Multiple sequence alignment - TraesCS3A01G405400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G405400 chr3A 100.000 3542 0 0 1 3542 649940424 649936883 0.000000e+00 6541.0
1 TraesCS3A01G405400 chr3A 93.443 122 7 1 2403 2524 649854972 649854852 2.810000e-41 180.0
2 TraesCS3A01G405400 chr3A 80.292 137 25 2 3405 3540 747049779 747049644 6.260000e-18 102.0
3 TraesCS3A01G405400 chr3B 92.334 2048 93 20 647 2648 678171776 678169747 0.000000e+00 2854.0
4 TraesCS3A01G405400 chr3B 86.998 423 28 8 3027 3430 678169656 678169242 5.390000e-123 451.0
5 TraesCS3A01G405400 chr3B 94.839 155 8 0 1389 1543 23382152 23382306 3.530000e-60 243.0
6 TraesCS3A01G405400 chr3B 93.443 122 7 1 2403 2524 678149047 678148927 2.810000e-41 180.0
7 TraesCS3A01G405400 chr3B 80.000 265 29 11 143 385 678172084 678171822 1.310000e-39 174.0
8 TraesCS3A01G405400 chr3B 98.718 78 1 0 4 81 678172332 678172255 4.770000e-29 139.0
9 TraesCS3A01G405400 chr3B 81.884 138 21 4 3405 3540 651028610 651028745 2.890000e-21 113.0
10 TraesCS3A01G405400 chr3B 81.752 137 22 3 3405 3540 823298720 823298854 1.040000e-20 111.0
11 TraesCS3A01G405400 chr3D 92.387 2036 92 32 647 2648 515676863 515674857 0.000000e+00 2843.0
12 TraesCS3A01G405400 chr3D 84.645 521 41 16 2896 3385 515674850 515674338 1.910000e-132 483.0
13 TraesCS3A01G405400 chr3D 82.022 267 22 8 143 385 515677186 515676922 1.670000e-48 204.0
14 TraesCS3A01G405400 chr3D 96.429 84 3 0 4 87 515677436 515677353 4.770000e-29 139.0
15 TraesCS3A01G405400 chr3D 92.473 93 6 1 2403 2495 515668319 515668228 7.980000e-27 132.0
16 TraesCS3A01G405400 chr6A 89.404 151 16 0 383 533 153373069 153372919 1.300000e-44 191.0
17 TraesCS3A01G405400 chr6A 89.855 138 13 1 3401 3538 558047197 558047333 3.630000e-40 176.0
18 TraesCS3A01G405400 chr1A 89.404 151 16 0 383 533 91103481 91103631 1.300000e-44 191.0
19 TraesCS3A01G405400 chr2D 88.742 151 17 0 383 533 192995281 192995131 6.040000e-43 185.0
20 TraesCS3A01G405400 chr2D 83.212 137 21 2 3405 3540 18357893 18358028 1.340000e-24 124.0
21 TraesCS3A01G405400 chr2A 88.742 151 17 0 383 533 206855010 206854860 6.040000e-43 185.0
22 TraesCS3A01G405400 chr2B 87.417 151 17 2 383 533 249209376 249209228 4.700000e-39 172.0
23 TraesCS3A01G405400 chr2B 86.667 135 14 4 3408 3540 696368627 696368495 2.850000e-31 147.0
24 TraesCS3A01G405400 chr5D 89.474 133 14 0 383 515 299073581 299073449 6.080000e-38 169.0
25 TraesCS3A01G405400 chr5D 97.059 34 1 0 1837 1870 480362379 480362346 1.370000e-04 58.4
26 TraesCS3A01G405400 chr7A 84.768 151 23 0 383 533 467424536 467424386 6.120000e-33 152.0
27 TraesCS3A01G405400 chr7A 86.667 135 17 1 3406 3540 645073894 645074027 7.920000e-32 148.0
28 TraesCS3A01G405400 chr7A 84.106 151 24 0 383 533 467855779 467855629 2.850000e-31 147.0
29 TraesCS3A01G405400 chr6B 87.218 133 15 1 401 533 668910713 668910843 2.200000e-32 150.0
30 TraesCS3A01G405400 chr6B 84.173 139 20 2 3403 3540 702688567 702688704 2.220000e-27 134.0
31 TraesCS3A01G405400 chr7D 81.752 137 23 2 3405 3540 426190376 426190511 2.890000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G405400 chr3A 649936883 649940424 3541 True 6541.00 6541 100.00000 1 3542 1 chr3A.!!$R2 3541
1 TraesCS3A01G405400 chr3B 678169242 678172332 3090 True 904.50 2854 89.51250 4 3430 4 chr3B.!!$R2 3426
2 TraesCS3A01G405400 chr3D 515674338 515677436 3098 True 917.25 2843 88.87075 4 3385 4 chr3D.!!$R2 3381


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
621 755 0.039472 TGGCAATGCTGTATGGTGGT 59.961 50.0 4.82 0.0 0.0 4.16 F
1691 1874 0.040781 GAGTCGCTGGAGATCTACGC 60.041 60.0 10.60 10.6 0.0 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1726 1909 0.250513 AGAAGGCCGATGAAGGTCAC 59.749 55.0 0.0 0.0 38.64 3.67 R
2850 3033 0.035247 TACAAAATAACGCCGCCCCT 60.035 50.0 0.0 0.0 0.00 4.79 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 84 4.009675 TGACCTTATTTGATGTGAGCCAC 58.990 43.478 0.00 0.00 34.56 5.01
98 101 3.837213 CCACAAGGCAGTATCAAACAG 57.163 47.619 0.00 0.00 0.00 3.16
100 103 4.012374 CCACAAGGCAGTATCAAACAGAT 58.988 43.478 0.00 0.00 40.86 2.90
101 104 4.460382 CCACAAGGCAGTATCAAACAGATT 59.540 41.667 0.00 0.00 38.19 2.40
102 105 5.647658 CCACAAGGCAGTATCAAACAGATTA 59.352 40.000 0.00 0.00 38.19 1.75
104 107 7.412853 CACAAGGCAGTATCAAACAGATTATC 58.587 38.462 0.00 0.00 38.19 1.75
105 108 7.066163 CACAAGGCAGTATCAAACAGATTATCA 59.934 37.037 0.00 0.00 38.19 2.15
106 109 7.611467 ACAAGGCAGTATCAAACAGATTATCAA 59.389 33.333 0.00 0.00 38.19 2.57
107 110 8.627403 CAAGGCAGTATCAAACAGATTATCAAT 58.373 33.333 0.00 0.00 38.19 2.57
108 111 8.388484 AGGCAGTATCAAACAGATTATCAATC 57.612 34.615 0.00 0.00 38.19 2.67
109 112 7.446625 AGGCAGTATCAAACAGATTATCAATCC 59.553 37.037 0.00 0.00 38.71 3.01
110 113 7.446625 GGCAGTATCAAACAGATTATCAATCCT 59.553 37.037 0.00 0.00 38.71 3.24
111 114 8.502387 GCAGTATCAAACAGATTATCAATCCTC 58.498 37.037 0.00 0.00 38.71 3.71
112 115 9.551734 CAGTATCAAACAGATTATCAATCCTCA 57.448 33.333 0.00 0.00 38.71 3.86
119 148 5.128205 CAGATTATCAATCCTCAGTGCCAA 58.872 41.667 0.00 0.00 38.71 4.52
136 165 5.047519 AGTGCCAAAATCTTCTGAATTCCTG 60.048 40.000 2.27 0.00 0.00 3.86
154 266 5.099042 TCCTGGTAAGGTAGAAATGAAGC 57.901 43.478 0.00 0.00 44.82 3.86
160 272 3.695830 AGGTAGAAATGAAGCGGTTCA 57.304 42.857 30.00 30.00 46.81 3.18
164 276 5.095490 GGTAGAAATGAAGCGGTTCAAATG 58.905 41.667 31.27 0.00 45.88 2.32
174 286 2.095919 GCGGTTCAAATGTGTGTACTCC 60.096 50.000 0.00 0.00 0.00 3.85
179 291 5.473504 GGTTCAAATGTGTGTACTCCAGAAT 59.526 40.000 0.00 0.00 0.00 2.40
182 294 6.295249 TCAAATGTGTGTACTCCAGAATGAA 58.705 36.000 0.00 0.00 39.69 2.57
183 295 6.942005 TCAAATGTGTGTACTCCAGAATGAAT 59.058 34.615 0.00 0.00 39.69 2.57
184 296 7.448161 TCAAATGTGTGTACTCCAGAATGAATT 59.552 33.333 0.00 0.00 39.69 2.17
185 297 6.992063 ATGTGTGTACTCCAGAATGAATTC 57.008 37.500 0.00 0.00 39.69 2.17
186 298 5.245531 TGTGTGTACTCCAGAATGAATTCC 58.754 41.667 2.27 0.00 39.69 3.01
188 300 4.020573 TGTGTACTCCAGAATGAATTCCGT 60.021 41.667 2.27 0.00 39.69 4.69
190 302 6.103997 GTGTACTCCAGAATGAATTCCGTTA 58.896 40.000 2.27 0.00 39.69 3.18
191 303 6.255887 GTGTACTCCAGAATGAATTCCGTTAG 59.744 42.308 2.27 0.00 39.69 2.34
194 306 5.023533 TCCAGAATGAATTCCGTTAGGAG 57.976 43.478 2.27 0.00 44.13 3.69
195 307 4.714802 TCCAGAATGAATTCCGTTAGGAGA 59.285 41.667 2.27 0.00 44.13 3.71
196 308 5.188948 TCCAGAATGAATTCCGTTAGGAGAA 59.811 40.000 2.27 0.00 44.13 2.87
197 309 5.294552 CCAGAATGAATTCCGTTAGGAGAAC 59.705 44.000 2.27 0.00 44.13 3.01
199 311 6.036517 CAGAATGAATTCCGTTAGGAGAACAG 59.963 42.308 2.27 0.00 44.13 3.16
200 312 8.058698 CAGAATGAATTCCGTTAGGAGAACAGA 61.059 40.741 2.27 0.00 44.13 3.41
203 315 1.171308 TCCGTTAGGAGAACAGACCG 58.829 55.000 0.00 0.00 42.75 4.79
290 423 4.787551 TGTTGTTGATAAGGTCACCAGTT 58.212 39.130 0.00 0.00 36.32 3.16
291 424 5.931294 TGTTGTTGATAAGGTCACCAGTTA 58.069 37.500 0.00 0.00 36.32 2.24
293 426 6.653320 TGTTGTTGATAAGGTCACCAGTTATC 59.347 38.462 8.35 8.35 36.32 1.75
294 427 6.620877 TGTTGATAAGGTCACCAGTTATCT 57.379 37.500 14.13 0.00 36.32 1.98
295 428 6.640518 TGTTGATAAGGTCACCAGTTATCTC 58.359 40.000 14.13 9.40 36.32 2.75
302 435 4.597507 AGGTCACCAGTTATCTCCAAAAGA 59.402 41.667 0.00 0.00 38.72 2.52
307 440 8.360390 GTCACCAGTTATCTCCAAAAGATTTTT 58.640 33.333 0.00 0.00 42.30 1.94
347 481 0.111061 TCAGCATCAACCAACCAGCT 59.889 50.000 0.00 0.00 0.00 4.24
382 516 6.502136 TTCGGCAGTGATCTATCTACATAG 57.498 41.667 0.00 0.00 34.24 2.23
385 519 6.372937 TCGGCAGTGATCTATCTACATAGAAG 59.627 42.308 0.00 0.00 43.55 2.85
386 520 6.404184 CGGCAGTGATCTATCTACATAGAAGG 60.404 46.154 0.00 0.00 43.55 3.46
387 521 6.127479 GGCAGTGATCTATCTACATAGAAGGG 60.127 46.154 0.00 0.00 43.55 3.95
390 524 7.339212 CAGTGATCTATCTACATAGAAGGGGAG 59.661 44.444 0.00 0.00 43.55 4.30
391 525 6.096282 GTGATCTATCTACATAGAAGGGGAGC 59.904 46.154 0.00 0.00 43.55 4.70
392 526 4.936802 TCTATCTACATAGAAGGGGAGCC 58.063 47.826 0.00 0.00 38.48 4.70
393 527 3.933239 ATCTACATAGAAGGGGAGCCT 57.067 47.619 0.00 0.00 35.69 4.58
394 528 3.708236 TCTACATAGAAGGGGAGCCTT 57.292 47.619 0.00 0.00 0.00 4.35
395 529 3.309296 TCTACATAGAAGGGGAGCCTTG 58.691 50.000 0.00 0.00 0.00 3.61
396 530 1.216990 ACATAGAAGGGGAGCCTTGG 58.783 55.000 0.00 0.00 0.00 3.61
397 531 0.179006 CATAGAAGGGGAGCCTTGGC 60.179 60.000 2.97 2.97 0.00 4.52
398 532 1.700042 ATAGAAGGGGAGCCTTGGCG 61.700 60.000 5.95 0.00 0.00 5.69
406 540 4.323477 AGCCTTGGCGCAACGGTA 62.323 61.111 10.83 0.00 0.00 4.02
407 541 3.358707 GCCTTGGCGCAACGGTAA 61.359 61.111 10.83 0.00 0.00 2.85
408 542 2.910345 GCCTTGGCGCAACGGTAAA 61.910 57.895 10.83 0.00 0.00 2.01
409 543 1.209127 CCTTGGCGCAACGGTAAAG 59.791 57.895 10.83 0.71 0.00 1.85
410 544 1.442017 CTTGGCGCAACGGTAAAGC 60.442 57.895 10.83 0.00 0.00 3.51
411 545 1.852067 CTTGGCGCAACGGTAAAGCT 61.852 55.000 10.83 0.00 0.00 3.74
412 546 2.123988 TTGGCGCAACGGTAAAGCTG 62.124 55.000 10.83 0.00 0.00 4.24
413 547 2.613506 GGCGCAACGGTAAAGCTGT 61.614 57.895 10.83 0.00 38.60 4.40
414 548 1.281656 GCGCAACGGTAAAGCTGTT 59.718 52.632 0.30 0.00 46.91 3.16
418 552 3.414486 AACGGTAAAGCTGTTGCCT 57.586 47.368 11.70 0.88 44.44 4.75
419 553 1.687563 AACGGTAAAGCTGTTGCCTT 58.312 45.000 11.70 2.94 44.44 4.35
420 554 0.951558 ACGGTAAAGCTGTTGCCTTG 59.048 50.000 11.70 3.29 40.80 3.61
421 555 0.951558 CGGTAAAGCTGTTGCCTTGT 59.048 50.000 11.70 0.00 40.80 3.16
422 556 1.334960 CGGTAAAGCTGTTGCCTTGTG 60.335 52.381 11.70 0.00 40.80 3.33
423 557 1.953686 GGTAAAGCTGTTGCCTTGTGA 59.046 47.619 7.98 0.00 40.80 3.58
424 558 2.287608 GGTAAAGCTGTTGCCTTGTGAC 60.288 50.000 7.98 0.00 40.80 3.67
425 559 0.746659 AAAGCTGTTGCCTTGTGACC 59.253 50.000 0.00 0.00 40.80 4.02
426 560 0.395586 AAGCTGTTGCCTTGTGACCA 60.396 50.000 0.00 0.00 40.80 4.02
427 561 0.178981 AGCTGTTGCCTTGTGACCAT 60.179 50.000 0.00 0.00 40.80 3.55
428 562 0.242017 GCTGTTGCCTTGTGACCATC 59.758 55.000 0.00 0.00 0.00 3.51
429 563 1.608055 CTGTTGCCTTGTGACCATCA 58.392 50.000 0.00 0.00 0.00 3.07
430 564 1.538512 CTGTTGCCTTGTGACCATCAG 59.461 52.381 0.00 0.00 0.00 2.90
431 565 0.883833 GTTGCCTTGTGACCATCAGG 59.116 55.000 0.00 0.00 42.21 3.86
443 577 2.455674 CCATCAGGTCACGAGTTTGA 57.544 50.000 0.00 0.00 0.00 2.69
444 578 2.341257 CCATCAGGTCACGAGTTTGAG 58.659 52.381 0.00 0.00 0.00 3.02
445 579 2.289072 CCATCAGGTCACGAGTTTGAGT 60.289 50.000 0.00 0.00 0.00 3.41
446 580 3.393800 CATCAGGTCACGAGTTTGAGTT 58.606 45.455 0.00 0.00 0.00 3.01
447 581 3.093717 TCAGGTCACGAGTTTGAGTTC 57.906 47.619 0.00 0.00 0.00 3.01
