.482 43.478 0.00 0.00 44.30 2.57
3841 10540 4.019681 TGACGGGTGAGGTATTTCTCAATT 60.020 41.667 0.00 0.00 44.30 2.32
3842 10541 4.514401 ACGGGTGAGGTATTTCTCAATTC 58.486 43.478 0.00 0.00 44.30 2.17
3843 10542 3.877508 CGGGTGAGGTATTTCTCAATTCC 59.122 47.826 0.00 0.00 44.30 3.01
3844 10543 4.384208 CGGGTGAGGTATTTCTCAATTCCT 60.384 45.833 0.00 0.00 44.30 3.36
3845 10544 4.884164 GGGTGAGGTATTTCTCAATTCCTG 59.116 45.833 0.00 0.00 44.30 3.86
3846 10545 4.336713 GGTGAGGTATTTCTCAATTCCTGC 59.663 45.833 0.00 0.00 44.30 4.85
3847 10546 4.943705 GTGAGGTATTTCTCAATTCCTGCA 59.056 41.667 0.00 0.00 44.30 4.41
3849 10548 6.009589 TGAGGTATTTCTCAATTCCTGCAAA 58.990 36.000 0.00 0.00 39.63 3.68
3850 10549 6.493115 TGAGGTATTTCTCAATTCCTGCAAAA 59.507 34.615 0.00 0.00 39.63 2.44
3851 10550 7.015098 TGAGGTATTTCTCAATTCCTGCAAAAA 59.985 33.333 0.00 0.00 39.63 1.94
3852 10551 7.154656 AGGTATTTCTCAATTCCTGCAAAAAC 58.845 34.615 0.00 0.00 38.44 2.43
3853 10552 7.015584 AGGTATTTCTCAATTCCTGCAAAAACT 59.984 33.333 0.00 0.00 38.44 2.66
3854 10553 7.657354 GGTATTTCTCAATTCCTGCAAAAACTT 59.343 33.333 0.00 0.00 29.16 2.66
3855 10554 9.045223 GTATTTCTCAATTCCTGCAAAAACTTT 57.955 29.630 0.00 0.00 0.00 2.66
3857 10556 5.600696 TCTCAATTCCTGCAAAAACTTTCC 58.399 37.500 0.00 0.00 0.00 3.13
3859 10558 4.408596 TCAATTCCTGCAAAAACTTTCCCT 59.591 37.500 0.00 0.00 0.00 4.20
3860 10559 5.600484 TCAATTCCTGCAAAAACTTTCCCTA 59.400 36.000 0.00 0.00 0.00 3.53
3861 10560 6.098982 TCAATTCCTGCAAAAACTTTCCCTAA 59.901 34.615 0.00 0.00 0.00 2.69
3862 10561 5.941555 TTCCTGCAAAAACTTTCCCTAAA 57.058 34.783 0.00 0.00 0.00 1.85
3863 10562 5.529581 TCCTGCAAAAACTTTCCCTAAAG 57.470 39.130 0.00 0.00 46.34 1.85
3864 10563 4.343814 TCCTGCAAAAACTTTCCCTAAAGG 59.656 41.667 3.19 0.00 45.39 3.11
3865 10564 4.100963 CCTGCAAAAACTTTCCCTAAAGGT 59.899 41.667 3.19 0.00 44.70 3.50
3866 10565 5.017294 TGCAAAAACTTTCCCTAAAGGTG 57.983 39.130 3.19 0.00 41.90 4.00
3868 10567 4.141801 GCAAAAACTTTCCCTAAAGGTGGT 60.142 41.667 3.19 0.00 41.90 4.16
3870 10569 6.411376 CAAAAACTTTCCCTAAAGGTGGTTT 58.589 36.000 3.19 0.00 41.90 3.27
3871 10570 6.630203 AAAACTTTCCCTAAAGGTGGTTTT 57.370 33.333 3.19 0.00 41.90 2.43
3872 10571 6.630203 AAACTTTCCCTAAAGGTGGTTTTT 57.370 33.333 3.19 0.00 41.90 1.94
3891 10590 2.157834 TTTTACAGTGGTGCGACGAT 57.842 45.000 0.00 0.00 0.00 3.73
3894 10593 1.873270 TACAGTGGTGCGACGATGCT 61.873 55.000 0.00 0.00 35.36 3.79
3896 10595 3.490759 GTGGTGCGACGATGCTGG 61.491 66.667 0.00 0.00 35.36 4.85
3900 10599 4.733371 TGCGACGATGCTGGCGAA 62.733 61.111 0.00 0.00 35.36 4.70
3901 10600 4.210304 GCGACGATGCTGGCGAAC 62.210 66.667 0.00 0.00 0.00 3.95
3902 10601 2.507102 CGACGATGCTGGCGAACT 60.507 61.111 0.00 0.00 0.00 3.01
3903 10602 2.508891 CGACGATGCTGGCGAACTC 61.509 63.158 0.00 0.00 0.00 3.01
3904 10603 1.446099 GACGATGCTGGCGAACTCA 60.446 57.895 0.00 0.00 0.00 3.41
3905 10604 1.687494 GACGATGCTGGCGAACTCAC 61.687 60.000 0.00 0.00 0.00 3.51
3906 10605 2.792290 CGATGCTGGCGAACTCACG 61.792 63.158 0.00 0.00 0.00 4.35
3924 10623 4.320456 CAGTGGCTGACAGCGGGT 62.320 66.667 20.82 4.85 43.62 5.28
3925 10624 3.560251 AGTGGCTGACAGCGGGTT 61.560 61.111 20.82 4.11 43.62 4.11
3926 10625 3.357079 GTGGCTGACAGCGGGTTG 61.357 66.667 20.82 0.00 43.62 3.77
3927 10626 3.872603 TGGCTGACAGCGGGTTGT 61.873 61.111 20.82 0.00 43.62 3.32
3928 10627 3.357079 GGCTGACAGCGGGTTGTG 61.357 66.667 20.82 0.00 43.62 3.33
3929 10628 4.030452 GCTGACAGCGGGTTGTGC 62.030 66.667 12.53 0.00 0.00 4.57
3930 10629 3.716006 CTGACAGCGGGTTGTGCG 61.716 66.667 0.00 0.00 37.44 5.34
3931 10630 4.228567 TGACAGCGGGTTGTGCGA 62.229 61.111 0.00 0.00 37.44 5.10
3932 10631 3.712881 GACAGCGGGTTGTGCGAC 61.713 66.667 0.00 0.00 37.44 5.19
3933 10632 4.539083 ACAGCGGGTTGTGCGACA 62.539 61.111 0.00 0.00 37.44 4.35
3934 10633 3.716006 CAGCGGGTTGTGCGACAG 61.716 66.667 0.00 0.00 37.44 3.51
3935 10634 4.235762 AGCGGGTTGTGCGACAGT 62.236 61.111 0.00 0.00 37.44 3.55
3936 10635 3.276846 GCGGGTTGTGCGACAGTT 61.277 61.111 0.00 0.00 0.00 3.16
3937 10636 2.631428 CGGGTTGTGCGACAGTTG 59.369 61.111 0.00 0.00 0.00 3.16
3938 10637 2.892334 CGGGTTGTGCGACAGTTGG 61.892 63.158 0.00 0.00 0.00 3.77
3939 10638 1.525077 GGGTTGTGCGACAGTTGGA 60.525 57.895 0.00 0.00 0.00 3.53
3940 10639 1.507141 GGGTTGTGCGACAGTTGGAG 61.507 60.000 0.00 0.00 0.00 3.86
3941 10640 1.507141 GGTTGTGCGACAGTTGGAGG 61.507 60.000 0.00 0.00 0.00 4.30
