Multiple sequence alignment - TraesCS3A01G402800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G402800 chr3A 100.000 4811 0 0 1 4811 648181721 648186531 0.000000e+00 8885.0
1 TraesCS3A01G402800 chr3A 93.316 2648 133 22 2168 4808 136000607 135997997 0.000000e+00 3869.0
2 TraesCS3A01G402800 chr2B 92.356 2368 125 18 2458 4811 639526182 639523857 0.000000e+00 3319.0
3 TraesCS3A01G402800 chr2B 87.730 1304 125 18 2941 4226 253785688 253786974 0.000000e+00 1489.0
4 TraesCS3A01G402800 chr2B 92.466 146 9 2 2943 3088 495883115 495883258 1.750000e-49 207.0
5 TraesCS3A01G402800 chr2B 87.407 135 17 0 1576 1710 796740102 796740236 6.450000e-34 156.0
6 TraesCS3A01G402800 chr3D 93.313 1959 94 15 2458 4402 500881632 500879697 0.000000e+00 2857.0
7 TraesCS3A01G402800 chr3D 94.813 1099 51 4 3715 4811 500867138 500866044 0.000000e+00 1709.0
8 TraesCS3A01G402800 chr3D 87.099 1186 112 14 3061 4231 119074848 119073689 0.000000e+00 1304.0
9 TraesCS3A01G402800 chr3D 91.342 231 20 0 2652 2882 19368924 19368694 2.790000e-82 316.0
10 TraesCS3A01G402800 chr3D 94.388 196 9 2 4617 4811 443671028 443670834 2.810000e-77 300.0
11 TraesCS3A01G402800 chr3D 91.111 90 7 1 1945 2033 335215019 335215108 2.350000e-23 121.0
12 TraesCS3A01G402800 chr5B 94.951 1228 56 4 3589 4811 42947796 42949022 0.000000e+00 1919.0
13 TraesCS3A01G402800 chr5B 95.122 492 19 4 2168 2656 641792896 641793385 0.000000e+00 771.0
14 TraesCS3A01G402800 chr5B 91.441 222 19 0 51 272 630282890 630283111 6.050000e-79 305.0
15 TraesCS3A01G402800 chrUn 93.608 1189 64 4 3575 4759 303458487 303459667 0.000000e+00 1764.0
16 TraesCS3A01G402800 chrUn 95.346 752 35 0 4011 4762 359000902 359000151 0.000000e+00 1195.0
17 TraesCS3A01G402800 chrUn 95.080 752 37 0 4011 4762 300650001 300649250 0.000000e+00 1184.0
18 TraesCS3A01G402800 chrUn 95.963 644 26 0 4011 4654 380414864 380415507 0.000000e+00 1046.0
19 TraesCS3A01G402800 chr4B 93.514 1033 55 8 2168 3197 570893325 570894348 0.000000e+00 1526.0
20 TraesCS3A01G402800 chr4B 93.230 842 48 7 2168 3005 9940449 9939613 0.000000e+00 1230.0
21 TraesCS3A01G402800 chr4B 92.874 842 46 9 2168 3005 608061490 608062321 0.000000e+00 1210.0
22 TraesCS3A01G402800 chr4B 90.557 413 34 3 4399 4811 580698916 580698509 4.240000e-150 542.0
23 TraesCS3A01G402800 chr4B 90.164 122 11 1 3948 4069 69931449 69931569 1.790000e-34 158.0
24 TraesCS3A01G402800 chr6D 90.481 914 57 4 1005 1898 68023223 68024126 0.000000e+00 1179.0
25 TraesCS3A01G402800 chr6D 89.348 920 62 11 1005 1898 87264104 87263195 0.000000e+00 1123.0
26 TraesCS3A01G402800 chr6D 91.489 705 52 4 284 983 467038937 467039638 0.000000e+00 963.0
27 TraesCS3A01G402800 chr2D 87.574 1014 91 17 2941 3934 24901840 24900842 0.000000e+00 1142.0
28 TraesCS3A01G402800 chr1B 90.000 830 54 5 1089 1898 14939504 14940324 0.000000e+00 1046.0
29 TraesCS3A01G402800 chr1B 94.919 492 20 4 2168 2656 84961795 84962284 0.000000e+00 765.0
30 TraesCS3A01G402800 chr1B 94.608 204 11 0 3071 3274 374011743 374011540 2.790000e-82 316.0
31 TraesCS3A01G402800 chr1B 90.071 141 14 0 982 1122 113820469 113820609 2.960000e-42 183.0
32 TraesCS3A01G402800 chr6A 91.528 720 50 7 270 983 613334872 613335586 0.000000e+00 981.0
33 TraesCS3A01G402800 chr6A 85.057 435 44 11 986 1408 526026473 526026048 1.600000e-114 424.0
34 TraesCS3A01G402800 chr5D 87.104 853 84 16 2048 2883 555464740 555463897 0.000000e+00 942.0
35 TraesCS3A01G402800 chr5D 90.987 233 21 0 2652 2884 370302543 370302311 1.010000e-81 315.0
36 TraesCS3A01G402800 chr6B 94.919 492 20 4 2168 2656 116277166 116276677 0.000000e+00 765.0
37 TraesCS3A01G402800 chr6B 90.794 315 26 2 270 581 712243040 712243354 7.450000e-113 418.0
38 TraesCS3A01G402800 chr6B 88.599 307 26 4 683 983 712243352 712243655 9.840000e-97 364.0
39 TraesCS3A01G402800 chr6B 89.362 141 15 0 982 1122 544664580 544664720 1.380000e-40 178.0
40 TraesCS3A01G402800 chr3B 88.889 594 55 5 2048 2638 259400290 259400875 0.000000e+00 721.0
41 TraesCS3A01G402800 chr3B 83.486 327 46 6 1706 2031 167664655 167664974 1.010000e-76 298.0
42 TraesCS3A01G402800 chr4D 92.635 353 26 0 997 1349 301795489 301795841 4.300000e-140 508.0
43 TraesCS3A01G402800 chr4D 92.353 340 24 1 1343 1682 301804489 301804826 2.600000e-132 483.0
44 TraesCS3A01G402800 chr4D 90.419 167 13 1 1788 1954 301804831 301804994 2.920000e-52 217.0
45 TraesCS3A01G402800 chr4D 95.614 114 5 0 270 383 51865705 51865592 2.960000e-42 183.0
46 TraesCS3A01G402800 chr7B 89.773 264 17 4 3051 3311 397213498 397213242 3.590000e-86 329.0
47 TraesCS3A01G402800 chr7B 88.302 265 20 4 3051 3311 397281154 397280897 1.680000e-79 307.0
48 TraesCS3A01G402800 chr7B 96.154 52 2 0 3364 3415 397213222 397213171 8.580000e-13 86.1
49 TraesCS3A01G402800 chr7B 96.154 52 2 0 3364 3415 397280877 397280826 8.580000e-13 86.1
50 TraesCS3A01G402800 chr2A 90.000 90 8 1 1945 2033 448552885 448552796 1.090000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G402800 chr3A 648181721 648186531 4810 False 8885 8885 100.0000 1 4811 1 chr3A.!!$F1 4810
1 TraesCS3A01G402800 chr3A 135997997 136000607 2610 True 3869 3869 93.3160 2168 4808 1 chr3A.!!$R1 2640
2 TraesCS3A01G402800 chr2B 639523857 639526182 2325 True 3319 3319 92.3560 2458 4811 1 chr2B.!!$R1 2353
3 TraesCS3A01G402800 chr2B 253785688 253786974 1286 False 1489 1489 87.7300 2941 4226 1 chr2B.!!$F1 1285
