Multiple sequence alignment - TraesCS3A01G405500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G405500 chr3A 100.000 4285 0 0 1 4285 649943637 649939353 0.000000e+00 7914.0
1 TraesCS3A01G405500 chr3D 95.399 2608 83 12 708 3300 515679938 515677353 0.000000e+00 4117.0
2 TraesCS3A01G405500 chr3D 86.635 636 55 13 1212 1823 22919590 22920219 0.000000e+00 676.0
3 TraesCS3A01G405500 chr3D 91.053 190 15 2 948 1136 22919374 22919562 5.500000e-64 255.0
4 TraesCS3A01G405500 chr3D 82.022 267 22 8 3356 3598 515677186 515676922 2.020000e-48 204.0
5 TraesCS3A01G405500 chr3D 76.522 460 47 31 3860 4285 515676863 515676431 1.220000e-45 195.0
6 TraesCS3A01G405500 chr3B 92.271 1462 80 15 663 2115 678175838 678174401 0.000000e+00 2043.0
7 TraesCS3A01G405500 chr3B 88.594 1017 92 17 2284 3294 678173253 678172255 0.000000e+00 1214.0
8 TraesCS3A01G405500 chr3B 79.661 472 35 18 3860 4285 678171776 678171320 2.520000e-72 283.0
9 TraesCS3A01G405500 chr3B 80.000 265 29 11 3356 3598 678172084 678171822 1.580000e-39 174.0
10 TraesCS3A01G405500 chr7D 88.889 585 64 1 1 585 14770512 14769929 0.000000e+00 719.0
11 TraesCS3A01G405500 chr7D 86.517 623 59 12 1212 1811 22382259 22382879 0.000000e+00 662.0
12 TraesCS3A01G405500 chr7D 86.254 582 73 7 1 580 532621464 532622040 3.640000e-175 625.0
13 TraesCS3A01G405500 chr7D 87.500 192 22 2 947 1137 22382042 22382232 2.010000e-53 220.0
14 TraesCS3A01G405500 chr4B 88.075 587 62 7 1 585 579735502 579736082 0.000000e+00 689.0
15 TraesCS3A01G405500 chr4B 88.406 69 6 1 1006 1074 525543749 525543683 9.880000e-12 82.4
16 TraesCS3A01G405500 chr4D 87.189 562 70 2 10 571 477555060 477554501 4.670000e-179 638.0
17 TraesCS3A01G405500 chr4D 86.822 129 15 2 947 1074 306378727 306378854 4.470000e-30 143.0
18 TraesCS3A01G405500 chr1B 86.441 590 71 8 1 585 413789522 413788937 4.670000e-179 638.0
19 TraesCS3A01G405500 chr7A 86.562 573 73 4 1 572 13341435 13340866 2.810000e-176 628.0
20 TraesCS3A01G405500 chr7A 84.768 151 23 0 3596 3746 467424536 467424386 7.420000e-33 152.0
21 TraesCS3A01G405500 chr7A 84.106 151 24 0 3596 3746 467855779 467855629 3.450000e-31 147.0
22 TraesCS3A01G405500 chr5D 86.435 575 72 5 1 572 534087670 534087099 3.640000e-175 625.0
23 TraesCS3A01G405500 chr5D 86.340 571 74 4 1 570 376719510 376720077 1.690000e-173 619.0
24 TraesCS3A01G405500 chr5D 89.474 133 14 0 3596 3728 299073581 299073449 7.370000e-38 169.0
25 TraesCS3A01G405500 chr1D 86.213 573 75 4 1 572 191378773 191378204 6.090000e-173 617.0
26 TraesCS3A01G405500 chr1A 90.672 268 21 4 1559 1823 2825227 2825493 1.900000e-93 353.0
27 TraesCS3A01G405500 chr1A 90.698 172 14 2 966 1136 236713653 236713483 1.200000e-55 228.0
28 TraesCS3A01G405500 chr1A 89.404 151 16 0 3596 3746 91103481 91103631 1.570000e-44 191.0
29 TraesCS3A01G405500 chr6D 87.845 181 9 6 1645 1823 472404656 472404825 2.610000e-47 200.0
30 TraesCS3A01G405500 chr6A 89.404 151 16 0 3596 3746 153373069 153372919 1.570000e-44 191.0
31 TraesCS3A01G405500 chr2D 88.742 151 17 0 3596 3746 192995281 192995131 7.320000e-43 185.0
32 TraesCS3A01G405500 chr2A 88.742 151 17 0 3596 3746 206855010 206854860 7.320000e-43 185.0
33 TraesCS3A01G405500 chr2B 87.417 151 17 2 3596 3746 249209376 249209228 5.700000e-39 172.0
34 TraesCS3A01G405500 chr6B 87.218 133 15 1 3614 3746 668910713 668910843 2.670000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G405500 chr3A 649939353 649943637 4284 True 7914.000000 7914 100.000000 1 4285 1 chr3A.!!$R1 4284
1 TraesCS3A01G405500 chr3D 515676431 515679938 3507 True 1505.333333 4117 84.647667 708 4285 3 chr3D.!!$R1 3577
2 TraesCS3A01G405500 chr3D 22919374 22920219 845 False 465.500000 676 88.844000 948 1823 2 chr3D.!!$F1 875
3 TraesCS3A01G405500 chr3B 678171320 678175838 4518 True 928.500000 2043 85.131500 663 4285 4 chr3B.!!$R1 3622
4 TraesCS3A01G405500 chr7D 14769929 14770512 583 True 719.000000 719 88.889000 1 585 1 chr7D.!!$R1 584
5 TraesCS3A01G405500 chr7D 532621464 532622040 576 False 625.000000 625 86.254000 1 580 1 chr7D.!!$F1 579
6 TraesCS3A01G405500 chr7D 22382042 22382879 837 False 441.000000 662 87.008500 947 1811 2 chr7D.!!$F2 864
7 TraesCS3A01G405500 chr4B 579735502 579736082 580 False 689.000000 689 88.075000 1 585 1 chr4B.!!$F1 584
8 TraesCS3A01G405500 chr4D 477554501 477555060 559 True 638.000000 638 87.189000 10 571 1 chr4D.!!$R1 561
9 TraesCS3A01G405500 chr1B 413788937 413789522 585 True 638.000000 638 86.441000 1 585 1 chr1B.!!$R1 584
10 TraesCS3A01G405500 chr7A 13340866 13341435 569 True 628.000000 628 86.562000 1 572 1 chr7A.!!$R1 571
11 TraesCS3A01G405500 chr5D 534087099 534087670 571 True 625.000000 625 86.435000 1 572 1 chr5D.!!$R2 571
12 TraesCS3A01G405500 chr5D 376719510 376720077 567 False 619.000000 619 86.340000 1 570 1 chr5D.!!$F1 569
13 TraesCS3A01G405500 chr1D 191378204 191378773 569 True 617.000000 617 86.213000 1 572 1 chr1D.!!$R1 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
586 592 0.981183 TGTGGGCGTTATCAGGACTT 59.019 50.000 0.0 0.0 0.00 3.01 F
1428 1473 0.242825 TGTAGTCTGTACCACGCAGC 59.757 55.000 0.0 0.0 34.21 5.25 F
2621 3654 1.741706 AGCCAAAGATTCATGCTGACG 59.258 47.619 0.0 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2576 3609 0.112412 AGGGGGCACGTGAAAATCTT 59.888 50.0 22.23 0.0 0.00 2.40 R
3204 4251 0.753867 TACAGGTCGTCAGCAACCAA 59.246 50.0 0.00 0.0 38.06 3.67 R
3950 5130 0.035915 TGCCGATCGTTGGGAATTCA 60.036 50.0 15.09 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 84 1.625759 CTGCAGTTGCGCGTATGTGA 61.626 55.000 8.43 0.00 45.83 3.58
107 110 8.044060 ACAACCAGATAAACACATATGACAAG 57.956 34.615 10.38 0.00 0.00 3.16
165 169 3.568007 ACACGTGGCAACTATTGTTTGAT 59.432 39.130 21.57 0.00 33.52 2.57
325 329 6.055588 CCCGGATAACTACATCTGTCATTTT 58.944 40.000 0.73 0.00 30.52 1.82
330 334 9.778741 GGATAACTACATCTGTCATTTTGGATA 57.221 33.333 0.00 0.00 0.00 2.59
336 340 7.523293 ACATCTGTCATTTTGGATAACAACA 57.477 32.000 0.00 0.00 39.19 3.33
379 383 4.435436 CGTAGCTGCGCCAGGACA 62.435 66.667 12.24 0.00 31.21 4.02
386 390 4.722700 GCGCCAGGACATGTGGGT 62.723 66.667 1.15 0.00 35.39 4.51
399 403 3.315191 ACATGTGGGTATATTTGCTTCGC 59.685 43.478 0.00 0.00 0.00 4.70
508 512 1.138069 CGCCCACACATAGTCCATGTA 59.862 52.381 0.00 0.00 46.47 2.29
511 515 2.771943 CCCACACATAGTCCATGTAGGT 59.228 50.000 0.00 0.00 46.47 3.08
585 591 1.134401 CATGTGGGCGTTATCAGGACT 60.134 52.381 0.00 0.00 0.00 3.85
586 592 0.981183 TGTGGGCGTTATCAGGACTT 59.019 50.000 0.00 0.00 0.00 3.01
587 593 1.349688 TGTGGGCGTTATCAGGACTTT 59.650 47.619 0.00 0.00 0.00 2.66
588 594 2.224670 TGTGGGCGTTATCAGGACTTTT 60.225 45.455 0.00 0.00 0.00 2.27
589 595 2.817844 GTGGGCGTTATCAGGACTTTTT 59.182 45.455 0.00 0.00 0.00 1.94
614 620 8.658499 TTTTAAGAAAGACAACACTCCTACTC 57.342 34.615 0.00 0.00 0.00 2.59
615 621 7.598759 TTAAGAAAGACAACACTCCTACTCT 57.401 36.000 0.00 0.00 0.00 3.24
616 622 5.715434 AGAAAGACAACACTCCTACTCTC 57.285 43.478 0.00 0.00 0.00 3.20
617 623 5.390387 AGAAAGACAACACTCCTACTCTCT 58.610 41.667 0.00 0.00 0.00 3.10
618 624 5.475564 AGAAAGACAACACTCCTACTCTCTC 59.524 44.000 0.00 0.00 0.00 3.20
619 625 4.650972 AGACAACACTCCTACTCTCTCT 57.349 45.455 0.00 0.00 0.00 3.10
620 626 4.585879 AGACAACACTCCTACTCTCTCTC 58.414 47.826 0.00 0.00 0.00 3.20
621 627 4.288626 AGACAACACTCCTACTCTCTCTCT 59.711 45.833 0.00 0.00 0.00 3.10
622 628 4.585879 ACAACACTCCTACTCTCTCTCTC 58.414 47.826 0.00 0.00 0.00 3.20
623 629 4.288626 ACAACACTCCTACTCTCTCTCTCT 59.711 45.833 0.00 0.00 0.00 3.10
624 630 5.222048 ACAACACTCCTACTCTCTCTCTCTT 60.222 44.000 0.00 0.00 0.00 2.85
625 631 5.514500 ACACTCCTACTCTCTCTCTCTTT 57.486 43.478 0.00 0.00 0.00 2.52