448 582 2.693591 TCAGGTCACGAGTTTGAGTTCT 59.306 45.455 0.00 0.00 0.00 3.01
449 583 2.797156 CAGGTCACGAGTTTGAGTTCTG 59.203 50.000 0.00 0.00 0.00 3.02
450 584 2.135933 GGTCACGAGTTTGAGTTCTGG 58.864 52.381 0.00 0.00 0.00 3.86
451 585 2.223971 GGTCACGAGTTTGAGTTCTGGA 60.224 50.000 0.00 0.00 0.00 3.86
452 586 3.454375 GTCACGAGTTTGAGTTCTGGAA 58.546 45.455 0.00 0.00 0.00 3.53
453 587 3.491267 GTCACGAGTTTGAGTTCTGGAAG 59.509 47.826 0.00 0.00 0.00 3.46
454 588 2.221981 CACGAGTTTGAGTTCTGGAAGC 59.778 50.000 0.00 0.00 0.00 3.86
455 589 2.158957 ACGAGTTTGAGTTCTGGAAGCA 60.159 45.455 0.00 0.00 0.00 3.91
456 590 2.478134 CGAGTTTGAGTTCTGGAAGCAG 59.522 50.000 0.00 0.00 0.00 4.24
457 591 2.225255 GAGTTTGAGTTCTGGAAGCAGC 59.775 50.000 0.00 0.00 0.00 5.25
458 592 1.268079 GTTTGAGTTCTGGAAGCAGCC 59.732 52.381 0.00 0.00 0.00 4.85
459 593 0.767375 TTGAGTTCTGGAAGCAGCCT 59.233 50.000 0.00 0.00 0.00 4.58
460 594 0.322975 TGAGTTCTGGAAGCAGCCTC 59.677 55.000 0.00 0.00 0.00 4.70
461 595 0.612744 GAGTTCTGGAAGCAGCCTCT 59.387 55.000 0.00 0.00 0.00 3.69
462 596 1.827969 GAGTTCTGGAAGCAGCCTCTA 59.172 52.381 0.00 0.00 0.00 2.43
463 597 2.234908 GAGTTCTGGAAGCAGCCTCTAA 59.765 50.000 0.00 0.00 0.00 2.10
464 598 2.027653 AGTTCTGGAAGCAGCCTCTAAC 60.028 50.000 0.00 0.00 0.00 2.34
465 599 1.644509 TCTGGAAGCAGCCTCTAACA 58.355 50.000 0.00 0.00 0.00 2.41
466 600 1.552337 TCTGGAAGCAGCCTCTAACAG 59.448 52.381 0.00 0.00 0.00 3.16
467 601 1.552337 CTGGAAGCAGCCTCTAACAGA 59.448 52.381 0.00 0.00 0.00 3.41
468 602 1.977854 TGGAAGCAGCCTCTAACAGAA 59.022 47.619 0.00 0.00 0.00 3.02
469 603 2.371841 TGGAAGCAGCCTCTAACAGAAA 59.628 45.455 0.00 0.00 0.00 2.52
470 604 3.009473 TGGAAGCAGCCTCTAACAGAAAT 59.991 43.478 0.00 0.00 0.00 2.17
471 605 3.376546 GGAAGCAGCCTCTAACAGAAATG 59.623 47.826 0.00 0.00 0.00 2.32
472 606 3.710209 AGCAGCCTCTAACAGAAATGT 57.290 42.857 0.00 0.00 0.00 2.71
473 607 4.826274 AGCAGCCTCTAACAGAAATGTA 57.174 40.909 0.00 0.00 0.00 2.29
474 608 4.764172 AGCAGCCTCTAACAGAAATGTAG 58.236 43.478 0.00 0.00 0.00 2.74
475 609 3.873952 GCAGCCTCTAACAGAAATGTAGG 59.126 47.826 0.00 0.00 0.00 3.18
476 610 4.446371 CAGCCTCTAACAGAAATGTAGGG 58.554 47.826 0.00 0.00 0.00 3.53
477 611 4.162320 CAGCCTCTAACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
478 612 4.783227 AGCCTCTAACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
479 613 5.250774 AGCCTCTAACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
480 614 5.586643 GCCTCTAACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
481 615 6.576442 GCCTCTAACAGAAATGTAGGGAAAGA 60.576 42.308 0.00 0.00 0.00 2.52
482 616 6.819146 CCTCTAACAGAAATGTAGGGAAAGAC 59.181 42.308 0.00 0.00 0.00 3.01
483 617 7.310734 CCTCTAACAGAAATGTAGGGAAAGACT 60.311 40.741 0.00 0.00 0.00 3.24
484 618 7.386851 TCTAACAGAAATGTAGGGAAAGACTG 58.613 38.462 0.00 0.00 0.00 3.51
485 619 4.327680 ACAGAAATGTAGGGAAAGACTGC 58.672 43.478 0.00 0.00 0.00 4.40
486 620 3.691609 CAGAAATGTAGGGAAAGACTGCC 59.308 47.826 0.00 0.00 35.18 4.85
488 622 4.783227 AGAAATGTAGGGAAAGACTGCCTA 59.217 41.667 0.00 0.00 45.85 3.93
495 629 5.405063 AGGGAAAGACTGCCTACTATAGA 57.595 43.478 6.78 0.00 45.85 1.98
496 630 5.971493 AGGGAAAGACTGCCTACTATAGAT 58.029 41.667 6.78 0.00 45.85 1.98
497 631 6.014012 AGGGAAAGACTGCCTACTATAGATC 58.986 44.000 6.78 0.00 45.85 2.75
498 632 5.186215 GGGAAAGACTGCCTACTATAGATCC 59.814 48.000 6.78 0.00 31.27 3.36
499 633 5.775701 GGAAAGACTGCCTACTATAGATCCA 59.224 44.000 6.78 0.00 0.00 3.41
500 634 6.267928 GGAAAGACTGCCTACTATAGATCCAA 59.732 42.308 6.78 0.00 0.00 3.53
501 635 7.202011 GGAAAGACTGCCTACTATAGATCCAAA 60.202 40.741 6.78 0.00 0.00 3.28
502 636 6.909550 AGACTGCCTACTATAGATCCAAAG 57.090 41.667 6.78 0.00 0.00 2.77
503 637 6.377912 AGACTGCCTACTATAGATCCAAAGT 58.622 40.000 6.78 2.92 0.00 2.66
504 638 6.266558 AGACTGCCTACTATAGATCCAAAGTG 59.733 42.308 6.78 0.00 0.00 3.16
505 639 5.305644 ACTGCCTACTATAGATCCAAAGTGG 59.694 44.000 6.78 0.00 39.43 4.00
506 640 5.216622 TGCCTACTATAGATCCAAAGTGGT 58.783 41.667 6.78 0.00 39.03 4.16
507 641 5.665812 TGCCTACTATAGATCCAAAGTGGTT 59.334 40.000 6.78 0.00 39.03 3.67
508 642 6.842280 TGCCTACTATAGATCCAAAGTGGTTA 59.158 38.462 6.78 0.00 39.03 2.85
509 643 7.015292 TGCCTACTATAGATCCAAAGTGGTTAG 59.985 40.741 6.78 0.00 39.03 2.34
510 644 7.232941 GCCTACTATAGATCCAAAGTGGTTAGA 59.767 40.741 6.78 0.00 39.03 2.10
511 645 8.578151 CCTACTATAGATCCAAAGTGGTTAGAC 58.422 40.741 6.78 0.00 39.03 2.59
512 646 7.362802 ACTATAGATCCAAAGTGGTTAGACC 57.637 40.000 6.78 0.00 39.03 3.85
513 647 5.632034 ATAGATCCAAAGTGGTTAGACCC 57.368 43.478 0.00 0.00 39.03 4.46
514 648 3.532102 AGATCCAAAGTGGTTAGACCCT 58.468 45.455 0.00 0.00 39.03 4.34
515 649 3.916989 AGATCCAAAGTGGTTAGACCCTT 59.083 43.478 0.00 0.00 39.03 3.95
516 650 4.354087 AGATCCAAAGTGGTTAGACCCTTT 59.646 41.667 7.38 7.38 38.45 3.11
517 651 4.094830 TCCAAAGTGGTTAGACCCTTTC 57.905 45.455 9.28 0.00 36.95 2.62
518 652 3.154710 CCAAAGTGGTTAGACCCTTTCC 58.845 50.000 9.28 0.00 36.95 3.13
519 653 3.181433 CCAAAGTGGTTAGACCCTTTCCT 60.181 47.826 9.28 0.00 36.95 3.36
520 654 3.790089 AAGTGGTTAGACCCTTTCCTG 57.210 47.619 0.00 0.00 37.50 3.86
521 655 1.985895 AGTGGTTAGACCCTTTCCTGG 59.014 52.381 0.00 0.00 37.50 4.45
522 656 1.982958 GTGGTTAGACCCTTTCCTGGA 59.017 52.381 0.00 0.00 37.50 3.86
523 657 1.982958 TGGTTAGACCCTTTCCTGGAC 59.017 52.381 0.00 0.00 37.50 4.02
524 658 1.281287 GGTTAGACCCTTTCCTGGACC 59.719 57.143 0.00 0.00 30.04 4.46
525 659 1.281287 GTTAGACCCTTTCCTGGACCC 59.719 57.143 0.00 0.00 0.00 4.46
526 660 0.797579 TAGACCCTTTCCTGGACCCT 59.202 55.000 0.00 0.00 0.00 4.34
527 661 0.842467 AGACCCTTTCCTGGACCCTG 60.842 60.000 0.00 0.00 0.00 4.45
528 662 2.356667 CCCTTTCCTGGACCCTGC 59.643 66.667 0.00 0.00 0.00 4.85
529 663 2.045926 CCTTTCCTGGACCCTGCG 60.046 66.667 0.00 0.00 0.00 5.18
530 664 2.747855 CTTTCCTGGACCCTGCGC 60.748 66.667 0.00 0.00 0.00 6.09
531 665 3.551496 CTTTCCTGGACCCTGCGCA 62.551 63.158 10.98 10.98 0.00 6.09
532 666 3.126703 TTTCCTGGACCCTGCGCAA 62.127 57.895 13.05 0.00 0.00 4.85
533 667 2.424842 TTTCCTGGACCCTGCGCAAT 62.425 55.000 13.05 0.00 0.00 3.56
534 668 1.558167 TTCCTGGACCCTGCGCAATA 61.558 55.000 13.05 0.00 0.00 1.90
535 669 1.819632 CCTGGACCCTGCGCAATAC 60.820 63.158 13.05 0.65 0.00 1.89
536 670 1.078497 CTGGACCCTGCGCAATACA 60.078 57.895 13.05 6.10 0.00 2.29
537 671 0.464373 CTGGACCCTGCGCAATACAT 60.464 55.000 13.05 0.00 0.00 2.29
538 672 0.833949 TGGACCCTGCGCAATACATA 59.166 50.000 13.05 0.00 0.00 2.29
539 673 1.226746 GGACCCTGCGCAATACATAC 58.773 55.000 13.05 0.00 0.00 2.39
540 674 1.474320 GGACCCTGCGCAATACATACA 60.474 52.381 13.05 0.00 0.00 2.29
541 675 2.285083 GACCCTGCGCAATACATACAA 58.715 47.619 13.05 0.00 0.00 2.41
542 676 2.680841 GACCCTGCGCAATACATACAAA 59.319 45.455 13.05 0.00 0.00 2.83
543 677 2.422127 ACCCTGCGCAATACATACAAAC 59.578 45.455 13.05 0.00 0.00 2.93
544 678 2.421775 CCCTGCGCAATACATACAAACA 59.578 45.455 13.05 0.00 0.00 2.83
545 679 3.487376 CCCTGCGCAATACATACAAACAG 60.487 47.826 13.05 0.00 0.00 3.16
546 680 3.373748 CCTGCGCAATACATACAAACAGA 59.626 43.478 13.05 0.00 0.00 3.41
547 681 4.142708 CCTGCGCAATACATACAAACAGAA 60.143 41.667 13.05 0.00 0.00 3.02
548 682 4.968626 TGCGCAATACATACAAACAGAAG 58.031 39.130 8.16 0.00 0.00 2.85
549 683 4.693095 TGCGCAATACATACAAACAGAAGA 59.307 37.500 8.16 0.00 0.00 2.87
550 684 5.180304 TGCGCAATACATACAAACAGAAGAA 59.820 36.000 8.16 0.00 0.00 2.52
551 685 6.083630 GCGCAATACATACAAACAGAAGAAA 58.916 36.000 0.30 0.00 0.00 2.52
552 686 6.249260 GCGCAATACATACAAACAGAAGAAAG 59.751 38.462 0.30 0.00 0.00 2.62
553 687 6.742718 CGCAATACATACAAACAGAAGAAAGG 59.257 38.462 0.00 0.00 0.00 3.11
554 688 7.360861 CGCAATACATACAAACAGAAGAAAGGA 60.361 37.037 0.00 0.00 0.00 3.36
555 689 7.965107 GCAATACATACAAACAGAAGAAAGGAG 59.035 37.037 0.00 0.00 0.00 3.69
556 690 9.219603 CAATACATACAAACAGAAGAAAGGAGA 57.780 33.333 0.00 0.00 0.00 3.71
557 691 8.779354 ATACATACAAACAGAAGAAAGGAGAC 57.221 34.615 0.00 0.00 0.00 3.36
558 692 5.998363 ACATACAAACAGAAGAAAGGAGACC 59.002 40.000 0.00 0.00 0.00 3.85
559 693 4.503714 ACAAACAGAAGAAAGGAGACCA 57.496 40.909 0.00 0.00 0.00 4.02
560 694 4.855340 ACAAACAGAAGAAAGGAGACCAA 58.145 39.130 0.00 0.00 0.00 3.67
561 695 5.449553 ACAAACAGAAGAAAGGAGACCAAT 58.550 37.500 0.00 0.00 0.00 3.16
562 696 5.893824 ACAAACAGAAGAAAGGAGACCAATT 59.106 36.000 0.00 0.00 0.00 2.32
563 697 6.183360 ACAAACAGAAGAAAGGAGACCAATTG 60.183 38.462 0.00 0.00 0.00 2.32
564 698 3.823304 ACAGAAGAAAGGAGACCAATTGC 59.177 43.478 0.00 0.00 0.00 3.56
565 699 3.822735 CAGAAGAAAGGAGACCAATTGCA 59.177 43.478 0.00 0.00 0.00 4.08
566 700 4.461781 CAGAAGAAAGGAGACCAATTGCAT 59.538 41.667 0.00 0.00 0.00 3.96
567 701 5.047519 CAGAAGAAAGGAGACCAATTGCATT 60.048 40.000 0.00 0.00 0.00 3.56
568 702 4.796038 AGAAAGGAGACCAATTGCATTG 57.204 40.909 0.00 0.00 39.94 2.82
616 750 2.882927 ATTGCTGGCAATGCTGTATG 57.117 45.000 18.34 0.00 44.05 2.39
617 751 0.818938 TTGCTGGCAATGCTGTATGG 59.181 50.000 4.82 0.00 0.00 2.74
618 752 0.323633 TGCTGGCAATGCTGTATGGT 60.324 50.000 4.82 0.00 0.00 3.55
619 753 0.101759 GCTGGCAATGCTGTATGGTG 59.898 55.000 4.82 0.00 0.00 4.17
620 754 0.742505 CTGGCAATGCTGTATGGTGG 59.257 55.000 4.82 0.00 0.00 4.61
621 755 0.039472 TGGCAATGCTGTATGGTGGT 59.961 50.000 4.82 0.00 0.00 4.16
622 756 0.740737 GGCAATGCTGTATGGTGGTC 59.259 55.000 4.82 0.00 0.00 4.02
623 757 1.462616 GCAATGCTGTATGGTGGTCA 58.537 50.000 0.00 0.00 0.00 4.02
624 758 2.026641 GCAATGCTGTATGGTGGTCAT 58.973 47.619 0.00 0.00 39.78 3.06
625 759 2.428171 GCAATGCTGTATGGTGGTCATT 59.572 45.455 0.00 0.00 37.30 2.57
626 760 3.119029 GCAATGCTGTATGGTGGTCATTT 60.119 43.478 0.00 0.00 37.30 2.32
627 761 4.097741 GCAATGCTGTATGGTGGTCATTTA 59.902 41.667 0.00 0.00 37.30 1.40
628 762 5.394005 GCAATGCTGTATGGTGGTCATTTAA 60.394 40.000 0.00 0.00 37.30 1.52
629 763 6.629128 CAATGCTGTATGGTGGTCATTTAAA 58.371 36.000 0.00 0.00 37.30 1.52
630 764 6.849085 ATGCTGTATGGTGGTCATTTAAAA 57.151 33.333 0.00 0.00 37.30 1.52
631 765 6.019779 TGCTGTATGGTGGTCATTTAAAAC 57.980 37.500 0.00 0.00 37.30 2.43
632 766 5.772672 TGCTGTATGGTGGTCATTTAAAACT 59.227 36.000 0.00 0.00 37.30 2.66
633 767 6.943146 TGCTGTATGGTGGTCATTTAAAACTA 59.057 34.615 0.00 0.00 37.30 2.24
634 768 7.120579 TGCTGTATGGTGGTCATTTAAAACTAG 59.879 37.037 0.00 0.00 37.30 2.57
635 769 7.335924 GCTGTATGGTGGTCATTTAAAACTAGA 59.664 37.037 0.00 0.00 37.30 2.43
636 770 8.786826 TGTATGGTGGTCATTTAAAACTAGAG 57.213 34.615 0.00 0.00 37.30 2.43
637 771 8.598916 TGTATGGTGGTCATTTAAAACTAGAGA 58.401 33.333 0.00 0.00 37.30 3.10