4 TraesCS3A01G402800 chr3D 500879697 500881632 1935 True 2857 2857 93.3130 2458 4402 1 chr3D.!!$R5 1944
5 TraesCS3A01G402800 chr3D 500866044 500867138 1094 True 1709 1709 94.8130 3715 4811 1 chr3D.!!$R4 1096
6 TraesCS3A01G402800 chr3D 119073689 119074848 1159 True 1304 1304 87.0990 3061 4231 1 chr3D.!!$R2 1170
7 TraesCS3A01G402800 chr5B 42947796 42949022 1226 False 1919 1919 94.9510 3589 4811 1 chr5B.!!$F1 1222
8 TraesCS3A01G402800 chrUn 303458487 303459667 1180 False 1764 1764 93.6080 3575 4759 1 chrUn.!!$F1 1184
9 TraesCS3A01G402800 chrUn 359000151 359000902 751 True 1195 1195 95.3460 4011 4762 1 chrUn.!!$R2 751
10 TraesCS3A01G402800 chrUn 300649250 300650001 751 True 1184 1184 95.0800 4011 4762 1 chrUn.!!$R1 751
11 TraesCS3A01G402800 chrUn 380414864 380415507 643 False 1046 1046 95.9630 4011 4654 1 chrUn.!!$F2 643
12 TraesCS3A01G402800 chr4B 570893325 570894348 1023 False 1526 1526 93.5140 2168 3197 1 chr4B.!!$F2 1029
13 TraesCS3A01G402800 chr4B 9939613 9940449 836 True 1230 1230 93.2300 2168 3005 1 chr4B.!!$R1 837
14 TraesCS3A01G402800 chr4B 608061490 608062321 831 False 1210 1210 92.8740 2168 3005 1 chr4B.!!$F3 837
15 TraesCS3A01G402800 chr6D 68023223 68024126 903 False 1179 1179 90.4810 1005 1898 1 chr6D.!!$F1 893
16 TraesCS3A01G402800 chr6D 87263195 87264104 909 True 1123 1123 89.3480 1005 1898 1 chr6D.!!$R1 893
17 TraesCS3A01G402800 chr6D 467038937 467039638 701 False 963 963 91.4890 284 983 1 chr6D.!!$F2 699
18 TraesCS3A01G402800 chr2D 24900842 24901840 998 True 1142 1142 87.5740 2941 3934 1 chr2D.!!$R1 993
19 TraesCS3A01G402800 chr1B 14939504 14940324 820 False 1046 1046 90.0000 1089 1898 1 chr1B.!!$F1 809
20 TraesCS3A01G402800 chr6A 613334872 613335586 714 False 981 981 91.5280 270 983 1 chr6A.!!$F1 713
21 TraesCS3A01G402800 chr5D 555463897 555464740 843 True 942 942 87.1040 2048 2883 1 chr5D.!!$R2 835
22 TraesCS3A01G402800 chr6B 712243040 712243655 615 False 391 418 89.6965 270 983 2 chr6B.!!$F2 713
23 TraesCS3A01G402800 chr3B 259400290 259400875 585 False 721 721 88.8890 2048 2638 1 chr3B.!!$F2 590
24 TraesCS3A01G402800 chr4D 301804489 301804994 505 False 350 483 91.3860 1343 1954 2 chr4D.!!$F2 611

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
268 269 0.110295 AGCAGTGGTGTGCATTGGTA 59.890 50.0 0.00 0.0 46.60 3.25 F
907 913 0.178921 TCCTGGTTGGAGTCAGAGCT 60.179 55.0 0.00 0.0 40.56 4.09 F
990 1000 0.312729 TCGAAGTGTGACTAAGCGCA 59.687 50.0 11.47 0.0 0.00 6.09 F
1922 1958 0.611200 GGTTTGGTTGGGGGTATTGC 59.389 55.0 0.00 0.0 0.00 3.56 F
3339 3420 0.246635 CGTCGAGGTTCCAGGTTCAT 59.753 55.0 0.00 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2112 2148 0.610687 CTCCTCCTCACCCACAAGTC 59.389 60.000 0.00 0.0 0.0 3.01 R
2594 2632 0.537188 CCACCATCTAAGCACTCCGT 59.463 55.000 0.00 0.0 0.0 4.69 R
2679 2751 2.040813 AGTCTTGATGGTTCATGCTGGT 59.959 45.455 0.00 0.0 0.0 4.00 R
3452 3540 0.034574 TCGTAAACCAGGCCATGCAT 60.035 50.000 5.01 0.0 0.0 3.96 R
4355 4478 2.290008 ACCATCACAAGCACCATTACGA 60.290 45.455 0.00 0.0 0.0 3.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.689061 AGCACATTAAAATGAGATATTCTTGCA 58.311 29.630 9.60 0.00 39.67 4.08
27 28 9.304731 GCACATTAAAATGAGATATTCTTGCAA 57.695 29.630 9.60 0.00 39.67 4.08
43 44 7.655236 TTCTTGCAATTATGTTGATTTGTGG 57.345 32.000 0.00 0.00 0.00 4.17
44 45 6.757237 TCTTGCAATTATGTTGATTTGTGGT 58.243 32.000 0.00 0.00 0.00 4.16
45 46 6.645827 TCTTGCAATTATGTTGATTTGTGGTG 59.354 34.615 0.00 0.00 0.00 4.17
46 47 6.094193 TGCAATTATGTTGATTTGTGGTGA 57.906 33.333 0.00 0.00 0.00 4.02
47 48 6.157904 TGCAATTATGTTGATTTGTGGTGAG 58.842 36.000 0.00 0.00 0.00 3.51
48 49 6.015603 TGCAATTATGTTGATTTGTGGTGAGA 60.016 34.615 0.00 0.00 0.00 3.27
49 50 6.529125 GCAATTATGTTGATTTGTGGTGAGAG 59.471 38.462 0.00 0.00 0.00 3.20
50 51 7.575532 GCAATTATGTTGATTTGTGGTGAGAGA 60.576 37.037 0.00 0.00 0.00 3.10
51 52 8.298854 CAATTATGTTGATTTGTGGTGAGAGAA 58.701 33.333 0.00 0.00 0.00 2.87
52 53 5.695851 ATGTTGATTTGTGGTGAGAGAAC 57.304 39.130 0.00 0.00 0.00 3.01
53 54 3.882888 TGTTGATTTGTGGTGAGAGAACC 59.117 43.478 0.00 0.00 40.94 3.62
54 55 4.137543 GTTGATTTGTGGTGAGAGAACCT 58.862 43.478 0.00 0.00 41.16 3.50
55 56 5.163248 TGTTGATTTGTGGTGAGAGAACCTA 60.163 40.000 0.00 0.00 41.16 3.08
56 57 5.152623 TGATTTGTGGTGAGAGAACCTAG 57.847 43.478 0.00 0.00 41.16 3.02
57 58 4.838423 TGATTTGTGGTGAGAGAACCTAGA 59.162 41.667 0.00 0.00 41.16 2.43
58 59 4.873746 TTTGTGGTGAGAGAACCTAGAG 57.126 45.455 0.00 0.00 41.16 2.43
59 60 3.808834 TGTGGTGAGAGAACCTAGAGA 57.191 47.619 0.00 0.00 41.16 3.10
60 61 4.114015 TGTGGTGAGAGAACCTAGAGAA 57.886 45.455 0.00 0.00 41.16 2.87
61 62 4.678256 TGTGGTGAGAGAACCTAGAGAAT 58.322 43.478 0.00 0.00 41.16 2.40
62 63 5.087323 TGTGGTGAGAGAACCTAGAGAATT 58.913 41.667 0.00 0.00 41.16 2.17
63 64 6.253758 TGTGGTGAGAGAACCTAGAGAATTA 58.746 40.000 0.00 0.00 41.16 1.40
64 65 6.897966 TGTGGTGAGAGAACCTAGAGAATTAT 59.102 38.462 0.00 0.00 41.16 1.28
65 66 7.400339 TGTGGTGAGAGAACCTAGAGAATTATT 59.600 37.037 0.00 0.00 41.16 1.40
66 67 7.708752 GTGGTGAGAGAACCTAGAGAATTATTG 59.291 40.741 0.00 0.00 41.16 1.90
67 68 7.619698 TGGTGAGAGAACCTAGAGAATTATTGA 59.380 37.037 0.00 0.00 41.16 2.57
68 69 8.646900 GGTGAGAGAACCTAGAGAATTATTGAT 58.353 37.037 0.00 0.00 37.24 2.57