626 632 5.887754 ACACTCCTACTCTCTCTCTCTTTT 58.112 41.667 0.00 0.00 0.00 2.27
627 633 5.944007 ACACTCCTACTCTCTCTCTCTTTTC 59.056 44.000 0.00 0.00 0.00 2.29
628 634 6.180472 CACTCCTACTCTCTCTCTCTTTTCT 58.820 44.000 0.00 0.00 0.00 2.52
629 635 6.659242 CACTCCTACTCTCTCTCTCTTTTCTT 59.341 42.308 0.00 0.00 0.00 2.52
630 636 7.176690 CACTCCTACTCTCTCTCTCTTTTCTTT 59.823 40.741 0.00 0.00 0.00 2.52
631 637 7.728532 ACTCCTACTCTCTCTCTCTTTTCTTTT 59.271 37.037 0.00 0.00 0.00 2.27
632 638 7.891561 TCCTACTCTCTCTCTCTTTTCTTTTG 58.108 38.462 0.00 0.00 0.00 2.44
633 639 7.039363 TCCTACTCTCTCTCTCTTTTCTTTTGG 60.039 40.741 0.00 0.00 0.00 3.28
634 640 6.739331 ACTCTCTCTCTCTTTTCTTTTGGA 57.261 37.500 0.00 0.00 0.00 3.53
635 641 6.758254 ACTCTCTCTCTCTTTTCTTTTGGAG 58.242 40.000 0.00 0.00 0.00 3.86
636 642 6.326323 ACTCTCTCTCTCTTTTCTTTTGGAGT 59.674 38.462 0.00 0.00 0.00 3.85
637 643 6.520272 TCTCTCTCTCTTTTCTTTTGGAGTG 58.480 40.000 0.00 0.00 0.00 3.51
638 644 5.615289 TCTCTCTCTTTTCTTTTGGAGTGG 58.385 41.667 0.00 0.00 0.00 4.00
639 645 5.366768 TCTCTCTCTTTTCTTTTGGAGTGGA 59.633 40.000 0.00 0.00 0.00 4.02
640 646 5.368989 TCTCTCTTTTCTTTTGGAGTGGAC 58.631 41.667 0.00 0.00 0.00 4.02
641 647 5.104527 TCTCTCTTTTCTTTTGGAGTGGACA 60.105 40.000 0.00 0.00 0.00 4.02
642 648 4.881850 TCTCTTTTCTTTTGGAGTGGACAC 59.118 41.667 0.00 0.00 0.00 3.67
643 649 4.855340 TCTTTTCTTTTGGAGTGGACACT 58.145 39.130 4.35 4.35 45.84 3.55
655 661 4.601406 AGTGGACACTCCTATTCTCTCT 57.399 45.455 0.00 0.00 36.92 3.10
656 662 4.532834 AGTGGACACTCCTATTCTCTCTC 58.467 47.826 0.00 0.00 36.92 3.20
657 663 4.229582 AGTGGACACTCCTATTCTCTCTCT 59.770 45.833 0.00 0.00 36.92 3.10
658 664 4.338118 GTGGACACTCCTATTCTCTCTCTG 59.662 50.000 0.00 0.00 37.46 3.35
659 665 4.017958 TGGACACTCCTATTCTCTCTCTGT 60.018 45.833 0.00 0.00 37.46 3.41
660 666 4.578928 GGACACTCCTATTCTCTCTCTGTC 59.421 50.000 0.00 0.00 32.53 3.51
661 667 5.437060 GACACTCCTATTCTCTCTCTGTCT 58.563 45.833 0.00 0.00 0.00 3.41
665 671 6.260936 CACTCCTATTCTCTCTCTGTCTTCTC 59.739 46.154 0.00 0.00 0.00 2.87
818 829 1.432270 GCGATTTTGCCTCCTCCTCG 61.432 60.000 0.00 0.00 0.00 4.63
861 872 2.654877 CCACCGCCGTACAAGTCT 59.345 61.111 0.00 0.00 0.00 3.24
897 908 4.133373 CTCCCCTCCCCGTCCGTA 62.133 72.222 0.00 0.00 0.00 4.02
907 918 2.823147 CGTCCGTACTCGCCCTCT 60.823 66.667 0.00 0.00 35.54 3.69
1193 1207 0.832135 ACCCCTTCTCGCTTCACTGA 60.832 55.000 0.00 0.00 0.00 3.41
1202 1216 4.010349 TCTCGCTTCACTGACTCTATTGA 58.990 43.478 0.00 0.00 0.00 2.57
1337 1353 1.493446 TCGCTCTACCAGATGGACCTA 59.507 52.381 5.72 0.00 38.94 3.08
1373 1396 2.553727 GCTCCGCTCCTACCTACGG 61.554 68.421 0.00 0.00 46.97 4.02
1422 1467 4.635699 TCAGTCTCTGTAGTCTGTACCA 57.364 45.455 0.00 0.00 39.19 3.25
1428 1473 0.242825 TGTAGTCTGTACCACGCAGC 59.757 55.000 0.00 0.00 34.21 5.25
1640 1685 3.020274 TGCTTGTTTTGTGGCTGAAGTA 58.980 40.909 0.00 0.00 0.00 2.24
1870 1920 5.303971 AGCTTCAGCCATTACATAAGCTAG 58.696 41.667 5.63 0.00 45.67 3.42
1941 1994 8.238631 TGTATCACATGTTGACATTTCATTCAG 58.761 33.333 0.00 0.00 36.92 3.02
1997 2050 4.908601 TCAGGGTATCACTGACAAACAT 57.091 40.909 0.00 0.00 39.87 2.71
1998 2051 4.578871 TCAGGGTATCACTGACAAACATG 58.421 43.478 0.00 0.00 39.87 3.21
1999 2052 4.285775 TCAGGGTATCACTGACAAACATGA 59.714 41.667 0.00 0.00 39.87 3.07
2015 2068 4.503741 ACATGAAACATGCACCTACAAC 57.496 40.909 0.00 0.00 0.00 3.32
2415 3448 7.703298 TCTGATGCAATTTGAAAGTGAAAAG 57.297 32.000 9.77 1.69 0.00 2.27
2479 3512 2.915738 AGTTACAGAGCCGTAAGACG 57.084 50.000 0.00 0.00 42.11 4.18
2588 3621 9.360093 CTAAGATTAGTCAGAAGATTTTCACGT 57.640 33.333 0.00 0.00 35.70 4.49
2590 3623 5.591643 TTAGTCAGAAGATTTTCACGTGC 57.408 39.130 11.67 0.00 35.70 5.34
2621 3654 1.741706 AGCCAAAGATTCATGCTGACG 59.258 47.619 0.00 0.00 0.00 4.35
2726 3762 7.110155 CCTACCAGTCAGTAATAACCAACAAT 58.890 38.462 0.00 0.00 0.00 2.71
2758 3794 4.202161 ACGTTATGGAGCTGATTCAGTAGG 60.202 45.833 14.90 0.00 33.43 3.18
2791 3838 1.751437 AGGCATTAGCGAGAAAACCC 58.249 50.000 0.00 0.00 43.41 4.11
2823 3870 4.829064 TTTCAACAAGTGCCATGAGTAC 57.171 40.909 0.00 0.00 0.00 2.73
3204 4251 1.636003 GAGGGGAGGAAGTTGTGGATT 59.364 52.381 0.00 0.00 0.00 3.01
3215 4262 2.362077 AGTTGTGGATTTGGTTGCTGAC 59.638 45.455 0.00 0.00 0.00 3.51
3294 4343 4.009675 TGACCTTATTTGATGTGAGCCAC 58.990 43.478 0.00 0.00 34.56 5.01
3311 4360 3.837213 CCACAAGGCAGTATCAAACAG 57.163 47.619 0.00 0.00 0.00 3.16
3313 4362 4.012374 CCACAAGGCAGTATCAAACAGAT 58.988 43.478 0.00 0.00 40.86 2.90
3314 4363 4.460382 CCACAAGGCAGTATCAAACAGATT 59.540 41.667 0.00 0.00 38.19 2.40
3315 4364 5.647658 CCACAAGGCAGTATCAAACAGATTA 59.352 40.000 0.00 0.00 38.19 1.75
3317 4366 7.412853 CACAAGGCAGTATCAAACAGATTATC 58.587 38.462 0.00 0.00 38.19 1.75
3318 4367 7.066163 CACAAGGCAGTATCAAACAGATTATCA 59.934 37.037 0.00 0.00 38.19 2.15
3319 4368 7.611467 ACAAGGCAGTATCAAACAGATTATCAA 59.389 33.333 0.00 0.00 38.19 2.57
3320 4369 8.627403 CAAGGCAGTATCAAACAGATTATCAAT 58.373 33.333 0.00 0.00 38.19 2.57
3321 4370 8.388484 AGGCAGTATCAAACAGATTATCAATC 57.612 34.615 0.00 0.00 38.19 2.67
3322 4371 7.446625 AGGCAGTATCAAACAGATTATCAATCC 59.553 37.037 0.00 0.00 38.71 3.01
3323 4372 7.446625 GGCAGTATCAAACAGATTATCAATCCT 59.553 37.037 0.00 0.00 38.71 3.24
3324 4373 8.502387 GCAGTATCAAACAGATTATCAATCCTC 58.498 37.037 0.00 0.00 38.71 3.71
3325 4374 9.551734 CAGTATCAAACAGATTATCAATCCTCA 57.448 33.333 0.00 0.00 38.71 3.86
3332 4407 5.128205 CAGATTATCAATCCTCAGTGCCAA 58.872 41.667 0.00 0.00 38.71 4.52
3349 4424 5.047519 AGTGCCAAAATCTTCTGAATTCCTG 60.048 40.000 2.27 0.00 0.00 3.86
3367 4525 5.099042 TCCTGGTAAGGTAGAAATGAAGC 57.901 43.478 0.00 0.00 44.82 3.86
3373 4531 3.695830 AGGTAGAAATGAAGCGGTTCA 57.304 42.857 30.00 30.00 46.81 3.18
3377 4535 5.095490 GGTAGAAATGAAGCGGTTCAAATG 58.905 41.667 31.27 0.00 45.88 2.32
3387 4545 2.095919 GCGGTTCAAATGTGTGTACTCC 60.096 50.000 0.00 0.00 0.00 3.85
3392 4550 5.473504 GGTTCAAATGTGTGTACTCCAGAAT 59.526 40.000 0.00 0.00 0.00 2.40
3395 4553 6.295249 TCAAATGTGTGTACTCCAGAATGAA 58.705 36.000 0.00 0.00 39.69 2.57
3396 4554 6.942005 TCAAATGTGTGTACTCCAGAATGAAT 59.058 34.615 0.00 0.00 39.69 2.57
3397 4555 7.448161 TCAAATGTGTGTACTCCAGAATGAATT 59.552 33.333 0.00 0.00 39.69 2.17
3398 4556 6.992063 ATGTGTGTACTCCAGAATGAATTC 57.008 37.500 0.00 0.00 39.69 2.17
3399 4557 5.245531 TGTGTGTACTCCAGAATGAATTCC 58.754 41.667 2.27 0.00 39.69 3.01
3401 4559 4.020573 TGTGTACTCCAGAATGAATTCCGT 60.021 41.667 2.27 0.00 39.69 4.69
3403 4561 6.103997 GTGTACTCCAGAATGAATTCCGTTA 58.896 40.000 2.27 0.00 39.69 3.18
3404 4562 6.255887 GTGTACTCCAGAATGAATTCCGTTAG 59.744 42.308 2.27 0.00 39.69 2.34
3407 4565 5.023533 TCCAGAATGAATTCCGTTAGGAG 57.976 43.478 2.27 0.00 44.13 3.69
3408 4566 4.714802 TCCAGAATGAATTCCGTTAGGAGA 59.285 41.667 2.27 0.00 44.13 3.71
3409 4567 5.188948 TCCAGAATGAATTCCGTTAGGAGAA 59.811 40.000 2.27 0.00 44.13 2.87
3410 4568 5.294552 CCAGAATGAATTCCGTTAGGAGAAC 59.705 44.000 2.27 0.00 44.13 3.01
3412 4570 6.036517 CAGAATGAATTCCGTTAGGAGAACAG 59.963 42.308 2.27 0.00 44.13 3.16
3413 4571 8.058698 CAGAATGAATTCCGTTAGGAGAACAGA 61.059 40.741 2.27 0.00 44.13 3.41
3416 4574 1.171308 TCCGTTAGGAGAACAGACCG 58.829 55.000 0.00 0.00 42.75 4.79
3503 4682 4.787551 TGTTGTTGATAAGGTCACCAGTT 58.212 39.130 0.00 0.00 36.32 3.16
3504 4683 5.931294 TGTTGTTGATAAGGTCACCAGTTA 58.069 37.500 0.00 0.00 36.32 2.24
3506 4685 6.653320 TGTTGTTGATAAGGTCACCAGTTATC 59.347 38.462 8.35 8.35 36.32 1.75
3507 4686 6.620877 TGTTGATAAGGTCACCAGTTATCT 57.379 37.500 14.13 0.00 36.32 1.98
3508 4687 6.640518 TGTTGATAAGGTCACCAGTTATCTC 58.359 40.000 14.13 9.40 36.32 2.75
3515 4694 4.597507 AGGTCACCAGTTATCTCCAAAAGA 59.402 41.667 0.00 0.00 38.72 2.52