638 772 9.614792 GTATGGTGGTCATTTAAAACTAGAGAT 57.385 33.333 0.00 0.00 37.30 2.75
639 773 8.738645 ATGGTGGTCATTTAAAACTAGAGATC 57.261 34.615 0.00 0.00 30.55 2.75
640 774 7.110155 TGGTGGTCATTTAAAACTAGAGATCC 58.890 38.462 0.00 0.00 0.00 3.36
641 775 6.542735 GGTGGTCATTTAAAACTAGAGATCCC 59.457 42.308 0.00 0.00 0.00 3.85
642 776 7.110155 GTGGTCATTTAAAACTAGAGATCCCA 58.890 38.462 0.00 0.00 0.00 4.37
643 777 7.610305 GTGGTCATTTAAAACTAGAGATCCCAA 59.390 37.037 0.00 0.00 0.00 4.12
644 778 8.336235 TGGTCATTTAAAACTAGAGATCCCAAT 58.664 33.333 0.00 0.00 0.00 3.16
645 779 8.624776 GGTCATTTAAAACTAGAGATCCCAATG 58.375 37.037 0.00 0.00 0.00 2.82
652 786 2.134789 AGAGATCCCAATGGTGCAAC 57.865 50.000 0.00 0.00 0.00 4.17
677 811 5.596361 TCCACCAAACTTTTGAAGCTCAATA 59.404 36.000 3.17 0.00 40.55 1.90
685 819 8.667076 AACTTTTGAAGCTCAATATTTGCTTT 57.333 26.923 20.04 9.32 45.56 3.51
692 826 7.710044 TGAAGCTCAATATTTGCTTTGACAAAA 59.290 29.630 20.04 0.00 45.56 2.44
701 835 6.415798 TTTGCTTTGACAAAAGTTTTAGCC 57.584 33.333 14.48 3.29 44.02 3.93
711 845 1.530323 AGTTTTAGCCGTTTCGCCAT 58.470 45.000 0.00 0.00 0.00 4.40
722 856 4.792704 GCCGTTTCGCCATAAAATGATGAT 60.793 41.667 0.00 0.00 0.00 2.45
726 860 3.073678 TCGCCATAAAATGATGATCCCG 58.926 45.455 0.00 0.00 0.00 5.14
727 861 2.813754 CGCCATAAAATGATGATCCCGT 59.186 45.455 0.00 0.00 0.00 5.28
729 863 3.820467 GCCATAAAATGATGATCCCGTGA 59.180 43.478 0.00 0.00 0.00 4.35
730 864 4.460382 GCCATAAAATGATGATCCCGTGAT 59.540 41.667 0.00 0.00 0.00 3.06
731 865 5.620654 GCCATAAAATGATGATCCCGTGATG 60.621 44.000 0.00 0.00 0.00 3.07
732 866 5.706833 CCATAAAATGATGATCCCGTGATGA 59.293 40.000 0.00 0.00 0.00 2.92
733 867 6.376299 CCATAAAATGATGATCCCGTGATGAT 59.624 38.462 0.00 0.00 0.00 2.45
734 868 7.094075 CCATAAAATGATGATCCCGTGATGATT 60.094 37.037 0.00 0.00 0.00 2.57
735 869 5.700722 AAATGATGATCCCGTGATGATTG 57.299 39.130 0.00 0.00 0.00 2.67
736 870 4.628963 ATGATGATCCCGTGATGATTGA 57.371 40.909 0.00 0.00 0.00 2.57
737 871 4.628963 TGATGATCCCGTGATGATTGAT 57.371 40.909 0.00 0.00 0.00 2.57
738 872 4.320870 TGATGATCCCGTGATGATTGATG 58.679 43.478 0.00 0.00 0.00 3.07
739 873 4.040706 TGATGATCCCGTGATGATTGATGA 59.959 41.667 0.00 0.00 0.00 2.92
740 874 4.420522 TGATCCCGTGATGATTGATGAA 57.579 40.909 0.00 0.00 0.00 2.57
741 875 4.976864 TGATCCCGTGATGATTGATGAAT 58.023 39.130 0.00 0.00 0.00 2.57
750 884 5.066375 GTGATGATTGATGAATTCCCAACGA 59.934 40.000 11.14 3.83 0.00 3.85
754 888 2.560504 TGATGAATTCCCAACGATCGG 58.439 47.619 20.98 1.81 0.00 4.18
782 916 2.015736 ACCGTGCTGCTGATTTAGAG 57.984 50.000 0.00 0.00 0.00 2.43
819 953 9.061610 GTACAAAAGAATTCCGTTGAATATGTG 57.938 33.333 20.10 5.18 40.34 3.21
831 965 2.287644 TGAATATGTGCCGCGATCAAAG 59.712 45.455 8.23 0.00 0.00 2.77
849 983 4.155733 TACTGACCCGCCGCCATG 62.156 66.667 0.00 0.00 0.00 3.66
862 996 4.477413 CCATGGCTGAGATGGCTC 57.523 61.111 0.00 0.00 41.67 4.70
863 997 1.597302 CCATGGCTGAGATGGCTCG 60.597 63.158 0.00 0.00 44.33 5.03
864 998 2.110627 ATGGCTGAGATGGCTCGC 59.889 61.111 0.00 0.00 44.33 5.03
867 1001 4.212913 GCTGAGATGGCTCGCCGA 62.213 66.667 3.14 0.00 44.33 5.54
904 1068 1.389445 GCTCGAGCAATCGCATATCAG 59.611 52.381 31.91 0.00 42.27 2.90
908 1072 2.159867 CGAGCAATCGCATATCAGAAGC 60.160 50.000 0.00 0.00 42.27 3.86
909 1073 2.804527 GAGCAATCGCATATCAGAAGCA 59.195 45.455 0.00 0.00 42.27 3.91
910 1074 2.806818 AGCAATCGCATATCAGAAGCAG 59.193 45.455 0.00 0.00 42.27 4.24
966 1130 4.170062 CGCTAGACGCCGAACCGA 62.170 66.667 0.00 0.00 34.21 4.69
967 1131 2.578981 GCTAGACGCCGAACCGAC 60.579 66.667 0.00 0.00 0.00 4.79
968 1132 3.048941 GCTAGACGCCGAACCGACT 62.049 63.158 0.00 0.00 37.10 4.18
1131 1314 2.181021 GCCGACGAGTACACCCTG 59.819 66.667 0.00 0.00 0.00 4.45
1691 1874 0.040781 GAGTCGCTGGAGATCTACGC 60.041 60.000 10.60 10.60 0.00 4.42
1692 1875 1.369448 GTCGCTGGAGATCTACGCG 60.369 63.158 27.39 27.39 44.63 6.01
2022 2205 3.462678 GTCTGGAGGCTCGACCCC 61.463 72.222 8.69 0.00 40.58 4.95
2475 2658 1.065928 GTACGGCAGGGAGATCGTG 59.934 63.158 0.00 0.00 37.10 4.35
2557 2740 0.175073 GTAGGTAGGTTCAGCCGGTG 59.825 60.000 1.90 0.00 43.70 4.94
2627 2810 1.527380 TGGCGGCCTCTTTTTCGTT 60.527 52.632 21.46 0.00 0.00 3.85
2640 2823 2.772568 TTTCGTTGACACCTGCATTG 57.227 45.000 0.00 0.00 0.00 2.82
2641 2824 1.674359 TTCGTTGACACCTGCATTGT 58.326 45.000 0.80 0.80 0.00 2.71
2642 2825 1.674359 TCGTTGACACCTGCATTGTT 58.326 45.000 2.81 0.00 0.00 2.83
2643 2826 2.020720 TCGTTGACACCTGCATTGTTT 58.979 42.857 2.81 0.00 0.00 2.83
2644 2827 3.206964 TCGTTGACACCTGCATTGTTTA 58.793 40.909 2.81 0.00 0.00 2.01
2645 2828 3.002862 TCGTTGACACCTGCATTGTTTAC 59.997 43.478 2.81 4.10 0.00 2.01
2646 2829 3.242903 CGTTGACACCTGCATTGTTTACA 60.243 43.478 2.81 0.00 0.00 2.41
2647 2830 4.290155 GTTGACACCTGCATTGTTTACAG 58.710 43.478 2.81 0.00 0.00 2.74
2648 2831 3.550820 TGACACCTGCATTGTTTACAGT 58.449 40.909 2.81 0.00 0.00 3.55
2649 2832 3.314913 TGACACCTGCATTGTTTACAGTG 59.685 43.478 2.81 1.44 36.76 3.66
2650 2833 2.622942 ACACCTGCATTGTTTACAGTGG 59.377 45.455 7.37 0.00 34.62 4.00
2651 2834 1.613437 ACCTGCATTGTTTACAGTGGC 59.387 47.619 7.37 2.51 34.62 5.01
2652 2835 1.401409 CCTGCATTGTTTACAGTGGCG 60.401 52.381 7.37 0.00 34.62 5.69
2653 2836 1.266718 CTGCATTGTTTACAGTGGCGT 59.733 47.619 7.37 0.00 34.62 5.68
2654 2837 2.482336 CTGCATTGTTTACAGTGGCGTA 59.518 45.455 7.37 0.00 34.62 4.42
2655 2838 2.482336 TGCATTGTTTACAGTGGCGTAG 59.518 45.455 7.37 0.00 34.62 3.51
2668 2851 4.427394 CGTAGCCACATCAGAGCC 57.573 61.111 0.00 0.00 0.00 4.70
2669 2852 1.517361 CGTAGCCACATCAGAGCCA 59.483 57.895 0.00 0.00 0.00 4.75
2670 2853 0.807667 CGTAGCCACATCAGAGCCAC 60.808 60.000 0.00 0.00 0.00 5.01
2671 2854 0.807667 GTAGCCACATCAGAGCCACG 60.808 60.000 0.00 0.00 0.00 4.94
2672 2855 2.578163 TAGCCACATCAGAGCCACGC 62.578 60.000 0.00 0.00 0.00 5.34
2673 2856 2.821366 CCACATCAGAGCCACGCC 60.821 66.667 0.00 0.00 0.00 5.68
2674 2857 2.821366 CACATCAGAGCCACGCCC 60.821 66.667 0.00 0.00 0.00 6.13
2675 2858 4.101448 ACATCAGAGCCACGCCCC 62.101 66.667 0.00 0.00 0.00 5.80
2689 2872 4.452733 CCCCGGACCAAGCTCGTC 62.453 72.222 0.73 5.52 0.00 4.20
2690 2873 4.796231 CCCGGACCAAGCTCGTCG 62.796 72.222 0.73 0.00 0.00 5.12
2701 2884 3.689224 GCTCGTCGCTACAGTAACA 57.311 52.632 0.00 0.00 35.14 2.41
2702 2885 1.973138 GCTCGTCGCTACAGTAACAA 58.027 50.000 0.00 0.00 35.14 2.83
2703 2886 2.322161 GCTCGTCGCTACAGTAACAAA 58.678 47.619 0.00 0.00 35.14 2.83
2704 2887 2.090195 GCTCGTCGCTACAGTAACAAAC 59.910 50.000 0.00 0.00 35.14 2.93
2705 2888 3.302555 CTCGTCGCTACAGTAACAAACA 58.697 45.455 0.00 0.00 0.00 2.83
2706 2889 3.302555 TCGTCGCTACAGTAACAAACAG 58.697 45.455 0.00 0.00 0.00 3.16
2707 2890 3.047796 CGTCGCTACAGTAACAAACAGT 58.952 45.455 0.00 0.00 0.00 3.55
2708 2891 4.024133 TCGTCGCTACAGTAACAAACAGTA 60.024 41.667 0.00 0.00 0.00 2.74
2709 2892 4.087648 CGTCGCTACAGTAACAAACAGTAC 59.912 45.833 0.00 0.00 0.00 2.73
2710 2893 5.218139 GTCGCTACAGTAACAAACAGTACT 58.782 41.667 0.00 0.00 0.00 2.73
2711 2894 6.373779 GTCGCTACAGTAACAAACAGTACTA 58.626 40.000 0.00 0.00 0.00 1.82
2712 2895 6.857964 GTCGCTACAGTAACAAACAGTACTAA 59.142 38.462 0.00 0.00 0.00 2.24
2713 2896 7.379529 GTCGCTACAGTAACAAACAGTACTAAA 59.620 37.037 0.00 0.00 0.00 1.85
2714 2897 7.379529 TCGCTACAGTAACAAACAGTACTAAAC 59.620 37.037 0.00 0.00 0.00 2.01
2715 2898 7.167968 CGCTACAGTAACAAACAGTACTAAACA 59.832 37.037 0.00 0.00 0.00 2.83
2716 2899 8.485591 GCTACAGTAACAAACAGTACTAAACAG 58.514 37.037 0.00 0.00 0.00 3.16
2717 2900 9.525409 CTACAGTAACAAACAGTACTAAACAGT 57.475 33.333 0.00 0.00 0.00 3.55
2718 2901 8.782339 ACAGTAACAAACAGTACTAAACAGTT 57.218 30.769 0.00 0.34 39.29 3.16
2719 2902 8.876790 ACAGTAACAAACAGTACTAAACAGTTC 58.123 33.333 0.00 0.00 36.86 3.01
2720 2903 9.095065 CAGTAACAAACAGTACTAAACAGTTCT 57.905 33.333 0.00 0.00 36.86 3.01
2746 2929 0.737219 GCATCAAGCTGCTAACCTGG 59.263 55.000 0.90 0.00 41.15 4.45
2747 2930 1.386533 CATCAAGCTGCTAACCTGGG 58.613 55.000 0.90 0.00 0.00 4.45
2748 2931 0.257039 ATCAAGCTGCTAACCTGGGG 59.743 55.000 0.90 0.00 0.00 4.96
2749 2932 2.048603 CAAGCTGCTAACCTGGGGC 61.049 63.158 0.90 0.00 0.00 5.80
2750 2933 3.288137 AAGCTGCTAACCTGGGGCC 62.288 63.158 0.90 0.00 0.00 5.80
2751 2934 3.732849 GCTGCTAACCTGGGGCCT 61.733 66.667 0.84 0.00 0.00 5.19
2752 2935 2.375345 GCTGCTAACCTGGGGCCTA 61.375 63.158 0.84 0.00 0.00 3.93
2753 2936 1.832912 CTGCTAACCTGGGGCCTAG 59.167 63.158 10.44 10.44 0.00 3.02
2754 2937 2.330924 CTGCTAACCTGGGGCCTAGC 62.331 65.000 12.12 12.80 37.70 3.42
2755 2938 2.073101 GCTAACCTGGGGCCTAGCT 61.073 63.158 12.12 3.11 35.68 3.32
2756 2939 0.763223 GCTAACCTGGGGCCTAGCTA 60.763 60.000 12.12 4.19 35.68 3.32
2757 2940 1.049402 CTAACCTGGGGCCTAGCTAC 58.951 60.000 12.12 0.00 0.00 3.58
2758 2941 0.757935 TAACCTGGGGCCTAGCTACG 60.758 60.000 12.12 0.00 0.00 3.51
2759 2942 3.930012 CCTGGGGCCTAGCTACGC 61.930 72.222 12.12 6.20 0.00 4.42
2760 2943 3.930012 CTGGGGCCTAGCTACGCC 61.930 72.222 21.66 21.66 44.92 5.68
2764 2947 3.292936 GGCCTAGCTACGCCGCTA 61.293 66.667 16.57 6.17 41.30 4.26
2769 2952 3.391736 TAGCTACGCCGCTAGAGAA 57.608 52.632 0.00 0.00 41.30 2.87
2770 2953 1.893544 TAGCTACGCCGCTAGAGAAT 58.106 50.000 0.00 0.00 41.30 2.40
2771 2954 1.033574 AGCTACGCCGCTAGAGAATT 58.966 50.000 0.00 0.00 38.76 2.17
2772 2955 1.132588 GCTACGCCGCTAGAGAATTG 58.867 55.000 0.00 0.00 0.00 2.32
2773 2956 1.536284 GCTACGCCGCTAGAGAATTGT 60.536 52.381 0.00 0.00 0.00 2.71
2774 2957 2.386249 CTACGCCGCTAGAGAATTGTC 58.614 52.381 0.00 0.00 0.00 3.18
2775 2958 0.818296 ACGCCGCTAGAGAATTGTCT 59.182 50.000 10.33 10.33 36.55 3.41
2789 2972 6.496338 AGAATTGTCTCGTTAAATTGACCC 57.504 37.500 0.00 0.00 0.00 4.46
2790 2973 4.939509 ATTGTCTCGTTAAATTGACCCG 57.060 40.909 0.00 0.00 0.00 5.28
2791 2974 2.070783 TGTCTCGTTAAATTGACCCGC 58.929 47.619 0.00 0.00 0.00 6.13
2792 2975 1.060122 GTCTCGTTAAATTGACCCGCG 59.940 52.381 0.00 0.00 0.00 6.46
2793 2976 1.073177 CTCGTTAAATTGACCCGCGT 58.927 50.000 4.92 0.00 0.00 6.01
2794 2977 2.094803 TCTCGTTAAATTGACCCGCGTA 60.095 45.455 4.92 0.00 0.00 4.42
2795 2978 2.861935 CTCGTTAAATTGACCCGCGTAT 59.138 45.455 4.92 0.00 0.00 3.06
2796 2979 4.039151 TCGTTAAATTGACCCGCGTATA 57.961 40.909 4.92 0.00 0.00 1.47
2797 2980 4.428209 TCGTTAAATTGACCCGCGTATAA 58.572 39.130 4.92 0.00 0.00 0.98
2798 2981 5.049167 TCGTTAAATTGACCCGCGTATAAT 58.951 37.500 4.92 0.00 0.00 1.28
2799 2982 6.212235 TCGTTAAATTGACCCGCGTATAATA 58.788 36.000 4.92 0.00 0.00 0.98
2800 2983 6.867816 TCGTTAAATTGACCCGCGTATAATAT 59.132 34.615 4.92 0.00 0.00 1.28