69 70 9.474920 GTGAGAGAACCTAGAGAATTATTGATG 57.525 37.037 0.00 0.00 0.00 3.07
70 71 9.206690 TGAGAGAACCTAGAGAATTATTGATGT 57.793 33.333 0.00 0.00 0.00 3.06
71 72 9.474920 GAGAGAACCTAGAGAATTATTGATGTG 57.525 37.037 0.00 0.00 0.00 3.21
72 73 8.986991 AGAGAACCTAGAGAATTATTGATGTGT 58.013 33.333 0.00 0.00 0.00 3.72
93 94 8.942338 TGTGTATATTCAGTTCATAGTTGTCC 57.058 34.615 0.00 0.00 0.00 4.02
94 95 8.758829 TGTGTATATTCAGTTCATAGTTGTCCT 58.241 33.333 0.00 0.00 0.00 3.85
95 96 9.035607 GTGTATATTCAGTTCATAGTTGTCCTG 57.964 37.037 0.00 0.00 0.00 3.86
96 97 8.758829 TGTATATTCAGTTCATAGTTGTCCTGT 58.241 33.333 0.00 0.00 0.00 4.00
97 98 9.601217 GTATATTCAGTTCATAGTTGTCCTGTT 57.399 33.333 0.00 0.00 0.00 3.16
101 102 8.918202 TTCAGTTCATAGTTGTCCTGTTTATT 57.082 30.769 0.00 0.00 0.00 1.40
103 104 9.431887 TCAGTTCATAGTTGTCCTGTTTATTAC 57.568 33.333 0.00 0.00 0.00 1.89
104 105 9.436957 CAGTTCATAGTTGTCCTGTTTATTACT 57.563 33.333 0.00 0.00 0.00 2.24
105 106 9.436957 AGTTCATAGTTGTCCTGTTTATTACTG 57.563 33.333 0.00 0.00 0.00 2.74
106 107 7.843490 TCATAGTTGTCCTGTTTATTACTGC 57.157 36.000 0.00 0.00 0.00 4.40
107 108 7.390823 TCATAGTTGTCCTGTTTATTACTGCA 58.609 34.615 0.00 0.00 0.00 4.41
108 109 7.880713 TCATAGTTGTCCTGTTTATTACTGCAA 59.119 33.333 0.00 0.00 0.00 4.08
109 110 6.952773 AGTTGTCCTGTTTATTACTGCAAA 57.047 33.333 0.00 0.00 0.00 3.68
110 111 6.735130 AGTTGTCCTGTTTATTACTGCAAAC 58.265 36.000 0.00 0.00 35.63 2.93
111 112 5.699097 TGTCCTGTTTATTACTGCAAACC 57.301 39.130 0.00 0.00 34.44 3.27
112 113 5.381757 TGTCCTGTTTATTACTGCAAACCT 58.618 37.500 0.00 0.00 34.44 3.50
113 114 5.240623 TGTCCTGTTTATTACTGCAAACCTG 59.759 40.000 0.00 0.00 34.44 4.00
114 115 5.472137 GTCCTGTTTATTACTGCAAACCTGA 59.528 40.000 0.00 0.00 34.44 3.86
115 116 6.016610 GTCCTGTTTATTACTGCAAACCTGAA 60.017 38.462 0.00 0.00 34.44 3.02
116 117 6.547880 TCCTGTTTATTACTGCAAACCTGAAA 59.452 34.615 0.00 0.00 34.44 2.69
117 118 6.863126 CCTGTTTATTACTGCAAACCTGAAAG 59.137 38.462 0.00 0.00 34.44 2.62
118 119 6.212955 TGTTTATTACTGCAAACCTGAAAGC 58.787 36.000 0.00 0.00 34.44 3.51
119 120 6.040391 TGTTTATTACTGCAAACCTGAAAGCT 59.960 34.615 0.00 0.00 34.44 3.74
120 121 7.229707 TGTTTATTACTGCAAACCTGAAAGCTA 59.770 33.333 0.00 0.00 34.44 3.32
121 122 7.938140 TTATTACTGCAAACCTGAAAGCTAT 57.062 32.000 0.00 0.00 0.00 2.97
122 123 9.456147 TTTATTACTGCAAACCTGAAAGCTATA 57.544 29.630 0.00 0.00 0.00 1.31
123 124 7.938140 ATTACTGCAAACCTGAAAGCTATAA 57.062 32.000 0.00 0.00 0.00 0.98
124 125 7.753309 TTACTGCAAACCTGAAAGCTATAAA 57.247 32.000 0.00 0.00 0.00 1.40
125 126 6.013842 ACTGCAAACCTGAAAGCTATAAAC 57.986 37.500 0.00 0.00 0.00 2.01
126 127 5.534654 ACTGCAAACCTGAAAGCTATAAACA 59.465 36.000 0.00 0.00 0.00 2.83
127 128 5.768317 TGCAAACCTGAAAGCTATAAACAC 58.232 37.500 0.00 0.00 0.00 3.32
128 129 5.300539 TGCAAACCTGAAAGCTATAAACACA 59.699 36.000 0.00 0.00 0.00 3.72
129 130 5.858581 GCAAACCTGAAAGCTATAAACACAG 59.141 40.000 0.00 0.00 0.00 3.66
130 131 6.381801 CAAACCTGAAAGCTATAAACACAGG 58.618 40.000 0.00 0.00 45.78 4.00
131 132 5.499004 ACCTGAAAGCTATAAACACAGGA 57.501 39.130 15.59 0.00 43.91 3.86
132 133 6.067217 ACCTGAAAGCTATAAACACAGGAT 57.933 37.500 15.59 0.00 43.91 3.24
133 134 5.882557 ACCTGAAAGCTATAAACACAGGATG 59.117 40.000 15.59 0.00 43.91 3.51
150 151 6.179504 CAGGATGTTCTTCTCACATGAAAG 57.820 41.667 0.00 0.00 34.89 2.62
151 152 5.704515 CAGGATGTTCTTCTCACATGAAAGT 59.295 40.000 0.00 0.00 34.89 2.66
152 153 6.875726 CAGGATGTTCTTCTCACATGAAAGTA 59.124 38.462 0.00 0.00 34.89 2.24
153 154 7.551974 CAGGATGTTCTTCTCACATGAAAGTAT 59.448 37.037 0.00 0.00 34.89 2.12
154 155 8.762645 AGGATGTTCTTCTCACATGAAAGTATA 58.237 33.333 0.00 0.00 34.89 1.47
155 156 9.039870 GGATGTTCTTCTCACATGAAAGTATAG 57.960 37.037 0.00 0.00 34.89 1.31
156 157 9.593134 GATGTTCTTCTCACATGAAAGTATAGT 57.407 33.333 0.00 0.00 34.89 2.12
157 158 9.950496 ATGTTCTTCTCACATGAAAGTATAGTT 57.050 29.630 0.00 0.00 33.42 2.24
158 159 9.778741 TGTTCTTCTCACATGAAAGTATAGTTT 57.221 29.630 5.20 5.20 0.00 2.66
161 162 9.862371 TCTTCTCACATGAAAGTATAGTTTCTC 57.138 33.333 25.98 9.14 37.34 2.87
162 163 9.868277 CTTCTCACATGAAAGTATAGTTTCTCT 57.132 33.333 25.98 15.02 37.34 3.10
191 192 8.641541 TGATTTATCTTAATTCCCATTTCTGGC 58.358 33.333 0.00 0.00 41.64 4.85
192 193 7.969690 TTTATCTTAATTCCCATTTCTGGCA 57.030 32.000 0.00 0.00 41.64 4.92
193 194 8.551682 TTTATCTTAATTCCCATTTCTGGCAT 57.448 30.769 0.00 0.00 41.64 4.40
194 195 9.653516 TTTATCTTAATTCCCATTTCTGGCATA 57.346 29.630 0.00 0.00 41.64 3.14
195 196 9.653516 TTATCTTAATTCCCATTTCTGGCATAA 57.346 29.630 0.00 0.00 41.64 1.90
196 197 7.969690 TCTTAATTCCCATTTCTGGCATAAA 57.030 32.000 0.24 0.24 41.64 1.40
197 198 7.781056 TCTTAATTCCCATTTCTGGCATAAAC 58.219 34.615 0.00 0.00 41.64 2.01
198 199 7.619302 TCTTAATTCCCATTTCTGGCATAAACT 59.381 33.333 0.00 0.00 41.64 2.66
199 200 8.830915 TTAATTCCCATTTCTGGCATAAACTA 57.169 30.769 0.00 0.00 41.64 2.24
200 201 7.732222 AATTCCCATTTCTGGCATAAACTAA 57.268 32.000 0.00 0.00 41.64 2.24
201 202 7.732222 ATTCCCATTTCTGGCATAAACTAAA 57.268 32.000 0.00 0.00 41.64 1.85
202 203 7.732222 TTCCCATTTCTGGCATAAACTAAAT 57.268 32.000 0.00 0.00 41.64 1.40
203 204 8.830915 TTCCCATTTCTGGCATAAACTAAATA 57.169 30.769 0.00 0.00 41.64 1.40
204 205 8.830915 TCCCATTTCTGGCATAAACTAAATAA 57.169 30.769 0.00 0.00 41.64 1.40
205 206 9.432982 TCCCATTTCTGGCATAAACTAAATAAT 57.567 29.630 0.00 0.00 41.64 1.28