3520 4699 8.360390 GTCACCAGTTATCTCCAAAAGATTTTT 58.640 33.333 0.00 0.00 42.30 1.94
3560 4740 0.111061 TCAGCATCAACCAACCAGCT 59.889 50.000 0.00 0.00 0.00 4.24
3595 4775 6.502136 TTCGGCAGTGATCTATCTACATAG 57.498 41.667 0.00 0.00 34.24 2.23
3598 4778 6.372937 TCGGCAGTGATCTATCTACATAGAAG 59.627 42.308 0.00 0.00 43.55 2.85
3599 4779 6.404184 CGGCAGTGATCTATCTACATAGAAGG 60.404 46.154 0.00 0.00 43.55 3.46
3600 4780 6.127479 GGCAGTGATCTATCTACATAGAAGGG 60.127 46.154 0.00 0.00 43.55 3.95
3603 4783 7.339212 CAGTGATCTATCTACATAGAAGGGGAG 59.661 44.444 0.00 0.00 43.55 4.30
3604 4784 6.096282 GTGATCTATCTACATAGAAGGGGAGC 59.904 46.154 0.00 0.00 43.55 4.70
3605 4785 4.936802 TCTATCTACATAGAAGGGGAGCC 58.063 47.826 0.00 0.00 38.48 4.70
3606 4786 3.933239 ATCTACATAGAAGGGGAGCCT 57.067 47.619 0.00 0.00 35.69 4.58
3607 4787 3.708236 TCTACATAGAAGGGGAGCCTT 57.292 47.619 0.00 0.00 0.00 4.35
3608 4788 3.309296 TCTACATAGAAGGGGAGCCTTG 58.691 50.000 0.00 0.00 0.00 3.61
3609 4789 1.216990 ACATAGAAGGGGAGCCTTGG 58.783 55.000 0.00 0.00 0.00 3.61
3610 4790 0.179006 CATAGAAGGGGAGCCTTGGC 60.179 60.000 2.97 2.97 0.00 4.52
3611 4791 1.700042 ATAGAAGGGGAGCCTTGGCG 61.700 60.000 5.95 0.00 0.00 5.69
3619 4799 4.323477 AGCCTTGGCGCAACGGTA 62.323 61.111 10.83 0.00 0.00 4.02
3620 4800 3.358707 GCCTTGGCGCAACGGTAA 61.359 61.111 10.83 0.00 0.00 2.85
3621 4801 2.910345 GCCTTGGCGCAACGGTAAA 61.910 57.895 10.83 0.00 0.00 2.01
3622 4802 1.209127 CCTTGGCGCAACGGTAAAG 59.791 57.895 10.83 0.71 0.00 1.85
3623 4803 1.442017 CTTGGCGCAACGGTAAAGC 60.442 57.895 10.83 0.00 0.00 3.51
3624 4804 1.852067 CTTGGCGCAACGGTAAAGCT 61.852 55.000 10.83 0.00 0.00 3.74
3625 4805 2.123988 TTGGCGCAACGGTAAAGCTG 62.124 55.000 10.83 0.00 0.00 4.24
3626 4806 2.613506 GGCGCAACGGTAAAGCTGT 61.614 57.895 10.83 0.00 38.60 4.40
3627 4807 1.281656 GCGCAACGGTAAAGCTGTT 59.718 52.632 0.30 0.00 46.91 3.16
3631 4811 3.414486 AACGGTAAAGCTGTTGCCT 57.586 47.368 11.70 0.88 44.44 4.75
3632 4812 1.687563 AACGGTAAAGCTGTTGCCTT 58.312 45.000 11.70 2.94 44.44 4.35
3633 4813 0.951558 ACGGTAAAGCTGTTGCCTTG 59.048 50.000 11.70 3.29 40.80 3.61
3634 4814 0.951558 CGGTAAAGCTGTTGCCTTGT 59.048 50.000 11.70 0.00 40.80 3.16
3635 4815 1.334960 CGGTAAAGCTGTTGCCTTGTG 60.335 52.381 11.70 0.00 40.80 3.33
3636 4816 1.953686 GGTAAAGCTGTTGCCTTGTGA 59.046 47.619 7.98 0.00 40.80 3.58
3637 4817 2.287608 GGTAAAGCTGTTGCCTTGTGAC 60.288 50.000 7.98 0.00 40.80 3.67
3638 4818 0.746659 AAAGCTGTTGCCTTGTGACC 59.253 50.000 0.00 0.00 40.80 4.02
3639 4819 0.395586 AAGCTGTTGCCTTGTGACCA 60.396 50.000 0.00 0.00 40.80 4.02
3640 4820 0.178981 AGCTGTTGCCTTGTGACCAT 60.179 50.000 0.00 0.00 40.80 3.55
3641 4821 0.242017 GCTGTTGCCTTGTGACCATC 59.758 55.000 0.00 0.00 0.00 3.51
3642 4822 1.608055 CTGTTGCCTTGTGACCATCA 58.392 50.000 0.00 0.00 0.00 3.07
3643 4823 1.538512 CTGTTGCCTTGTGACCATCAG 59.461 52.381 0.00 0.00 0.00 2.90
3644 4824 0.883833 GTTGCCTTGTGACCATCAGG 59.116 55.000 0.00 0.00 42.21 3.86
3656 4836 2.455674 CCATCAGGTCACGAGTTTGA 57.544 50.000 0.00 0.00 0.00 2.69
3657 4837 2.341257 CCATCAGGTCACGAGTTTGAG 58.659 52.381 0.00 0.00 0.00 3.02
3658 4838 2.289072 CCATCAGGTCACGAGTTTGAGT 60.289 50.000 0.00 0.00 0.00 3.41
3659 4839 3.393800 CATCAGGTCACGAGTTTGAGTT 58.606 45.455 0.00 0.00 0.00 3.01
3660 4840 3.093717 TCAGGTCACGAGTTTGAGTTC 57.906 47.619 0.00 0.00 0.00 3.01
3661 4841 2.693591 TCAGGTCACGAGTTTGAGTTCT 59.306 45.455 0.00 0.00 0.00 3.01
3662 4842 2.797156 CAGGTCACGAGTTTGAGTTCTG 59.203 50.000 0.00 0.00 0.00 3.02
3663 4843 2.135933 GGTCACGAGTTTGAGTTCTGG 58.864 52.381 0.00 0.00 0.00 3.86
3664 4844 2.223971 GGTCACGAGTTTGAGTTCTGGA 60.224 50.000 0.00 0.00 0.00 3.86
3665 4845 3.454375 GTCACGAGTTTGAGTTCTGGAA 58.546 45.455 0.00 0.00 0.00 3.53
3666 4846 3.491267 GTCACGAGTTTGAGTTCTGGAAG 59.509 47.826 0.00 0.00 0.00 3.46
3667 4847 2.221981 CACGAGTTTGAGTTCTGGAAGC 59.778 50.000 0.00 0.00 0.00 3.86
3668 4848 2.158957 ACGAGTTTGAGTTCTGGAAGCA 60.159 45.455 0.00 0.00 0.00 3.91
3669 4849 2.478134 CGAGTTTGAGTTCTGGAAGCAG 59.522 50.000 0.00 0.00 0.00 4.24
3670 4850 2.225255 GAGTTTGAGTTCTGGAAGCAGC 59.775 50.000 0.00 0.00 0.00 5.25
3671 4851 1.268079 GTTTGAGTTCTGGAAGCAGCC 59.732 52.381 0.00 0.00 0.00 4.85
3672 4852 0.767375 TTGAGTTCTGGAAGCAGCCT 59.233 50.000 0.00 0.00 0.00 4.58
3673 4853 0.322975 TGAGTTCTGGAAGCAGCCTC 59.677 55.000 0.00 0.00 0.00 4.70
3674 4854 0.612744 GAGTTCTGGAAGCAGCCTCT 59.387 55.000 0.00 0.00 0.00 3.69
3675 4855 1.827969 GAGTTCTGGAAGCAGCCTCTA 59.172 52.381 0.00 0.00 0.00 2.43
3676 4856 2.234908 GAGTTCTGGAAGCAGCCTCTAA 59.765 50.000 0.00 0.00 0.00 2.10
3677 4857 2.027653 AGTTCTGGAAGCAGCCTCTAAC 60.028 50.000 0.00 0.00 0.00 2.34
3678 4858 1.644509 TCTGGAAGCAGCCTCTAACA 58.355 50.000 0.00 0.00 0.00 2.41
3679 4859 1.552337 TCTGGAAGCAGCCTCTAACAG 59.448 52.381 0.00 0.00 0.00 3.16
3680 4860 1.552337 CTGGAAGCAGCCTCTAACAGA 59.448 52.381 0.00 0.00 0.00 3.41
3681 4861 1.977854 TGGAAGCAGCCTCTAACAGAA 59.022 47.619 0.00 0.00 0.00 3.02
3682 4862 2.371841 TGGAAGCAGCCTCTAACAGAAA 59.628 45.455 0.00 0.00 0.00 2.52
3683 4863 3.009473 TGGAAGCAGCCTCTAACAGAAAT 59.991 43.478 0.00 0.00 0.00 2.17
3684 4864 3.376546 GGAAGCAGCCTCTAACAGAAATG 59.623 47.826 0.00 0.00 0.00 2.32
3685 4865 3.710209 AGCAGCCTCTAACAGAAATGT 57.290 42.857 0.00 0.00 0.00 2.71
3686 4866 4.826274 AGCAGCCTCTAACAGAAATGTA 57.174 40.909 0.00 0.00 0.00 2.29
3687 4867 4.764172 AGCAGCCTCTAACAGAAATGTAG 58.236 43.478 0.00 0.00 0.00 2.74
3688 4868 3.873952 GCAGCCTCTAACAGAAATGTAGG 59.126 47.826 0.00 0.00 0.00 3.18
3689 4869 4.446371 CAGCCTCTAACAGAAATGTAGGG 58.554 47.826 0.00 0.00 0.00 3.53
3690 4870 4.162320 CAGCCTCTAACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
3691 4871 4.783227 AGCCTCTAACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
3692 4872 5.250774 AGCCTCTAACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
3693 4873 5.586643 GCCTCTAACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
3694 4874 6.576442 GCCTCTAACAGAAATGTAGGGAAAGA 60.576 42.308 0.00 0.00 0.00 2.52
3695 4875 6.819146 CCTCTAACAGAAATGTAGGGAAAGAC 59.181 42.308 0.00 0.00 0.00 3.01
3696 4876 7.310734 CCTCTAACAGAAATGTAGGGAAAGACT 60.311 40.741 0.00 0.00 0.00 3.24
3697 4877 7.386851 TCTAACAGAAATGTAGGGAAAGACTG 58.613 38.462 0.00 0.00 0.00 3.51
3698 4878 4.327680 ACAGAAATGTAGGGAAAGACTGC 58.672 43.478 0.00 0.00 0.00 4.40
3699 4879 3.691609 CAGAAATGTAGGGAAAGACTGCC 59.308 47.826 0.00 0.00 35.18 4.85
3701 4881 4.783227 AGAAATGTAGGGAAAGACTGCCTA 59.217 41.667 0.00 0.00 45.85 3.93
3708 4888 5.405063 AGGGAAAGACTGCCTACTATAGA 57.595 43.478 6.78 0.00 45.85 1.98
3709 4889 5.971493 AGGGAAAGACTGCCTACTATAGAT 58.029 41.667 6.78 0.00 45.85 1.98
3710 4890 6.014012 AGGGAAAGACTGCCTACTATAGATC 58.986 44.000 6.78 0.00 45.85 2.75
3711 4891 5.186215 GGGAAAGACTGCCTACTATAGATCC 59.814 48.000 6.78 0.00 31.27 3.36
3712 4892 5.775701 GGAAAGACTGCCTACTATAGATCCA 59.224 44.000 6.78 0.00 0.00 3.41
3713 4893 6.267928 GGAAAGACTGCCTACTATAGATCCAA 59.732 42.308 6.78 0.00 0.00 3.53
3714 4894 7.202011 GGAAAGACTGCCTACTATAGATCCAAA 60.202 40.741 6.78 0.00 0.00 3.28
3715 4895 6.909550 AGACTGCCTACTATAGATCCAAAG 57.090 41.667 6.78 0.00 0.00 2.77
3716 4896 6.377912 AGACTGCCTACTATAGATCCAAAGT 58.622 40.000 6.78 2.92 0.00 2.66
3717 4897 6.266558 AGACTGCCTACTATAGATCCAAAGTG 59.733 42.308 6.78 0.00 0.00 3.16
3718 4898 5.305644 ACTGCCTACTATAGATCCAAAGTGG 59.694 44.000 6.78 0.00 39.43 4.00
3719 4899 5.216622 TGCCTACTATAGATCCAAAGTGGT 58.783 41.667 6.78 0.00 39.03 4.16
3720 4900 5.665812 TGCCTACTATAGATCCAAAGTGGTT 59.334 40.000 6.78 0.00 39.03 3.67
3721 4901 6.842280 TGCCTACTATAGATCCAAAGTGGTTA 59.158 38.462 6.78 0.00 39.03 2.85