3942 10641 1.891919 TTGTGCGACAGTTGGAGGC 60.892 57.895 0.00 0.00 0.00 4.70
3943 10642 2.280797 GTGCGACAGTTGGAGGCA 60.281 61.111 0.00 0.00 0.00 4.75
3944 10643 2.031012 TGCGACAGTTGGAGGCAG 59.969 61.111 0.00 0.00 0.00 4.85
3945 10644 3.426568 GCGACAGTTGGAGGCAGC 61.427 66.667 0.00 0.00 0.00 5.25
3946 10645 2.031012 CGACAGTTGGAGGCAGCA 59.969 61.111 0.00 0.00 0.00 4.41
3947 10646 2.031516 CGACAGTTGGAGGCAGCAG 61.032 63.158 0.00 0.00 0.00 4.24
3948 10647 2.282040 ACAGTTGGAGGCAGCAGC 60.282 61.111 0.00 0.00 41.10 5.25
3949 10648 3.429141 CAGTTGGAGGCAGCAGCG 61.429 66.667 0.00 0.00 43.41 5.18
3950 10649 4.711949 AGTTGGAGGCAGCAGCGG 62.712 66.667 0.00 0.00 43.41 5.52
3999 10698 2.505337 CGCGGCGCACTACAGTTA 60.505 61.111 32.61 0.00 0.00 2.24
4000 10699 2.785105 CGCGGCGCACTACAGTTAC 61.785 63.158 32.61 0.00 0.00 2.50
4001 10700 1.735198 GCGGCGCACTACAGTTACA 60.735 57.895 29.21 0.00 0.00 2.41
4003 10702 1.355971 CGGCGCACTACAGTTACAAT 58.644 50.000 10.83 0.00 0.00 2.71
4004 10703 1.730064 CGGCGCACTACAGTTACAATT 59.270 47.619 10.83 0.00 0.00 2.32
4005 10704 2.924926 CGGCGCACTACAGTTACAATTA 59.075 45.455 10.83 0.00 0.00 1.40
4006 10705 3.000078 CGGCGCACTACAGTTACAATTAG 60.000 47.826 10.83 0.00 0.00 1.73
4007 10706 3.242316 GGCGCACTACAGTTACAATTAGC 60.242 47.826 10.83 0.00 0.00 3.09
4008 10707 3.617263 GCGCACTACAGTTACAATTAGCT 59.383 43.478 0.30 0.00 0.00 3.32
4010 10709 5.290158 GCGCACTACAGTTACAATTAGCTAA 59.710 40.000 8.99 8.99 0.00 3.09
4011 10710 6.693342 CGCACTACAGTTACAATTAGCTAAC 58.307 40.000 8.70 0.00 0.00 2.34
4012 10711 6.309494 CGCACTACAGTTACAATTAGCTAACA 59.691 38.462 8.70 0.00 0.00 2.41
4013 10712 7.010183 CGCACTACAGTTACAATTAGCTAACAT 59.990 37.037 8.70 0.00 0.00 2.71
4015 10714 8.604035 CACTACAGTTACAATTAGCTAACATGG 58.396 37.037 19.71 9.10 0.00 3.66
4016 10715 6.436843 ACAGTTACAATTAGCTAACATGGC 57.563 37.500 19.71 12.08 0.00 4.40
4018 10717 4.887655 AGTTACAATTAGCTAACATGGCCC 59.112 41.667 19.71 10.12 0.00 5.80
4019 10718 3.669939 ACAATTAGCTAACATGGCCCT 57.330 42.857 19.71 0.00 0.00 5.19
4020 10719 3.981212 ACAATTAGCTAACATGGCCCTT 58.019 40.909 19.71 3.24 0.00 3.95
4021 10720 4.352893 ACAATTAGCTAACATGGCCCTTT 58.647 39.130 19.71 2.63 0.00 3.11
4022 10721 4.777366 ACAATTAGCTAACATGGCCCTTTT 59.223 37.500 19.71 0.00 0.00 2.27
4023 10722 5.955355 ACAATTAGCTAACATGGCCCTTTTA 59.045 36.000 19.71 0.00 0.00 1.52
4024 10723 6.611236 ACAATTAGCTAACATGGCCCTTTTAT 59.389 34.615 19.71 0.00 0.00 1.40
4025 10724 7.125659 ACAATTAGCTAACATGGCCCTTTTATT 59.874 33.333 19.71 1.05 0.00 1.40
4027 10726 3.706086 AGCTAACATGGCCCTTTTATTGG 59.294 43.478 0.00 0.00 0.00 3.16
4028 10727 3.704061 GCTAACATGGCCCTTTTATTGGA 59.296 43.478 0.00 0.00 0.00 3.53
4029 10728 4.161377 GCTAACATGGCCCTTTTATTGGAA 59.839 41.667 0.00 0.00 0.00 3.53
4030 10729 4.824479 AACATGGCCCTTTTATTGGAAG 57.176 40.909 0.00 0.00 0.00 3.46
4043 10742 3.424640 TGGAAGGGCCATCTTCTCT 57.575 52.632 17.94 0.00 43.33 3.10
4044 10743 1.673767 TGGAAGGGCCATCTTCTCTT 58.326 50.000 17.94 4.98 43.33 2.85
4045 10744 2.845659 TGGAAGGGCCATCTTCTCTTA 58.154 47.619 17.94 4.07 43.33 2.10
4047 10746 3.041946 GGAAGGGCCATCTTCTCTTAGA 58.958 50.000 17.94 0.00 41.94 2.10
4048 10747 3.650461 GGAAGGGCCATCTTCTCTTAGAT 59.350 47.826 17.94 0.00 41.94 1.98
4059 10758 2.402564 TCTCTTAGATGAAGGGGGCAG 58.597 52.381 0.00 0.00 36.15 4.85
4060 10759 2.122768 CTCTTAGATGAAGGGGGCAGT 58.877 52.381 0.00 0.00 35.67 4.40
4061 10760 2.507471 CTCTTAGATGAAGGGGGCAGTT 59.493 50.000 0.00 0.00 35.67 3.16
4062 10761 2.919602 TCTTAGATGAAGGGGGCAGTTT 59.080 45.455 0.00 0.00 35.67 2.66
4063 10762 3.333680 TCTTAGATGAAGGGGGCAGTTTT 59.666 43.478 0.00 0.00 35.67 2.43
4064 10763 1.928868 AGATGAAGGGGGCAGTTTTG 58.071 50.000 0.00 0.00 0.00 2.44
4065 10764 1.428912 AGATGAAGGGGGCAGTTTTGA 59.571 47.619 0.00 0.00 0.00 2.69
4066 10765 2.158325 AGATGAAGGGGGCAGTTTTGAA 60.158 45.455 0.00 0.00 0.00 2.69
4067 10766 1.703411 TGAAGGGGGCAGTTTTGAAG 58.297 50.000 0.00 0.00 0.00 3.02
4069 10768 2.316108 GAAGGGGGCAGTTTTGAAGAA 58.684 47.619 0.00 0.00 0.00 2.52
4070 10769 2.702270 AGGGGGCAGTTTTGAAGAAT 57.298 45.000 0.00 0.00 0.00 2.40
4071 10770 2.976440 AGGGGGCAGTTTTGAAGAATT 58.024 42.857 0.00 0.00 0.00 2.17
4072 10771 3.317406 AGGGGGCAGTTTTGAAGAATTT 58.683 40.909 0.00 0.00 0.00 1.82
4074 10773 3.402110 GGGGCAGTTTTGAAGAATTTGG 58.598 45.455 0.00 0.00 0.00 3.28
4076 10775 3.070878 GGGCAGTTTTGAAGAATTTGGGA 59.929 43.478 0.00 0.00 0.00 4.37