254 255 9.613428 TGCTAATGTATTACTAAATCAAGCAGT 57.387 29.630 0.00 0.00 0.00 4.40
255 256 9.869844 GCTAATGTATTACTAAATCAAGCAGTG 57.130 33.333 0.00 0.00 0.00 3.66
257 258 8.807948 AATGTATTACTAAATCAAGCAGTGGT 57.192 30.769 0.00 0.00 0.00 4.16
258 259 7.609760 TGTATTACTAAATCAAGCAGTGGTG 57.390 36.000 0.00 0.00 0.00 4.17
259 260 7.165485 TGTATTACTAAATCAAGCAGTGGTGT 58.835 34.615 0.00 0.00 0.00 4.16
260 261 5.940192 TTACTAAATCAAGCAGTGGTGTG 57.060 39.130 0.00 0.00 0.00 3.82
261 262 2.554032 ACTAAATCAAGCAGTGGTGTGC 59.446 45.455 0.00 0.00 44.35 4.57
262 263 1.401761 AAATCAAGCAGTGGTGTGCA 58.598 45.000 0.00 0.00 46.60 4.57
263 264 1.624336 AATCAAGCAGTGGTGTGCAT 58.376 45.000 0.00 0.00 46.60 3.96
264 265 1.624336 ATCAAGCAGTGGTGTGCATT 58.376 45.000 0.00 0.00 46.60 3.56
265 266 0.669619 TCAAGCAGTGGTGTGCATTG 59.330 50.000 0.00 1.14 46.60 2.82
266 267 0.319211 CAAGCAGTGGTGTGCATTGG 60.319 55.000 0.00 0.00 46.60 3.16
267 268 0.756442 AAGCAGTGGTGTGCATTGGT 60.756 50.000 0.00 0.00 46.60 3.67
268 269 0.110295 AGCAGTGGTGTGCATTGGTA 59.890 50.000 0.00 0.00 46.60 3.25
326 327 6.830873 ATCTGCTCTTTCTAAAATGCACTT 57.169 33.333 0.00 0.00 0.00 3.16
377 380 6.913170 TGTTCTCTGCATCTTAAATGGTTTC 58.087 36.000 0.00 0.00 0.00 2.78
427 430 7.158697 TGCACTGACACTAAAGTACATATTGT 58.841 34.615 0.00 0.00 0.00 2.71
483 487 3.245122 GGTGGACCAGATAGGGTTTCAAA 60.245 47.826 0.00 0.00 42.53 2.69
485 489 5.016831 GTGGACCAGATAGGGTTTCAAAAT 58.983 41.667 0.00 0.00 42.53 1.82
487 491 6.661805 GTGGACCAGATAGGGTTTCAAAATTA 59.338 38.462 0.00 0.00 42.53 1.40
554 558 4.554134 CGATAATCAAATCTGTGCCTGCAG 60.554 45.833 6.78 6.78 37.81 4.41
584 588 2.167281 TGAACTCTACCTCTGCTCATGC 59.833 50.000 0.00 0.00 40.20 4.06
629 633 5.348724 CGTAGTTCACAATGCACTACAGAAT 59.651 40.000 15.71 0.00 43.87 2.40
647 651 6.746120 ACAGAATAGTCACGAACTTTACAGT 58.254 36.000 0.00 0.00 39.55 3.55
654 658 7.316544 AGTCACGAACTTTACAGTTTGAATT 57.683 32.000 14.65 0.00 44.63 2.17
722 728 2.046507 CCAGCCTGTCTGCCTGAC 60.047 66.667 0.00 0.00 45.54 3.51
756 762 4.620982 TCAAGCATCGTGTAGTCATATGG 58.379 43.478 2.13 0.00 0.00 2.74
759 765 2.547855 GCATCGTGTAGTCATATGGCCA 60.548 50.000 8.56 8.56 0.00 5.36
767 773 6.426633 CGTGTAGTCATATGGCCATTTATCAA 59.573 38.462 26.37 4.48 0.00 2.57
769 775 9.448438 GTGTAGTCATATGGCCATTTATCAATA 57.552 33.333 26.37 2.68 0.00 1.90
841 847 3.295973 TCACCGTCAGACATATCCATGA 58.704 45.455 0.41 0.00 35.96 3.07
850 856 7.389232 GTCAGACATATCCATGAATATCACCA 58.611 38.462 0.00 0.00 35.96 4.17
860 866 6.543465 TCCATGAATATCACCAAAGCTAACTG 59.457 38.462 0.00 0.00 0.00 3.16
862 868 7.067372 CCATGAATATCACCAAAGCTAACTGAA 59.933 37.037 0.00 0.00 0.00 3.02
864 870 8.402798 TGAATATCACCAAAGCTAACTGAAAA 57.597 30.769 0.00 0.00 0.00 2.29
881 887 0.601311 AAAGCTCGATATCCAGCCGC 60.601 55.000 17.47 3.93 36.17 6.53
894 900 0.392998 CAGCCGCTTACATTCCTGGT 60.393 55.000 0.00 0.00 0.00 4.00
907 913 0.178921 TCCTGGTTGGAGTCAGAGCT 60.179 55.000 0.00 0.00 40.56 4.09
908 914 1.077169 TCCTGGTTGGAGTCAGAGCTA 59.923 52.381 0.00 0.00 40.56 3.32
941 947 4.512944 CGCAGAAGCCAGTACATGATATTT 59.487 41.667 0.00 0.00 37.52 1.40
983 993 5.547465 TCCACAAAATATCGAAGTGTGACT 58.453 37.500 14.90 0.00 41.67 3.41
984 994 6.693466 TCCACAAAATATCGAAGTGTGACTA 58.307 36.000 14.90 2.85 41.67 2.59
985 995 7.156000 TCCACAAAATATCGAAGTGTGACTAA 58.844 34.615 14.90 1.15 41.67 2.24
986 996 7.330946 TCCACAAAATATCGAAGTGTGACTAAG 59.669 37.037 14.90 3.22 41.67 2.18
987 997 6.955963 CACAAAATATCGAAGTGTGACTAAGC 59.044 38.462 10.14 0.00 41.67 3.09
988 998 5.950965 AAATATCGAAGTGTGACTAAGCG 57.049 39.130 0.00 0.00 0.00 4.68
989 999 1.630148 ATCGAAGTGTGACTAAGCGC 58.370 50.000 0.00 0.00 0.00 5.92
990 1000 0.312729 TCGAAGTGTGACTAAGCGCA 59.687 50.000 11.47 0.00 0.00 6.09
991 1001 1.067846 TCGAAGTGTGACTAAGCGCAT 60.068 47.619 11.47 0.00 0.00 4.73
992 1002 1.059692 CGAAGTGTGACTAAGCGCATG 59.940 52.381 11.47 0.71 0.00 4.06
993 1003 2.337583 GAAGTGTGACTAAGCGCATGA 58.662 47.619 11.47 0.00 0.00 3.07
994 1004 2.455674 AGTGTGACTAAGCGCATGAA 57.544 45.000 11.47 0.00 0.00 2.57
995 1005 2.341257 AGTGTGACTAAGCGCATGAAG 58.659 47.619 11.47 3.23 0.00 3.02
996 1006 2.029020 AGTGTGACTAAGCGCATGAAGA 60.029 45.455 11.47 0.00 0.00 2.87
997 1007 2.932614 GTGTGACTAAGCGCATGAAGAT 59.067 45.455 11.47 0.00 0.00 2.40
998 1008 3.372206 GTGTGACTAAGCGCATGAAGATT 59.628 43.478 11.47 0.00 0.00 2.40
999 1009 4.566759 GTGTGACTAAGCGCATGAAGATTA 59.433 41.667 11.47 0.00 0.00 1.75
1000 1010 5.235186 GTGTGACTAAGCGCATGAAGATTAT 59.765 40.000 11.47 0.00 0.00 1.28
1001 1011 5.234972 TGTGACTAAGCGCATGAAGATTATG 59.765 40.000 11.47 0.00 0.00 1.90
1002 1012 4.212004 TGACTAAGCGCATGAAGATTATGC 59.788 41.667 11.47 0.00 45.64 3.14
1003 1013 3.499918 ACTAAGCGCATGAAGATTATGCC 59.500 43.478 11.47 0.00 46.20 4.40
1055 1065 2.836944 GGTAACTCGTGCAACCCTC 58.163 57.895 0.00 0.00 0.00 4.30
1056 1066 1.012486 GGTAACTCGTGCAACCCTCG 61.012 60.000 0.00 0.00 0.00 4.63
1067 1077 1.337447 GCAACCCTCGTGTTGTAGCTA 60.337 52.381 13.69 0.00 45.80 3.32
1100 1110 4.189231 ACATTGTCTTATAGCACCCGTTC 58.811 43.478 0.00 0.00 0.00 3.95
1138 1148 9.112725 CATGTGAATTACTCATATTCAGGAACA 57.887 33.333 0.00 0.00 41.31 3.18
1139 1149 9.685276 ATGTGAATTACTCATATTCAGGAACAA 57.315 29.630 0.00 0.00 41.31 2.83
1140 1150 9.166173 TGTGAATTACTCATATTCAGGAACAAG 57.834 33.333 0.00 0.00 41.31 3.16