3722 4902 7.015292 TGCCTACTATAGATCCAAAGTGGTTAG 59.985 40.741 6.78 0.00 39.03 2.34
3723 4903 7.232941 GCCTACTATAGATCCAAAGTGGTTAGA 59.767 40.741 6.78 0.00 39.03 2.10
3724 4904 8.578151 CCTACTATAGATCCAAAGTGGTTAGAC 58.422 40.741 6.78 0.00 39.03 2.59
3725 4905 7.362802 ACTATAGATCCAAAGTGGTTAGACC 57.637 40.000 6.78 0.00 39.03 3.85
3726 4906 5.632034 ATAGATCCAAAGTGGTTAGACCC 57.368 43.478 0.00 0.00 39.03 4.46
3727 4907 3.532102 AGATCCAAAGTGGTTAGACCCT 58.468 45.455 0.00 0.00 39.03 4.34
3728 4908 3.916989 AGATCCAAAGTGGTTAGACCCTT 59.083 43.478 0.00 0.00 39.03 3.95
3729 4909 4.354087 AGATCCAAAGTGGTTAGACCCTTT 59.646 41.667 7.38 7.38 38.45 3.11
3730 4910 4.094830 TCCAAAGTGGTTAGACCCTTTC 57.905 45.455 9.28 0.00 36.95 2.62
3731 4911 3.154710 CCAAAGTGGTTAGACCCTTTCC 58.845 50.000 9.28 0.00 36.95 3.13
3732 4912 3.181433 CCAAAGTGGTTAGACCCTTTCCT 60.181 47.826 9.28 0.00 36.95 3.36
3733 4913 3.790089 AAGTGGTTAGACCCTTTCCTG 57.210 47.619 0.00 0.00 37.50 3.86
3734 4914 1.985895 AGTGGTTAGACCCTTTCCTGG 59.014 52.381 0.00 0.00 37.50 4.45
3735 4915 1.982958 GTGGTTAGACCCTTTCCTGGA 59.017 52.381 0.00 0.00 37.50 3.86
3736 4916 1.982958 TGGTTAGACCCTTTCCTGGAC 59.017 52.381 0.00 0.00 37.50 4.02
3737 4917 1.281287 GGTTAGACCCTTTCCTGGACC 59.719 57.143 0.00 0.00 30.04 4.46
3738 4918 1.281287 GTTAGACCCTTTCCTGGACCC 59.719 57.143 0.00 0.00 0.00 4.46
3739 4919 0.797579 TAGACCCTTTCCTGGACCCT 59.202 55.000 0.00 0.00 0.00 4.34
3740 4920 0.842467 AGACCCTTTCCTGGACCCTG 60.842 60.000 0.00 0.00 0.00 4.45
3741 4921 2.356667 CCCTTTCCTGGACCCTGC 59.643 66.667 0.00 0.00 0.00 4.85
3742 4922 2.045926 CCTTTCCTGGACCCTGCG 60.046 66.667 0.00 0.00 0.00 5.18
3743 4923 2.747855 CTTTCCTGGACCCTGCGC 60.748 66.667 0.00 0.00 0.00 6.09
3744 4924 3.551496 CTTTCCTGGACCCTGCGCA 62.551 63.158 10.98 10.98 0.00 6.09
3745 4925 3.126703 TTTCCTGGACCCTGCGCAA 62.127 57.895 13.05 0.00 0.00 4.85
3746 4926 2.424842 TTTCCTGGACCCTGCGCAAT 62.425 55.000 13.05 0.00 0.00 3.56
3747 4927 1.558167 TTCCTGGACCCTGCGCAATA 61.558 55.000 13.05 0.00 0.00 1.90
3748 4928 1.819632 CCTGGACCCTGCGCAATAC 60.820 63.158 13.05 0.65 0.00 1.89
3749 4929 1.078497 CTGGACCCTGCGCAATACA 60.078 57.895 13.05 6.10 0.00 2.29
3750 4930 0.464373 CTGGACCCTGCGCAATACAT 60.464 55.000 13.05 0.00 0.00 2.29
3751 4931 0.833949 TGGACCCTGCGCAATACATA 59.166 50.000 13.05 0.00 0.00 2.29
3752 4932 1.226746 GGACCCTGCGCAATACATAC 58.773 55.000 13.05 0.00 0.00 2.39
3753 4933 1.474320 GGACCCTGCGCAATACATACA 60.474 52.381 13.05 0.00 0.00 2.29
3754 4934 2.285083 GACCCTGCGCAATACATACAA 58.715 47.619 13.05 0.00 0.00 2.41
3755 4935 2.680841 GACCCTGCGCAATACATACAAA 59.319 45.455 13.05 0.00 0.00 2.83
3756 4936 2.422127 ACCCTGCGCAATACATACAAAC 59.578 45.455 13.05 0.00 0.00 2.93
3757 4937 2.421775 CCCTGCGCAATACATACAAACA 59.578 45.455 13.05 0.00 0.00 2.83
3758 4938 3.487376 CCCTGCGCAATACATACAAACAG 60.487 47.826 13.05 0.00 0.00 3.16
3759 4939 3.373748 CCTGCGCAATACATACAAACAGA 59.626 43.478 13.05 0.00 0.00 3.41
3760 4940 4.142708 CCTGCGCAATACATACAAACAGAA 60.143 41.667 13.05 0.00 0.00 3.02
3761 4941 4.968626 TGCGCAATACATACAAACAGAAG 58.031 39.130 8.16 0.00 0.00 2.85
3762 4942 4.693095 TGCGCAATACATACAAACAGAAGA 59.307 37.500 8.16 0.00 0.00 2.87
3763 4943 5.180304 TGCGCAATACATACAAACAGAAGAA 59.820 36.000 8.16 0.00 0.00 2.52
3764 4944 6.083630 GCGCAATACATACAAACAGAAGAAA 58.916 36.000 0.30 0.00 0.00 2.52
3765 4945 6.249260 GCGCAATACATACAAACAGAAGAAAG 59.751 38.462 0.30 0.00 0.00 2.62
3766 4946 6.742718 CGCAATACATACAAACAGAAGAAAGG 59.257 38.462 0.00 0.00 0.00 3.11
3767 4947 7.360861 CGCAATACATACAAACAGAAGAAAGGA 60.361 37.037 0.00 0.00 0.00 3.36
3768 4948 7.965107 GCAATACATACAAACAGAAGAAAGGAG 59.035 37.037 0.00 0.00 0.00 3.69
3769 4949 9.219603 CAATACATACAAACAGAAGAAAGGAGA 57.780 33.333 0.00 0.00 0.00 3.71
3770 4950 8.779354 ATACATACAAACAGAAGAAAGGAGAC 57.221 34.615 0.00 0.00 0.00 3.36
3771 4951 5.998363 ACATACAAACAGAAGAAAGGAGACC 59.002 40.000 0.00 0.00 0.00 3.85
3772 4952 4.503714 ACAAACAGAAGAAAGGAGACCA 57.496 40.909 0.00 0.00 0.00 4.02
3773 4953 4.855340 ACAAACAGAAGAAAGGAGACCAA 58.145 39.130 0.00 0.00 0.00 3.67
3774 4954 5.449553 ACAAACAGAAGAAAGGAGACCAAT 58.550 37.500 0.00 0.00 0.00 3.16
3775 4955 5.893824 ACAAACAGAAGAAAGGAGACCAATT 59.106 36.000 0.00 0.00 0.00 2.32
3776 4956 6.183360 ACAAACAGAAGAAAGGAGACCAATTG 60.183 38.462 0.00 0.00 0.00 2.32
3777 4957 3.823304 ACAGAAGAAAGGAGACCAATTGC 59.177 43.478 0.00 0.00 0.00 3.56
3778 4958 3.822735 CAGAAGAAAGGAGACCAATTGCA 59.177 43.478 0.00 0.00 0.00 4.08
3779 4959 4.461781 CAGAAGAAAGGAGACCAATTGCAT 59.538 41.667 0.00 0.00 0.00 3.96
3780 4960 5.047519 CAGAAGAAAGGAGACCAATTGCATT 60.048 40.000 0.00 0.00 0.00 3.56
3781 4961 4.796038 AGAAAGGAGACCAATTGCATTG 57.204 40.909 0.00 0.00 39.94 2.82
3829 5009 2.882927 ATTGCTGGCAATGCTGTATG 57.117 45.000 18.34 0.00 44.05 2.39
3830 5010 0.818938 TTGCTGGCAATGCTGTATGG 59.181 50.000 4.82 0.00 0.00 2.74
3831 5011 0.323633 TGCTGGCAATGCTGTATGGT 60.324 50.000 4.82 0.00 0.00 3.55
3832 5012 0.101759 GCTGGCAATGCTGTATGGTG 59.898 55.000 4.82 0.00 0.00 4.17
3833 5013 0.742505 CTGGCAATGCTGTATGGTGG 59.257 55.000 4.82 0.00 0.00 4.61
3834 5014 0.039472 TGGCAATGCTGTATGGTGGT 59.961 50.000 4.82 0.00 0.00 4.16
3835 5015 0.740737 GGCAATGCTGTATGGTGGTC 59.259 55.000 4.82 0.00 0.00 4.02
3836 5016 1.462616 GCAATGCTGTATGGTGGTCA 58.537 50.000 0.00 0.00 0.00 4.02
3837 5017 2.026641 GCAATGCTGTATGGTGGTCAT 58.973 47.619 0.00 0.00 39.78 3.06
3838 5018 2.428171 GCAATGCTGTATGGTGGTCATT 59.572 45.455 0.00 0.00 37.30 2.57
3839 5019 3.119029 GCAATGCTGTATGGTGGTCATTT 60.119 43.478 0.00 0.00 37.30 2.32
3840 5020 4.097741 GCAATGCTGTATGGTGGTCATTTA 59.902 41.667 0.00 0.00 37.30 1.40
3841 5021 5.394005 GCAATGCTGTATGGTGGTCATTTAA 60.394 40.000 0.00 0.00 37.30 1.52
3842 5022 6.629128 CAATGCTGTATGGTGGTCATTTAAA 58.371 36.000 0.00 0.00 37.30 1.52
3843 5023 6.849085 ATGCTGTATGGTGGTCATTTAAAA 57.151 33.333 0.00 0.00 37.30 1.52
3844 5024 6.019779 TGCTGTATGGTGGTCATTTAAAAC 57.980 37.500 0.00 0.00 37.30 2.43
3845 5025 5.772672 TGCTGTATGGTGGTCATTTAAAACT 59.227 36.000 0.00 0.00 37.30 2.66
3846 5026 6.943146 TGCTGTATGGTGGTCATTTAAAACTA 59.057 34.615 0.00 0.00 37.30 2.24
3847 5027 7.120579 TGCTGTATGGTGGTCATTTAAAACTAG 59.879 37.037 0.00 0.00 37.30 2.57
3848 5028 7.335924 GCTGTATGGTGGTCATTTAAAACTAGA 59.664 37.037 0.00 0.00 37.30 2.43
3849 5029 8.786826 TGTATGGTGGTCATTTAAAACTAGAG 57.213 34.615 0.00 0.00 37.30 2.43
3850 5030 8.598916 TGTATGGTGGTCATTTAAAACTAGAGA 58.401 33.333 0.00 0.00 37.30 3.10
3851 5031 9.614792 GTATGGTGGTCATTTAAAACTAGAGAT 57.385 33.333 0.00 0.00 37.30 2.75
3852 5032 8.738645 ATGGTGGTCATTTAAAACTAGAGATC 57.261 34.615 0.00 0.00 30.55 2.75
3853 5033 7.110155 TGGTGGTCATTTAAAACTAGAGATCC 58.890 38.462 0.00 0.00 0.00 3.36
3854 5034 6.542735 GGTGGTCATTTAAAACTAGAGATCCC 59.457 42.308 0.00 0.00 0.00 3.85
3855 5035 7.110155 GTGGTCATTTAAAACTAGAGATCCCA 58.890 38.462 0.00 0.00 0.00 4.37
3856 5036 7.610305 GTGGTCATTTAAAACTAGAGATCCCAA 59.390 37.037 0.00 0.00 0.00 4.12
3857 5037 8.336235 TGGTCATTTAAAACTAGAGATCCCAAT 58.664 33.333 0.00 0.00 0.00 3.16
3858 5038 8.624776 GGTCATTTAAAACTAGAGATCCCAATG 58.375 37.037 0.00 0.00 0.00 2.82
3865 5045 2.134789 AGAGATCCCAATGGTGCAAC 57.865 50.000 0.00 0.00 0.00 4.17
3890 5070 5.596361 TCCACCAAACTTTTGAAGCTCAATA 59.404 36.000 3.17 0.00 40.55 1.90
3898 5078 8.667076 AACTTTTGAAGCTCAATATTTGCTTT 57.333 26.923 20.04 9.32 45.56 3.51
3905 5085 7.710044 TGAAGCTCAATATTTGCTTTGACAAAA 59.290 29.630 20.04 0.00 45.56 2.44
3914 5094 6.415798 TTTGCTTTGACAAAAGTTTTAGCC 57.584 33.333 14.48 3.29 44.02 3.93
3924 5104 1.530323 AGTTTTAGCCGTTTCGCCAT 58.470 45.000 0.00 0.00 0.00 4.40
3935 5115 4.792704 GCCGTTTCGCCATAAAATGATGAT 60.793 41.667 0.00 0.00 0.00 2.45