2801 2984 7.062138 TCGTTAAATTGACCCGCGTATAATATC 59.938 37.037 4.92 0.00 0.00 1.63
2802 2985 7.062605 CGTTAAATTGACCCGCGTATAATATCT 59.937 37.037 4.92 0.00 0.00 1.98
2803 2986 8.715088 GTTAAATTGACCCGCGTATAATATCTT 58.285 33.333 4.92 0.00 0.00 2.40
2804 2987 6.721571 AATTGACCCGCGTATAATATCTTG 57.278 37.500 4.92 0.00 0.00 3.02
2805 2988 4.859304 TGACCCGCGTATAATATCTTGT 57.141 40.909 4.92 0.00 0.00 3.16
2806 2989 5.204409 TGACCCGCGTATAATATCTTGTT 57.796 39.130 4.92 0.00 0.00 2.83
2807 2990 6.330004 TGACCCGCGTATAATATCTTGTTA 57.670 37.500 4.92 0.00 0.00 2.41
2808 2991 6.747125 TGACCCGCGTATAATATCTTGTTAA 58.253 36.000 4.92 0.00 0.00 2.01
2809 2992 7.380536 TGACCCGCGTATAATATCTTGTTAAT 58.619 34.615 4.92 0.00 0.00 1.40
2810 2993 8.522003 TGACCCGCGTATAATATCTTGTTAATA 58.478 33.333 4.92 0.00 0.00 0.98
2811 2994 8.922058 ACCCGCGTATAATATCTTGTTAATAG 57.078 34.615 4.92 0.00 0.00 1.73
2812 2995 7.490402 ACCCGCGTATAATATCTTGTTAATAGC 59.510 37.037 4.92 0.00 0.00 2.97
2813 2996 7.490079 CCCGCGTATAATATCTTGTTAATAGCA 59.510 37.037 4.92 0.00 0.00 3.49
2814 2997 9.031360 CCGCGTATAATATCTTGTTAATAGCAT 57.969 33.333 4.92 0.00 0.00 3.79
2815 2998 9.835315 CGCGTATAATATCTTGTTAATAGCATG 57.165 33.333 0.00 0.00 0.00 4.06
2816 2999 9.638300 GCGTATAATATCTTGTTAATAGCATGC 57.362 33.333 10.51 10.51 0.00 4.06
2823 3006 6.951256 TCTTGTTAATAGCATGCTATAGCG 57.049 37.500 34.51 20.83 45.83 4.26
2824 3007 6.455647 TCTTGTTAATAGCATGCTATAGCGT 58.544 36.000 34.51 23.31 45.83 5.07
2850 3033 8.884726 TGTTATAACACGCTAAGCATATTTTCA 58.115 29.630 14.35 0.00 33.17 2.69
2851 3034 9.370126 GTTATAACACGCTAAGCATATTTTCAG 57.630 33.333 10.81 0.00 0.00 3.02
2852 3035 4.882671 ACACGCTAAGCATATTTTCAGG 57.117 40.909 0.00 0.00 0.00 3.86
2853 3036 3.627577 ACACGCTAAGCATATTTTCAGGG 59.372 43.478 0.00 0.00 0.00 4.45
2854 3037 3.003689 CACGCTAAGCATATTTTCAGGGG 59.996 47.826 0.00 0.00 0.00 4.79
2855 3038 2.030805 CGCTAAGCATATTTTCAGGGGC 60.031 50.000 0.00 0.00 0.00 5.80
2856 3039 2.030805 GCTAAGCATATTTTCAGGGGCG 60.031 50.000 0.00 0.00 0.00 6.13
2857 3040 1.402787 AAGCATATTTTCAGGGGCGG 58.597 50.000 0.00 0.00 0.00 6.13
2858 3041 1.109323 AGCATATTTTCAGGGGCGGC 61.109 55.000 0.00 0.00 0.00 6.53
2859 3042 1.654220 CATATTTTCAGGGGCGGCG 59.346 57.895 0.51 0.51 0.00 6.46
2860 3043 1.101049 CATATTTTCAGGGGCGGCGT 61.101 55.000 9.37 0.00 0.00 5.68
2861 3044 0.395173 ATATTTTCAGGGGCGGCGTT 60.395 50.000 9.37 0.00 0.00 4.84
2862 3045 0.252479 TATTTTCAGGGGCGGCGTTA 59.748 50.000 9.37 0.00 0.00 3.18
2863 3046 0.395173 ATTTTCAGGGGCGGCGTTAT 60.395 50.000 9.37 0.00 0.00 1.89
2864 3047 0.609681 TTTTCAGGGGCGGCGTTATT 60.610 50.000 9.37 0.00 0.00 1.40
2865 3048 0.609681 TTTCAGGGGCGGCGTTATTT 60.610 50.000 9.37 0.00 0.00 1.40
2866 3049 0.609681 TTCAGGGGCGGCGTTATTTT 60.610 50.000 9.37 0.00 0.00 1.82
2867 3050 1.138671 CAGGGGCGGCGTTATTTTG 59.861 57.895 9.37 0.00 0.00 2.44
2868 3051 1.303806 AGGGGCGGCGTTATTTTGT 60.304 52.632 9.37 0.00 0.00 2.83
2869 3052 0.035247 AGGGGCGGCGTTATTTTGTA 60.035 50.000 9.37 0.00 0.00 2.41
2870 3053 1.026584 GGGGCGGCGTTATTTTGTAT 58.973 50.000 9.37 0.00 0.00 2.29
2871 3054 2.158784 AGGGGCGGCGTTATTTTGTATA 60.159 45.455 9.37 0.00 0.00 1.47
2872 3055 2.224784 GGGGCGGCGTTATTTTGTATAG 59.775 50.000 9.37 0.00 0.00 1.31
2873 3056 2.350102 GGGCGGCGTTATTTTGTATAGC 60.350 50.000 9.37 0.00 0.00 2.97
2874 3057 2.556806 GCGGCGTTATTTTGTATAGCG 58.443 47.619 9.37 0.00 0.00 4.26
2875 3058 2.033492 GCGGCGTTATTTTGTATAGCGT 60.033 45.455 9.37 0.00 32.17 5.07
2876 3059 3.528121 CGGCGTTATTTTGTATAGCGTG 58.472 45.455 0.00 0.00 32.17 5.34
2877 3060 3.000523 CGGCGTTATTTTGTATAGCGTGT 59.999 43.478 0.00 0.00 32.17 4.49
2878 3061 4.492895 CGGCGTTATTTTGTATAGCGTGTT 60.493 41.667 0.00 0.00 32.17 3.32
2879 3062 4.726704 GGCGTTATTTTGTATAGCGTGTTG 59.273 41.667 0.00 0.00 32.17 3.33
2880 3063 5.318349 GCGTTATTTTGTATAGCGTGTTGT 58.682 37.500 0.00 0.00 32.17 3.32
2881 3064 5.791480 GCGTTATTTTGTATAGCGTGTTGTT 59.209 36.000 0.00 0.00 32.17 2.83
2882 3065 6.303733 GCGTTATTTTGTATAGCGTGTTGTTT 59.696 34.615 0.00 0.00 32.17 2.83
2883 3066 7.149096 GCGTTATTTTGTATAGCGTGTTGTTTT 60.149 33.333 0.00 0.00 32.17 2.43
2884 3067 8.683774 CGTTATTTTGTATAGCGTGTTGTTTTT 58.316 29.630 0.00 0.00 0.00 1.94
2984 3181 7.841282 AGTACTCCATGCTTGTATATGTACT 57.159 36.000 1.08 0.00 34.96 2.73
2985 3182 8.251383 AGTACTCCATGCTTGTATATGTACTT 57.749 34.615 1.08 0.00 35.90 2.24
2986 3183 8.361139 AGTACTCCATGCTTGTATATGTACTTC 58.639 37.037 1.08 0.00 35.90 3.01
2987 3184 6.525629 ACTCCATGCTTGTATATGTACTTCC 58.474 40.000 1.08 0.00 0.00 3.46
2990 3187 7.573710 TCCATGCTTGTATATGTACTTCCTTT 58.426 34.615 1.08 0.00 0.00 3.11
2991 3188 7.498900 TCCATGCTTGTATATGTACTTCCTTTG 59.501 37.037 1.08 0.00 0.00 2.77
2992 3189 7.283127 CCATGCTTGTATATGTACTTCCTTTGT 59.717 37.037 1.08 0.00 0.00 2.83
2994 3191 8.712285 TGCTTGTATATGTACTTCCTTTGTAC 57.288 34.615 1.08 0.00 40.27 2.90
2998 3195 8.518430 TGTATATGTACTTCCTTTGTACCGTA 57.482 34.615 1.08 0.00 39.42 4.02
2999 3196 8.965819 TGTATATGTACTTCCTTTGTACCGTAA 58.034 33.333 1.08 0.00 39.42 3.18
3005 3202 8.632679 TGTACTTCCTTTGTACCGTAATATAGG 58.367 37.037 0.00 0.00 39.42 2.57
3007 3204 7.720442 ACTTCCTTTGTACCGTAATATAGGTC 58.280 38.462 1.29 0.00 41.63 3.85
3009 3206 7.516198 TCCTTTGTACCGTAATATAGGTCTC 57.484 40.000 1.29 0.00 41.63 3.36
3010 3207 7.293073 TCCTTTGTACCGTAATATAGGTCTCT 58.707 38.462 1.29 0.00 41.63 3.10
3012 3209 6.889301 TTGTACCGTAATATAGGTCTCTGG 57.111 41.667 1.29 0.00 41.63 3.86
3013 3210 6.191657 TGTACCGTAATATAGGTCTCTGGA 57.808 41.667 1.29 0.00 41.63 3.86
3014 3211 6.236409 TGTACCGTAATATAGGTCTCTGGAG 58.764 44.000 1.29 0.00 41.63 3.86
3015 3212 5.321934 ACCGTAATATAGGTCTCTGGAGT 57.678 43.478 0.00 0.00 35.50 3.85
3018 3215 5.354792 CCGTAATATAGGTCTCTGGAGTAGC 59.645 48.000 0.00 0.00 0.00 3.58
3019 3216 6.174760 CGTAATATAGGTCTCTGGAGTAGCT 58.825 44.000 0.00 0.00 0.00 3.32
3020 3217 6.092944 CGTAATATAGGTCTCTGGAGTAGCTG 59.907 46.154 0.00 0.00 0.00 4.24
3021 3218 5.851808 ATATAGGTCTCTGGAGTAGCTGA 57.148 43.478 0.00 0.00 0.00 4.26
3022 3219 2.435372 AGGTCTCTGGAGTAGCTGAG 57.565 55.000 0.00 0.00 0.00 3.35
3023 3220 1.638589 AGGTCTCTGGAGTAGCTGAGT 59.361 52.381 0.00 0.00 0.00 3.41
3024 3221 2.847449 AGGTCTCTGGAGTAGCTGAGTA 59.153 50.000 0.00 0.00 0.00 2.59
3026 3223 3.568007 GGTCTCTGGAGTAGCTGAGTATG 59.432 52.174 0.00 0.00 0.00 2.39
3027 3224 4.456535 GTCTCTGGAGTAGCTGAGTATGA 58.543 47.826 0.00 0.00 0.00 2.15
3028 3225 5.070001 GTCTCTGGAGTAGCTGAGTATGAT 58.930 45.833 0.00 0.00 0.00 2.45
3029 3226 5.048782 GTCTCTGGAGTAGCTGAGTATGATG 60.049 48.000 0.00 0.00 0.00 3.07
3030 3227 4.797743 TCTGGAGTAGCTGAGTATGATGT 58.202 43.478 0.00 0.00 0.00 3.06
3072 3279 2.851263 TGCAACCGTAGTTTCCAGAT 57.149 45.000 0.00 0.00 32.45 2.90
3088 3295 4.947883 TCCAGATGGGAATATATCTCCGT 58.052 43.478 0.00 4.16 44.80 4.69
3200 3420 5.653507 GCATTGCCATTTCTGTTTAGATCA 58.346 37.500 0.00 0.00 31.81 2.92
3216 3436 4.206477 AGATCATGGTCGACACAATCAA 57.794 40.909 18.91 0.00 0.00 2.57
3254 3478 7.576861 AAACTCTCCCAACGAATTTCTTTTA 57.423 32.000 0.00 0.00 0.00 1.52
3280 3504 8.680903 AGAGATTGTAAATTCATCGAAGCAAAT 58.319 29.630 0.00 0.00 0.00 2.32
3288 3512 3.804036 TCATCGAAGCAAATAACCGGAT 58.196 40.909 9.46 0.00 0.00 4.18
3290 3514 2.980568 TCGAAGCAAATAACCGGATGT 58.019 42.857 9.46 0.00 0.00 3.06
3296 3520 2.163412 GCAAATAACCGGATGTTGCTCA 59.837 45.455 20.64 0.00 41.04 4.26
3304 3528 1.267806 CGGATGTTGCTCACTTTGCTT 59.732 47.619 0.00 0.00 0.00 3.91
3343 3567 3.144193 CTTCTCCTCGCCTCGCCT 61.144 66.667 0.00 0.00 0.00 5.52
3416 3641 4.397731 ACGCACCGTCTAAGAGCATCTC 62.398 54.545 0.00 0.00 40.01 2.75
3434 3659 3.917760 CAACCGCGCCCCCAAAAA 61.918 61.111 0.00 0.00 0.00 1.94
3435 3660 3.611674 AACCGCGCCCCCAAAAAG 61.612 61.111 0.00 0.00 0.00 2.27
3441 3666 3.003173 GCCCCCAAAAAGGCCTCC 61.003 66.667 5.23 0.00 43.76 4.30
3442 3667 2.284625 CCCCCAAAAAGGCCTCCC 60.285 66.667 5.23 0.00 35.39 4.30
3443 3668 2.284625 CCCCAAAAAGGCCTCCCC 60.285 66.667 5.23 0.00 35.39 4.81
3444 3669 2.530801 CCCAAAAAGGCCTCCCCA 59.469 61.111 5.23 0.00 35.39 4.96
3445 3670 1.610379 CCCAAAAAGGCCTCCCCAG 60.610 63.158 5.23 0.00 35.39 4.45
3446 3671 1.464722 CCAAAAAGGCCTCCCCAGA 59.535 57.895 5.23 0.00 35.39 3.86
3447 3672 0.041684 CCAAAAAGGCCTCCCCAGAT 59.958 55.000 5.23 0.00 35.39 2.90
3448 3673 1.188863 CAAAAAGGCCTCCCCAGATG 58.811 55.000 5.23 0.00 35.39 2.90
3449 3674 0.786435 AAAAAGGCCTCCCCAGATGT 59.214 50.000 5.23 0.00 35.39 3.06
3450 3675 0.786435 AAAAGGCCTCCCCAGATGTT 59.214 50.000 5.23 0.00 35.39 2.71
3451 3676 0.786435 AAAGGCCTCCCCAGATGTTT 59.214 50.000 5.23 0.00 35.39 2.83
3452 3677 0.786435 AAGGCCTCCCCAGATGTTTT 59.214 50.000 5.23 0.00 35.39 2.43
3453 3678 0.786435 AGGCCTCCCCAGATGTTTTT 59.214 50.000 0.00 0.00 35.39 1.94
3469 3694 4.320928 TTTTTCGCGCCGGCACTG 62.321 61.111 28.98 15.47 39.92 3.66
3474 3699 4.320928 CGCGCCGGCACTGAAAAA 62.321 61.111 28.98 0.00 39.92 1.94
3475 3700 2.258286 GCGCCGGCACTGAAAAAT 59.742 55.556 28.98 0.00 39.62 1.82
3476 3701 1.801512 GCGCCGGCACTGAAAAATC 60.802 57.895 28.98 0.00 39.62 2.17
3477 3702 1.511887 CGCCGGCACTGAAAAATCG 60.512 57.895 28.98 0.37 0.00 3.34
3478 3703 1.873165 GCCGGCACTGAAAAATCGA 59.127 52.632 24.80 0.00 0.00 3.59
3479 3704 0.454452 GCCGGCACTGAAAAATCGAC 60.454 55.000 24.80 0.00 0.00 4.20
3480 3705 0.168128 CCGGCACTGAAAAATCGACC 59.832 55.000 0.00 0.00 0.00 4.79
3481 3706 0.168128 CGGCACTGAAAAATCGACCC 59.832 55.000 0.00 0.00 0.00 4.46
3482 3707 1.243902 GGCACTGAAAAATCGACCCA 58.756 50.000 0.00 0.00 0.00 4.51
3483 3708 1.200020 GGCACTGAAAAATCGACCCAG 59.800 52.381 0.00 0.00 0.00 4.45
3484 3709 1.880027 GCACTGAAAAATCGACCCAGT 59.120 47.619 0.00 0.00 38.48 4.00
3485 3710 2.095718 GCACTGAAAAATCGACCCAGTC 60.096 50.000 0.00 0.00 36.09 3.51
3500 3725 4.593864 GTCGCGCCCCAGGAGATC 62.594 72.222 0.00 0.00 0.00 2.75
3503 3728 3.620785 GCGCCCCAGGAGATCGAT 61.621 66.667 0.00 0.00 0.00 3.59
3504 3729 3.142393 CGCCCCAGGAGATCGATT 58.858 61.111 0.00 0.00 0.00 3.34
3505 3730 1.447643 CGCCCCAGGAGATCGATTT 59.552 57.895 0.00 0.00 0.00 2.17
3506 3731 0.179045 CGCCCCAGGAGATCGATTTT 60.179 55.000 0.00 0.00 0.00 1.82
3507 3732 1.598882 GCCCCAGGAGATCGATTTTC 58.401 55.000 0.00 0.55 0.00 2.29
3508 3733 1.871080 CCCCAGGAGATCGATTTTCG 58.129 55.000 0.00 0.00 42.10 3.46
3509 3734 1.221414 CCCAGGAGATCGATTTTCGC 58.779 55.000 0.00 0.00 40.21 4.70
3510 3735 1.221414 CCAGGAGATCGATTTTCGCC 58.779 55.000 0.00 0.00 40.21 5.54
3511 3736 0.855349 CAGGAGATCGATTTTCGCCG 59.145 55.000 0.00 0.00 40.21 6.46