4077 10776 4.309933 GGCAGTTTTGAAGAATTTGGGAG 58.690 43.478 0.00 0.00 0.00 4.30
4079 10778 5.453198 GGCAGTTTTGAAGAATTTGGGAGAA 60.453 40.000 0.00 0.00 0.00 2.87
4080 10779 5.463392 GCAGTTTTGAAGAATTTGGGAGAAC 59.537 40.000 0.00 0.00 0.00 3.01
4081 10780 6.683861 GCAGTTTTGAAGAATTTGGGAGAACT 60.684 38.462 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.418068 GTCTGGCTGCGTGAGTGC 61.418 66.667 0.00 0.00 0.00 4.40
31 32 2.608988 AGGGACCTGCCTGTCTGG 60.609 66.667 0.00 0.00 39.46 3.86
83 87 7.678194 TTTTTAGCGTTTGTTGAAGATTCTG 57.322 32.000 0.00 0.00 0.00 3.02
152 157 0.467844 TAAATCGGCCATGGCATGCT 60.468 50.000 36.56 18.05 44.11 3.79
153 158 0.038892 CTAAATCGGCCATGGCATGC 60.039 55.000 36.56 19.42 44.11 4.06
156 161 1.340502 TGAACTAAATCGGCCATGGCA 60.341 47.619 36.56 19.35 44.11 4.92
170 176 3.410631 TTTTGTCCATCCGCTGAACTA 57.589 42.857 0.00 0.00 0.00 2.24
174 180 5.298276 GGTTATATTTTTGTCCATCCGCTGA 59.702 40.000 0.00 0.00 0.00 4.26
179 185 8.504005 CACTATCGGTTATATTTTTGTCCATCC 58.496 37.037 0.00 0.00 0.00 3.51
182 188 7.496591 GTCCACTATCGGTTATATTTTTGTCCA 59.503 37.037 0.00 0.00 0.00 4.02
184 190 8.428186 TGTCCACTATCGGTTATATTTTTGTC 57.572 34.615 0.00 0.00 0.00 3.18
196 202 1.511305 CGTGCTGTCCACTATCGGT 59.489 57.895 0.00 0.00 42.42 4.69
198 204 1.142185 CTGCGTGCTGTCCACTATCG 61.142 60.000 0.00 0.00 42.42 2.92
200 206 1.448540 GCTGCGTGCTGTCCACTAT 60.449 57.895 0.72 0.00 42.42 2.12
212 218 1.958205 GTCTGCTGAACTGCTGCGT 60.958 57.895 0.00 0.00 43.64 5.24
333 4227 5.627499 CAAGCTAACTTGCTCCAACAATA 57.373 39.130 0.00 0.00 46.38 1.90
348 4242 4.813697 GGTGAAAAATGGTTTGCAAGCTAA 59.186 37.500 13.27 2.64 33.87 3.09
549 4514 1.826054 GCCGCCTCTCTAGAGCTCA 60.826 63.158 17.77 0.82 40.75 4.26
555 4520 3.192954 CTGCTCGCCGCCTCTCTAG 62.193 68.421 0.00 0.00 38.05 2.43
559 4524 4.140599 CTTCTGCTCGCCGCCTCT 62.141 66.667 0.00 0.00 38.05 3.69
591 4556 1.301401 CCTTGAGTTTGACGGCCGA 60.301 57.895 35.90 7.50 0.00 5.54
598 4563 1.667830 CTCGCCGCCTTGAGTTTGA 60.668 57.895 0.00 0.00 0.00 2.69
660 4678 2.761195 CGTCATCTGCTCGTCCCGA 61.761 63.158 0.00 0.00 0.00 5.14
698 4717 1.475751 CCATTCCCTGTAGCTCGCATT 60.476 52.381 0.00 0.00 0.00 3.56
700 4719 1.522092 CCATTCCCTGTAGCTCGCA 59.478 57.895 0.00 0.00 0.00 5.10
740 4784 1.537397 TGCTCCCTCTGCTTGTCCT 60.537 57.895 0.00 0.00 0.00 3.85
745 4789 2.350514 GCTGTGCTCCCTCTGCTT 59.649 61.111 0.00 0.00 0.00 3.91
759 4813 2.856032 CGCGAAGACCAACTGCTG 59.144 61.111 0.00 0.00 0.00 4.41
809 4871 1.424403 CATCGCACGCGGGATATTTA 58.576 50.000 15.48 0.00 42.54 1.40
830 4892 0.597568 CCAGCGCACTTGGAATTTCA 59.402 50.000 11.47 0.00 37.96 2.69
839 4901 3.505680 TGTAAAATTCATCCAGCGCACTT 59.494 39.130 11.47 0.00 0.00 3.16
912 4991 5.705441 TCCAACAGAGGTGCTAAAAATAGTG 59.295 40.000 0.00 0.00 0.00 2.74
960 5039 4.202284 GGTACCGGTGCAATTTATAGGAGA 60.202 45.833 24.62 0.00 0.00 3.71
1157 5264 1.812571 CTTAACTGCCGCCAACAGAAT 59.187 47.619 2.56 0.00 38.55 2.40
1178 5286 2.224090 CCGATCGACCTCTGTCTCTAGA 60.224 54.545 18.66 0.00 39.47 2.43
1334 5628 3.411415 AGTACGTCGTACACCATAAGC 57.589 47.619 31.20 6.98 41.03 3.09
1348 5676 8.865420 AGAGACCAACATATGATATAGTACGT 57.135 34.615 10.38 0.00 0.00 3.57
1349 5677 9.168451 AGAGAGACCAACATATGATATAGTACG 57.832 37.037 10.38 0.00 0.00 3.67
1352 5680 9.241919 CTCAGAGAGACCAACATATGATATAGT 57.758 37.037 10.38 0.00 0.00 2.12
1353 5681 9.241919 ACTCAGAGAGACCAACATATGATATAG 57.758 37.037 10.38 0.00 33.32 1.31
1356 5684 7.230309 CAGACTCAGAGAGACCAACATATGATA 59.770 40.741 10.38 0.00 33.32 2.15
1358 5686 5.359292 CAGACTCAGAGAGACCAACATATGA 59.641 44.000 10.38 0.00 33.32 2.15
1360 5688 5.514169 TCAGACTCAGAGAGACCAACATAT 58.486 41.667 3.79 0.00 33.32 1.78
1378 5772 2.868583 CACATCGGGACATTCATCAGAC 59.131 50.000 0.00 0.00 0.00 3.51
1381 5775 3.196685 TGTACACATCGGGACATTCATCA 59.803 43.478 0.00 0.00 0.00 3.07
1382 5776 3.792401 TGTACACATCGGGACATTCATC 58.208 45.455 0.00 0.00 0.00 2.92
1383 5777 3.432186 CCTGTACACATCGGGACATTCAT 60.432 47.826 0.00 0.00 33.49 2.57
1384 5778 2.093711 CCTGTACACATCGGGACATTCA 60.094 50.000 0.00 0.00 33.49 2.57
1385 5779 2.550978 CCTGTACACATCGGGACATTC 58.449 52.381 0.00 0.00 33.49 2.67
1386 5780 1.406887 GCCTGTACACATCGGGACATT 60.407 52.381 2.39 0.00 33.49 2.71
1387 5781 0.178068 GCCTGTACACATCGGGACAT 59.822 55.000 2.39 0.00 33.49 3.06
1388 5782 1.188871 TGCCTGTACACATCGGGACA 61.189 55.000 2.39 0.00 33.49 4.02