3939 5119 3.073678 TCGCCATAAAATGATGATCCCG 58.926 45.455 0.00 0.00 0.00 5.14
3940 5120 2.813754 CGCCATAAAATGATGATCCCGT 59.186 45.455 0.00 0.00 0.00 5.28
3942 5122 3.820467 GCCATAAAATGATGATCCCGTGA 59.180 43.478 0.00 0.00 0.00 4.35
3943 5123 4.460382 GCCATAAAATGATGATCCCGTGAT 59.540 41.667 0.00 0.00 0.00 3.06
3944 5124 5.620654 GCCATAAAATGATGATCCCGTGATG 60.621 44.000 0.00 0.00 0.00 3.07
3945 5125 5.706833 CCATAAAATGATGATCCCGTGATGA 59.293 40.000 0.00 0.00 0.00 2.92
3946 5126 6.376299 CCATAAAATGATGATCCCGTGATGAT 59.624 38.462 0.00 0.00 0.00 2.45
3947 5127 7.094075 CCATAAAATGATGATCCCGTGATGATT 60.094 37.037 0.00 0.00 0.00 2.57
3948 5128 5.700722 AAATGATGATCCCGTGATGATTG 57.299 39.130 0.00 0.00 0.00 2.67
3949 5129 4.628963 ATGATGATCCCGTGATGATTGA 57.371 40.909 0.00 0.00 0.00 2.57
3950 5130 4.628963 TGATGATCCCGTGATGATTGAT 57.371 40.909 0.00 0.00 0.00 2.57
3951 5131 4.320870 TGATGATCCCGTGATGATTGATG 58.679 43.478 0.00 0.00 0.00 3.07
3952 5132 4.040706 TGATGATCCCGTGATGATTGATGA 59.959 41.667 0.00 0.00 0.00 2.92
3953 5133 4.420522 TGATCCCGTGATGATTGATGAA 57.579 40.909 0.00 0.00 0.00 2.57
3954 5134 4.976864 TGATCCCGTGATGATTGATGAAT 58.023 39.130 0.00 0.00 0.00 2.57
3963 5143 5.066375 GTGATGATTGATGAATTCCCAACGA 59.934 40.000 11.14 3.83 0.00 3.85
3967 5147 2.560504 TGATGAATTCCCAACGATCGG 58.439 47.619 20.98 1.81 0.00 4.18
3995 5175 2.015736 ACCGTGCTGCTGATTTAGAG 57.984 50.000 0.00 0.00 0.00 2.43
4032 5212 9.061610 GTACAAAAGAATTCCGTTGAATATGTG 57.938 33.333 20.10 5.18 40.34 3.21
4044 5224 2.287644 TGAATATGTGCCGCGATCAAAG 59.712 45.455 8.23 0.00 0.00 2.77
4062 5242 4.155733 TACTGACCCGCCGCCATG 62.156 66.667 0.00 0.00 0.00 3.66
4075 5255 4.477413 CCATGGCTGAGATGGCTC 57.523 61.111 0.00 0.00 41.67 4.70
4076 5256 1.597302 CCATGGCTGAGATGGCTCG 60.597 63.158 0.00 0.00 44.33 5.03
4077 5257 2.110627 ATGGCTGAGATGGCTCGC 59.889 61.111 0.00 0.00 44.33 5.03
4080 5260 4.212913 GCTGAGATGGCTCGCCGA 62.213 66.667 3.14 0.00 44.33 5.54
4117 5327 1.389445 GCTCGAGCAATCGCATATCAG 59.611 52.381 31.91 0.00 42.27 2.90
4121 5331 2.159867 CGAGCAATCGCATATCAGAAGC 60.160 50.000 0.00 0.00 42.27 3.86
4122 5332 2.804527 GAGCAATCGCATATCAGAAGCA 59.195 45.455 0.00 0.00 42.27 3.91
4123 5333 2.806818 AGCAATCGCATATCAGAAGCAG 59.193 45.455 0.00 0.00 42.27 4.24
4179 5389 4.170062 CGCTAGACGCCGAACCGA 62.170 66.667 0.00 0.00 34.21 4.69
4180 5390 2.578981 GCTAGACGCCGAACCGAC 60.579 66.667 0.00 0.00 0.00 4.79
4181 5391 3.048941 GCTAGACGCCGAACCGACT 62.049 63.158 0.00 0.00 37.10 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 84 7.665559 ACTTGTCATATGTGTTTATCTGGTTGT 59.334 33.333 1.90 0.00 0.00 3.32
133 137 2.970324 CCACGTGTGGTCCAACCG 60.970 66.667 15.65 9.32 45.53 4.44
256 260 4.202050 GCATGTCAACTCCTTCTGTTTTGT 60.202 41.667 0.00 0.00 0.00 2.83
266 270 5.133221 AGTTGTAAAAGCATGTCAACTCCT 58.867 37.500 0.00 0.00 42.98 3.69
267 271 5.438761 AGTTGTAAAAGCATGTCAACTCC 57.561 39.130 0.00 0.00 42.98 3.85
325 329 7.631161 GCAGGATGATGATTTTGTTGTTATCCA 60.631 37.037 0.00 0.00 39.69 3.41
330 334 4.487948 CGCAGGATGATGATTTTGTTGTT 58.512 39.130 0.00 0.00 39.69 2.83
413 417 2.032620 CAAGTACTACTCATCCCCGCT 58.967 52.381 0.00 0.00 0.00 5.52
415 419 3.430374 CCAACAAGTACTACTCATCCCCG 60.430 52.174 0.00 0.00 0.00 5.73
508 512 1.889530 GCGTGAGTAGGAGGCAACCT 61.890 60.000 8.23 8.23 43.32 3.50
511 515 1.911269 TGGCGTGAGTAGGAGGCAA 60.911 57.895 0.00 0.00 36.23 4.52
588 594 9.106070 GAGTAGGAGTGTTGTCTTTCTTAAAAA 57.894 33.333 0.00 0.00 0.00 1.94
589 595 8.483758 AGAGTAGGAGTGTTGTCTTTCTTAAAA 58.516 33.333 0.00 0.00 0.00 1.52
590 596 8.019656 AGAGTAGGAGTGTTGTCTTTCTTAAA 57.980 34.615 0.00 0.00 0.00 1.52
591 597 7.506261 AGAGAGTAGGAGTGTTGTCTTTCTTAA 59.494 37.037 0.00 0.00 0.00 1.85
592 598 7.005296 AGAGAGTAGGAGTGTTGTCTTTCTTA 58.995 38.462 0.00 0.00 0.00 2.10
593 599 5.836358 AGAGAGTAGGAGTGTTGTCTTTCTT 59.164 40.000 0.00 0.00 0.00 2.52
594 600 5.390387 AGAGAGTAGGAGTGTTGTCTTTCT 58.610 41.667 0.00 0.00 0.00 2.52
595 601 5.475564 AGAGAGAGTAGGAGTGTTGTCTTTC 59.524 44.000 0.00 0.00 0.00 2.62
596 602 5.390387 AGAGAGAGTAGGAGTGTTGTCTTT 58.610 41.667 0.00 0.00 0.00 2.52
597 603 4.993028 AGAGAGAGTAGGAGTGTTGTCTT 58.007 43.478 0.00 0.00 0.00 3.01
598 604 4.288626 AGAGAGAGAGTAGGAGTGTTGTCT 59.711 45.833 0.00 0.00 0.00 3.41
599 605 4.585879 AGAGAGAGAGTAGGAGTGTTGTC 58.414 47.826 0.00 0.00 0.00 3.18
600 606 4.288626 AGAGAGAGAGAGTAGGAGTGTTGT 59.711 45.833 0.00 0.00 0.00 3.32
601 607 4.843728 AGAGAGAGAGAGTAGGAGTGTTG 58.156 47.826 0.00 0.00 0.00 3.33
602 608 5.514500 AAGAGAGAGAGAGTAGGAGTGTT 57.486 43.478 0.00 0.00 0.00 3.32
603 609 5.514500 AAAGAGAGAGAGAGTAGGAGTGT 57.486 43.478 0.00 0.00 0.00 3.55
604 610 6.180472 AGAAAAGAGAGAGAGAGTAGGAGTG 58.820 44.000 0.00 0.00 0.00 3.51
605 611 6.388619 AGAAAAGAGAGAGAGAGTAGGAGT 57.611 41.667 0.00 0.00 0.00 3.85
606 612 7.703058 AAAGAAAAGAGAGAGAGAGTAGGAG 57.297 40.000 0.00 0.00 0.00 3.69
607 613 7.039363 CCAAAAGAAAAGAGAGAGAGAGTAGGA 60.039 40.741 0.00 0.00 0.00 2.94
608 614 7.039363 TCCAAAAGAAAAGAGAGAGAGAGTAGG 60.039 40.741 0.00 0.00 0.00 3.18
609 615 7.891561 TCCAAAAGAAAAGAGAGAGAGAGTAG 58.108 38.462 0.00 0.00 0.00 2.57
610 616 7.507616 ACTCCAAAAGAAAAGAGAGAGAGAGTA 59.492 37.037 0.00 0.00 0.00 2.59
611 617 6.326323 ACTCCAAAAGAAAAGAGAGAGAGAGT 59.674 38.462 0.00 0.00 0.00 3.24
612 618 6.646240 CACTCCAAAAGAAAAGAGAGAGAGAG 59.354 42.308 0.00 0.00 0.00 3.20
613 619 6.463614 CCACTCCAAAAGAAAAGAGAGAGAGA 60.464 42.308 0.00 0.00 0.00 3.10
614 620 5.700373 CCACTCCAAAAGAAAAGAGAGAGAG 59.300 44.000 0.00 0.00 0.00 3.20
615 621 5.366768 TCCACTCCAAAAGAAAAGAGAGAGA 59.633 40.000 0.00 0.00 0.00 3.10
616 622 5.468409 GTCCACTCCAAAAGAAAAGAGAGAG 59.532 44.000 0.00 0.00 0.00 3.20
617 623 5.104527 TGTCCACTCCAAAAGAAAAGAGAGA 60.105 40.000 0.00 0.00 0.00 3.10
618 624 5.008118 GTGTCCACTCCAAAAGAAAAGAGAG 59.992 44.000 0.00 0.00 0.00 3.20
619 625 4.881850 GTGTCCACTCCAAAAGAAAAGAGA 59.118 41.667 0.00 0.00 0.00 3.10
620 626 4.884164 AGTGTCCACTCCAAAAGAAAAGAG 59.116 41.667 0.00 0.00 36.92 2.85
621 627 4.855340 AGTGTCCACTCCAAAAGAAAAGA 58.145 39.130 0.00 0.00 36.92 2.52
634 640 4.229582 AGAGAGAGAATAGGAGTGTCCACT 59.770 45.833 0.00 0.00 45.84 4.00
635 641 4.338118 CAGAGAGAGAATAGGAGTGTCCAC 59.662 50.000 0.00 0.00 39.61 4.02
636 642 4.017958 ACAGAGAGAGAATAGGAGTGTCCA 60.018 45.833 0.00 0.00 39.61 4.02
637 643 4.532834 ACAGAGAGAGAATAGGAGTGTCC 58.467 47.826 0.00 0.00 36.58 4.02
638 644 5.437060 AGACAGAGAGAGAATAGGAGTGTC 58.563 45.833 0.00 0.00 33.51 3.67
639 645 5.450818 AGACAGAGAGAGAATAGGAGTGT 57.549 43.478 0.00 0.00 0.00 3.55
640 646 6.122277 AGAAGACAGAGAGAGAATAGGAGTG 58.878 44.000 0.00 0.00 0.00 3.51
641 647 6.158695 AGAGAAGACAGAGAGAGAATAGGAGT 59.841 42.308 0.00 0.00 0.00 3.85
642 648 6.595682 AGAGAAGACAGAGAGAGAATAGGAG 58.404 44.000 0.00 0.00 0.00 3.69
643 649 6.575244 AGAGAAGACAGAGAGAGAATAGGA 57.425 41.667 0.00 0.00 0.00 2.94
644 650 7.645058 AAAGAGAAGACAGAGAGAGAATAGG 57.355 40.000 0.00 0.00 0.00 2.57
678 684 2.886862 TCGAGAGAGTAGGAGTACCG 57.113 55.000 0.00 0.00 37.08 4.02
881 892 4.447342 GTACGGACGGGGAGGGGA 62.447 72.222 0.00 0.00 0.00 4.81
1224 1239 4.388773 CGTCAAGAATCAGAAACATTCCGA 59.611 41.667 0.00 0.00 31.52 4.55
1322 1338 2.231529 CGGTCTAGGTCCATCTGGTAG 58.768 57.143 0.00 0.00 36.34 3.18
1422 1467 0.944311 CAGTAACTGAACCGCTGCGT 60.944 55.000 21.59 2.52 32.44 5.24
1428 1473 2.427232 TTCGGTCAGTAACTGAACCG 57.573 50.000 19.21 19.21 44.55 4.44
1760 1806 1.226717 GTCATCCTCCGTGCTCGAC 60.227 63.158 10.21 0.00 39.71 4.20
1870 1920 8.414003 TGGTGAAGTACTAATCATCATACTGAC 58.586 37.037 6.44 0.00 31.95 3.51
1882 1932 7.148069 GCTGGCTTTAAATGGTGAAGTACTAAT 60.148 37.037 0.00 0.00 0.00 1.73