3512 3737 0.249489 AGGAGATCGATTTTCGCCGG 60.249 55.000 0.00 0.00 40.21 6.13
3513 3738 1.565106 GAGATCGATTTTCGCCGGC 59.435 57.895 19.07 19.07 40.21 6.13
3514 3739 1.832411 GAGATCGATTTTCGCCGGCC 61.832 60.000 23.46 4.12 40.21 6.13
3515 3740 2.893449 GATCGATTTTCGCCGGCCC 61.893 63.158 23.46 2.10 40.21 5.80
3529 3754 3.592814 GCCCGGGCCGAATTTAGC 61.593 66.667 36.64 15.74 34.56 3.09
3530 3755 3.276846 CCCGGGCCGAATTTAGCG 61.277 66.667 30.79 7.64 0.00 4.26
3531 3756 3.949047 CCGGGCCGAATTTAGCGC 61.949 66.667 30.79 0.00 38.48 5.92
3532 3757 3.949047 CGGGCCGAATTTAGCGCC 61.949 66.667 24.41 8.25 38.62 6.53
3533 3758 3.949047 GGGCCGAATTTAGCGCCG 61.949 66.667 2.29 0.00 36.04 6.46
3534 3759 3.949047 GGCCGAATTTAGCGCCGG 61.949 66.667 15.00 15.00 44.34 6.13
3536 3761 4.293626 CCGAATTTAGCGCCGGCG 62.294 66.667 43.13 43.13 46.35 6.46
3537 3762 4.293626 CGAATTTAGCGCCGGCGG 62.294 66.667 45.81 29.29 46.35 6.13
3538 3763 2.893404 GAATTTAGCGCCGGCGGA 60.893 61.111 45.81 14.61 46.35 5.54
3539 3764 3.164390 GAATTTAGCGCCGGCGGAC 62.164 63.158 45.81 31.88 46.35 4.79
3540 3765 3.961838 AATTTAGCGCCGGCGGACA 62.962 57.895 45.81 20.14 46.35 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.190325 CGAAGGACATACAGGTCGTC 57.810 55.000 0.00 0.00 38.70 4.20
50 51 2.680841 TCAAATAAGGTCAATTCGGCCG 59.319 45.455 22.12 22.12 0.00 6.13
81 84 7.558161 TGATAATCTGTTTGATACTGCCTTG 57.442 36.000 0.00 0.00 34.45 3.61
82 85 8.757982 ATTGATAATCTGTTTGATACTGCCTT 57.242 30.769 0.00 0.00 34.45 4.35
83 86 7.446625 GGATTGATAATCTGTTTGATACTGCCT 59.553 37.037 2.03 0.00 38.01 4.75
84 87 7.446625 AGGATTGATAATCTGTTTGATACTGCC 59.553 37.037 2.03 0.00 38.01 4.85
85 88 8.388484 AGGATTGATAATCTGTTTGATACTGC 57.612 34.615 2.03 0.00 38.01 4.40
86 89 9.551734 TGAGGATTGATAATCTGTTTGATACTG 57.448 33.333 2.03 0.00 38.01 2.74
88 91 9.553064 ACTGAGGATTGATAATCTGTTTGATAC 57.447 33.333 2.03 0.00 38.01 2.24
89 92 9.551734 CACTGAGGATTGATAATCTGTTTGATA 57.448 33.333 2.03 0.00 38.01 2.15
90 93 7.013083 GCACTGAGGATTGATAATCTGTTTGAT 59.987 37.037 2.03 0.00 38.01 2.57
91 94 6.317140 GCACTGAGGATTGATAATCTGTTTGA 59.683 38.462 2.03 0.00 38.01 2.69
92 95 6.459298 GGCACTGAGGATTGATAATCTGTTTG 60.459 42.308 2.03 0.00 38.01 2.93
95 98 4.164796 TGGCACTGAGGATTGATAATCTGT 59.835 41.667 2.03 0.00 38.01 3.41
96 99 4.711399 TGGCACTGAGGATTGATAATCTG 58.289 43.478 2.03 0.00 38.01 2.90
97 100 5.378230 TTGGCACTGAGGATTGATAATCT 57.622 39.130 0.00 0.00 38.01 2.40
98 101 6.455360 TTTTGGCACTGAGGATTGATAATC 57.545 37.500 0.00 0.00 37.17 1.75
100 103 6.189859 AGATTTTGGCACTGAGGATTGATAA 58.810 36.000 0.00 0.00 0.00 1.75
101 104 5.759059 AGATTTTGGCACTGAGGATTGATA 58.241 37.500 0.00 0.00 0.00 2.15
102 105 4.607239 AGATTTTGGCACTGAGGATTGAT 58.393 39.130 0.00 0.00 0.00 2.57
104 107 4.461781 AGAAGATTTTGGCACTGAGGATTG 59.538 41.667 0.00 0.00 0.00 2.67
105 108 4.461781 CAGAAGATTTTGGCACTGAGGATT 59.538 41.667 0.00 0.00 0.00 3.01
106 109 4.015084 CAGAAGATTTTGGCACTGAGGAT 58.985 43.478 0.00 0.00 0.00 3.24
107 110 3.072915 TCAGAAGATTTTGGCACTGAGGA 59.927 43.478 0.00 0.00 32.04 3.71
108 111 3.415212 TCAGAAGATTTTGGCACTGAGG 58.585 45.455 0.00 0.00 32.04 3.86
109 112 5.640189 ATTCAGAAGATTTTGGCACTGAG 57.360 39.130 0.00 0.00 36.13 3.35
110 113 5.047802 GGAATTCAGAAGATTTTGGCACTGA 60.048 40.000 7.93 0.00 33.53 3.41
111 114 5.047519 AGGAATTCAGAAGATTTTGGCACTG 60.048 40.000 7.93 0.00 0.00 3.66
112 115 5.047519 CAGGAATTCAGAAGATTTTGGCACT 60.048 40.000 7.93 0.00 0.00 4.40
119 148 6.794534 ACCTTACCAGGAATTCAGAAGATTT 58.205 36.000 7.93 0.00 44.19 2.17
136 165 3.870274 ACCGCTTCATTTCTACCTTACC 58.130 45.455 0.00 0.00 0.00 2.85
154 266 3.135225 TGGAGTACACACATTTGAACCG 58.865 45.455 0.00 0.00 0.00 4.44
160 272 7.094205 GGAATTCATTCTGGAGTACACACATTT 60.094 37.037 7.93 0.00 37.00 2.32
164 276 4.330074 CGGAATTCATTCTGGAGTACACAC 59.670 45.833 7.93 0.00 39.05 3.82
174 286 5.874810 TGTTCTCCTAACGGAATTCATTCTG 59.125 40.000 7.93 6.79 46.18 3.02
179 291 4.322499 GGTCTGTTCTCCTAACGGAATTCA 60.322 45.833 7.93 0.00 39.29 2.57
182 294 2.165845 CGGTCTGTTCTCCTAACGGAAT 59.834 50.000 1.17 0.00 39.29 3.01
183 295 1.542915 CGGTCTGTTCTCCTAACGGAA 59.457 52.381 1.17 0.00 39.29 4.30
184 296 1.171308 CGGTCTGTTCTCCTAACGGA 58.829 55.000 0.00 0.00 37.82 4.69
185 297 0.886563 ACGGTCTGTTCTCCTAACGG 59.113 55.000 0.00 0.00 0.00 4.44
186 298 1.268899 ACACGGTCTGTTCTCCTAACG 59.731 52.381 0.00 0.00 0.00 3.18
188 300 4.084287 ACATACACGGTCTGTTCTCCTAA 58.916 43.478 0.00 0.00 33.91 2.69
190 302 2.526432 ACATACACGGTCTGTTCTCCT 58.474 47.619 0.00 0.00 33.91 3.69
191 303 4.097437 TGATACATACACGGTCTGTTCTCC 59.903 45.833 1.59 0.00 33.91 3.71
194 306 4.995124 ACTGATACATACACGGTCTGTTC 58.005 43.478 1.59 1.72 33.91 3.18
195 307 6.710597 ATACTGATACATACACGGTCTGTT 57.289 37.500 1.59 0.00 33.91 3.16
196 308 6.710597 AATACTGATACATACACGGTCTGT 57.289 37.500 0.00 0.00 36.82 3.41
197 309 8.420374 AAAAATACTGATACATACACGGTCTG 57.580 34.615 0.00 0.00 0.00 3.51
281 404 7.454260 AAATCTTTTGGAGATAACTGGTGAC 57.546 36.000 0.00 0.00 44.41 3.67
291 424 8.863086 TCAGACAATGAAAAATCTTTTGGAGAT 58.137 29.630 0.00 0.00 39.98 2.75
293 426 7.922278 TGTCAGACAATGAAAAATCTTTTGGAG 59.078 33.333 0.00 0.00 40.43 3.86
294 427 7.780064 TGTCAGACAATGAAAAATCTTTTGGA 58.220 30.769 0.00 0.00 40.43 3.53
295 428 8.330302 GTTGTCAGACAATGAAAAATCTTTTGG 58.670 33.333 19.04 0.00 40.59 3.28
307 440 6.017934 GCTGAACTTAAGTTGTCAGACAATGA 60.018 38.462 29.29 5.10 40.59 2.57
316 449 5.008613 TGGTTGATGCTGAACTTAAGTTGTC 59.991 40.000 25.17 12.54 38.56 3.18
390 524 2.796245 CTTTACCGTTGCGCCAAGGC 62.796 60.000 13.35 0.00 37.85 4.35
391 525 1.209127 CTTTACCGTTGCGCCAAGG 59.791 57.895 11.90 11.90 0.00 3.61
392 526 1.442017 GCTTTACCGTTGCGCCAAG 60.442 57.895 4.18 0.00 0.00 3.61
393 527 1.894756 AGCTTTACCGTTGCGCCAA 60.895 52.632 4.18 0.00 0.00 4.52
394 528 2.281208 AGCTTTACCGTTGCGCCA 60.281 55.556 4.18 0.00 0.00 5.69
395 529 2.125202 AACAGCTTTACCGTTGCGCC 62.125 55.000 4.18 0.00 0.00 6.53
396 530 0.996727 CAACAGCTTTACCGTTGCGC 60.997 55.000 0.00 0.00 34.21 6.09
397 531 3.071495 CAACAGCTTTACCGTTGCG 57.929 52.632 1.41 0.00 34.21 4.85
401 535 0.951558 CAAGGCAACAGCTTTACCGT 59.048 50.000 0.00 0.00 41.41 4.83
402 536 0.951558 ACAAGGCAACAGCTTTACCG 59.048 50.000 0.00 0.00 41.41 4.02
403 537 1.953686 TCACAAGGCAACAGCTTTACC 59.046 47.619 0.00 0.00 41.41 2.85
404 538 2.287608 GGTCACAAGGCAACAGCTTTAC 60.288 50.000 0.00 0.00 41.41 2.01
405 539 1.953686 GGTCACAAGGCAACAGCTTTA 59.046 47.619 0.00 0.00 41.41 1.85
406 540 0.746659 GGTCACAAGGCAACAGCTTT 59.253 50.000 0.00 0.00 41.41 3.51
407 541 0.395586 TGGTCACAAGGCAACAGCTT 60.396 50.000 0.00 0.00 41.41 3.74
408 542 0.178981 ATGGTCACAAGGCAACAGCT 60.179 50.000 0.00 0.00 41.41 4.24
409 543 0.242017 GATGGTCACAAGGCAACAGC 59.758 55.000 0.00 0.00 41.41 4.40
410 544 1.538512 CTGATGGTCACAAGGCAACAG 59.461 52.381 0.00 0.00 41.41 3.16
411 545 1.608055 CTGATGGTCACAAGGCAACA 58.392 50.000 0.00 0.00 41.41 3.33
412 546 0.883833 CCTGATGGTCACAAGGCAAC 59.116 55.000 0.00 0.00 0.00 4.17
413 547 0.478072 ACCTGATGGTCACAAGGCAA 59.522 50.000 0.00 0.00 44.78 4.52
414 548 2.154139 ACCTGATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
424 558 2.289072 ACTCAAACTCGTGACCTGATGG 60.289 50.000 0.00 0.00 39.83 3.51
425 559 3.032017 ACTCAAACTCGTGACCTGATG 57.968 47.619 0.00 0.00 0.00 3.07
426 560 3.322254 AGAACTCAAACTCGTGACCTGAT 59.678 43.478 0.00 0.00 0.00 2.90
427 561 2.693591 AGAACTCAAACTCGTGACCTGA 59.306 45.455 0.00 0.00 0.00 3.86
428 562 2.797156 CAGAACTCAAACTCGTGACCTG 59.203 50.000 0.00 0.00 0.00 4.00
429 563 2.224066 CCAGAACTCAAACTCGTGACCT 60.224 50.000 0.00 0.00 0.00 3.85
430 564 2.135933 CCAGAACTCAAACTCGTGACC 58.864 52.381 0.00 0.00 0.00 4.02
431 565 3.093717 TCCAGAACTCAAACTCGTGAC 57.906 47.619 0.00 0.00 0.00 3.67
432 566 3.717707 CTTCCAGAACTCAAACTCGTGA 58.282 45.455 0.00 0.00 0.00 4.35
433 567 2.221981 GCTTCCAGAACTCAAACTCGTG 59.778 50.000 0.00 0.00 0.00 4.35
434 568 2.158957 TGCTTCCAGAACTCAAACTCGT 60.159 45.455 0.00 0.00 0.00 4.18
435 569 2.478134 CTGCTTCCAGAACTCAAACTCG 59.522 50.000 0.00 0.00 41.77 4.18
436 570 2.225255 GCTGCTTCCAGAACTCAAACTC 59.775 50.000 0.00 0.00 41.77 3.01
437 571 2.225467 GCTGCTTCCAGAACTCAAACT 58.775 47.619 0.00 0.00 41.77 2.66
438 572 1.268079 GGCTGCTTCCAGAACTCAAAC 59.732 52.381 0.00 0.00 41.77 2.93
439 573 1.143684 AGGCTGCTTCCAGAACTCAAA 59.856 47.619 0.00 0.00 41.77 2.69
440 574 0.767375 AGGCTGCTTCCAGAACTCAA 59.233 50.000 0.00 0.00 41.77 3.02
441 575 0.322975 GAGGCTGCTTCCAGAACTCA 59.677 55.000 0.00 0.00 41.77 3.41
442 576 0.612744 AGAGGCTGCTTCCAGAACTC 59.387 55.000 8.26 0.00 41.77 3.01
443 577 1.944177 TAGAGGCTGCTTCCAGAACT 58.056 50.000 8.26 0.00 41.77 3.01
444 578 2.289694 TGTTAGAGGCTGCTTCCAGAAC 60.290 50.000 8.26 10.62 41.77 3.01
445 579 1.977854 TGTTAGAGGCTGCTTCCAGAA 59.022 47.619 8.26 0.00 41.77 3.02
446 580 1.552337 CTGTTAGAGGCTGCTTCCAGA 59.448 52.381 8.26 0.00 41.77 3.86
447 581 1.552337 TCTGTTAGAGGCTGCTTCCAG 59.448 52.381 8.26 8.84 42.13 3.86
448 582 1.644509 TCTGTTAGAGGCTGCTTCCA 58.355 50.000 8.26 0.00 0.00 3.53
449 583 2.770164 TTCTGTTAGAGGCTGCTTCC 57.230 50.000 8.26 0.00 0.00 3.46
450 584 4.006319 ACATTTCTGTTAGAGGCTGCTTC 58.994 43.478 3.22 3.22 28.70 3.86
451 585 4.026356 ACATTTCTGTTAGAGGCTGCTT 57.974 40.909 0.00 0.00 28.70 3.91
452 586 3.710209 ACATTTCTGTTAGAGGCTGCT 57.290 42.857 0.00 0.00 28.70 4.24
453 587 3.873952 CCTACATTTCTGTTAGAGGCTGC 59.126 47.826 0.00 0.00 36.79 5.25
454 588 4.162320 TCCCTACATTTCTGTTAGAGGCTG 59.838 45.833 0.00 0.00 36.79 4.85
455 589 4.362677 TCCCTACATTTCTGTTAGAGGCT 58.637 43.478 0.00 0.00 36.79 4.58
456 590 4.755266 TCCCTACATTTCTGTTAGAGGC 57.245 45.455 0.00 0.00 36.79 4.70
457 591 6.819146 GTCTTTCCCTACATTTCTGTTAGAGG 59.181 42.308 0.00 0.00 36.79 3.69
458 592 7.547370 CAGTCTTTCCCTACATTTCTGTTAGAG 59.453 40.741 0.00 0.00 36.79 2.43
459 593 7.386851 CAGTCTTTCCCTACATTTCTGTTAGA 58.613 38.462 0.00 0.00 36.79 2.10
460 594 6.092807 GCAGTCTTTCCCTACATTTCTGTTAG 59.907 42.308 0.00 0.00 36.79 2.34
461 595 5.938125 GCAGTCTTTCCCTACATTTCTGTTA 59.062 40.000 0.00 0.00 36.79 2.41
462 596 4.762251 GCAGTCTTTCCCTACATTTCTGTT 59.238 41.667 0.00 0.00 36.79 3.16
463 597 4.327680 GCAGTCTTTCCCTACATTTCTGT 58.672 43.478 0.00 0.00 39.49 3.41
464 598 3.691609 GGCAGTCTTTCCCTACATTTCTG 59.308 47.826 0.00 0.00 0.00 3.02
465 599 3.589288 AGGCAGTCTTTCCCTACATTTCT 59.411 43.478 0.00 0.00 0.00 2.52
466 600 3.956744 AGGCAGTCTTTCCCTACATTTC 58.043 45.455 0.00 0.00 0.00 2.17
467 601 4.844884 GTAGGCAGTCTTTCCCTACATTT 58.155 43.478 10.34 0.00 46.57 2.32