1389 5783 0.739813 GTGCCTGTACACATCGGGAC 60.740 60.000 7.59 7.59 40.40 4.46
1391 5785 1.809619 CGTGCCTGTACACATCGGG 60.810 63.158 0.00 0.00 40.73 5.14
1401 5802 2.048222 CGTCCACATCGTGCCTGT 60.048 61.111 0.00 0.00 31.34 4.00
1514 5915 0.673437 CGAGGGAGAAGAGGAGCATC 59.327 60.000 0.00 0.00 0.00 3.91
1847 6248 1.409427 GAGATCTGGTCGAAATCGGGT 59.591 52.381 0.00 0.00 40.29 5.28
1889 6290 2.365941 GGAGTAGGTGAAGGACATAGCC 59.634 54.545 0.00 0.00 0.00 3.93
1892 6293 3.271225 TGGAGGAGTAGGTGAAGGACATA 59.729 47.826 0.00 0.00 0.00 2.29
1966 6535 4.070716 GCTCAACATGATCTAGGGATTGG 58.929 47.826 0.00 0.00 31.46 3.16
1991 6567 4.397420 TGCAGACATCATTGGTTAACACT 58.603 39.130 8.10 0.00 0.00 3.55
2871 9235 1.246737 GCTTTCACCCTCCAGCCAAG 61.247 60.000 0.00 0.00 0.00 3.61
2894 9258 2.802816 TCGCTCTTCTTTTTGACTCAGC 59.197 45.455 0.00 0.00 0.00 4.26
2971 9336 8.871125 AGTCACTTAGGTATCTTTTCTTTGAGA 58.129 33.333 0.00 0.00 0.00 3.27
2996 9367 6.470570 TGGTGACACTCAGACTGTTGACAG 62.471 50.000 9.50 9.50 42.42 3.51
3007 9378 5.300752 AGAACATTAGTTGGTGACACTCAG 58.699 41.667 5.39 0.00 42.67 3.35
3031 9402 5.057149 AGCTTCTACTACCACACAAAACAG 58.943 41.667 0.00 0.00 0.00 3.16
3077 9651 2.681778 AGTCCGAGCTCAGGGTGG 60.682 66.667 15.40 6.39 0.00 4.61
3096 9670 4.519730 TCATTTGAACATGCATGACACAGA 59.480 37.500 32.75 21.24 0.00 3.41
3097 9671 4.619760 GTCATTTGAACATGCATGACACAG 59.380 41.667 32.75 19.84 43.39 3.66
3118 9692 1.608590 CCATGTTGGTCAGTTGGTGTC 59.391 52.381 0.00 0.00 31.35 3.67
3127 9701 2.556189 CAAAATCGGTCCATGTTGGTCA 59.444 45.455 0.00 0.00 39.03 4.02
3128 9702 2.817258 TCAAAATCGGTCCATGTTGGTC 59.183 45.455 0.00 0.00 39.03 4.02
3129 9703 2.870175 TCAAAATCGGTCCATGTTGGT 58.130 42.857 0.00 0.00 39.03 3.67
3131 9705 3.057315 AGCTTCAAAATCGGTCCATGTTG 60.057 43.478 0.00 0.00 0.00 3.33
3132 9706 3.157087 AGCTTCAAAATCGGTCCATGTT 58.843 40.909 0.00 0.00 0.00 2.71
3133 9707 2.795329 AGCTTCAAAATCGGTCCATGT 58.205 42.857 0.00 0.00 0.00 3.21
3134 9708 4.963276 TTAGCTTCAAAATCGGTCCATG 57.037 40.909 0.00 0.00 0.00 3.66
3135 9709 5.010282 ACTTTAGCTTCAAAATCGGTCCAT 58.990 37.500 0.00 0.00 0.00 3.41
3136 9710 4.394729 ACTTTAGCTTCAAAATCGGTCCA 58.605 39.130 0.00 0.00 0.00 4.02
3137 9711 5.048991 TCAACTTTAGCTTCAAAATCGGTCC 60.049 40.000 0.00 0.00 0.00 4.46
3138 9712 5.997385 TCAACTTTAGCTTCAAAATCGGTC 58.003 37.500 0.00 0.00 0.00 4.79
3139 9713 6.349363 GGATCAACTTTAGCTTCAAAATCGGT 60.349 38.462 0.00 0.00 0.00 4.69
3200 9774 6.765512 AGAAAATGAAGATTCTTCCGAGGATC 59.234 38.462 20.87 12.51 38.06 3.36
3345 9962 2.390225 ACCCACTCAAGAGTCAGAGT 57.610 50.000 11.27 11.27 45.46 3.24
3346 9963 2.352225 CGAACCCACTCAAGAGTCAGAG 60.352 54.545 10.15 10.15 40.20 3.35
3347 9964 1.613925 CGAACCCACTCAAGAGTCAGA 59.386 52.381 0.00 0.00 40.20 3.27
3348 9965 1.341531 ACGAACCCACTCAAGAGTCAG 59.658 52.381 0.00 0.00 40.20 3.51
3350 9967 1.784525 CACGAACCCACTCAAGAGTC 58.215 55.000 0.00 0.00 40.20 3.36
3474 10173 5.593909 TCCTCTACGTATTTTAATCGTGGGA 59.406 40.000 0.00 0.00 38.27 4.37
3504 10203 1.826385 AAACTGTGCTATGCCTGACC 58.174 50.000 0.00 0.00 0.00 4.02
3505 10204 3.941483 ACATAAACTGTGCTATGCCTGAC 59.059 43.478 9.08 0.00 36.48 3.51
3507 10206 4.970662 AACATAAACTGTGCTATGCCTG 57.029 40.909 9.08 0.00 38.39 4.85
3508 10207 4.094887 CGAAACATAAACTGTGCTATGCCT 59.905 41.667 9.08 0.00 38.39 4.75
3509 10208 4.142687 ACGAAACATAAACTGTGCTATGCC 60.143 41.667 9.08 1.56 38.39 4.40
3510 10209 4.969816 ACGAAACATAAACTGTGCTATGC 58.030 39.130 9.08 0.00 38.39 3.14
3511 10210 6.021596 GGAACGAAACATAAACTGTGCTATG 58.978 40.000 0.00 8.04 38.39 2.23
3512 10211 5.938125 AGGAACGAAACATAAACTGTGCTAT 59.062 36.000 0.00 0.00 38.39 2.97
3513 10212 5.302360 AGGAACGAAACATAAACTGTGCTA 58.698 37.500 0.00 0.00 38.39 3.49
3515 10214 4.483476 AGGAACGAAACATAAACTGTGC 57.517 40.909 0.00 0.00 38.39 4.57
3516 10215 4.675114 GCAAGGAACGAAACATAAACTGTG 59.325 41.667 0.00 0.00 38.39 3.66
3518 10217 4.226761 GGCAAGGAACGAAACATAAACTG 58.773 43.478 0.00 0.00 0.00 3.16
3519 10218 3.886505 TGGCAAGGAACGAAACATAAACT 59.113 39.130 0.00 0.00 0.00 2.66
3520 10219 3.978855 GTGGCAAGGAACGAAACATAAAC 59.021 43.478 0.00 0.00 0.00 2.01
3521 10220 3.632604 TGTGGCAAGGAACGAAACATAAA 59.367 39.130 0.00 0.00 0.00 1.40
3522 10221 3.215151 TGTGGCAAGGAACGAAACATAA 58.785 40.909 0.00 0.00 0.00 1.90
3524 10223 1.686355 TGTGGCAAGGAACGAAACAT 58.314 45.000 0.00 0.00 0.00 2.71