1982 2035 6.016443 TGCATGTTTCATGTTTGTCAGTGATA 60.016 34.615 10.68 0.00 0.00 2.15
1995 2048 4.771590 AGTTGTAGGTGCATGTTTCATG 57.228 40.909 5.49 5.49 0.00 3.07
1997 2050 4.203226 TCAAGTTGTAGGTGCATGTTTCA 58.797 39.130 2.11 0.00 0.00 2.69
1998 2051 4.829064 TCAAGTTGTAGGTGCATGTTTC 57.171 40.909 2.11 0.00 0.00 2.78
1999 2052 5.789643 AATCAAGTTGTAGGTGCATGTTT 57.210 34.783 2.11 0.00 0.00 2.83
2575 3608 0.526211 GGGGGCACGTGAAAATCTTC 59.474 55.000 22.23 0.00 0.00 2.87
2576 3609 0.112412 AGGGGGCACGTGAAAATCTT 59.888 50.000 22.23 0.00 0.00 2.40
2588 3621 4.980592 TGGCTGACTGAGGGGGCA 62.981 66.667 0.00 0.00 0.00 5.36
2590 3623 1.001641 CTTTGGCTGACTGAGGGGG 60.002 63.158 0.00 0.00 0.00 5.40
2688 3724 6.879458 ACTGACTGGTAGGTTAAAATGCTAAG 59.121 38.462 0.00 0.00 0.00 2.18
2726 3762 2.236146 AGCTCCATAACGTCCATGTCAA 59.764 45.455 8.73 0.00 0.00 3.18
2758 3794 5.744345 CGCTAATGCCTATATACAGTACTGC 59.256 44.000 22.90 6.70 35.36 4.40
2791 3838 4.733405 GCACTTGTTGAAAAGTAAGGTTCG 59.267 41.667 0.00 0.00 38.34 3.95
2912 3959 8.502387 CAACAAAAAGGACAGAAACATTTTCAA 58.498 29.630 1.72 0.00 31.71 2.69
2926 3973 4.025480 CAGCAAATCAGCAACAAAAAGGAC 60.025 41.667 0.00 0.00 36.85 3.85
3204 4251 0.753867 TACAGGTCGTCAGCAACCAA 59.246 50.000 0.00 0.00 38.06 3.67
3263 4310 2.680841 TCAAATAAGGTCAATTCGGCCG 59.319 45.455 22.12 22.12 0.00 6.13
3294 4343 7.558161 TGATAATCTGTTTGATACTGCCTTG 57.442 36.000 0.00 0.00 34.45 3.61
3295 4344 8.757982 ATTGATAATCTGTTTGATACTGCCTT 57.242 30.769 0.00 0.00 34.45 4.35
3296 4345 7.446625 GGATTGATAATCTGTTTGATACTGCCT 59.553 37.037 2.03 0.00 38.01 4.75
3297 4346 7.446625 AGGATTGATAATCTGTTTGATACTGCC 59.553 37.037 2.03 0.00 38.01 4.85
3298 4347 8.388484 AGGATTGATAATCTGTTTGATACTGC 57.612 34.615 2.03 0.00 38.01 4.40
3299 4348 9.551734 TGAGGATTGATAATCTGTTTGATACTG 57.448 33.333 2.03 0.00 38.01 2.74
3301 4350 9.553064 ACTGAGGATTGATAATCTGTTTGATAC 57.447 33.333 2.03 0.00 38.01 2.24
3302 4351 9.551734 CACTGAGGATTGATAATCTGTTTGATA 57.448 33.333 2.03 0.00 38.01 2.15
3303 4352 7.013083 GCACTGAGGATTGATAATCTGTTTGAT 59.987 37.037 2.03 0.00 38.01 2.57
3304 4353 6.317140 GCACTGAGGATTGATAATCTGTTTGA 59.683 38.462 2.03 0.00 38.01 2.69
3305 4354 6.459298 GGCACTGAGGATTGATAATCTGTTTG 60.459 42.308 2.03 0.00 38.01 2.93
3308 4357 4.164796 TGGCACTGAGGATTGATAATCTGT 59.835 41.667 2.03 0.00 38.01 3.41
3309 4358 4.711399 TGGCACTGAGGATTGATAATCTG 58.289 43.478 2.03 0.00 38.01 2.90
3310 4359 5.378230 TTGGCACTGAGGATTGATAATCT 57.622 39.130 0.00 0.00 38.01 2.40
3311 4360 6.455360 TTTTGGCACTGAGGATTGATAATC 57.545 37.500 0.00 0.00 37.17 1.75
3313 4362 6.189859 AGATTTTGGCACTGAGGATTGATAA 58.810 36.000 0.00 0.00 0.00 1.75
3314 4363 5.759059 AGATTTTGGCACTGAGGATTGATA 58.241 37.500 0.00 0.00 0.00 2.15
3315 4364 4.607239 AGATTTTGGCACTGAGGATTGAT 58.393 39.130 0.00 0.00 0.00 2.57
3317 4366 4.461781 AGAAGATTTTGGCACTGAGGATTG 59.538 41.667 0.00 0.00 0.00 2.67
3318 4367 4.461781 CAGAAGATTTTGGCACTGAGGATT 59.538 41.667 0.00 0.00 0.00 3.01
3319 4368 4.015084 CAGAAGATTTTGGCACTGAGGAT 58.985 43.478 0.00 0.00 0.00 3.24
3320 4369 3.072915 TCAGAAGATTTTGGCACTGAGGA 59.927 43.478 0.00 0.00 32.04 3.71
3321 4370 3.415212 TCAGAAGATTTTGGCACTGAGG 58.585 45.455 0.00 0.00 32.04 3.86
3322 4371 5.640189 ATTCAGAAGATTTTGGCACTGAG 57.360 39.130 0.00 0.00 36.13 3.35
3323 4372 5.047802 GGAATTCAGAAGATTTTGGCACTGA 60.048 40.000 7.93 0.00 33.53 3.41
3324 4373 5.047519 AGGAATTCAGAAGATTTTGGCACTG 60.048 40.000 7.93 0.00 0.00 3.66
3325 4374 5.047519 CAGGAATTCAGAAGATTTTGGCACT 60.048 40.000 7.93 0.00 0.00 4.40
3332 4407 6.794534 ACCTTACCAGGAATTCAGAAGATTT 58.205 36.000 7.93 0.00 44.19 2.17
3349 4424 3.870274 ACCGCTTCATTTCTACCTTACC 58.130 45.455 0.00 0.00 0.00 2.85
3367 4525 3.135225 TGGAGTACACACATTTGAACCG 58.865 45.455 0.00 0.00 0.00 4.44
3373 4531 7.094205 GGAATTCATTCTGGAGTACACACATTT 60.094 37.037 7.93 0.00 37.00 2.32
3377 4535 4.330074 CGGAATTCATTCTGGAGTACACAC 59.670 45.833 7.93 0.00 39.05 3.82
3387 4545 5.874810 TGTTCTCCTAACGGAATTCATTCTG 59.125 40.000 7.93 6.79 46.18 3.02
3392 4550 4.322499 GGTCTGTTCTCCTAACGGAATTCA 60.322 45.833 7.93 0.00 39.29 2.57
3395 4553 2.165845 CGGTCTGTTCTCCTAACGGAAT 59.834 50.000 1.17 0.00 39.29 3.01
3396 4554 1.542915 CGGTCTGTTCTCCTAACGGAA 59.457 52.381 1.17 0.00 39.29 4.30
3397 4555 1.171308 CGGTCTGTTCTCCTAACGGA 58.829 55.000 0.00 0.00 37.82 4.69
3398 4556 0.886563 ACGGTCTGTTCTCCTAACGG 59.113 55.000 0.00 0.00 0.00 4.44
3399 4557 1.268899 ACACGGTCTGTTCTCCTAACG 59.731 52.381 0.00 0.00 0.00 3.18
3401 4559 4.084287 ACATACACGGTCTGTTCTCCTAA 58.916 43.478 0.00 0.00 33.91 2.69
3403 4561 2.526432 ACATACACGGTCTGTTCTCCT 58.474 47.619 0.00 0.00 33.91 3.69
3404 4562 4.097437 TGATACATACACGGTCTGTTCTCC 59.903 45.833 1.59 0.00 33.91 3.71
3407 4565 4.995124 ACTGATACATACACGGTCTGTTC 58.005 43.478 1.59 1.72 33.91 3.18
3408 4566 6.710597 ATACTGATACATACACGGTCTGTT 57.289 37.500 1.59 0.00 33.91 3.16
3409 4567 6.710597 AATACTGATACATACACGGTCTGT 57.289 37.500 0.00 0.00 36.82 3.41
3410 4568 8.420374 AAAAATACTGATACATACACGGTCTG 57.580 34.615 0.00 0.00 0.00 3.51
3494 4663 7.454260 AAATCTTTTGGAGATAACTGGTGAC 57.546 36.000 0.00 0.00 44.41 3.67
3504 4683 8.863086 TCAGACAATGAAAAATCTTTTGGAGAT 58.137 29.630 0.00 0.00 39.98 2.75
3506 4685 7.922278 TGTCAGACAATGAAAAATCTTTTGGAG 59.078 33.333 0.00 0.00 40.43 3.86
3507 4686 7.780064 TGTCAGACAATGAAAAATCTTTTGGA 58.220 30.769 0.00 0.00 40.43 3.53
3508 4687 8.330302 GTTGTCAGACAATGAAAAATCTTTTGG 58.670 33.333 19.04 0.00 40.59 3.28
3520 4699 6.017934 GCTGAACTTAAGTTGTCAGACAATGA 60.018 38.462 29.29 5.10 40.59 2.57
3529 4708 5.008613 TGGTTGATGCTGAACTTAAGTTGTC 59.991 40.000 25.17 12.54 38.56 3.18
3603 4783 2.796245 CTTTACCGTTGCGCCAAGGC 62.796 60.000 13.35 0.00 37.85 4.35
3604 4784 1.209127 CTTTACCGTTGCGCCAAGG 59.791 57.895 11.90 11.90 0.00 3.61
3605 4785 1.442017 GCTTTACCGTTGCGCCAAG 60.442 57.895 4.18 0.00 0.00 3.61
3606 4786 1.894756 AGCTTTACCGTTGCGCCAA 60.895 52.632 4.18 0.00 0.00 4.52
3607 4787 2.281208 AGCTTTACCGTTGCGCCA 60.281 55.556 4.18 0.00 0.00 5.69
3608 4788 2.125202 AACAGCTTTACCGTTGCGCC 62.125 55.000 4.18 0.00 0.00 6.53
3609 4789 0.996727 CAACAGCTTTACCGTTGCGC 60.997 55.000 0.00 0.00 34.21 6.09
3610 4790 3.071495 CAACAGCTTTACCGTTGCG 57.929 52.632 1.41 0.00 34.21 4.85
3614 4794 0.951558 CAAGGCAACAGCTTTACCGT 59.048 50.000 0.00 0.00 41.41 4.83
3615 4795 0.951558 ACAAGGCAACAGCTTTACCG 59.048 50.000 0.00 0.00 41.41 4.02
3616 4796 1.953686 TCACAAGGCAACAGCTTTACC 59.046 47.619 0.00 0.00 41.41 2.85
3617 4797 2.287608 GGTCACAAGGCAACAGCTTTAC 60.288 50.000 0.00 0.00 41.41 2.01
3618 4798 1.953686 GGTCACAAGGCAACAGCTTTA 59.046 47.619 0.00 0.00 41.41 1.85
3619 4799 0.746659 GGTCACAAGGCAACAGCTTT 59.253 50.000 0.00 0.00 41.41 3.51
3620 4800 0.395586 TGGTCACAAGGCAACAGCTT 60.396 50.000 0.00 0.00 41.41 3.74
3621 4801 0.178981 ATGGTCACAAGGCAACAGCT 60.179 50.000 0.00 0.00 41.41 4.24
3622 4802 0.242017 GATGGTCACAAGGCAACAGC 59.758 55.000 0.00 0.00 41.41 4.40
3623 4803 1.538512 CTGATGGTCACAAGGCAACAG 59.461 52.381 0.00 0.00 41.41 3.16
3624 4804 1.608055 CTGATGGTCACAAGGCAACA 58.392 50.000 0.00 0.00 41.41 3.33
3625 4805 0.883833 CCTGATGGTCACAAGGCAAC 59.116 55.000 0.00 0.00 0.00 4.17
3626 4806 0.478072 ACCTGATGGTCACAAGGCAA 59.522 50.000 0.00 0.00 44.78 4.52
3627 4807 2.154139 ACCTGATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
3637 4817 2.289072 ACTCAAACTCGTGACCTGATGG 60.289 50.000 0.00 0.00 39.83 3.51
3638 4818 3.032017 ACTCAAACTCGTGACCTGATG 57.968 47.619 0.00 0.00 0.00 3.07
3639 4819 3.322254 AGAACTCAAACTCGTGACCTGAT 59.678 43.478 0.00 0.00 0.00 2.90
3640 4820 2.693591 AGAACTCAAACTCGTGACCTGA 59.306 45.455 0.00 0.00 0.00 3.86