468 602 4.489306 GTAGGCAGTCTTTCCCTACATT 57.511 45.455 10.34 0.00 46.57 2.71
472 606 6.526056 TCTATAGTAGGCAGTCTTTCCCTA 57.474 41.667 0.00 0.00 0.00 3.53
473 607 5.405063 TCTATAGTAGGCAGTCTTTCCCT 57.595 43.478 0.00 0.00 0.00 4.20
474 608 5.186215 GGATCTATAGTAGGCAGTCTTTCCC 59.814 48.000 0.00 0.00 0.00 3.97
475 609 5.775701 TGGATCTATAGTAGGCAGTCTTTCC 59.224 44.000 0.00 0.00 0.00 3.13
476 610 6.902771 TGGATCTATAGTAGGCAGTCTTTC 57.097 41.667 0.00 0.00 0.00 2.62
477 611 7.345914 ACTTTGGATCTATAGTAGGCAGTCTTT 59.654 37.037 0.30 0.00 0.00 2.52
478 612 6.841755 ACTTTGGATCTATAGTAGGCAGTCTT 59.158 38.462 0.30 0.00 0.00 3.01
479 613 6.266558 CACTTTGGATCTATAGTAGGCAGTCT 59.733 42.308 1.99 0.00 0.00 3.24
480 614 6.451393 CACTTTGGATCTATAGTAGGCAGTC 58.549 44.000 1.99 0.00 0.00 3.51
481 615 5.305644 CCACTTTGGATCTATAGTAGGCAGT 59.694 44.000 1.99 0.00 40.96 4.40
482 616 5.305644 ACCACTTTGGATCTATAGTAGGCAG 59.694 44.000 13.49 0.22 40.96 4.85
483 617 5.216622 ACCACTTTGGATCTATAGTAGGCA 58.783 41.667 13.49 0.00 40.96 4.75
484 618 5.810080 ACCACTTTGGATCTATAGTAGGC 57.190 43.478 13.49 0.00 40.96 3.93
485 619 8.578151 GTCTAACCACTTTGGATCTATAGTAGG 58.422 40.741 1.99 8.56 40.96 3.18
486 620 8.578151 GGTCTAACCACTTTGGATCTATAGTAG 58.422 40.741 1.99 0.00 40.96 2.57
487 621 7.508296 GGGTCTAACCACTTTGGATCTATAGTA 59.492 40.741 1.99 0.00 40.96 1.82
488 622 6.326843 GGGTCTAACCACTTTGGATCTATAGT 59.673 42.308 0.00 0.00 40.96 2.12
489 623 6.555360 AGGGTCTAACCACTTTGGATCTATAG 59.445 42.308 0.00 0.00 40.96 1.31
490 624 6.449956 AGGGTCTAACCACTTTGGATCTATA 58.550 40.000 0.00 0.00 40.96 1.31
491 625 5.289510 AGGGTCTAACCACTTTGGATCTAT 58.710 41.667 0.00 0.00 40.96 1.98
492 626 4.695606 AGGGTCTAACCACTTTGGATCTA 58.304 43.478 0.00 0.00 40.96 1.98
493 627 3.532102 AGGGTCTAACCACTTTGGATCT 58.468 45.455 0.00 0.00 40.96 2.75
494 628 4.302559 AAGGGTCTAACCACTTTGGATC 57.697 45.455 0.00 0.00 40.96 3.36
495 629 4.508584 GGAAAGGGTCTAACCACTTTGGAT 60.509 45.833 13.71 0.00 40.96 3.41
496 630 3.181437 GGAAAGGGTCTAACCACTTTGGA 60.181 47.826 13.71 0.00 40.96 3.53
497 631 3.154710 GGAAAGGGTCTAACCACTTTGG 58.845 50.000 13.71 0.00 41.02 3.28
498 632 3.821033 CAGGAAAGGGTCTAACCACTTTG 59.179 47.826 13.71 2.37 41.02 2.77
499 633 3.181433 CCAGGAAAGGGTCTAACCACTTT 60.181 47.826 10.46 10.46 41.02 2.66
500 634 2.375509 CCAGGAAAGGGTCTAACCACTT 59.624 50.000 0.00 0.00 41.02 3.16
501 635 1.985895 CCAGGAAAGGGTCTAACCACT 59.014 52.381 0.00 0.00 41.02 4.00
502 636 1.982958 TCCAGGAAAGGGTCTAACCAC 59.017 52.381 0.00 0.00 41.02 4.16
503 637 1.982958 GTCCAGGAAAGGGTCTAACCA 59.017 52.381 0.00 0.00 41.02 3.67
504 638 1.281287 GGTCCAGGAAAGGGTCTAACC 59.719 57.143 0.00 0.00 37.60 2.85
505 639 1.281287 GGGTCCAGGAAAGGGTCTAAC 59.719 57.143 0.00 0.00 0.00 2.34
506 640 1.153565 AGGGTCCAGGAAAGGGTCTAA 59.846 52.381 0.00 0.00 0.00 2.10
507 641 0.797579 AGGGTCCAGGAAAGGGTCTA 59.202 55.000 0.00 0.00 0.00 2.59
508 642 0.842467 CAGGGTCCAGGAAAGGGTCT 60.842 60.000 0.00 0.00 0.00 3.85
509 643 1.685820 CAGGGTCCAGGAAAGGGTC 59.314 63.158 0.00 0.00 0.00 4.46
510 644 2.539081 GCAGGGTCCAGGAAAGGGT 61.539 63.158 0.00 0.00 0.00 4.34
511 645 2.356667 GCAGGGTCCAGGAAAGGG 59.643 66.667 0.00 0.00 0.00 3.95
512 646 2.045926 CGCAGGGTCCAGGAAAGG 60.046 66.667 0.00 0.00 0.00 3.11
513 647 2.747855 GCGCAGGGTCCAGGAAAG 60.748 66.667 0.30 0.00 0.00 2.62
514 648 2.424842 ATTGCGCAGGGTCCAGGAAA 62.425 55.000 11.31 0.00 0.00 3.13
515 649 1.558167 TATTGCGCAGGGTCCAGGAA 61.558 55.000 11.31 0.00 0.00 3.36
516 650 1.992834 TATTGCGCAGGGTCCAGGA 60.993 57.895 11.31 0.00 0.00 3.86
517 651 1.819632 GTATTGCGCAGGGTCCAGG 60.820 63.158 11.31 0.00 0.00 4.45
518 652 0.464373 ATGTATTGCGCAGGGTCCAG 60.464 55.000 11.31 0.00 0.00 3.86
519 653 0.833949 TATGTATTGCGCAGGGTCCA 59.166 50.000 11.31 4.96 0.00 4.02
520 654 1.226746 GTATGTATTGCGCAGGGTCC 58.773 55.000 11.31 0.00 0.00 4.46
521 655 1.948104 TGTATGTATTGCGCAGGGTC 58.052 50.000 11.31 3.56 0.00 4.46
522 656 2.411628 TTGTATGTATTGCGCAGGGT 57.588 45.000 11.31 3.50 0.00 4.34
523 657 2.421775 TGTTTGTATGTATTGCGCAGGG 59.578 45.455 11.31 0.00 0.00 4.45
524 658 3.373748 TCTGTTTGTATGTATTGCGCAGG 59.626 43.478 11.31 0.00 0.00 4.85
525 659 4.598406 TCTGTTTGTATGTATTGCGCAG 57.402 40.909 11.31 0.00 0.00 5.18
526 660 4.693095 TCTTCTGTTTGTATGTATTGCGCA 59.307 37.500 5.66 5.66 0.00 6.09
527 661 5.216566 TCTTCTGTTTGTATGTATTGCGC 57.783 39.130 0.00 0.00 0.00 6.09
528 662 6.742718 CCTTTCTTCTGTTTGTATGTATTGCG 59.257 38.462 0.00 0.00 0.00 4.85
529 663 7.816640 TCCTTTCTTCTGTTTGTATGTATTGC 58.183 34.615 0.00 0.00 0.00 3.56
530 664 9.219603 TCTCCTTTCTTCTGTTTGTATGTATTG 57.780 33.333 0.00 0.00 0.00 1.90
531 665 9.220767 GTCTCCTTTCTTCTGTTTGTATGTATT 57.779 33.333 0.00 0.00 0.00 1.89
532 666 7.824779 GGTCTCCTTTCTTCTGTTTGTATGTAT 59.175 37.037 0.00 0.00 0.00 2.29
533 667 7.159372 GGTCTCCTTTCTTCTGTTTGTATGTA 58.841 38.462 0.00 0.00 0.00 2.29
534 668 5.998363 GGTCTCCTTTCTTCTGTTTGTATGT 59.002 40.000 0.00 0.00 0.00 2.29
535 669 5.997746 TGGTCTCCTTTCTTCTGTTTGTATG 59.002 40.000 0.00 0.00 0.00 2.39
536 670 6.187727 TGGTCTCCTTTCTTCTGTTTGTAT 57.812 37.500 0.00 0.00 0.00 2.29
537 671 5.623956 TGGTCTCCTTTCTTCTGTTTGTA 57.376 39.130 0.00 0.00 0.00 2.41
538 672 4.503714 TGGTCTCCTTTCTTCTGTTTGT 57.496 40.909 0.00 0.00 0.00 2.83
539 673 6.211515 CAATTGGTCTCCTTTCTTCTGTTTG 58.788 40.000 0.00 0.00 0.00 2.93
540 674 5.221322 GCAATTGGTCTCCTTTCTTCTGTTT 60.221 40.000 7.72 0.00 0.00 2.83
541 675 4.279420 GCAATTGGTCTCCTTTCTTCTGTT 59.721 41.667 7.72 0.00 0.00 3.16
542 676 3.823304 GCAATTGGTCTCCTTTCTTCTGT 59.177 43.478 7.72 0.00 0.00 3.41
543 677 3.822735 TGCAATTGGTCTCCTTTCTTCTG 59.177 43.478 7.72 0.00 0.00 3.02
544 678 4.104383 TGCAATTGGTCTCCTTTCTTCT 57.896 40.909 7.72 0.00 0.00 2.85
545 679 5.397142 AATGCAATTGGTCTCCTTTCTTC 57.603 39.130 7.72 0.00 33.44 2.87
559 693 4.202182 GGCAGATACATGTCCAATGCAATT 60.202 41.667 20.18 0.00 36.63 2.32
560 694 3.319972 GGCAGATACATGTCCAATGCAAT 59.680 43.478 20.18 1.27 33.94 3.56
561 695 2.689471 GGCAGATACATGTCCAATGCAA 59.311 45.455 20.18 0.00 33.94 4.08
562 696 2.092267 AGGCAGATACATGTCCAATGCA 60.092 45.455 20.18 0.00 33.94 3.96
563 697 2.579873 AGGCAGATACATGTCCAATGC 58.420 47.619 0.00 9.10 0.00 3.56
564 698 4.400251 ACAAAGGCAGATACATGTCCAATG 59.600 41.667 0.00 3.04 0.00 2.82
565 699 4.603131 ACAAAGGCAGATACATGTCCAAT 58.397 39.130 0.00 0.00 0.00 3.16
566 700 4.032960 ACAAAGGCAGATACATGTCCAA 57.967 40.909 0.00 0.00 0.00 3.53
567 701 3.719268 ACAAAGGCAGATACATGTCCA 57.281 42.857 0.00 0.00 0.00 4.02
568 702 3.129287 CCAACAAAGGCAGATACATGTCC 59.871 47.826 0.00 0.00 0.00 4.02
569 703 4.361451 CCAACAAAGGCAGATACATGTC 57.639 45.455 0.00 0.00 0.00 3.06
610 744 8.786826 TCTAGTTTTAAATGACCACCATACAG 57.213 34.615 0.00 0.00 34.45 2.74
614 748 7.775561 GGATCTCTAGTTTTAAATGACCACCAT 59.224 37.037 0.00 0.00 36.99 3.55
615 749 7.110155 GGATCTCTAGTTTTAAATGACCACCA 58.890 38.462 0.00 0.00 0.00 4.17
616 750 6.542735 GGGATCTCTAGTTTTAAATGACCACC 59.457 42.308 0.00 0.00 0.00 4.61
617 751 7.110155 TGGGATCTCTAGTTTTAAATGACCAC 58.890 38.462 0.00 0.00 0.00 4.16
618 752 7.265599 TGGGATCTCTAGTTTTAAATGACCA 57.734 36.000 0.00 0.00 0.00 4.02
619 753 8.624776 CATTGGGATCTCTAGTTTTAAATGACC 58.375 37.037 0.00 0.00 0.00 4.02
620 754 8.624776 CCATTGGGATCTCTAGTTTTAAATGAC 58.375 37.037 0.00 0.00 35.59 3.06
621 755 8.336235 ACCATTGGGATCTCTAGTTTTAAATGA 58.664 33.333 7.78 0.00 38.05 2.57
622 756 8.408601 CACCATTGGGATCTCTAGTTTTAAATG 58.591 37.037 7.78 0.00 38.05 2.32
623 757 7.068716 GCACCATTGGGATCTCTAGTTTTAAAT 59.931 37.037 7.78 0.00 38.05 1.40
624 758 6.377146 GCACCATTGGGATCTCTAGTTTTAAA 59.623 38.462 7.78 0.00 38.05 1.52
625 759 5.885912 GCACCATTGGGATCTCTAGTTTTAA 59.114 40.000 7.78 0.00 38.05 1.52
626 760 5.045213 TGCACCATTGGGATCTCTAGTTTTA 60.045 40.000 7.78 0.00 38.05 1.52
627 761 4.263905 TGCACCATTGGGATCTCTAGTTTT 60.264 41.667 7.78 0.00 38.05 2.43
628 762 3.266772 TGCACCATTGGGATCTCTAGTTT 59.733 43.478 7.78 0.00 38.05 2.66
629 763 2.846206 TGCACCATTGGGATCTCTAGTT 59.154 45.455 7.78 0.00 38.05 2.24
630 764 2.481441 TGCACCATTGGGATCTCTAGT 58.519 47.619 7.78 0.00 38.05 2.57
631 765 3.118112 AGTTGCACCATTGGGATCTCTAG 60.118 47.826 7.78 0.00 38.05 2.43
632 766 2.846206 AGTTGCACCATTGGGATCTCTA 59.154 45.455 7.78 0.00 38.05 2.43
633 767 1.637553 AGTTGCACCATTGGGATCTCT 59.362 47.619 7.78 0.00 38.05 3.10
634 768 2.019984 GAGTTGCACCATTGGGATCTC 58.980 52.381 7.78 4.17 38.05 2.75
635 769 1.341383 GGAGTTGCACCATTGGGATCT 60.341 52.381 7.78 0.00 38.05 2.75
636 770 1.106285 GGAGTTGCACCATTGGGATC 58.894 55.000 7.78 0.00 38.05 3.36
637 771 0.409092 TGGAGTTGCACCATTGGGAT 59.591 50.000 7.78 0.00 38.05 3.85
638 772 0.539438 GTGGAGTTGCACCATTGGGA 60.539 55.000 7.78 0.00 39.69 4.37
639 773 1.535204 GGTGGAGTTGCACCATTGGG 61.535 60.000 16.72 0.00 40.98 4.12
640 774 0.827089 TGGTGGAGTTGCACCATTGG 60.827 55.000 19.83 0.00 45.54 3.16
641 775 2.730990 TGGTGGAGTTGCACCATTG 58.269 52.632 19.83 0.00 45.54 2.82
645 779 1.111277 AAGTTTGGTGGAGTTGCACC 58.889 50.000 15.04 15.04 41.64 5.01
652 786 3.381272 TGAGCTTCAAAAGTTTGGTGGAG 59.619 43.478 4.04 0.00 38.66 3.86
658 792 8.080083 AGCAAATATTGAGCTTCAAAAGTTTG 57.920 30.769 9.25 17.40 40.12 2.93
659 793 8.667076 AAGCAAATATTGAGCTTCAAAAGTTT 57.333 26.923 17.89 0.00 44.67 2.66
677 811 6.238076 CGGCTAAAACTTTTGTCAAAGCAAAT 60.238 34.615 0.00 0.00 43.03 2.32
685 819 4.344448 CGAAACGGCTAAAACTTTTGTCA 58.656 39.130 0.00 0.00 0.00 3.58
701 835 4.911610 GGATCATCATTTTATGGCGAAACG 59.088 41.667 0.00 0.00 0.00 3.60
711 845 6.997476 TCAATCATCACGGGATCATCATTTTA 59.003 34.615 0.00 0.00 0.00 1.52
722 856 4.136796 GGAATTCATCAATCATCACGGGA 58.863 43.478 7.93 0.00 0.00 5.14
726 860 5.066375 TCGTTGGGAATTCATCAATCATCAC 59.934 40.000 7.93 0.00 0.00 3.06
727 861 5.192176 TCGTTGGGAATTCATCAATCATCA 58.808 37.500 7.93 0.00 0.00 3.07
729 863 5.049198 CGATCGTTGGGAATTCATCAATCAT 60.049 40.000 7.03 7.26 0.00 2.45
730 864 4.273235 CGATCGTTGGGAATTCATCAATCA 59.727 41.667 7.03 3.20 0.00 2.57
731 865 4.319766 CCGATCGTTGGGAATTCATCAATC 60.320 45.833 15.09 5.56 0.00 2.67
732 866 3.565482 CCGATCGTTGGGAATTCATCAAT 59.435 43.478 15.09 0.00 0.00 2.57
733 867 2.942376 CCGATCGTTGGGAATTCATCAA 59.058 45.455 15.09 8.40 0.00 2.57
734 868 2.560504 CCGATCGTTGGGAATTCATCA 58.439 47.619 15.09 2.20 0.00 3.07
735 869 1.264288 GCCGATCGTTGGGAATTCATC 59.736 52.381 15.09 0.00 0.00 2.92
736 870 1.308998 GCCGATCGTTGGGAATTCAT 58.691 50.000 15.09 0.00 0.00 2.57
737 871 0.035915 TGCCGATCGTTGGGAATTCA 60.036 50.000 15.09 0.00 0.00 2.57