1141 1151 8.125448 GTGAATTACTCATATTCAGGAACAAGC 58.875 37.037 0.00 0.00 41.31 4.01
1142 1152 8.049117 TGAATTACTCATATTCAGGAACAAGCT 58.951 33.333 0.00 0.00 37.15 3.74
1143 1153 7.798596 ATTACTCATATTCAGGAACAAGCTG 57.201 36.000 0.00 0.00 0.00 4.24
1144 1154 5.171339 ACTCATATTCAGGAACAAGCTGT 57.829 39.130 0.00 0.00 0.00 4.40
1145 1155 6.299805 ACTCATATTCAGGAACAAGCTGTA 57.700 37.500 0.00 0.00 0.00 2.74
1146 1156 6.344500 ACTCATATTCAGGAACAAGCTGTAG 58.656 40.000 0.00 0.00 0.00 2.74
1183 1193 3.011821 TCATAATAGAGATCCGCCTCCCT 59.988 47.826 0.00 0.00 33.76 4.20
1207 1217 7.010552 CCTGTGACGAGGAGTTCATTATTTAAG 59.989 40.741 0.00 0.00 34.69 1.85
1229 1239 3.034721 AGTTGTGCATGCCATTTTCAG 57.965 42.857 16.68 0.00 0.00 3.02
1367 1377 7.362315 CCAGTTCTATCATTTGTTCTGCAATGA 60.362 37.037 0.00 0.00 36.89 2.57
1453 1463 4.971125 GCGGTCGCAGCCCTATCC 62.971 72.222 10.67 0.00 41.49 2.59
1463 1473 2.829592 CCCTATCCGCACCCTTCC 59.170 66.667 0.00 0.00 0.00 3.46
1552 1562 4.635765 TGCATTTCTTCTCTATGTTTCCGG 59.364 41.667 0.00 0.00 0.00 5.14
1571 1581 7.956420 TTCCGGACATTGTATATATTGTGTC 57.044 36.000 1.83 12.36 36.22 3.67
1572 1582 7.297936 TCCGGACATTGTATATATTGTGTCT 57.702 36.000 0.00 0.00 36.94 3.41
1573 1583 7.732025 TCCGGACATTGTATATATTGTGTCTT 58.268 34.615 0.00 0.00 36.94 3.01
1645 1655 9.264144 TTTGTTCTTGCAAAAATAGGCAACTGC 62.264 37.037 0.00 0.00 44.41 4.40
1664 1674 4.937620 ACTGCGTATATGATTGGGCATAAG 59.062 41.667 0.00 0.00 34.67 1.73
1673 1683 4.651778 TGATTGGGCATAAGCTGTATACC 58.348 43.478 0.00 0.00 41.70 2.73
1676 1686 2.701423 TGGGCATAAGCTGTATACCGAA 59.299 45.455 0.00 0.00 41.70 4.30
1682 1692 5.236478 GCATAAGCTGTATACCGAACACATT 59.764 40.000 0.00 0.00 37.91 2.71
1695 1705 4.570772 CCGAACACATTGTATGACCCTTAG 59.429 45.833 0.00 0.00 0.00 2.18
1711 1721 8.956446 TGACCCTTAGTTATCTGATGATCATA 57.044 34.615 8.54 0.00 34.32 2.15
1712 1722 9.379770 TGACCCTTAGTTATCTGATGATCATAA 57.620 33.333 8.54 0.00 34.32 1.90
1870 1906 8.978472 TGGCTACAGTAAGTTCTATTTCTATGT 58.022 33.333 0.00 0.00 0.00 2.29
1887 1923 9.959721 ATTTCTATGTGTACTGGAGTAACATTT 57.040 29.630 14.38 2.74 35.70 2.32
1888 1924 9.787435 TTTCTATGTGTACTGGAGTAACATTTT 57.213 29.630 14.38 2.29 35.70 1.82
1910 1946 3.524095 TGATGGTCTTGATGGTTTGGT 57.476 42.857 0.00 0.00 0.00 3.67
1914 1950 1.618343 GGTCTTGATGGTTTGGTTGGG 59.382 52.381 0.00 0.00 0.00 4.12
1918 1954 1.158904 TGATGGTTTGGTTGGGGGTA 58.841 50.000 0.00 0.00 0.00 3.69
1922 1958 0.611200 GGTTTGGTTGGGGGTATTGC 59.389 55.000 0.00 0.00 0.00 3.56
1923 1959 1.639722 GTTTGGTTGGGGGTATTGCT 58.360 50.000 0.00 0.00 0.00 3.91
1924 1960 2.557901 GGTTTGGTTGGGGGTATTGCTA 60.558 50.000 0.00 0.00 0.00 3.49
1954 1990 4.080413 TGGCACTCATTGGATTATCTGTCA 60.080 41.667 0.00 0.00 0.00 3.58
1955 1991 4.274459 GGCACTCATTGGATTATCTGTCAC 59.726 45.833 0.00 0.00 0.00 3.67
1956 1992 5.121811 GCACTCATTGGATTATCTGTCACT 58.878 41.667 0.00 0.00 0.00 3.41
1957 1993 5.007430 GCACTCATTGGATTATCTGTCACTG 59.993 44.000 0.00 0.00 0.00 3.66
1958 1994 5.007430 CACTCATTGGATTATCTGTCACTGC 59.993 44.000 0.00 0.00 0.00 4.40
1959 1995 5.104610 ACTCATTGGATTATCTGTCACTGCT 60.105 40.000 0.00 0.00 0.00 4.24
1960 1996 5.363101 TCATTGGATTATCTGTCACTGCTC 58.637 41.667 0.00 0.00 0.00 4.26
1961 1997 5.129980 TCATTGGATTATCTGTCACTGCTCT 59.870 40.000 0.00 0.00 0.00 4.09
1962 1998 5.426689 TTGGATTATCTGTCACTGCTCTT 57.573 39.130 0.00 0.00 0.00 2.85
1963 1999 5.426689 TGGATTATCTGTCACTGCTCTTT 57.573 39.130 0.00 0.00 0.00 2.52
1964 2000 5.423015 TGGATTATCTGTCACTGCTCTTTC 58.577 41.667 0.00 0.00 0.00 2.62
1965 2001 4.505922 GGATTATCTGTCACTGCTCTTTCG 59.494 45.833 0.00 0.00 0.00 3.46
1966 2002 4.783764 TTATCTGTCACTGCTCTTTCGA 57.216 40.909 0.00 0.00 0.00 3.71
1967 2003 3.883830 ATCTGTCACTGCTCTTTCGAT 57.116 42.857 0.00 0.00 0.00 3.59
1968 2004 3.667497 TCTGTCACTGCTCTTTCGATT 57.333 42.857 0.00 0.00 0.00 3.34
1969 2005 3.995199 TCTGTCACTGCTCTTTCGATTT 58.005 40.909 0.00 0.00 0.00 2.17
1970 2006 3.742882 TCTGTCACTGCTCTTTCGATTTG 59.257 43.478 0.00 0.00 0.00 2.32
1971 2007 2.224079 TGTCACTGCTCTTTCGATTTGC 59.776 45.455 0.00 0.00 0.00 3.68
1972 2008 2.481952 GTCACTGCTCTTTCGATTTGCT 59.518 45.455 0.00 0.00 0.00 3.91
1973 2009 3.058639 GTCACTGCTCTTTCGATTTGCTT 60.059 43.478 0.00 0.00 0.00 3.91
1974 2010 3.058708 TCACTGCTCTTTCGATTTGCTTG 60.059 43.478 0.00 0.00 0.00 4.01
1975 2011 2.227388 ACTGCTCTTTCGATTTGCTTGG 59.773 45.455 0.00 0.00 0.00 3.61
1976 2012 1.541147 TGCTCTTTCGATTTGCTTGGG 59.459 47.619 0.00 0.00 0.00 4.12
1977 2013 1.541588 GCTCTTTCGATTTGCTTGGGT 59.458 47.619 0.00 0.00 0.00 4.51
1978 2014 2.747446 GCTCTTTCGATTTGCTTGGGTA 59.253 45.455 0.00 0.00 0.00 3.69
1979 2015 3.426292 GCTCTTTCGATTTGCTTGGGTAC 60.426 47.826 0.00 0.00 0.00 3.34
2011 2047 8.950208 ATTTCTGCCTACTATAGTGTTTTCTC 57.050 34.615 15.90 0.00 0.00 2.87
2012 2048 7.476540 TTCTGCCTACTATAGTGTTTTCTCA 57.523 36.000 15.90 3.34 0.00 3.27
2013 2049 7.476540 TCTGCCTACTATAGTGTTTTCTCAA 57.523 36.000 15.90 0.00 0.00 3.02
2014 2050 7.903145 TCTGCCTACTATAGTGTTTTCTCAAA 58.097 34.615 15.90 0.00 0.00 2.69
2015 2051 8.035394 TCTGCCTACTATAGTGTTTTCTCAAAG 58.965 37.037 15.90 0.63 0.00 2.77
2016 2052 7.676947 TGCCTACTATAGTGTTTTCTCAAAGT 58.323 34.615 15.90 0.00 0.00 2.66
2017 2053 8.154856 TGCCTACTATAGTGTTTTCTCAAAGTT 58.845 33.333 15.90 0.00 0.00 2.66
2018 2054 8.443937 GCCTACTATAGTGTTTTCTCAAAGTTG 58.556 37.037 15.90 0.00 0.00 3.16