3641 4821 2.797156 CAGAACTCAAACTCGTGACCTG 59.203 50.000 0.00 0.00 0.00 4.00
3642 4822 2.224066 CCAGAACTCAAACTCGTGACCT 60.224 50.000 0.00 0.00 0.00 3.85
3643 4823 2.135933 CCAGAACTCAAACTCGTGACC 58.864 52.381 0.00 0.00 0.00 4.02
3644 4824 3.093717 TCCAGAACTCAAACTCGTGAC 57.906 47.619 0.00 0.00 0.00 3.67
3645 4825 3.717707 CTTCCAGAACTCAAACTCGTGA 58.282 45.455 0.00 0.00 0.00 4.35
3646 4826 2.221981 GCTTCCAGAACTCAAACTCGTG 59.778 50.000 0.00 0.00 0.00 4.35
3647 4827 2.158957 TGCTTCCAGAACTCAAACTCGT 60.159 45.455 0.00 0.00 0.00 4.18
3648 4828 2.478134 CTGCTTCCAGAACTCAAACTCG 59.522 50.000 0.00 0.00 41.77 4.18
3649 4829 2.225255 GCTGCTTCCAGAACTCAAACTC 59.775 50.000 0.00 0.00 41.77 3.01
3650 4830 2.225467 GCTGCTTCCAGAACTCAAACT 58.775 47.619 0.00 0.00 41.77 2.66
3651 4831 1.268079 GGCTGCTTCCAGAACTCAAAC 59.732 52.381 0.00 0.00 41.77 2.93
3652 4832 1.143684 AGGCTGCTTCCAGAACTCAAA 59.856 47.619 0.00 0.00 41.77 2.69
3653 4833 0.767375 AGGCTGCTTCCAGAACTCAA 59.233 50.000 0.00 0.00 41.77 3.02
3654 4834 0.322975 GAGGCTGCTTCCAGAACTCA 59.677 55.000 0.00 0.00 41.77 3.41
3655 4835 0.612744 AGAGGCTGCTTCCAGAACTC 59.387 55.000 8.26 0.00 41.77 3.01
3656 4836 1.944177 TAGAGGCTGCTTCCAGAACT 58.056 50.000 8.26 0.00 41.77 3.01
3657 4837 2.289694 TGTTAGAGGCTGCTTCCAGAAC 60.290 50.000 8.26 10.62 41.77 3.01
3658 4838 1.977854 TGTTAGAGGCTGCTTCCAGAA 59.022 47.619 8.26 0.00 41.77 3.02
3659 4839 1.552337 CTGTTAGAGGCTGCTTCCAGA 59.448 52.381 8.26 0.00 41.77 3.86
3660 4840 1.552337 TCTGTTAGAGGCTGCTTCCAG 59.448 52.381 8.26 8.84 42.13 3.86
3661 4841 1.644509 TCTGTTAGAGGCTGCTTCCA 58.355 50.000 8.26 0.00 0.00 3.53
3662 4842 2.770164 TTCTGTTAGAGGCTGCTTCC 57.230 50.000 8.26 0.00 0.00 3.46
3663 4843 4.006319 ACATTTCTGTTAGAGGCTGCTTC 58.994 43.478 3.22 3.22 28.70 3.86
3664 4844 4.026356 ACATTTCTGTTAGAGGCTGCTT 57.974 40.909 0.00 0.00 28.70 3.91
3665 4845 3.710209 ACATTTCTGTTAGAGGCTGCT 57.290 42.857 0.00 0.00 28.70 4.24
3666 4846 3.873952 CCTACATTTCTGTTAGAGGCTGC 59.126 47.826 0.00 0.00 36.79 5.25
3667 4847 4.162320 TCCCTACATTTCTGTTAGAGGCTG 59.838 45.833 0.00 0.00 36.79 4.85
3668 4848 4.362677 TCCCTACATTTCTGTTAGAGGCT 58.637 43.478 0.00 0.00 36.79 4.58
3669 4849 4.755266 TCCCTACATTTCTGTTAGAGGC 57.245 45.455 0.00 0.00 36.79 4.70
3670 4850 6.819146 GTCTTTCCCTACATTTCTGTTAGAGG 59.181 42.308 0.00 0.00 36.79 3.69
3671 4851 7.547370 CAGTCTTTCCCTACATTTCTGTTAGAG 59.453 40.741 0.00 0.00 36.79 2.43
3672 4852 7.386851 CAGTCTTTCCCTACATTTCTGTTAGA 58.613 38.462 0.00 0.00 36.79 2.10
3673 4853 6.092807 GCAGTCTTTCCCTACATTTCTGTTAG 59.907 42.308 0.00 0.00 36.79 2.34
3674 4854 5.938125 GCAGTCTTTCCCTACATTTCTGTTA 59.062 40.000 0.00 0.00 36.79 2.41
3675 4855 4.762251 GCAGTCTTTCCCTACATTTCTGTT 59.238 41.667 0.00 0.00 36.79 3.16
3676 4856 4.327680 GCAGTCTTTCCCTACATTTCTGT 58.672 43.478 0.00 0.00 39.49 3.41
3677 4857 3.691609 GGCAGTCTTTCCCTACATTTCTG 59.308 47.826 0.00 0.00 0.00 3.02
3678 4858 3.589288 AGGCAGTCTTTCCCTACATTTCT 59.411 43.478 0.00 0.00 0.00 2.52
3679 4859 3.956744 AGGCAGTCTTTCCCTACATTTC 58.043 45.455 0.00 0.00 0.00 2.17
3680 4860 4.844884 GTAGGCAGTCTTTCCCTACATTT 58.155 43.478 10.34 0.00 46.57 2.32
3681 4861 4.489306 GTAGGCAGTCTTTCCCTACATT 57.511 45.455 10.34 0.00 46.57 2.71
3685 4865 6.526056 TCTATAGTAGGCAGTCTTTCCCTA 57.474 41.667 0.00 0.00 0.00 3.53
3686 4866 5.405063 TCTATAGTAGGCAGTCTTTCCCT 57.595 43.478 0.00 0.00 0.00 4.20
3687 4867 5.186215 GGATCTATAGTAGGCAGTCTTTCCC 59.814 48.000 0.00 0.00 0.00 3.97
3688 4868 5.775701 TGGATCTATAGTAGGCAGTCTTTCC 59.224 44.000 0.00 0.00 0.00 3.13
3689 4869 6.902771 TGGATCTATAGTAGGCAGTCTTTC 57.097 41.667 0.00 0.00 0.00 2.62
3690 4870 7.345914 ACTTTGGATCTATAGTAGGCAGTCTTT 59.654 37.037 0.30 0.00 0.00 2.52
3691 4871 6.841755 ACTTTGGATCTATAGTAGGCAGTCTT 59.158 38.462 0.30 0.00 0.00 3.01
3692 4872 6.266558 CACTTTGGATCTATAGTAGGCAGTCT 59.733 42.308 1.99 0.00 0.00 3.24
3693 4873 6.451393 CACTTTGGATCTATAGTAGGCAGTC 58.549 44.000 1.99 0.00 0.00 3.51
3694 4874 5.305644 CCACTTTGGATCTATAGTAGGCAGT 59.694 44.000 1.99 0.00 40.96 4.40
3695 4875 5.305644 ACCACTTTGGATCTATAGTAGGCAG 59.694 44.000 13.49 0.22 40.96 4.85
3696 4876 5.216622 ACCACTTTGGATCTATAGTAGGCA 58.783 41.667 13.49 0.00 40.96 4.75
3697 4877 5.810080 ACCACTTTGGATCTATAGTAGGC 57.190 43.478 13.49 0.00 40.96 3.93
3698 4878 8.578151 GTCTAACCACTTTGGATCTATAGTAGG 58.422 40.741 1.99 8.56 40.96 3.18
3699 4879 8.578151 GGTCTAACCACTTTGGATCTATAGTAG 58.422 40.741 1.99 0.00 40.96 2.57
3700 4880 7.508296 GGGTCTAACCACTTTGGATCTATAGTA 59.492 40.741 1.99 0.00 40.96 1.82
3701 4881 6.326843 GGGTCTAACCACTTTGGATCTATAGT 59.673 42.308 0.00 0.00 40.96 2.12
3702 4882 6.555360 AGGGTCTAACCACTTTGGATCTATAG 59.445 42.308 0.00 0.00 40.96 1.31
3703 4883 6.449956 AGGGTCTAACCACTTTGGATCTATA 58.550 40.000 0.00 0.00 40.96 1.31
3704 4884 5.289510 AGGGTCTAACCACTTTGGATCTAT 58.710 41.667 0.00 0.00 40.96 1.98
3705 4885 4.695606 AGGGTCTAACCACTTTGGATCTA 58.304 43.478 0.00 0.00 40.96 1.98
3706 4886 3.532102 AGGGTCTAACCACTTTGGATCT 58.468 45.455 0.00 0.00 40.96 2.75
3707 4887 4.302559 AAGGGTCTAACCACTTTGGATC 57.697 45.455 0.00 0.00 40.96 3.36
3708 4888 4.508584 GGAAAGGGTCTAACCACTTTGGAT 60.509 45.833 13.71 0.00 40.96 3.41
3709 4889 3.181437 GGAAAGGGTCTAACCACTTTGGA 60.181 47.826 13.71 0.00 40.96 3.53
3710 4890 3.154710 GGAAAGGGTCTAACCACTTTGG 58.845 50.000 13.71 0.00 41.02 3.28
3711 4891 3.821033 CAGGAAAGGGTCTAACCACTTTG 59.179 47.826 13.71 2.37 41.02 2.77
3712 4892 3.181433 CCAGGAAAGGGTCTAACCACTTT 60.181 47.826 10.46 10.46 41.02 2.66
3713 4893 2.375509 CCAGGAAAGGGTCTAACCACTT 59.624 50.000 0.00 0.00 41.02 3.16
3714 4894 1.985895 CCAGGAAAGGGTCTAACCACT 59.014 52.381 0.00 0.00 41.02 4.00
3715 4895 1.982958 TCCAGGAAAGGGTCTAACCAC 59.017 52.381 0.00 0.00 41.02 4.16
3716 4896 1.982958 GTCCAGGAAAGGGTCTAACCA 59.017 52.381 0.00 0.00 41.02 3.67
3717 4897 1.281287 GGTCCAGGAAAGGGTCTAACC 59.719 57.143 0.00 0.00 37.60 2.85
3718 4898 1.281287 GGGTCCAGGAAAGGGTCTAAC 59.719 57.143 0.00 0.00 0.00 2.34
3719 4899 1.153565 AGGGTCCAGGAAAGGGTCTAA 59.846 52.381 0.00 0.00 0.00 2.10
3720 4900 0.797579 AGGGTCCAGGAAAGGGTCTA 59.202 55.000 0.00 0.00 0.00 2.59
3721 4901 0.842467 CAGGGTCCAGGAAAGGGTCT 60.842 60.000 0.00 0.00 0.00 3.85
3722 4902 1.685820 CAGGGTCCAGGAAAGGGTC 59.314 63.158 0.00 0.00 0.00 4.46
3723 4903 2.539081 GCAGGGTCCAGGAAAGGGT 61.539 63.158 0.00 0.00 0.00 4.34
3724 4904 2.356667 GCAGGGTCCAGGAAAGGG 59.643 66.667 0.00 0.00 0.00 3.95
3725 4905 2.045926 CGCAGGGTCCAGGAAAGG 60.046 66.667 0.00 0.00 0.00 3.11
3726 4906 2.747855 GCGCAGGGTCCAGGAAAG 60.748 66.667 0.30 0.00 0.00 2.62
3727 4907 2.424842 ATTGCGCAGGGTCCAGGAAA 62.425 55.000 11.31 0.00 0.00 3.13
3728 4908 1.558167 TATTGCGCAGGGTCCAGGAA 61.558 55.000 11.31 0.00 0.00 3.36
3729 4909 1.992834 TATTGCGCAGGGTCCAGGA 60.993 57.895 11.31 0.00 0.00 3.86
3730 4910 1.819632 GTATTGCGCAGGGTCCAGG 60.820 63.158 11.31 0.00 0.00 4.45
3731 4911 0.464373 ATGTATTGCGCAGGGTCCAG 60.464 55.000 11.31 0.00 0.00 3.86
3732 4912 0.833949 TATGTATTGCGCAGGGTCCA 59.166 50.000 11.31 4.96 0.00 4.02
3733 4913 1.226746 GTATGTATTGCGCAGGGTCC 58.773 55.000 11.31 0.00 0.00 4.46
3734 4914 1.948104 TGTATGTATTGCGCAGGGTC 58.052 50.000 11.31 3.56 0.00 4.46
3735 4915 2.411628 TTGTATGTATTGCGCAGGGT 57.588 45.000 11.31 3.50 0.00 4.34
3736 4916 2.421775 TGTTTGTATGTATTGCGCAGGG 59.578 45.455 11.31 0.00 0.00 4.45
3737 4917 3.373748 TCTGTTTGTATGTATTGCGCAGG 59.626 43.478 11.31 0.00 0.00 4.85
3738 4918 4.598406 TCTGTTTGTATGTATTGCGCAG 57.402 40.909 11.31 0.00 0.00 5.18
3739 4919 4.693095 TCTTCTGTTTGTATGTATTGCGCA 59.307 37.500 5.66 5.66 0.00 6.09
3740 4920 5.216566 TCTTCTGTTTGTATGTATTGCGC 57.783 39.130 0.00 0.00 0.00 6.09