738 872 0.657840 CTGCCGATCGTTGGGAATTC 59.342 55.000 15.09 0.00 0.00 2.17
739 873 0.748005 CCTGCCGATCGTTGGGAATT 60.748 55.000 15.09 0.00 0.00 2.17
740 874 1.153168 CCTGCCGATCGTTGGGAAT 60.153 57.895 15.09 0.00 0.00 3.01
741 875 1.622607 ATCCTGCCGATCGTTGGGAA 61.623 55.000 15.09 3.84 0.00 3.97
754 888 3.044059 GCAGCACGGTTCATCCTGC 62.044 63.158 0.00 0.00 41.57 4.85
782 916 0.110823 CTTTTGTACACGACCAGCGC 60.111 55.000 0.00 0.00 46.04 5.92
819 953 0.645868 GTCAGTACTTTGATCGCGGC 59.354 55.000 6.13 0.00 0.00 6.53
831 965 4.157120 ATGGCGGCGGGTCAGTAC 62.157 66.667 9.78 0.00 30.81 2.73
851 985 2.279120 GTCGGCGAGCCATCTCAG 60.279 66.667 11.20 0.00 39.30 3.35
888 1052 2.804527 TGCTTCTGATATGCGATTGCTC 59.195 45.455 6.47 0.00 43.34 4.26
904 1068 3.352222 AGTGCGTGCTGCTGCTTC 61.352 61.111 17.00 8.86 46.63 3.86
908 1072 2.479198 CATCAGTGCGTGCTGCTG 59.521 61.111 0.00 9.56 46.63 4.41
909 1073 3.429141 GCATCAGTGCGTGCTGCT 61.429 61.111 11.62 0.00 43.67 4.24
927 1091 2.738521 GACTGCCGCGTCATGTGT 60.739 61.111 4.92 0.00 34.11 3.72
959 1123 2.100603 GAGCTCGGAGTCGGTTCG 59.899 66.667 6.90 0.00 36.95 3.95
960 1124 1.137825 CTGAGCTCGGAGTCGGTTC 59.862 63.158 18.26 0.00 36.95 3.62
961 1125 2.995872 GCTGAGCTCGGAGTCGGTT 61.996 63.158 27.04 0.00 36.95 4.44
962 1126 3.444805 GCTGAGCTCGGAGTCGGT 61.445 66.667 27.04 0.00 36.95 4.69
1080 1263 3.260483 CGCATCTCGTGGAGCAGC 61.260 66.667 0.00 0.00 0.00 5.25
1726 1909 0.250513 AGAAGGCCGATGAAGGTCAC 59.749 55.000 0.00 0.00 38.64 3.67
1728 1911 0.827368 AGAGAAGGCCGATGAAGGTC 59.173 55.000 0.00 0.00 35.78 3.85
1995 2178 4.227134 CTCCAGACCATCCCGGCG 62.227 72.222 0.00 0.00 39.03 6.46
1998 2181 2.765807 AGCCTCCAGACCATCCCG 60.766 66.667 0.00 0.00 0.00 5.14
2001 2184 1.439644 GTCGAGCCTCCAGACCATC 59.560 63.158 0.00 0.00 0.00 3.51
2205 2388 4.344474 CGGTAGATCTCGGCCGCC 62.344 72.222 23.51 13.35 37.69 6.13
2208 2391 1.660917 CTTCCGGTAGATCTCGGCC 59.339 63.158 16.13 8.92 45.31 6.13
2475 2658 2.743928 CAGTTGGCGTCCCTCAGC 60.744 66.667 0.00 0.00 0.00 4.26
2557 2740 1.324736 CGACTTGAAGCTTATCGGTGC 59.675 52.381 0.00 0.00 0.00 5.01
2593 2776 2.044555 CCACTGCTGTCCATGGCTG 61.045 63.158 6.96 7.72 0.00 4.85
2594 2777 2.353958 CCACTGCTGTCCATGGCT 59.646 61.111 6.96 0.00 0.00 4.75
2617 2800 2.360844 TGCAGGTGTCAACGAAAAAGA 58.639 42.857 0.00 0.00 0.00 2.52
2627 2810 3.314913 CACTGTAAACAATGCAGGTGTCA 59.685 43.478 6.30 0.83 45.15 3.58
2650 2833 1.884926 GGCTCTGATGTGGCTACGC 60.885 63.158 0.00 0.00 0.00 4.42
2651 2834 0.807667 GTGGCTCTGATGTGGCTACG 60.808 60.000 0.00 0.00 34.06 3.51
2652 2835 0.807667 CGTGGCTCTGATGTGGCTAC 60.808 60.000 0.00 0.00 34.82 3.58
2653 2836 1.517361 CGTGGCTCTGATGTGGCTA 59.483 57.895 0.00 0.00 34.06 3.93
2654 2837 2.267006 CGTGGCTCTGATGTGGCT 59.733 61.111 0.00 0.00 34.06 4.75
2655 2838 3.503363 GCGTGGCTCTGATGTGGC 61.503 66.667 0.00 0.00 0.00 5.01
2656 2839 2.821366 GGCGTGGCTCTGATGTGG 60.821 66.667 0.00 0.00 0.00 4.17
2657 2840 2.821366 GGGCGTGGCTCTGATGTG 60.821 66.667 0.00 0.00 0.00 3.21
2658 2841 4.101448 GGGGCGTGGCTCTGATGT 62.101 66.667 0.00 0.00 0.00 3.06
2672 2855 4.452733 GACGAGCTTGGTCCGGGG 62.453 72.222 0.00 0.00 0.00 5.73
2673 2856 4.796231 CGACGAGCTTGGTCCGGG 62.796 72.222 0.00 0.00 0.00 5.73
2684 2867 3.302555 TGTTTGTTACTGTAGCGACGAG 58.697 45.455 0.00 0.00 0.00 4.18
2685 2868 3.243168 ACTGTTTGTTACTGTAGCGACGA 60.243 43.478 0.00 0.00 37.18 4.20
2686 2869 3.047796 ACTGTTTGTTACTGTAGCGACG 58.952 45.455 0.00 0.00 37.18 5.12
2687 2870 5.218139 AGTACTGTTTGTTACTGTAGCGAC 58.782 41.667 0.00 0.00 40.48 5.19
2688 2871 5.443185 AGTACTGTTTGTTACTGTAGCGA 57.557 39.130 0.00 0.00 40.48 4.93
2689 2872 7.167968 TGTTTAGTACTGTTTGTTACTGTAGCG 59.832 37.037 5.39 0.00 40.48 4.26
2690 2873 8.356533 TGTTTAGTACTGTTTGTTACTGTAGC 57.643 34.615 5.39 0.00 40.48 3.58
2691 2874 9.525409 ACTGTTTAGTACTGTTTGTTACTGTAG 57.475 33.333 5.39 0.00 40.48 2.74
2692 2875 9.874205 AACTGTTTAGTACTGTTTGTTACTGTA 57.126 29.630 5.39 0.00 43.75 2.74
2693 2876 8.782339 AACTGTTTAGTACTGTTTGTTACTGT 57.218 30.769 5.39 1.14 43.75 3.55
2694 2877 9.095065 AGAACTGTTTAGTACTGTTTGTTACTG 57.905 33.333 5.39 0.59 45.46 2.74
2698 2881 9.095065 CAGTAGAACTGTTTAGTACTGTTTGTT 57.905 33.333 19.89 4.41 45.46 2.83
2699 2882 8.472413 TCAGTAGAACTGTTTAGTACTGTTTGT 58.528 33.333 23.50 0.00 46.03 2.83
2700 2883 8.867112 TCAGTAGAACTGTTTAGTACTGTTTG 57.133 34.615 23.50 10.76 46.03 2.93
2701 2884 9.530633 CTTCAGTAGAACTGTTTAGTACTGTTT 57.469 33.333 23.50 0.00 46.03 2.83
2702 2885 7.652507 GCTTCAGTAGAACTGTTTAGTACTGTT 59.347 37.037 23.50 0.00 46.03 3.16
2703 2886 7.146648 GCTTCAGTAGAACTGTTTAGTACTGT 58.853 38.462 23.50 0.00 46.03 3.55
2704 2887 7.145985 TGCTTCAGTAGAACTGTTTAGTACTG 58.854 38.462 21.05 21.05 46.03 2.74
2705 2888 7.286215 TGCTTCAGTAGAACTGTTTAGTACT 57.714 36.000 0.00 0.00 46.03 2.73
2706 2889 7.813148 TGATGCTTCAGTAGAACTGTTTAGTAC 59.187 37.037 6.93 0.00 46.03 2.73
2707 2890 7.892609 TGATGCTTCAGTAGAACTGTTTAGTA 58.107 34.615 6.93 4.17 46.03 1.82
2708 2891 6.759272 TGATGCTTCAGTAGAACTGTTTAGT 58.241 36.000 6.93 0.00 46.03 2.24
2709 2892 7.623089 GCTTGATGCTTCAGTAGAACTGTTTAG 60.623 40.741 6.93 5.07 41.77 1.85
2710 2893 6.147821 GCTTGATGCTTCAGTAGAACTGTTTA 59.852 38.462 6.93 0.00 41.77 2.01
2711 2894 5.049129 GCTTGATGCTTCAGTAGAACTGTTT 60.049 40.000 6.93 0.00 41.77 2.83
2712 2895 4.453819 GCTTGATGCTTCAGTAGAACTGTT 59.546 41.667 6.93 0.00 41.77 3.16
2713 2896 3.999663 GCTTGATGCTTCAGTAGAACTGT 59.000 43.478 6.93 0.00 41.77 3.55
2714 2897 4.596801 GCTTGATGCTTCAGTAGAACTG 57.403 45.455 2.23 0.50 42.12 3.16
2727 2910 0.737219 CCAGGTTAGCAGCTTGATGC 59.263 55.000 0.00 2.33 46.88 3.91
2728 2911 1.386533 CCCAGGTTAGCAGCTTGATG 58.613 55.000 0.00 0.00 0.00 3.07
2729 2912 0.257039 CCCCAGGTTAGCAGCTTGAT 59.743 55.000 0.00 0.00 0.00 2.57
2730 2913 1.685224 CCCCAGGTTAGCAGCTTGA 59.315 57.895 0.00 0.00 0.00 3.02
2731 2914 2.048603 GCCCCAGGTTAGCAGCTTG 61.049 63.158 0.00 0.00 0.00 4.01
2732 2915 2.356667 GCCCCAGGTTAGCAGCTT 59.643 61.111 0.00 0.00 0.00 3.74
2733 2916 2.840203 TAGGCCCCAGGTTAGCAGCT 62.840 60.000 0.00 0.00 0.00 4.24
2734 2917 2.330924 CTAGGCCCCAGGTTAGCAGC 62.331 65.000 0.00 0.00 0.00 5.25
2735 2918 1.832912 CTAGGCCCCAGGTTAGCAG 59.167 63.158 0.00 0.00 0.00 4.24
2736 2919 2.375345 GCTAGGCCCCAGGTTAGCA 61.375 63.158 13.11 0.00 37.67 3.49
2737 2920 0.763223 TAGCTAGGCCCCAGGTTAGC 60.763 60.000 11.55 11.09 37.86 3.09
2738 2921 1.049402 GTAGCTAGGCCCCAGGTTAG 58.951 60.000 11.55 1.24 0.00 2.34
2739 2922 0.757935 CGTAGCTAGGCCCCAGGTTA 60.758 60.000 11.55 0.00 0.00 2.85
2740 2923 2.064581 CGTAGCTAGGCCCCAGGTT 61.065 63.158 11.55 0.00 0.00 3.50
2741 2924 2.444140 CGTAGCTAGGCCCCAGGT 60.444 66.667 11.11 11.11 0.00 4.00
2754 2937 2.033550 AGACAATTCTCTAGCGGCGTAG 59.966 50.000 9.37 9.34 0.00 3.51
2755 2938 2.022195 AGACAATTCTCTAGCGGCGTA 58.978 47.619 9.37 0.00 0.00 4.42
2756 2939 0.818296 AGACAATTCTCTAGCGGCGT 59.182 50.000 9.37 0.00 0.00 5.68
2757 2940 1.482278 GAGACAATTCTCTAGCGGCG 58.518 55.000 0.51 0.51 44.54 6.46
2758 2941 1.202313 ACGAGACAATTCTCTAGCGGC 60.202 52.381 0.00 0.00 45.61 6.53
2759 2942 2.853731 ACGAGACAATTCTCTAGCGG 57.146 50.000 0.00 0.00 45.61 5.52
2760 2943 6.814076 ATTTAACGAGACAATTCTCTAGCG 57.186 37.500 0.00 0.00 45.61 4.26
2761 2944 8.111224 GTCAATTTAACGAGACAATTCTCTAGC 58.889 37.037 0.00 0.00 45.61 3.42
2762 2945 8.596380 GGTCAATTTAACGAGACAATTCTCTAG 58.404 37.037 0.00 0.00 45.61 2.43
2763 2946 7.548075 GGGTCAATTTAACGAGACAATTCTCTA 59.452 37.037 0.00 0.00 45.61 2.43
2764 2947 6.371825 GGGTCAATTTAACGAGACAATTCTCT 59.628 38.462 0.00 0.00 45.61 3.10
2765 2948 6.543736 GGGTCAATTTAACGAGACAATTCTC 58.456 40.000 0.00 0.00 44.50 2.87
2766 2949 5.121768 CGGGTCAATTTAACGAGACAATTCT 59.878 40.000 0.00 0.00 32.79 2.40
2767 2950 5.321516 CGGGTCAATTTAACGAGACAATTC 58.678 41.667 0.00 0.00 32.79 2.17
2768 2951 4.379082 GCGGGTCAATTTAACGAGACAATT 60.379 41.667 0.00 0.00 32.79 2.32
2769 2952 3.126343 GCGGGTCAATTTAACGAGACAAT 59.874 43.478 0.00 0.00 32.79 2.71
2770 2953 2.481185 GCGGGTCAATTTAACGAGACAA 59.519 45.455 0.00 0.00 32.79 3.18
2771 2954 2.070783 GCGGGTCAATTTAACGAGACA 58.929 47.619 0.00 0.00 32.79 3.41
2772 2955 1.060122 CGCGGGTCAATTTAACGAGAC 59.940 52.381 0.00 0.00 0.00 3.36
2773 2956 1.337074 ACGCGGGTCAATTTAACGAGA 60.337 47.619 12.47 0.00 0.00 4.04
2774 2957 1.073177 ACGCGGGTCAATTTAACGAG 58.927 50.000 12.47 0.00 0.00 4.18
2775 2958 2.360553 TACGCGGGTCAATTTAACGA 57.639 45.000 12.47 0.00 0.00 3.85
2776 2959 4.775440 TTATACGCGGGTCAATTTAACG 57.225 40.909 12.47 0.00 0.00 3.18
2777 2960 8.248117 AGATATTATACGCGGGTCAATTTAAC 57.752 34.615 12.47 3.64 0.00 2.01
2778 2961 8.714179 CAAGATATTATACGCGGGTCAATTTAA 58.286 33.333 12.47 1.75 0.00 1.52
2779 2962 7.874016 ACAAGATATTATACGCGGGTCAATTTA 59.126 33.333 12.47 0.00 0.00 1.40
2780 2963 6.708949 ACAAGATATTATACGCGGGTCAATTT 59.291 34.615 12.47 5.54 0.00 1.82
2781 2964 6.228258 ACAAGATATTATACGCGGGTCAATT 58.772 36.000 12.47 2.09 0.00 2.32
2782 2965 5.790593 ACAAGATATTATACGCGGGTCAAT 58.209 37.500 12.47 12.44 0.00 2.57
2783 2966 5.204409 ACAAGATATTATACGCGGGTCAA 57.796 39.130 12.47 5.15 0.00 3.18
2784 2967 4.859304 ACAAGATATTATACGCGGGTCA 57.141 40.909 12.47 0.00 0.00 4.02
2785 2968 7.823149 ATTAACAAGATATTATACGCGGGTC 57.177 36.000 12.47 0.00 0.00 4.46
2786 2969 7.490402 GCTATTAACAAGATATTATACGCGGGT 59.510 37.037 12.47 10.91 0.00 5.28
2787 2970 7.490079 TGCTATTAACAAGATATTATACGCGGG 59.510 37.037 12.47 0.00 0.00 6.13
2788 2971 8.402326 TGCTATTAACAAGATATTATACGCGG 57.598 34.615 12.47 0.00 0.00 6.46
2789 2972 9.835315 CATGCTATTAACAAGATATTATACGCG 57.165 33.333 3.53 3.53 0.00 6.01
2790 2973 9.638300 GCATGCTATTAACAAGATATTATACGC 57.362 33.333 11.37 0.00 0.00 4.42
2797 2980 9.254133 CGCTATAGCATGCTATTAACAAGATAT 57.746 33.333 37.80 18.54 42.21 1.63
2798 2981 8.251026 ACGCTATAGCATGCTATTAACAAGATA 58.749 33.333 37.80 19.74 42.21 1.98
2799 2982 7.063898 CACGCTATAGCATGCTATTAACAAGAT 59.936 37.037 37.80 19.69 42.21 2.40
2800 2983 6.366061 CACGCTATAGCATGCTATTAACAAGA 59.634 38.462 37.80 21.02 42.21 3.02
2801 2984 6.146184 ACACGCTATAGCATGCTATTAACAAG 59.854 38.462 37.80 29.26 37.83 3.16
2802 2985 5.989168 ACACGCTATAGCATGCTATTAACAA 59.011 36.000 37.80 22.29 37.83 2.83
2803 2986 5.538118 ACACGCTATAGCATGCTATTAACA 58.462 37.500 37.80 22.62 37.83 2.41
2804 2987 6.467723 AACACGCTATAGCATGCTATTAAC 57.532 37.500 37.80 26.57 37.83 2.01
2805 2988 9.863845 TTATAACACGCTATAGCATGCTATTAA 57.136 29.630 37.80 24.83 37.83 1.40
2806 2989 9.297586 GTTATAACACGCTATAGCATGCTATTA 57.702 33.333 37.80 25.13 37.83 0.98