3525 10224 1.606668 GATGTGGCAAGGAACGAAACA 59.393 47.619 0.00 0.00 0.00 2.83
3526 10225 1.880027 AGATGTGGCAAGGAACGAAAC 59.120 47.619 0.00 0.00 0.00 2.78
3528 10227 1.071542 TGAGATGTGGCAAGGAACGAA 59.928 47.619 0.00 0.00 0.00 3.85
3529 10228 0.684535 TGAGATGTGGCAAGGAACGA 59.315 50.000 0.00 0.00 0.00 3.85
3531 10230 4.525912 AAATTGAGATGTGGCAAGGAAC 57.474 40.909 0.00 0.00 0.00 3.62
3534 10233 4.201990 GCTCTAAATTGAGATGTGGCAAGG 60.202 45.833 0.00 0.00 36.23 3.61
3535 10234 4.397103 TGCTCTAAATTGAGATGTGGCAAG 59.603 41.667 2.67 0.00 36.23 4.01
3536 10235 4.334552 TGCTCTAAATTGAGATGTGGCAA 58.665 39.130 2.67 0.00 36.23 4.52
3537 10236 3.954200 TGCTCTAAATTGAGATGTGGCA 58.046 40.909 1.24 1.24 36.23 4.92
3539 10238 6.095860 TGGAAATGCTCTAAATTGAGATGTGG 59.904 38.462 0.00 0.00 36.23 4.17
3540 10239 7.092137 TGGAAATGCTCTAAATTGAGATGTG 57.908 36.000 0.00 0.00 36.23 3.21
3542 10241 6.183360 TGCTGGAAATGCTCTAAATTGAGATG 60.183 38.462 0.00 0.00 36.23 2.90
3546 10245 4.142315 GCTGCTGGAAATGCTCTAAATTGA 60.142 41.667 0.00 0.00 0.00 2.57
3547 10246 4.110482 GCTGCTGGAAATGCTCTAAATTG 58.890 43.478 0.00 0.00 0.00 2.32
3548 10247 4.021916 AGCTGCTGGAAATGCTCTAAATT 58.978 39.130 0.00 0.00 0.00 1.82
3549 10248 3.629087 AGCTGCTGGAAATGCTCTAAAT 58.371 40.909 0.00 0.00 0.00 1.40
3551 10250 2.795231 AGCTGCTGGAAATGCTCTAA 57.205 45.000 0.00 0.00 0.00 2.10
3552 10251 2.026915 TGAAGCTGCTGGAAATGCTCTA 60.027 45.455 1.35 0.00 34.38 2.43
3553 10252 1.271762 TGAAGCTGCTGGAAATGCTCT 60.272 47.619 1.35 0.00 34.38 4.09
3554 10253 1.171308 TGAAGCTGCTGGAAATGCTC 58.829 50.000 1.35 0.00 34.38 4.26
3556 10255 3.788333 TTATGAAGCTGCTGGAAATGC 57.212 42.857 1.35 0.00 0.00 3.56
3557 10256 7.548075 AGAAATTTTATGAAGCTGCTGGAAATG 59.452 33.333 1.35 0.00 0.00 2.32
3559 10258 6.996509 AGAAATTTTATGAAGCTGCTGGAAA 58.003 32.000 1.35 1.03 0.00 3.13
3560 10259 6.594788 AGAAATTTTATGAAGCTGCTGGAA 57.405 33.333 1.35 0.00 0.00 3.53
3561 10260 6.594788 AAGAAATTTTATGAAGCTGCTGGA 57.405 33.333 1.35 0.00 0.00 3.86
3562 10261 7.411157 CGAAAAGAAATTTTATGAAGCTGCTGG 60.411 37.037 1.35 0.00 0.00 4.85
3563 10262 7.115378 ACGAAAAGAAATTTTATGAAGCTGCTG 59.885 33.333 1.35 0.00 0.00 4.41
3565 10264 7.338440 ACGAAAAGAAATTTTATGAAGCTGC 57.662 32.000 0.00 0.00 0.00 5.25
3575 10274 9.647797 AAACAGACCTTTACGAAAAGAAATTTT 57.352 25.926 0.00 0.00 44.14 1.82
3577 10276 9.946165 CTAAACAGACCTTTACGAAAAGAAATT 57.054 29.630 0.00 0.00 44.14 1.82
3578 10277 9.333724 TCTAAACAGACCTTTACGAAAAGAAAT 57.666 29.630 0.00 0.00 44.14 2.17
3579 10278 8.721019 TCTAAACAGACCTTTACGAAAAGAAA 57.279 30.769 0.00 0.00 44.14 2.52
3580 10279 8.606602 GTTCTAAACAGACCTTTACGAAAAGAA 58.393 33.333 0.00 0.00 44.14 2.52
3581 10280 7.765360 TGTTCTAAACAGACCTTTACGAAAAGA 59.235 33.333 0.00 0.00 39.48 2.52
3582 10281 7.849515 GTGTTCTAAACAGACCTTTACGAAAAG 59.150 37.037 0.00 0.00 43.10 2.27
3584 10283 6.817641 TGTGTTCTAAACAGACCTTTACGAAA 59.182 34.615 0.00 0.00 43.10 3.46
3587 10286 6.645415 AGATGTGTTCTAAACAGACCTTTACG 59.355 38.462 0.00 0.00 43.10 3.18
3589 10288 9.085645 TCTAGATGTGTTCTAAACAGACCTTTA 57.914 33.333 0.00 0.00 43.10 1.85
3590 10289 7.963532 TCTAGATGTGTTCTAAACAGACCTTT 58.036 34.615 0.00 0.00 43.10 3.11
3591 10290 7.540474 TCTAGATGTGTTCTAAACAGACCTT 57.460 36.000 0.00 0.00 43.10 3.50
3593 10292 9.469807 CATATCTAGATGTGTTCTAAACAGACC 57.530 37.037 18.60 0.00 43.10 3.85
3627 10326 9.725019 AGTGAAAATCAGTTTAGATGTGACATA 57.275 29.630 0.00 0.00 0.00 2.29
3630 10329 8.226448 CAGAGTGAAAATCAGTTTAGATGTGAC 58.774 37.037 0.00 0.00 30.01 3.67
3631 10330 7.933577 ACAGAGTGAAAATCAGTTTAGATGTGA 59.066 33.333 0.00 0.00 30.01 3.58
3632 10331 8.092521 ACAGAGTGAAAATCAGTTTAGATGTG 57.907 34.615 0.00 0.00 30.01 3.21
3633 10332 8.682936 AACAGAGTGAAAATCAGTTTAGATGT 57.317 30.769 0.00 0.00 37.35 3.06
3634 10333 9.390795 CAAACAGAGTGAAAATCAGTTTAGATG 57.609 33.333 0.00 0.00 46.29 2.90
3636 10335 8.397906 CACAAACAGAGTGAAAATCAGTTTAGA 58.602 33.333 0.00 0.00 46.29 2.10
3638 10337 7.122055 ACCACAAACAGAGTGAAAATCAGTTTA 59.878 33.333 0.00 0.00 46.29 2.01
3640 10339 5.418840 ACCACAAACAGAGTGAAAATCAGTT 59.581 36.000 0.00 0.00 42.40 3.16
3642 10341 5.297776 AGACCACAAACAGAGTGAAAATCAG 59.702 40.000 0.00 0.00 39.30 2.90
3643 10342 5.192927 AGACCACAAACAGAGTGAAAATCA 58.807 37.500 0.00 0.00 39.30 2.57
3644 10343 5.757850 AGACCACAAACAGAGTGAAAATC 57.242 39.130 0.00 0.00 39.30 2.17