2019 2055 9.490379 CCTACTATAGTGTTTTCTCAAAGTTGT 57.510 33.333 15.90 0.00 0.00 3.32
2025 2061 7.039313 AGTGTTTTCTCAAAGTTGTAATCCC 57.961 36.000 0.00 0.00 0.00 3.85
2026 2062 6.605594 AGTGTTTTCTCAAAGTTGTAATCCCA 59.394 34.615 0.00 0.00 0.00 4.37
2027 2063 6.695713 GTGTTTTCTCAAAGTTGTAATCCCAC 59.304 38.462 0.00 0.00 0.00 4.61
2028 2064 6.378564 TGTTTTCTCAAAGTTGTAATCCCACA 59.621 34.615 0.00 0.00 0.00 4.17
2029 2065 7.069331 TGTTTTCTCAAAGTTGTAATCCCACAT 59.931 33.333 0.00 0.00 0.00 3.21
2030 2066 6.817765 TTCTCAAAGTTGTAATCCCACATC 57.182 37.500 0.00 0.00 0.00 3.06
2031 2067 4.935205 TCTCAAAGTTGTAATCCCACATCG 59.065 41.667 0.00 0.00 0.00 3.84
2032 2068 4.647611 TCAAAGTTGTAATCCCACATCGT 58.352 39.130 0.00 0.00 0.00 3.73
2033 2069 5.067273 TCAAAGTTGTAATCCCACATCGTT 58.933 37.500 0.00 0.00 0.00 3.85
2034 2070 6.231951 TCAAAGTTGTAATCCCACATCGTTA 58.768 36.000 0.00 0.00 0.00 3.18
2035 2071 6.370442 TCAAAGTTGTAATCCCACATCGTTAG 59.630 38.462 0.00 0.00 0.00 2.34
2036 2072 4.189231 AGTTGTAATCCCACATCGTTAGC 58.811 43.478 0.00 0.00 0.00 3.09
2037 2073 3.897141 TGTAATCCCACATCGTTAGCA 57.103 42.857 0.00 0.00 0.00 3.49
2038 2074 4.415881 TGTAATCCCACATCGTTAGCAT 57.584 40.909 0.00 0.00 0.00 3.79
2039 2075 5.538849 TGTAATCCCACATCGTTAGCATA 57.461 39.130 0.00 0.00 0.00 3.14
2040 2076 5.294356 TGTAATCCCACATCGTTAGCATAC 58.706 41.667 0.00 0.00 0.00 2.39
2041 2077 4.689612 AATCCCACATCGTTAGCATACT 57.310 40.909 0.00 0.00 0.00 2.12
2042 2078 4.689612 ATCCCACATCGTTAGCATACTT 57.310 40.909 0.00 0.00 0.00 2.24
2043 2079 3.792401 TCCCACATCGTTAGCATACTTG 58.208 45.455 0.00 0.00 0.00 3.16
2044 2080 2.872245 CCCACATCGTTAGCATACTTGG 59.128 50.000 0.00 0.00 0.00 3.61
2045 2081 3.531538 CCACATCGTTAGCATACTTGGT 58.468 45.455 0.00 0.00 37.36 3.67
2046 2082 3.938963 CCACATCGTTAGCATACTTGGTT 59.061 43.478 0.00 0.00 34.79 3.67
2062 2098 6.463995 ACTTGGTTTTGCATCTGAAAACTA 57.536 33.333 10.01 2.58 41.22 2.24
2100 2136 6.882656 TGTTTTCTCAAATGTCAATTCCCAA 58.117 32.000 0.00 0.00 0.00 4.12
2101 2137 7.334090 TGTTTTCTCAAATGTCAATTCCCAAA 58.666 30.769 0.00 0.00 0.00 3.28
2110 2146 9.439500 CAAATGTCAATTCCCAAAATGAATACT 57.561 29.630 0.00 0.00 32.31 2.12
2112 2148 6.934056 TGTCAATTCCCAAAATGAATACTGG 58.066 36.000 0.00 0.00 32.31 4.00
2117 2153 6.588719 TTCCCAAAATGAATACTGGACTTG 57.411 37.500 0.00 0.00 0.00 3.16
2122 2158 4.657814 AATGAATACTGGACTTGTGGGT 57.342 40.909 0.00 0.00 0.00 4.51
2148 2184 3.300388 AGGAGGACGCAGAGAAATATCA 58.700 45.455 0.00 0.00 0.00 2.15
2337 2373 4.093408 TCGCTATTGTTTGATCTTGACAGC 59.907 41.667 0.00 0.00 0.00 4.40
2458 2496 7.599353 TGGATAAGTAGGATCCTCTATACCA 57.401 40.000 20.22 18.07 43.00 3.25
2535 2573 3.679502 GCACTTTTGCTTGTGTCTTGTTT 59.320 39.130 0.00 0.00 46.17 2.83
2587 2625 3.041211 AGCTTGTATCACTGATGGCCTA 58.959 45.455 3.32 0.00 0.00 3.93
2589 2627 3.432186 GCTTGTATCACTGATGGCCTACA 60.432 47.826 3.32 3.01 0.00 2.74
2594 2632 3.998913 TCACTGATGGCCTACAATTGA 57.001 42.857 13.59 6.92 0.00 2.57
2690 2762 7.559590 AACATATCTAAAGACCAGCATGAAC 57.440 36.000 0.00 0.00 39.69 3.18
2701 2773 3.264193 ACCAGCATGAACCATCAAGACTA 59.736 43.478 0.00 0.00 39.69 2.59
2736 2808 1.278127 ACCATACCGTTTCCAGGTCAG 59.722 52.381 0.00 0.00 42.81 3.51
2757 2829 7.871463 GGTCAGGGTATGTATTTACAGTACATC 59.129 40.741 0.00 0.00 40.80 3.06
2811 2883 0.446222 GTGACTGTTTGTGTGCGTGT 59.554 50.000 0.00 0.00 0.00 4.49
2838 2910 7.475565 GTGCTATATGATACATTTTCGCTTTCG 59.524 37.037 0.00 0.00 0.00 3.46
2879 2951 2.756374 TATTTGTGTGCGTGCGTGCG 62.756 55.000 0.00 0.00 37.81 5.34
2894 2966 2.923655 GCGTGCGTGCTATATGATACAT 59.076 45.455 0.00 0.00 0.00 2.29
2895 2967 3.367932 GCGTGCGTGCTATATGATACATT 59.632 43.478 0.00 0.00 0.00 2.71
3042 3115 5.734720 CTGGTCAAGACATGGTGTAGTATT 58.265 41.667 0.00 0.00 0.00 1.89
3102 3175 7.870509 TCTATCAATTCTTGCTGCAGTATTT 57.129 32.000 16.64 0.01 0.00 1.40
3180 3253 2.567615 AGCTACTGGTTGGTCCTGTAAG 59.432 50.000 0.00 2.55 45.46 2.34
3287 3367 5.702865 CCTTTATTTATCATGTGATGGCCG 58.297 41.667 5.78 0.00 36.05 6.13
3339 3420 0.246635 CGTCGAGGTTCCAGGTTCAT 59.753 55.000 0.00 0.00 0.00 2.57
3340 3421 1.726853 GTCGAGGTTCCAGGTTCATG 58.273 55.000 0.00 0.00 0.00 3.07
3357 3438 3.706373 GCTTCACCGCTCTCCCCA 61.706 66.667 0.00 0.00 0.00 4.96
3406 3494 2.203538 CCTGCTTTGGTGGTGGCT 60.204 61.111 0.00 0.00 0.00 4.75
3471 3559 0.034574 ATGCATGGCCTGGTTTACGA 60.035 50.000 3.32 0.00 0.00 3.43
3476 3564 2.349755 GCCTGGTTTACGAGGGCA 59.650 61.111 12.10 0.00 41.51 5.36
3506 3595 4.329545 GTCCTTGGTCCGGCAGCA 62.330 66.667 0.00 0.00 0.00 4.41
3555 3644 5.107104 TGCTTTCTTGCTAGATACGTGTTTG 60.107 40.000 0.00 0.00 0.00 2.93
3579 3668 6.821665 TGGGAAAAATCTACAATACTCCTTCG 59.178 38.462 0.00 0.00 0.00 3.79
3587 3676 7.093322 TCTACAATACTCCTTCGAGGTTTAC 57.907 40.000 0.00 0.00 40.77 2.01
3609 3698 4.815846 ACACATCAATTGCAAAGGGTTTTC 59.184 37.500 1.71 0.00 0.00 2.29
3667 3756 8.632679 ACATGAATTGCAGAGAGTTTTAGAAAA 58.367 29.630 0.00 0.00 0.00 2.29
3735 3830 4.270834 AGCATGTGAAAATCAGAGCTCAT 58.729 39.130 17.77 0.00 0.00 2.90
3780 3876 6.512297 TGCTTCTAATGCTACGATGATGTTA 58.488 36.000 0.00 0.00 0.00 2.41
3820 3916 1.006922 GCACACTTGCTTTGCTCCC 60.007 57.895 0.00 0.00 46.17 4.30
3960 4057 4.045104 GTGATGTGGTATTGCTACTCGAG 58.955 47.826 11.84 11.84 0.00 4.04
4330 4453 2.036958 TTCAAGTGGCATCATACGGG 57.963 50.000 0.00 0.00 0.00 5.28