2807 2990 7.817478 TGTTATAACACGCTATAGCATGCTATT 59.183 33.333 37.80 24.00 37.83 1.73
2808 2991 7.320399 TGTTATAACACGCTATAGCATGCTAT 58.680 34.615 35.68 35.68 37.83 2.97
2809 2992 6.683715 TGTTATAACACGCTATAGCATGCTA 58.316 36.000 28.72 28.72 37.83 3.49
2810 2993 5.538118 TGTTATAACACGCTATAGCATGCT 58.462 37.500 25.99 25.99 37.83 3.79
2811 2994 5.839262 TGTTATAACACGCTATAGCATGC 57.161 39.130 20.13 10.51 37.83 4.06
2824 3007 8.884726 TGAAAATATGCTTAGCGTGTTATAACA 58.115 29.630 14.35 14.35 36.38 2.41
2825 3008 9.370126 CTGAAAATATGCTTAGCGTGTTATAAC 57.630 33.333 9.46 8.75 29.26 1.89
2826 3009 8.556194 CCTGAAAATATGCTTAGCGTGTTATAA 58.444 33.333 9.46 0.00 29.26 0.98
2827 3010 7.172532 CCCTGAAAATATGCTTAGCGTGTTATA 59.827 37.037 9.46 0.00 29.26 0.98
2828 3011 6.017109 CCCTGAAAATATGCTTAGCGTGTTAT 60.017 38.462 9.46 0.00 29.26 1.89
2829 3012 5.295787 CCCTGAAAATATGCTTAGCGTGTTA 59.704 40.000 9.46 0.00 29.26 2.41
2830 3013 4.096382 CCCTGAAAATATGCTTAGCGTGTT 59.904 41.667 9.46 5.85 30.53 3.32
2831 3014 3.627577 CCCTGAAAATATGCTTAGCGTGT 59.372 43.478 9.46 0.00 0.00 4.49
2832 3015 3.003689 CCCCTGAAAATATGCTTAGCGTG 59.996 47.826 9.46 0.00 0.00 5.34
2833 3016 3.214328 CCCCTGAAAATATGCTTAGCGT 58.786 45.455 3.82 3.82 0.00 5.07
2834 3017 2.030805 GCCCCTGAAAATATGCTTAGCG 60.031 50.000 0.00 0.00 0.00 4.26
2835 3018 2.030805 CGCCCCTGAAAATATGCTTAGC 60.031 50.000 0.00 0.00 0.00 3.09
2836 3019 2.554032 CCGCCCCTGAAAATATGCTTAG 59.446 50.000 0.00 0.00 0.00 2.18
2837 3020 2.582052 CCGCCCCTGAAAATATGCTTA 58.418 47.619 0.00 0.00 0.00 3.09
2838 3021 1.402787 CCGCCCCTGAAAATATGCTT 58.597 50.000 0.00 0.00 0.00 3.91
2839 3022 1.109323 GCCGCCCCTGAAAATATGCT 61.109 55.000 0.00 0.00 0.00 3.79
2840 3023 1.363807 GCCGCCCCTGAAAATATGC 59.636 57.895 0.00 0.00 0.00 3.14
2841 3024 1.101049 ACGCCGCCCCTGAAAATATG 61.101 55.000 0.00 0.00 0.00 1.78
2842 3025 0.395173 AACGCCGCCCCTGAAAATAT 60.395 50.000 0.00 0.00 0.00 1.28
2843 3026 0.252479 TAACGCCGCCCCTGAAAATA 59.748 50.000 0.00 0.00 0.00 1.40
2844 3027 0.395173 ATAACGCCGCCCCTGAAAAT 60.395 50.000 0.00 0.00 0.00 1.82
2845 3028 0.609681 AATAACGCCGCCCCTGAAAA 60.610 50.000 0.00 0.00 0.00 2.29
2846 3029 0.609681 AAATAACGCCGCCCCTGAAA 60.610 50.000 0.00 0.00 0.00 2.69
2847 3030 0.609681 AAAATAACGCCGCCCCTGAA 60.610 50.000 0.00 0.00 0.00 3.02
2848 3031 1.001887 AAAATAACGCCGCCCCTGA 60.002 52.632 0.00 0.00 0.00 3.86
2849 3032 1.138671 CAAAATAACGCCGCCCCTG 59.861 57.895 0.00 0.00 0.00 4.45
2850 3033 0.035247 TACAAAATAACGCCGCCCCT 60.035 50.000 0.00 0.00 0.00 4.79
2851 3034 1.026584 ATACAAAATAACGCCGCCCC 58.973 50.000 0.00 0.00 0.00 5.80
2852 3035 2.350102 GCTATACAAAATAACGCCGCCC 60.350 50.000 0.00 0.00 0.00 6.13
2853 3036 2.660900 CGCTATACAAAATAACGCCGCC 60.661 50.000 0.00 0.00 0.00 6.13
2854 3037 2.033492 ACGCTATACAAAATAACGCCGC 60.033 45.455 0.00 0.00 0.00 6.53
2855 3038 3.000523 ACACGCTATACAAAATAACGCCG 59.999 43.478 0.00 0.00 0.00 6.46
2856 3039 4.525411 ACACGCTATACAAAATAACGCC 57.475 40.909 0.00 0.00 0.00 5.68
2857 3040 5.318349 ACAACACGCTATACAAAATAACGC 58.682 37.500 0.00 0.00 0.00 4.84
2858 3041 7.769719 AAACAACACGCTATACAAAATAACG 57.230 32.000 0.00 0.00 0.00 3.18
2882 3065 4.220821 TGGTGTGCTGTAAACAAGGAAAAA 59.779 37.500 0.00 0.00 0.00 1.94
2883 3066 3.764434 TGGTGTGCTGTAAACAAGGAAAA 59.236 39.130 0.00 0.00 0.00 2.29
2884 3067 3.129638 GTGGTGTGCTGTAAACAAGGAAA 59.870 43.478 0.00 0.00 0.00 3.13
2885 3068 2.685897 GTGGTGTGCTGTAAACAAGGAA 59.314 45.455 0.00 0.00 0.00 3.36
2886 3069 2.294074 GTGGTGTGCTGTAAACAAGGA 58.706 47.619 0.00 0.00 0.00 3.36
2887 3070 2.020720 TGTGGTGTGCTGTAAACAAGG 58.979 47.619 0.00 0.00 0.00 3.61
2888 3071 3.314913 TGATGTGGTGTGCTGTAAACAAG 59.685 43.478 0.00 0.00 0.00 3.16
2889 3072 3.066064 GTGATGTGGTGTGCTGTAAACAA 59.934 43.478 0.00 0.00 0.00 2.83
2890 3073 2.616376 GTGATGTGGTGTGCTGTAAACA 59.384 45.455 0.00 0.00 0.00 2.83
2891 3074 2.616376 TGTGATGTGGTGTGCTGTAAAC 59.384 45.455 0.00 0.00 0.00 2.01
2933 3129 3.424703 AGTTGCATGCTAAGTTCCATGT 58.575 40.909 20.33 0.00 40.63 3.21
2938 3134 6.846350 ACTTGATTAGTTGCATGCTAAGTTC 58.154 36.000 20.33 9.35 31.29 3.01
2980 3177 8.633561 ACCTATATTACGGTACAAAGGAAGTAC 58.366 37.037 10.39 0.00 40.78 2.73
2981 3178 8.766994 ACCTATATTACGGTACAAAGGAAGTA 57.233 34.615 10.39 0.00 0.00 2.24
2982 3179 7.562821 AGACCTATATTACGGTACAAAGGAAGT 59.437 37.037 10.39 0.00 32.62 3.01
2984 3181 7.781693 AGAGACCTATATTACGGTACAAAGGAA 59.218 37.037 10.39 0.00 32.62 3.36
2985 3182 7.230108 CAGAGACCTATATTACGGTACAAAGGA 59.770 40.741 10.39 0.00 32.62 3.36
2986 3183 7.368833 CAGAGACCTATATTACGGTACAAAGG 58.631 42.308 0.00 0.00 32.62 3.11
2987 3184 7.230108 TCCAGAGACCTATATTACGGTACAAAG 59.770 40.741 0.00 0.00 32.62 2.77
2990 3187 6.183361 ACTCCAGAGACCTATATTACGGTACA 60.183 42.308 0.70 0.00 32.62 2.90
2991 3188 6.237154 ACTCCAGAGACCTATATTACGGTAC 58.763 44.000 0.70 0.00 32.62 3.34
2992 3189 6.445451 ACTCCAGAGACCTATATTACGGTA 57.555 41.667 0.70 0.00 32.62 4.02
2994 3191 5.354792 GCTACTCCAGAGACCTATATTACGG 59.645 48.000 0.70 0.00 0.00 4.02
2998 3195 6.183361 ACTCAGCTACTCCAGAGACCTATATT 60.183 42.308 0.70 0.00 32.59 1.28
2999 3196 5.312178 ACTCAGCTACTCCAGAGACCTATAT 59.688 44.000 0.70 0.00 32.59 0.86
3001 3198 3.461831 ACTCAGCTACTCCAGAGACCTAT 59.538 47.826 0.70 0.00 32.59 2.57
3002 3199 2.847449 ACTCAGCTACTCCAGAGACCTA 59.153 50.000 0.70 0.00 32.59 3.08
3003 3200 1.638589 ACTCAGCTACTCCAGAGACCT 59.361 52.381 0.70 0.00 32.59 3.85
3004 3201 2.137810 ACTCAGCTACTCCAGAGACC 57.862 55.000 0.70 0.00 32.59 3.85
3005 3202 4.456535 TCATACTCAGCTACTCCAGAGAC 58.543 47.826 0.70 0.00 32.59 3.36
3007 3204 4.826733 ACATCATACTCAGCTACTCCAGAG 59.173 45.833 0.00 0.00 0.00 3.35
3009 3206 6.208402 ACATACATCATACTCAGCTACTCCAG 59.792 42.308 0.00 0.00 0.00 3.86
3010 3207 6.071320 ACATACATCATACTCAGCTACTCCA 58.929 40.000 0.00 0.00 0.00 3.86
3012 3209 8.735315 ACATACATACATCATACTCAGCTACTC 58.265 37.037 0.00 0.00 0.00 2.59
3013 3210 8.642935 ACATACATACATCATACTCAGCTACT 57.357 34.615 0.00 0.00 0.00 2.57
3024 3221 9.276791 AGGATGAAGGATACATACATACATCAT 57.723 33.333 0.00 0.00 41.41 2.45
3026 3223 8.976353 AGAGGATGAAGGATACATACATACATC 58.024 37.037 0.00 0.00 41.41 3.06
3027 3224 8.907829 AGAGGATGAAGGATACATACATACAT 57.092 34.615 0.00 0.00 41.41 2.29
3028 3225 8.588472 CAAGAGGATGAAGGATACATACATACA 58.412 37.037 0.00 0.00 41.41 2.29
3029 3226 7.547370 GCAAGAGGATGAAGGATACATACATAC 59.453 40.741 0.00 0.00 41.41 2.39
3030 3227 7.235399 TGCAAGAGGATGAAGGATACATACATA 59.765 37.037 0.00 0.00 41.41 2.29
3044 3251 1.899814 ACTACGGTTGCAAGAGGATGA 59.100 47.619 0.00 0.00 0.00 2.92
3072 3279 4.841813 TGCCTTAACGGAGATATATTCCCA 59.158 41.667 7.80 0.00 33.16 4.37
3088 3295 5.544650 GGTACTGTACTGTTCTTGCCTTAA 58.455 41.667 16.79 0.00 0.00 1.85
3200 3420 7.390440 TCTCTTTTATTTGATTGTGTCGACCAT 59.610 33.333 14.12 2.13 0.00 3.55
3254 3478 7.615582 TTGCTTCGATGAATTTACAATCTCT 57.384 32.000 1.89 0.00 0.00 3.10
3280 3504 2.811431 CAAAGTGAGCAACATCCGGTTA 59.189 45.455 0.00 0.00 37.72 2.85
3288 3512 5.112220 CTTGATAAGCAAAGTGAGCAACA 57.888 39.130 0.00 0.00 35.74 3.33
3343 3567 1.893137 CAGTATATAGTGGCTGCGGGA 59.107 52.381 9.41 0.00 0.00 5.14
3345 3569 1.714794 GCAGTATATAGTGGCTGCGG 58.285 55.000 17.40 0.00 43.60 5.69
3353 3577 3.269486 CGTGAGCGTGCAGTATATAGT 57.731 47.619 0.00 0.00 0.00 2.12
3389 3614 0.806102 CTTAGACGGTGCGTGGATGG 60.806 60.000 0.00 0.00 41.37 3.51
3426 3651 2.284625 GGGGAGGCCTTTTTGGGG 60.285 66.667 6.77 0.00 36.00 4.96
3430 3655 0.786435 ACATCTGGGGAGGCCTTTTT 59.214 50.000 6.77 0.00 0.00 1.94
3431 3656 0.786435 AACATCTGGGGAGGCCTTTT 59.214 50.000 6.77 0.00 0.00 2.27
3432 3657 0.786435 AAACATCTGGGGAGGCCTTT 59.214 50.000 6.77 0.00 0.00 3.11
3433 3658 0.786435 AAAACATCTGGGGAGGCCTT 59.214 50.000 6.77 0.00 0.00 4.35
3434 3659 0.786435 AAAAACATCTGGGGAGGCCT 59.214 50.000 3.86 3.86 0.00 5.19
3435 3660 3.381388 AAAAACATCTGGGGAGGCC 57.619 52.632 0.00 0.00 0.00 5.19
3452 3677 4.320928 CAGTGCCGGCGCGAAAAA 62.321 61.111 32.68 5.11 38.08 1.94
3457 3682 3.609214 ATTTTTCAGTGCCGGCGCG 62.609 57.895 32.68 26.09 38.08 6.86
3458 3683 1.801512 GATTTTTCAGTGCCGGCGC 60.802 57.895 32.51 32.51 0.00 6.53
3459 3684 1.511887 CGATTTTTCAGTGCCGGCG 60.512 57.895 23.90 7.87 0.00 6.46
3460 3685 0.454452 GTCGATTTTTCAGTGCCGGC 60.454 55.000 22.73 22.73 0.00 6.13
3461 3686 0.168128 GGTCGATTTTTCAGTGCCGG 59.832 55.000 0.00 0.00 0.00 6.13
3462 3687 0.168128 GGGTCGATTTTTCAGTGCCG 59.832 55.000 0.00 0.00 0.00 5.69
3463 3688 1.200020 CTGGGTCGATTTTTCAGTGCC 59.800 52.381 0.00 0.00 0.00 5.01
3464 3689 1.880027 ACTGGGTCGATTTTTCAGTGC 59.120 47.619 0.00 0.00 37.31 4.40
3465 3690 3.813529 GACTGGGTCGATTTTTCAGTG 57.186 47.619 11.67 0.00 38.60 3.66
3483 3708 4.593864 GATCTCCTGGGGCGCGAC 62.594 72.222 12.10 6.99 0.00 5.19
3486 3711 2.666596 AAATCGATCTCCTGGGGCGC 62.667 60.000 0.00 0.00 0.00 6.53
3487 3712 0.179045 AAAATCGATCTCCTGGGGCG 60.179 55.000 0.00 0.00 0.00 6.13
3488 3713 1.598882 GAAAATCGATCTCCTGGGGC 58.401 55.000 0.00 0.00 0.00 5.80
3489 3714 1.871080 CGAAAATCGATCTCCTGGGG 58.129 55.000 0.00 0.00 43.74 4.96
3490 3715 1.221414 GCGAAAATCGATCTCCTGGG 58.779 55.000 0.00 0.00 43.74 4.45
3491 3716 1.221414 GGCGAAAATCGATCTCCTGG 58.779 55.000 0.00 0.00 43.74 4.45
3492 3717 0.855349 CGGCGAAAATCGATCTCCTG 59.145 55.000 0.00 0.00 43.74 3.86
3493 3718 0.249489 CCGGCGAAAATCGATCTCCT 60.249 55.000 9.30 0.00 43.74 3.69
3494 3719 1.832411 GCCGGCGAAAATCGATCTCC 61.832 60.000 12.58 0.00 43.74 3.71
3495 3720 1.565106 GCCGGCGAAAATCGATCTC 59.435 57.895 12.58 0.00 43.74 2.75
3496 3721 1.887707 GGCCGGCGAAAATCGATCT 60.888 57.895 22.54 0.00 43.74 2.75
3497 3722 2.631984 GGCCGGCGAAAATCGATC 59.368 61.111 22.54 0.00 43.74 3.69
3498 3723 2.900337 GGGCCGGCGAAAATCGAT 60.900 61.111 22.54 0.00 43.74 3.59
3512 3737 3.592814 GCTAAATTCGGCCCGGGC 61.593 66.667 38.57 38.57 41.06 6.13
3513 3738 3.276846 CGCTAAATTCGGCCCGGG 61.277 66.667 19.09 19.09 0.00 5.73
3514 3739 3.949047 GCGCTAAATTCGGCCCGG 61.949 66.667 1.90 0.00 0.00 5.73
3515 3740 3.949047 GGCGCTAAATTCGGCCCG 61.949 66.667 7.64 0.00 45.13 6.13
3519 3744 4.293626 CGCCGGCGCTAAATTCGG 62.294 66.667 38.48 15.00 44.70 4.30
3520 3745 4.293626 CCGCCGGCGCTAAATTCG 62.294 66.667 42.39 22.74 38.24 3.34
3521 3746 2.893404 TCCGCCGGCGCTAAATTC 60.893 61.111 42.39 0.75 38.24 2.17
3522 3747 3.199891 GTCCGCCGGCGCTAAATT 61.200 61.111 42.39 0.00 38.24 1.82
3523 3748 4.460683 TGTCCGCCGGCGCTAAAT 62.461 61.111 42.39 0.00 38.24 1.40



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.