3646 10345 7.639113 AAATAGACCACAAACAGAGTGAAAA 57.361 32.000 0.00 0.00 39.30 2.29
3647 10346 7.639113 AAAATAGACCACAAACAGAGTGAAA 57.361 32.000 0.00 0.00 39.30 2.69
3696 10395 8.163408 AGCTCCCACAAATATATAATGCAGTAA 58.837 33.333 0.00 0.00 0.00 2.24
3697 10396 7.689299 AGCTCCCACAAATATATAATGCAGTA 58.311 34.615 0.00 0.00 0.00 2.74
3698 10397 6.546484 AGCTCCCACAAATATATAATGCAGT 58.454 36.000 0.00 0.00 0.00 4.40
3700 10399 8.382405 TCTAAGCTCCCACAAATATATAATGCA 58.618 33.333 0.00 0.00 0.00 3.96
3705 10404 8.321353 CCACATCTAAGCTCCCACAAATATATA 58.679 37.037 0.00 0.00 0.00 0.86
3706 10405 7.170965 CCACATCTAAGCTCCCACAAATATAT 58.829 38.462 0.00 0.00 0.00 0.86
3707 10406 6.533730 CCACATCTAAGCTCCCACAAATATA 58.466 40.000 0.00 0.00 0.00 0.86
3709 10408 4.780815 CCACATCTAAGCTCCCACAAATA 58.219 43.478 0.00 0.00 0.00 1.40
3710 10409 3.624777 CCACATCTAAGCTCCCACAAAT 58.375 45.455 0.00 0.00 0.00 2.32
3711 10410 2.879756 GCCACATCTAAGCTCCCACAAA 60.880 50.000 0.00 0.00 0.00 2.83
3713 10412 0.253044 GCCACATCTAAGCTCCCACA 59.747 55.000 0.00 0.00 0.00 4.17
3715 10414 1.216064 ATGCCACATCTAAGCTCCCA 58.784 50.000 0.00 0.00 0.00 4.37
3716 10415 2.225467 GAATGCCACATCTAAGCTCCC 58.775 52.381 0.00 0.00 0.00 4.30
3717 10416 2.158696 AGGAATGCCACATCTAAGCTCC 60.159 50.000 0.00 0.00 36.29 4.70
3718 10417 3.205784 AGGAATGCCACATCTAAGCTC 57.794 47.619 0.00 0.00 36.29 4.09
3719 10418 4.778213 TTAGGAATGCCACATCTAAGCT 57.222 40.909 0.00 0.00 36.29 3.74
3749 10448 8.664798 CGGAACAATTTGTCTAATTCACATCTA 58.335 33.333 1.83 0.00 34.19 1.98
3750 10449 7.174946 ACGGAACAATTTGTCTAATTCACATCT 59.825 33.333 1.83 0.00 34.19 2.90
3753 10452 6.627395 ACGGAACAATTTGTCTAATTCACA 57.373 33.333 1.83 0.00 34.19 3.58
3755 10454 9.672086 CTTTTACGGAACAATTTGTCTAATTCA 57.328 29.630 1.83 0.00 34.19 2.57
3756 10455 9.673454 ACTTTTACGGAACAATTTGTCTAATTC 57.327 29.630 1.83 0.00 34.19 2.17
3757 10456 9.458374 CACTTTTACGGAACAATTTGTCTAATT 57.542 29.630 1.83 0.00 36.90 1.40
3758 10457 8.079809 CCACTTTTACGGAACAATTTGTCTAAT 58.920 33.333 1.83 0.00 0.00 1.73
3759 10458 7.067251 ACCACTTTTACGGAACAATTTGTCTAA 59.933 33.333 1.83 0.00 0.00 2.10
3760 10459 6.543100 ACCACTTTTACGGAACAATTTGTCTA 59.457 34.615 1.83 0.00 0.00 2.59
3761 10460 5.358725 ACCACTTTTACGGAACAATTTGTCT 59.641 36.000 1.83 0.00 0.00 3.41
3762 10461 5.584442 ACCACTTTTACGGAACAATTTGTC 58.416 37.500 1.83 0.00 0.00 3.18
3764 10463 6.895607 AAACCACTTTTACGGAACAATTTG 57.104 33.333 0.00 0.00 0.00 2.32
3776 10475 7.924940 ACGGTTATTTCGTAAAACCACTTTTA 58.075 30.769 14.36 0.00 42.31 1.52
3777 10476 6.794374 ACGGTTATTTCGTAAAACCACTTTT 58.206 32.000 14.36 0.00 42.31 2.27
3778 10477 6.375945 ACGGTTATTTCGTAAAACCACTTT 57.624 33.333 14.36 0.00 42.31 2.66
3779 10478 7.489574 TTACGGTTATTTCGTAAAACCACTT 57.510 32.000 14.36 5.54 45.94 3.16
3787 10486 8.672815 CCCCTAAATTTTACGGTTATTTCGTAA 58.327 33.333 0.00 5.18 46.82 3.18
3788 10487 8.043710 TCCCCTAAATTTTACGGTTATTTCGTA 58.956 33.333 0.00 0.00 41.38 3.43
3789 10488 6.883756 TCCCCTAAATTTTACGGTTATTTCGT 59.116 34.615 0.00 0.00 43.64 3.85
3790 10489 7.319142 TCCCCTAAATTTTACGGTTATTTCG 57.681 36.000 0.00 0.00 0.00 3.46
3791 10490 8.742777 ACTTCCCCTAAATTTTACGGTTATTTC 58.257 33.333 0.00 0.00 0.00 2.17
3792 10491 8.654485 ACTTCCCCTAAATTTTACGGTTATTT 57.346 30.769 0.00 0.00 0.00 1.40
3793 10492 8.525316 CAACTTCCCCTAAATTTTACGGTTATT 58.475 33.333 0.00 0.00 0.00 1.40
3794 10493 7.889600 TCAACTTCCCCTAAATTTTACGGTTAT 59.110 33.333 0.00 0.00 0.00 1.89
3795 10494 7.174772 GTCAACTTCCCCTAAATTTTACGGTTA 59.825 37.037 0.00 0.00 0.00 2.85
3796 10495 6.016024 GTCAACTTCCCCTAAATTTTACGGTT 60.016 38.462 0.00 0.00 0.00 4.44
3797 10496 5.474532 GTCAACTTCCCCTAAATTTTACGGT 59.525 40.000 0.00 0.00 0.00 4.83
3801 10500 5.011586 CCCGTCAACTTCCCCTAAATTTTA 58.988 41.667 0.00 0.00 0.00 1.52
3802 10501 3.830178 CCCGTCAACTTCCCCTAAATTTT 59.170 43.478 0.00 0.00 0.00 1.82
3803 10502 3.181426 ACCCGTCAACTTCCCCTAAATTT 60.181 43.478 0.00 0.00 0.00 1.82
3804 10503 2.377531 ACCCGTCAACTTCCCCTAAATT 59.622 45.455 0.00 0.00 0.00 1.82
3805 10504 1.990327 ACCCGTCAACTTCCCCTAAAT 59.010 47.619 0.00 0.00 0.00 1.40
3806 10505 1.072648 CACCCGTCAACTTCCCCTAAA 59.927 52.381 0.00 0.00 0.00 1.85
3807 10506 0.688487 CACCCGTCAACTTCCCCTAA 59.312 55.000 0.00 0.00 0.00 2.69
3808 10507 0.178926 TCACCCGTCAACTTCCCCTA 60.179 55.000 0.00 0.00 0.00 3.53
3810 10509 1.003718 CTCACCCGTCAACTTCCCC 60.004 63.158 0.00 0.00 0.00 4.81