4346 4469 1.318380 GGGGAAGGAGGGGATCTGA 59.682 63.158 0.00 0.00 0.00 3.27
4355 4478 3.044894 GGAGGGGATCTGAATCAAGAGT 58.955 50.000 0.00 0.00 33.21 3.24
4376 4499 2.083774 CGTAATGGTGCTTGTGATGGT 58.916 47.619 0.00 0.00 0.00 3.55
4427 4550 4.067896 CTGGCTTCTTCTTGCAAGTAAGA 58.932 43.478 27.59 26.28 35.02 2.10
4478 4602 3.242867 TCTTGTGAGGATCTCTGGTTGT 58.757 45.455 0.00 0.00 34.92 3.32
4656 4784 6.202954 GGTATCCATTAATGTCTGAGGTTTCG 59.797 42.308 14.25 0.00 0.00 3.46
4698 4826 7.646446 TGCATTCTCATGTTGAAAAGAATTG 57.354 32.000 3.07 2.03 36.56 2.32
4706 4834 8.647143 TCATGTTGAAAAGAATTGAAGAAACC 57.353 30.769 0.00 0.00 0.00 3.27
4768 4896 3.071479 TCGTCCAACTATCAAGGTTTGC 58.929 45.455 0.00 0.00 0.00 3.68
4795 4923 7.598493 TGAAAATTATCAACTTGCTTTGTAGGC 59.402 33.333 0.00 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.689061 TGCAAGAATATCTCATTTTAATGTGCT 58.311 29.630 2.66 0.00 37.65 4.40
17 18 9.368674 CCACAAATCAACATAATTGCAAGAATA 57.631 29.630 4.94 0.00 0.00 1.75
18 19 7.879160 ACCACAAATCAACATAATTGCAAGAAT 59.121 29.630 4.94 0.00 0.00 2.40
19 20 7.171167 CACCACAAATCAACATAATTGCAAGAA 59.829 33.333 4.94 0.00 0.00 2.52
20 21 6.645827 CACCACAAATCAACATAATTGCAAGA 59.354 34.615 4.94 0.00 0.00 3.02
21 22 6.645827 TCACCACAAATCAACATAATTGCAAG 59.354 34.615 4.94 0.00 0.00 4.01
22 23 6.519382 TCACCACAAATCAACATAATTGCAA 58.481 32.000 0.00 0.00 0.00 4.08
23 24 6.015603 TCTCACCACAAATCAACATAATTGCA 60.016 34.615 0.00 0.00 0.00 4.08
24 25 6.389091 TCTCACCACAAATCAACATAATTGC 58.611 36.000 0.00 0.00 0.00 3.56
25 26 7.819644 TCTCTCACCACAAATCAACATAATTG 58.180 34.615 0.00 0.00 0.00 2.32
26 27 8.299570 GTTCTCTCACCACAAATCAACATAATT 58.700 33.333 0.00 0.00 0.00 1.40
27 28 7.094205 GGTTCTCTCACCACAAATCAACATAAT 60.094 37.037 0.00 0.00 36.73 1.28
28 29 6.206634 GGTTCTCTCACCACAAATCAACATAA 59.793 38.462 0.00 0.00 36.73 1.90
29 30 5.705441 GGTTCTCTCACCACAAATCAACATA 59.295 40.000 0.00 0.00 36.73 2.29
30 31 4.520492 GGTTCTCTCACCACAAATCAACAT 59.480 41.667 0.00 0.00 36.73 2.71
31 32 3.882888 GGTTCTCTCACCACAAATCAACA 59.117 43.478 0.00 0.00 36.73 3.33
32 33 4.137543 AGGTTCTCTCACCACAAATCAAC 58.862 43.478 0.00 0.00 39.62 3.18
33 34 4.437682 AGGTTCTCTCACCACAAATCAA 57.562 40.909 0.00 0.00 39.62 2.57
34 35 4.838423 TCTAGGTTCTCTCACCACAAATCA 59.162 41.667 0.00 0.00 39.62 2.57
35 36 5.186021 TCTCTAGGTTCTCTCACCACAAATC 59.814 44.000 0.00 0.00 39.62 2.17
36 37 5.087323 TCTCTAGGTTCTCTCACCACAAAT 58.913 41.667 0.00 0.00 39.62 2.32
37 38 4.480115 TCTCTAGGTTCTCTCACCACAAA 58.520 43.478 0.00 0.00 39.62 2.83
38 39 4.114015 TCTCTAGGTTCTCTCACCACAA 57.886 45.455 0.00 0.00 39.62 3.33
39 40 3.808834 TCTCTAGGTTCTCTCACCACA 57.191 47.619 0.00 0.00 39.62 4.17
40 41 5.669164 AATTCTCTAGGTTCTCTCACCAC 57.331 43.478 0.00 0.00 39.62 4.16
41 42 7.619698 TCAATAATTCTCTAGGTTCTCTCACCA 59.380 37.037 0.00 0.00 39.62 4.17
42 43 8.012957 TCAATAATTCTCTAGGTTCTCTCACC 57.987 38.462 0.00 0.00 37.04 4.02
43 44 9.474920 CATCAATAATTCTCTAGGTTCTCTCAC 57.525 37.037 0.00 0.00 0.00 3.51
44 45 9.206690 ACATCAATAATTCTCTAGGTTCTCTCA 57.793 33.333 0.00 0.00 0.00 3.27
45 46 9.474920 CACATCAATAATTCTCTAGGTTCTCTC 57.525 37.037 0.00 0.00 0.00 3.20
46 47 8.986991 ACACATCAATAATTCTCTAGGTTCTCT 58.013 33.333 0.00 0.00 0.00 3.10
67 68 9.547753 GGACAACTATGAACTGAATATACACAT 57.452 33.333 0.00 0.00 0.00 3.21
68 69 8.758829 AGGACAACTATGAACTGAATATACACA 58.241 33.333 0.00 0.00 0.00 3.72
69 70 9.035607 CAGGACAACTATGAACTGAATATACAC 57.964 37.037 0.00 0.00 36.57 2.90
70 71 8.758829 ACAGGACAACTATGAACTGAATATACA 58.241 33.333 0.00 0.00 37.31 2.29
71 72 9.601217 AACAGGACAACTATGAACTGAATATAC 57.399 33.333 0.00 0.00 37.31 1.47
75 76 9.520515 AATAAACAGGACAACTATGAACTGAAT 57.479 29.630 0.00 0.00 37.31 2.57
76 77 8.918202 AATAAACAGGACAACTATGAACTGAA 57.082 30.769 0.00 0.00 37.31 3.02
77 78 9.431887 GTAATAAACAGGACAACTATGAACTGA 57.568 33.333 0.00 0.00 37.31 3.41
78 79 9.436957 AGTAATAAACAGGACAACTATGAACTG 57.563 33.333 0.00 0.00 38.69 3.16
79 80 9.436957 CAGTAATAAACAGGACAACTATGAACT 57.563 33.333 0.00 0.00 0.00 3.01
80 81 8.175716 GCAGTAATAAACAGGACAACTATGAAC 58.824 37.037 0.00 0.00 0.00 3.18
81 82 7.880713 TGCAGTAATAAACAGGACAACTATGAA 59.119 33.333 0.00 0.00 0.00 2.57
82 83 7.390823 TGCAGTAATAAACAGGACAACTATGA 58.609 34.615 0.00 0.00 0.00 2.15
83 84 7.609760 TGCAGTAATAAACAGGACAACTATG 57.390 36.000 0.00 0.00 0.00 2.23
84 85 8.512138 GTTTGCAGTAATAAACAGGACAACTAT 58.488 33.333 0.00 0.00 0.00 2.12
85 86 7.040961 GGTTTGCAGTAATAAACAGGACAACTA 60.041 37.037 0.00 0.00 0.00 2.24
86 87 6.238925 GGTTTGCAGTAATAAACAGGACAACT 60.239 38.462 0.00 0.00 0.00 3.16
87 88 5.918576 GGTTTGCAGTAATAAACAGGACAAC 59.081 40.000 0.00 0.00 0.00 3.32
88 89 5.830991 AGGTTTGCAGTAATAAACAGGACAA 59.169 36.000 0.00 0.00 0.00 3.18
89 90 5.240623 CAGGTTTGCAGTAATAAACAGGACA 59.759 40.000 0.00 0.00 0.00 4.02
90 91 5.472137 TCAGGTTTGCAGTAATAAACAGGAC 59.528 40.000 0.00 0.00 0.00 3.85
91 92 5.626142 TCAGGTTTGCAGTAATAAACAGGA 58.374 37.500 0.00 0.00 0.00 3.86
92 93 5.957842 TCAGGTTTGCAGTAATAAACAGG 57.042 39.130 0.00 0.00 0.00 4.00
93 94 6.363357 GCTTTCAGGTTTGCAGTAATAAACAG 59.637 38.462 0.00 0.00 0.00 3.16
94 95 6.040391 AGCTTTCAGGTTTGCAGTAATAAACA 59.960 34.615 0.00 0.00 0.00 2.83
95 96 6.447162 AGCTTTCAGGTTTGCAGTAATAAAC 58.553 36.000 0.00 0.00 0.00 2.01
96 97 6.648879 AGCTTTCAGGTTTGCAGTAATAAA 57.351 33.333 0.00 0.00 0.00 1.40