3741 4921 6.742718 CCTTTCTTCTGTTTGTATGTATTGCG 59.257 38.462 0.00 0.00 0.00 4.85
3742 4922 7.816640 TCCTTTCTTCTGTTTGTATGTATTGC 58.183 34.615 0.00 0.00 0.00 3.56
3743 4923 9.219603 TCTCCTTTCTTCTGTTTGTATGTATTG 57.780 33.333 0.00 0.00 0.00 1.90
3744 4924 9.220767 GTCTCCTTTCTTCTGTTTGTATGTATT 57.779 33.333 0.00 0.00 0.00 1.89
3745 4925 7.824779 GGTCTCCTTTCTTCTGTTTGTATGTAT 59.175 37.037 0.00 0.00 0.00 2.29
3746 4926 7.159372 GGTCTCCTTTCTTCTGTTTGTATGTA 58.841 38.462 0.00 0.00 0.00 2.29
3747 4927 5.998363 GGTCTCCTTTCTTCTGTTTGTATGT 59.002 40.000 0.00 0.00 0.00 2.29
3748 4928 5.997746 TGGTCTCCTTTCTTCTGTTTGTATG 59.002 40.000 0.00 0.00 0.00 2.39
3749 4929 6.187727 TGGTCTCCTTTCTTCTGTTTGTAT 57.812 37.500 0.00 0.00 0.00 2.29
3750 4930 5.623956 TGGTCTCCTTTCTTCTGTTTGTA 57.376 39.130 0.00 0.00 0.00 2.41
3751 4931 4.503714 TGGTCTCCTTTCTTCTGTTTGT 57.496 40.909 0.00 0.00 0.00 2.83
3752 4932 6.211515 CAATTGGTCTCCTTTCTTCTGTTTG 58.788 40.000 0.00 0.00 0.00 2.93
3753 4933 5.221322 GCAATTGGTCTCCTTTCTTCTGTTT 60.221 40.000 7.72 0.00 0.00 2.83
3754 4934 4.279420 GCAATTGGTCTCCTTTCTTCTGTT 59.721 41.667 7.72 0.00 0.00 3.16
3755 4935 3.823304 GCAATTGGTCTCCTTTCTTCTGT 59.177 43.478 7.72 0.00 0.00 3.41
3756 4936 3.822735 TGCAATTGGTCTCCTTTCTTCTG 59.177 43.478 7.72 0.00 0.00 3.02
3757 4937 4.104383 TGCAATTGGTCTCCTTTCTTCT 57.896 40.909 7.72 0.00 0.00 2.85
3758 4938 5.397142 AATGCAATTGGTCTCCTTTCTTC 57.603 39.130 7.72 0.00 33.44 2.87
3772 4952 4.202182 GGCAGATACATGTCCAATGCAATT 60.202 41.667 20.18 0.00 36.63 2.32
3773 4953 3.319972 GGCAGATACATGTCCAATGCAAT 59.680 43.478 20.18 1.27 33.94 3.56
3774 4954 2.689471 GGCAGATACATGTCCAATGCAA 59.311 45.455 20.18 0.00 33.94 4.08
3775 4955 2.092267 AGGCAGATACATGTCCAATGCA 60.092 45.455 20.18 0.00 33.94 3.96
3776 4956 2.579873 AGGCAGATACATGTCCAATGC 58.420 47.619 0.00 9.10 0.00 3.56
3777 4957 4.400251 ACAAAGGCAGATACATGTCCAATG 59.600 41.667 0.00 3.04 0.00 2.82
3778 4958 4.603131 ACAAAGGCAGATACATGTCCAAT 58.397 39.130 0.00 0.00 0.00 3.16
3779 4959 4.032960 ACAAAGGCAGATACATGTCCAA 57.967 40.909 0.00 0.00 0.00 3.53
3780 4960 3.719268 ACAAAGGCAGATACATGTCCA 57.281 42.857 0.00 0.00 0.00 4.02
3781 4961 3.129287 CCAACAAAGGCAGATACATGTCC 59.871 47.826 0.00 0.00 0.00 4.02
3782 4962 4.361451 CCAACAAAGGCAGATACATGTC 57.639 45.455 0.00 0.00 0.00 3.06
3823 5003 8.786826 TCTAGTTTTAAATGACCACCATACAG 57.213 34.615 0.00 0.00 34.45 2.74
3827 5007 7.775561 GGATCTCTAGTTTTAAATGACCACCAT 59.224 37.037 0.00 0.00 36.99 3.55
3828 5008 7.110155 GGATCTCTAGTTTTAAATGACCACCA 58.890 38.462 0.00 0.00 0.00 4.17
3829 5009 6.542735 GGGATCTCTAGTTTTAAATGACCACC 59.457 42.308 0.00 0.00 0.00 4.61
3830 5010 7.110155 TGGGATCTCTAGTTTTAAATGACCAC 58.890 38.462 0.00 0.00 0.00 4.16
3831 5011 7.265599 TGGGATCTCTAGTTTTAAATGACCA 57.734 36.000 0.00 0.00 0.00 4.02
3832 5012 8.624776 CATTGGGATCTCTAGTTTTAAATGACC 58.375 37.037 0.00 0.00 0.00 4.02
3833 5013 8.624776 CCATTGGGATCTCTAGTTTTAAATGAC 58.375 37.037 0.00 0.00 35.59 3.06
3834 5014 8.336235 ACCATTGGGATCTCTAGTTTTAAATGA 58.664 33.333 7.78 0.00 38.05 2.57
3835 5015 8.408601 CACCATTGGGATCTCTAGTTTTAAATG 58.591 37.037 7.78 0.00 38.05 2.32
3836 5016 7.068716 GCACCATTGGGATCTCTAGTTTTAAAT 59.931 37.037 7.78 0.00 38.05 1.40
3837 5017 6.377146 GCACCATTGGGATCTCTAGTTTTAAA 59.623 38.462 7.78 0.00 38.05 1.52
3838 5018 5.885912 GCACCATTGGGATCTCTAGTTTTAA 59.114 40.000 7.78 0.00 38.05 1.52
3839 5019 5.045213 TGCACCATTGGGATCTCTAGTTTTA 60.045 40.000 7.78 0.00 38.05 1.52
3840 5020 4.263905 TGCACCATTGGGATCTCTAGTTTT 60.264 41.667 7.78 0.00 38.05 2.43
3841 5021 3.266772 TGCACCATTGGGATCTCTAGTTT 59.733 43.478 7.78 0.00 38.05 2.66
3842 5022 2.846206 TGCACCATTGGGATCTCTAGTT 59.154 45.455 7.78 0.00 38.05 2.24
3843 5023 2.481441 TGCACCATTGGGATCTCTAGT 58.519 47.619 7.78 0.00 38.05 2.57
3844 5024 3.118112 AGTTGCACCATTGGGATCTCTAG 60.118 47.826 7.78 0.00 38.05 2.43
3845 5025 2.846206 AGTTGCACCATTGGGATCTCTA 59.154 45.455 7.78 0.00 38.05 2.43
3846 5026 1.637553 AGTTGCACCATTGGGATCTCT 59.362 47.619 7.78 0.00 38.05 3.10
3847 5027 2.019984 GAGTTGCACCATTGGGATCTC 58.980 52.381 7.78 4.17 38.05 2.75
3848 5028 1.341383 GGAGTTGCACCATTGGGATCT 60.341 52.381 7.78 0.00 38.05 2.75
3849 5029 1.106285 GGAGTTGCACCATTGGGATC 58.894 55.000 7.78 0.00 38.05 3.36
3850 5030 0.409092 TGGAGTTGCACCATTGGGAT 59.591 50.000 7.78 0.00 38.05 3.85
3851 5031 0.539438 GTGGAGTTGCACCATTGGGA 60.539 55.000 7.78 0.00 39.69 4.37
3852 5032 1.535204 GGTGGAGTTGCACCATTGGG 61.535 60.000 16.72 0.00 40.98 4.12
3853 5033 0.827089 TGGTGGAGTTGCACCATTGG 60.827 55.000 19.83 0.00 45.54 3.16
3854 5034 2.730990 TGGTGGAGTTGCACCATTG 58.269 52.632 19.83 0.00 45.54 2.82
3858 5038 1.111277 AAGTTTGGTGGAGTTGCACC 58.889 50.000 15.04 15.04 41.64 5.01
3865 5045 3.381272 TGAGCTTCAAAAGTTTGGTGGAG 59.619 43.478 4.04 0.00 38.66 3.86
3871 5051 8.080083 AGCAAATATTGAGCTTCAAAAGTTTG 57.920 30.769 9.25 17.40 40.12 2.93
3872 5052 8.667076 AAGCAAATATTGAGCTTCAAAAGTTT 57.333 26.923 17.89 0.00 44.67 2.66
3890 5070 6.238076 CGGCTAAAACTTTTGTCAAAGCAAAT 60.238 34.615 0.00 0.00 43.03 2.32
3898 5078 4.344448 CGAAACGGCTAAAACTTTTGTCA 58.656 39.130 0.00 0.00 0.00 3.58
3914 5094 4.911610 GGATCATCATTTTATGGCGAAACG 59.088 41.667 0.00 0.00 0.00 3.60
3924 5104 6.997476 TCAATCATCACGGGATCATCATTTTA 59.003 34.615 0.00 0.00 0.00 1.52
3935 5115 4.136796 GGAATTCATCAATCATCACGGGA 58.863 43.478 7.93 0.00 0.00 5.14
3939 5119 5.066375 TCGTTGGGAATTCATCAATCATCAC 59.934 40.000 7.93 0.00 0.00 3.06
3940 5120 5.192176 TCGTTGGGAATTCATCAATCATCA 58.808 37.500 7.93 0.00 0.00 3.07
3942 5122 5.049198 CGATCGTTGGGAATTCATCAATCAT 60.049 40.000 7.03 7.26 0.00 2.45
3943 5123 4.273235 CGATCGTTGGGAATTCATCAATCA 59.727 41.667 7.03 3.20 0.00 2.57
3944 5124 4.319766 CCGATCGTTGGGAATTCATCAATC 60.320 45.833 15.09 5.56 0.00 2.67
3945 5125 3.565482 CCGATCGTTGGGAATTCATCAAT 59.435 43.478 15.09 0.00 0.00 2.57
3946 5126 2.942376 CCGATCGTTGGGAATTCATCAA 59.058 45.455 15.09 8.40 0.00 2.57
3947 5127 2.560504 CCGATCGTTGGGAATTCATCA 58.439 47.619 15.09 2.20 0.00 3.07
3948 5128 1.264288 GCCGATCGTTGGGAATTCATC 59.736 52.381 15.09 0.00 0.00 2.92
3949 5129 1.308998 GCCGATCGTTGGGAATTCAT 58.691 50.000 15.09 0.00 0.00 2.57
3950 5130 0.035915 TGCCGATCGTTGGGAATTCA 60.036 50.000 15.09 0.00 0.00 2.57
3951 5131 0.657840 CTGCCGATCGTTGGGAATTC 59.342 55.000 15.09 0.00 0.00 2.17
3952 5132 0.748005 CCTGCCGATCGTTGGGAATT 60.748 55.000 15.09 0.00 0.00 2.17
3953 5133 1.153168 CCTGCCGATCGTTGGGAAT 60.153 57.895 15.09 0.00 0.00 3.01
3954 5134 1.622607 ATCCTGCCGATCGTTGGGAA 61.623 55.000 15.09 3.84 0.00 3.97
3967 5147 3.044059 GCAGCACGGTTCATCCTGC 62.044 63.158 0.00 0.00 41.57 4.85
3995 5175 0.110823 CTTTTGTACACGACCAGCGC 60.111 55.000 0.00 0.00 46.04 5.92
4032 5212 0.645868 GTCAGTACTTTGATCGCGGC 59.354 55.000 6.13 0.00 0.00 6.53
4044 5224 4.157120 ATGGCGGCGGGTCAGTAC 62.157 66.667 9.78 0.00 30.81 2.73
4064 5244 2.279120 GTCGGCGAGCCATCTCAG 60.279 66.667 11.20 0.00 39.30 3.35
4101 5311 2.804527 TGCTTCTGATATGCGATTGCTC 59.195 45.455 6.47 0.00 43.34 4.26
4117 5327 3.352222 AGTGCGTGCTGCTGCTTC 61.352 61.111 17.00 8.86 46.63 3.86
4121 5331 2.479198 CATCAGTGCGTGCTGCTG 59.521 61.111 0.00 9.56 46.63 4.41
4122 5332 3.429141 GCATCAGTGCGTGCTGCT 61.429 61.111 11.62 0.00 43.67 4.24
4140 5350 2.738521 GACTGCCGCGTCATGTGT 60.739 61.111 4.92 0.00 34.11 3.72
4172 5382 2.100603 GAGCTCGGAGTCGGTTCG 59.899 66.667 6.90 0.00 36.95 3.95
4173 5383 1.137825 CTGAGCTCGGAGTCGGTTC 59.862 63.158 18.26 0.00 36.95 3.62
4174 5384 2.995872 GCTGAGCTCGGAGTCGGTT 61.996 63.158 27.04 0.00 36.95 4.44
4175 5385 3.444805 GCTGAGCTCGGAGTCGGT 61.445 66.667 27.04 0.00 36.95 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.