3811 10510 1.003718 CCTCACCCGTCAACTTCCC 60.004 63.158 0.00 0.00 0.00 3.97
3812 10511 0.971386 TACCTCACCCGTCAACTTCC 59.029 55.000 0.00 0.00 0.00 3.46
3815 10514 2.904434 AGAAATACCTCACCCGTCAACT 59.096 45.455 0.00 0.00 0.00 3.16
3817 10516 2.901192 TGAGAAATACCTCACCCGTCAA 59.099 45.455 0.00 0.00 38.18 3.18
3818 10517 2.531771 TGAGAAATACCTCACCCGTCA 58.468 47.619 0.00 0.00 38.18 4.35
3820 10519 4.514401 GAATTGAGAAATACCTCACCCGT 58.486 43.478 0.00 0.00 42.33 5.28
3821 10520 3.877508 GGAATTGAGAAATACCTCACCCG 59.122 47.826 0.00 0.00 42.33 5.28
3822 10521 4.884164 CAGGAATTGAGAAATACCTCACCC 59.116 45.833 0.00 0.00 42.33 4.61
3824 10523 4.943705 TGCAGGAATTGAGAAATACCTCAC 59.056 41.667 0.00 0.00 42.33 3.51
3826 10525 6.515272 TTTGCAGGAATTGAGAAATACCTC 57.485 37.500 0.00 0.00 0.00 3.85
3827 10526 6.916360 TTTTGCAGGAATTGAGAAATACCT 57.084 33.333 0.00 0.00 0.00 3.08
3828 10527 7.154656 AGTTTTTGCAGGAATTGAGAAATACC 58.845 34.615 0.00 0.00 0.00 2.73
3830 10529 9.260002 GAAAGTTTTTGCAGGAATTGAGAAATA 57.740 29.630 0.00 0.00 0.00 1.40
3831 10530 7.227314 GGAAAGTTTTTGCAGGAATTGAGAAAT 59.773 33.333 0.00 0.00 0.00 2.17
3832 10531 6.538381 GGAAAGTTTTTGCAGGAATTGAGAAA 59.462 34.615 0.00 0.00 0.00 2.52
3833 10532 6.048509 GGAAAGTTTTTGCAGGAATTGAGAA 58.951 36.000 0.00 0.00 0.00 2.87
3834 10533 5.453198 GGGAAAGTTTTTGCAGGAATTGAGA 60.453 40.000 0.00 0.00 0.00 3.27
3835 10534 4.751600 GGGAAAGTTTTTGCAGGAATTGAG 59.248 41.667 0.00 0.00 0.00 3.02
3836 10535 4.408596 AGGGAAAGTTTTTGCAGGAATTGA 59.591 37.500 0.00 0.00 0.00 2.57
3837 10536 4.707105 AGGGAAAGTTTTTGCAGGAATTG 58.293 39.130 0.00 0.00 0.00 2.32
3838 10537 6.493189 TTAGGGAAAGTTTTTGCAGGAATT 57.507 33.333 0.00 0.00 0.00 2.17
3840 10539 5.163353 CCTTTAGGGAAAGTTTTTGCAGGAA 60.163 40.000 0.00 0.00 40.53 3.36
3841 10540 4.343814 CCTTTAGGGAAAGTTTTTGCAGGA 59.656 41.667 0.00 0.00 40.53 3.86
3842 10541 4.100963 ACCTTTAGGGAAAGTTTTTGCAGG 59.899 41.667 0.10 0.00 40.53 4.85
3843 10542 5.049828 CACCTTTAGGGAAAGTTTTTGCAG 58.950 41.667 0.10 0.00 40.53 4.41
3844 10543 4.141824 CCACCTTTAGGGAAAGTTTTTGCA 60.142 41.667 0.10 0.00 40.53 4.08
3845 10544 4.141801 ACCACCTTTAGGGAAAGTTTTTGC 60.142 41.667 0.10 0.00 40.53 3.68
3846 10545 5.607939 ACCACCTTTAGGGAAAGTTTTTG 57.392 39.130 0.10 0.00 40.53 2.44
3847 10546 6.630203 AAACCACCTTTAGGGAAAGTTTTT 57.370 33.333 0.10 0.00 40.53 1.94
3849 10548 6.630203 AAAAACCACCTTTAGGGAAAGTTT 57.370 33.333 0.10 0.00 40.53 2.66
3871 10570 1.937278 TCGTCGCACCACTGTAAAAA 58.063 45.000 0.00 0.00 0.00 1.94
3872 10571 1.795872 CATCGTCGCACCACTGTAAAA 59.204 47.619 0.00 0.00 0.00 1.52
3873 10572 1.424403 CATCGTCGCACCACTGTAAA 58.576 50.000 0.00 0.00 0.00 2.01
3874 10573 1.011968 GCATCGTCGCACCACTGTAA 61.012 55.000 0.00 0.00 0.00 2.41
3875 10574 1.445410 GCATCGTCGCACCACTGTA 60.445 57.895 0.00 0.00 0.00 2.74
3877 10576 2.433145 AGCATCGTCGCACCACTG 60.433 61.111 1.90 0.00 0.00 3.66
3878 10577 2.433145 CAGCATCGTCGCACCACT 60.433 61.111 1.90 0.00 0.00 4.00
3879 10578 3.490759 CCAGCATCGTCGCACCAC 61.491 66.667 1.90 0.00 0.00 4.16
3883 10582 4.733371 TTCGCCAGCATCGTCGCA 62.733 61.111 1.90 0.00 0.00 5.10
3884 10583 4.210304 GTTCGCCAGCATCGTCGC 62.210 66.667 0.00 0.00 0.00 5.19
3888 10587 2.792290 CGTGAGTTCGCCAGCATCG 61.792 63.158 0.00 0.00 0.00 3.84
3889 10588 3.084579 CGTGAGTTCGCCAGCATC 58.915 61.111 0.00 0.00 0.00 3.91
3897 10596 2.356313 AGCCACTGCGTGAGTTCG 60.356 61.111 9.75 0.00 44.33 3.95
3900 10599 2.029666 GTCAGCCACTGCGTGAGT 59.970 61.111 9.75 0.00 44.33 3.41
3901 10600 2.025969 CTGTCAGCCACTGCGTGAG 61.026 63.158 9.75 2.68 44.33 3.51
3902 10601 2.029518 CTGTCAGCCACTGCGTGA 59.970 61.111 9.75 0.00 44.33 4.35
3903 10602 3.720193 GCTGTCAGCCACTGCGTG 61.720 66.667 14.27 2.27 44.33 5.34
3907 10606 3.832237 AACCCGCTGTCAGCCACTG 62.832 63.158 19.14 4.91 38.18 3.66
3908 10607 3.560251 AACCCGCTGTCAGCCACT 61.560 61.111 19.14 0.00 38.18 4.00
3909 10608 3.357079 CAACCCGCTGTCAGCCAC 61.357 66.667 19.14 0.00 38.18 5.01
3910 10609 3.872603 ACAACCCGCTGTCAGCCA 61.873 61.111 19.14 0.00 38.18 4.75
3911 10610 3.357079 CACAACCCGCTGTCAGCC 61.357 66.667 19.14 1.88 38.18 4.85
3912 10611 4.030452 GCACAACCCGCTGTCAGC 62.030 66.667 15.22 15.22 38.02 4.26
3913 10612 3.716006 CGCACAACCCGCTGTCAG 61.716 66.667 0.00 0.00 0.00 3.51
3914 10613 4.228567 TCGCACAACCCGCTGTCA 62.229 61.111 0.00 0.00 0.00 3.58
3915 10614 3.712881 GTCGCACAACCCGCTGTC 61.713 66.667 0.00 0.00 0.00 3.51
3916 10615 4.539083 TGTCGCACAACCCGCTGT 62.539 61.111 0.00 0.00 0.00 4.40
3917 10616 3.716006 CTGTCGCACAACCCGCTG 61.716 66.667 0.00 0.00 0.00 5.18
3918 10617 3.750373 AACTGTCGCACAACCCGCT 62.750 57.895 0.00 0.00 0.00 5.52
3919 10618 3.276846 AACTGTCGCACAACCCGC 61.277 61.111 0.00 0.00 0.00 6.13
3920 10619 2.631428 CAACTGTCGCACAACCCG 59.369 61.111 0.00 0.00 0.00 5.28
3921 10620 1.507141 CTCCAACTGTCGCACAACCC 61.507 60.000 0.00 0.00 0.00 4.11
3922 10621 1.507141 CCTCCAACTGTCGCACAACC 61.507 60.000 0.00 0.00 0.00 3.77
3923 10622 1.941812 CCTCCAACTGTCGCACAAC 59.058 57.895 0.00 0.00 0.00 3.32
3924 10623 1.891919 GCCTCCAACTGTCGCACAA 60.892 57.895 0.00 0.00 0.00 3.33
3925 10624 2.280797 GCCTCCAACTGTCGCACA 60.281 61.111 0.00 0.00 0.00 4.57
3926 10625 2.280797 TGCCTCCAACTGTCGCAC 60.281 61.111 0.00 0.00 0.00 5.34
3927 10626 2.031012 CTGCCTCCAACTGTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
3928 10627 3.426568 GCTGCCTCCAACTGTCGC 61.427 66.667 0.00 0.00 0.00 5.19
3929 10628 2.031012 TGCTGCCTCCAACTGTCG 59.969 61.111 0.00 0.00 0.00 4.35
3930 10629 2.331132 GCTGCTGCCTCCAACTGTC 61.331 63.158 3.85 0.00 0.00 3.51
3931 10630 2.282040 GCTGCTGCCTCCAACTGT 60.282 61.111 3.85 0.00 0.00 3.55
3932 10631 3.429141 CGCTGCTGCCTCCAACTG 61.429 66.667 10.24 0.00 35.36 3.16
3933 10632 4.711949 CCGCTGCTGCCTCCAACT 62.712 66.667 10.24 0.00 35.36 3.16
3984 10683 1.355971 ATTGTAACTGTAGTGCGCCG 58.644 50.000 4.18 0.00 0.00 6.46
3986 10685 3.617263 AGCTAATTGTAACTGTAGTGCGC 59.383 43.478 0.00 0.00 0.00 6.09
3987 10686 6.309494 TGTTAGCTAATTGTAACTGTAGTGCG 59.691 38.462 9.88 0.00 31.54 5.34
3991 10690 7.254795 GGCCATGTTAGCTAATTGTAACTGTAG 60.255 40.741 9.88 0.00 31.54 2.74
3992 10691 6.540914 GGCCATGTTAGCTAATTGTAACTGTA 59.459 38.462 9.88 0.00 31.54 2.74
3994 10693 5.221048 GGGCCATGTTAGCTAATTGTAACTG 60.221 44.000 9.88 0.65 31.54 3.16
3996 10695 4.887655 AGGGCCATGTTAGCTAATTGTAAC 59.112 41.667 9.88 0.00 0.00 2.50
3997 10696 5.124036 AGGGCCATGTTAGCTAATTGTAA 57.876 39.130 9.88 0.00 0.00 2.41
3998 10697 4.788925 AGGGCCATGTTAGCTAATTGTA 57.211 40.909 9.88 0.00 0.00 2.41
3999 10698 3.669939 AGGGCCATGTTAGCTAATTGT 57.330 42.857 9.88 0.00 0.00 2.71
4000 10699 5.343307 AAAAGGGCCATGTTAGCTAATTG 57.657 39.130 9.88 10.44 0.00 2.32
4001 10700 7.418942 CCAATAAAAGGGCCATGTTAGCTAATT 60.419 37.037 9.88 0.00 0.00 1.40
4003 10702 5.362430 CCAATAAAAGGGCCATGTTAGCTAA 59.638 40.000 6.18 0.86 0.00 3.09
4004 10703 4.892934 CCAATAAAAGGGCCATGTTAGCTA 59.107 41.667 6.18 0.00 0.00 3.32
4005 10704 3.706086 CCAATAAAAGGGCCATGTTAGCT 59.294 43.478 6.18 0.00 0.00 3.32
4006 10705 3.704061 TCCAATAAAAGGGCCATGTTAGC 59.296 43.478 6.18 0.00 0.00 3.09
4007 10706 5.163416 CCTTCCAATAAAAGGGCCATGTTAG 60.163 44.000 6.18 0.00 39.75 2.34
4008 10707 4.714308 CCTTCCAATAAAAGGGCCATGTTA 59.286 41.667 6.18 2.94 39.75 2.41
4010 10709 3.106827 CCTTCCAATAAAAGGGCCATGT 58.893 45.455 6.18 0.00 39.75 3.21
4011 10710 3.825143 CCTTCCAATAAAAGGGCCATG 57.175 47.619 6.18 0.00 39.75 3.66
4027 10726 4.640364 CATCTAAGAGAAGATGGCCCTTC 58.360 47.826 12.48 12.48 46.07 3.46
4028 10727 4.703379 CATCTAAGAGAAGATGGCCCTT 57.297 45.455 0.00 0.00 46.07 3.95
4035 10734 3.650461 GCCCCCTTCATCTAAGAGAAGAT 59.350 47.826 0.00 0.00 42.95 2.40
4037 10736 2.774234 TGCCCCCTTCATCTAAGAGAAG 59.226 50.000 0.00 0.00 40.64 2.85
4038 10737 2.774234 CTGCCCCCTTCATCTAAGAGAA 59.226 50.000 0.00 0.00 37.38 2.87
4042 10741 3.372440 AAACTGCCCCCTTCATCTAAG 57.628 47.619 0.00 0.00 34.73 2.18
4043 10742 3.075283 TCAAAACTGCCCCCTTCATCTAA 59.925 43.478 0.00 0.00 0.00 2.10
4044 10743 2.647299 TCAAAACTGCCCCCTTCATCTA 59.353 45.455 0.00 0.00 0.00 1.98
4045 10744 1.428912 TCAAAACTGCCCCCTTCATCT 59.571 47.619 0.00 0.00 0.00 2.90
4047 10746 2.158325 TCTTCAAAACTGCCCCCTTCAT 60.158 45.455 0.00 0.00 0.00 2.57
4048 10747 1.216678 TCTTCAAAACTGCCCCCTTCA 59.783 47.619 0.00 0.00 0.00 3.02
4049 10748 1.995376 TCTTCAAAACTGCCCCCTTC 58.005 50.000 0.00 0.00 0.00 3.46
4050 10749 2.470057 TTCTTCAAAACTGCCCCCTT 57.530 45.000 0.00 0.00 0.00 3.95
4052 10751 3.402110 CAAATTCTTCAAAACTGCCCCC 58.598 45.455 0.00 0.00 0.00 5.40
4053 10752 3.402110 CCAAATTCTTCAAAACTGCCCC 58.598 45.455 0.00 0.00 0.00 5.80
4055 10754 4.039124 TCTCCCAAATTCTTCAAAACTGCC 59.961 41.667 0.00 0.00 0.00 4.85
4056 10755 5.200368 TCTCCCAAATTCTTCAAAACTGC 57.800 39.130 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.