97 98 7.938140 ATAGCTTTCAGGTTTGCAGTAATAA 57.062 32.000 0.00 0.00 0.00 1.40
98 99 9.456147 TTTATAGCTTTCAGGTTTGCAGTAATA 57.544 29.630 0.00 0.00 0.00 0.98
99 100 7.938140 TTATAGCTTTCAGGTTTGCAGTAAT 57.062 32.000 0.00 0.00 0.00 1.89
100 101 7.229707 TGTTTATAGCTTTCAGGTTTGCAGTAA 59.770 33.333 0.00 0.00 0.00 2.24
101 102 6.712998 TGTTTATAGCTTTCAGGTTTGCAGTA 59.287 34.615 0.00 0.00 0.00 2.74
102 103 5.534654 TGTTTATAGCTTTCAGGTTTGCAGT 59.465 36.000 0.00 0.00 0.00 4.40
103 104 5.858581 GTGTTTATAGCTTTCAGGTTTGCAG 59.141 40.000 0.00 0.00 0.00 4.41
104 105 5.300539 TGTGTTTATAGCTTTCAGGTTTGCA 59.699 36.000 0.00 0.00 0.00 4.08
105 106 5.768317 TGTGTTTATAGCTTTCAGGTTTGC 58.232 37.500 0.00 0.00 0.00 3.68
106 107 6.206634 TCCTGTGTTTATAGCTTTCAGGTTTG 59.793 38.462 0.00 0.00 40.91 2.93
107 108 6.303839 TCCTGTGTTTATAGCTTTCAGGTTT 58.696 36.000 0.00 0.00 40.91 3.27
108 109 5.876357 TCCTGTGTTTATAGCTTTCAGGTT 58.124 37.500 0.00 0.00 40.91 3.50
109 110 5.499004 TCCTGTGTTTATAGCTTTCAGGT 57.501 39.130 0.00 0.00 40.91 4.00
110 111 5.882557 ACATCCTGTGTTTATAGCTTTCAGG 59.117 40.000 0.00 0.00 38.01 3.86
111 112 6.992063 ACATCCTGTGTTTATAGCTTTCAG 57.008 37.500 0.00 0.00 38.01 3.02
124 125 4.040829 TCATGTGAGAAGAACATCCTGTGT 59.959 41.667 0.00 0.00 44.84 3.72
125 126 4.572909 TCATGTGAGAAGAACATCCTGTG 58.427 43.478 0.00 0.00 36.10 3.66
126 127 4.897509 TCATGTGAGAAGAACATCCTGT 57.102 40.909 0.00 0.00 36.10 4.00
127 128 5.704515 ACTTTCATGTGAGAAGAACATCCTG 59.295 40.000 5.34 0.00 36.10 3.86
128 129 5.874093 ACTTTCATGTGAGAAGAACATCCT 58.126 37.500 5.34 0.00 36.10 3.24
129 130 7.856145 ATACTTTCATGTGAGAAGAACATCC 57.144 36.000 5.34 0.00 36.10 3.51
130 131 9.593134 ACTATACTTTCATGTGAGAAGAACATC 57.407 33.333 5.34 0.00 36.10 3.06
131 132 9.950496 AACTATACTTTCATGTGAGAAGAACAT 57.050 29.630 5.34 0.00 38.81 2.71
132 133 9.778741 AAACTATACTTTCATGTGAGAAGAACA 57.221 29.630 5.34 0.00 0.00 3.18
135 136 9.862371 GAGAAACTATACTTTCATGTGAGAAGA 57.138 33.333 7.37 0.00 33.26 2.87
136 137 9.868277 AGAGAAACTATACTTTCATGTGAGAAG 57.132 33.333 7.37 3.21 33.26 2.85
165 166 8.641541 GCCAGAAATGGGAATTAAGATAAATCA 58.358 33.333 0.00 0.00 0.00 2.57
166 167 8.641541 TGCCAGAAATGGGAATTAAGATAAATC 58.358 33.333 0.00 0.00 0.00 2.17
167 168 8.551682 TGCCAGAAATGGGAATTAAGATAAAT 57.448 30.769 0.00 0.00 0.00 1.40
168 169 7.969690 TGCCAGAAATGGGAATTAAGATAAA 57.030 32.000 0.00 0.00 0.00 1.40
169 170 9.653516 TTATGCCAGAAATGGGAATTAAGATAA 57.346 29.630 0.00 0.00 31.64 1.75
170 171 9.653516 TTTATGCCAGAAATGGGAATTAAGATA 57.346 29.630 0.00 0.00 31.64 1.98
171 172 8.424133 GTTTATGCCAGAAATGGGAATTAAGAT 58.576 33.333 0.00 0.00 31.64 2.40
172 173 7.619302 AGTTTATGCCAGAAATGGGAATTAAGA 59.381 33.333 0.00 0.00 31.64 2.10
173 174 7.785033 AGTTTATGCCAGAAATGGGAATTAAG 58.215 34.615 0.00 0.00 31.64 1.85
174 175 7.732222 AGTTTATGCCAGAAATGGGAATTAA 57.268 32.000 0.00 0.00 31.64 1.40
175 176 8.830915 TTAGTTTATGCCAGAAATGGGAATTA 57.169 30.769 0.00 0.00 31.64 1.40
176 177 7.732222 TTAGTTTATGCCAGAAATGGGAATT 57.268 32.000 0.00 0.00 31.64 2.17
177 178 7.732222 TTTAGTTTATGCCAGAAATGGGAAT 57.268 32.000 0.00 0.00 31.64 3.01
178 179 7.732222 ATTTAGTTTATGCCAGAAATGGGAA 57.268 32.000 0.00 0.00 31.64 3.97
179 180 8.830915 TTATTTAGTTTATGCCAGAAATGGGA 57.169 30.769 0.00 0.00 0.00 4.37
228 229 9.613428 ACTGCTTGATTTAGTAATACATTAGCA 57.387 29.630 11.84 11.84 0.00 3.49
229 230 9.869844 CACTGCTTGATTTAGTAATACATTAGC 57.130 33.333 0.00 0.00 0.00 3.09
231 232 9.899661 ACCACTGCTTGATTTAGTAATACATTA 57.100 29.630 0.00 0.00 0.00 1.90
232 233 8.677300 CACCACTGCTTGATTTAGTAATACATT 58.323 33.333 0.00 0.00 0.00 2.71
233 234 7.829211 ACACCACTGCTTGATTTAGTAATACAT 59.171 33.333 0.00 0.00 0.00 2.29
234 235 7.119116 CACACCACTGCTTGATTTAGTAATACA 59.881 37.037 0.00 0.00 0.00 2.29
235 236 7.464358 CACACCACTGCTTGATTTAGTAATAC 58.536 38.462 0.00 0.00 0.00 1.89
236 237 6.093495 GCACACCACTGCTTGATTTAGTAATA 59.907 38.462 0.00 0.00 34.06 0.98
237 238 5.106157 GCACACCACTGCTTGATTTAGTAAT 60.106 40.000 0.00 0.00 34.06 1.89
238 239 4.215399 GCACACCACTGCTTGATTTAGTAA 59.785 41.667 0.00 0.00 34.06 2.24
239 240 3.751175 GCACACCACTGCTTGATTTAGTA 59.249 43.478 0.00 0.00 34.06 1.82
240 241 2.554032 GCACACCACTGCTTGATTTAGT 59.446 45.455 0.00 0.00 34.06 2.24
241 242 2.553602 TGCACACCACTGCTTGATTTAG 59.446 45.455 0.00 0.00 38.07 1.85
242 243 2.580962 TGCACACCACTGCTTGATTTA 58.419 42.857 0.00 0.00 38.07 1.40
243 244 1.401761 TGCACACCACTGCTTGATTT 58.598 45.000 0.00 0.00 38.07 2.17
244 245 1.624336 ATGCACACCACTGCTTGATT 58.376 45.000 0.00 0.00 38.07 2.57
245 246 1.271379 CAATGCACACCACTGCTTGAT 59.729 47.619 0.00 0.00 38.07 2.57
246 247 0.669619 CAATGCACACCACTGCTTGA 59.330 50.000 0.00 0.00 38.07 3.02
247 248 0.319211 CCAATGCACACCACTGCTTG 60.319 55.000 0.00 0.00 38.07 4.01
248 249 0.756442 ACCAATGCACACCACTGCTT 60.756 50.000 0.00 0.00 38.07 3.91
249 250 0.110295 TACCAATGCACACCACTGCT 59.890 50.000 0.00 0.00 38.07 4.24
250 251 1.133025 GATACCAATGCACACCACTGC 59.867 52.381 0.00 0.00 37.70 4.40
251 252 1.745087 GGATACCAATGCACACCACTG 59.255 52.381 0.00 0.00 0.00 3.66
252 253 1.635487 AGGATACCAATGCACACCACT 59.365 47.619 0.00 0.00 37.17 4.00
253 254 2.128771 AGGATACCAATGCACACCAC 57.871 50.000 0.00 0.00 37.17 4.16
254 255 2.897271 AAGGATACCAATGCACACCA 57.103 45.000 0.00 0.00 37.17 4.17
255 256 5.852282 ATAAAAGGATACCAATGCACACC 57.148 39.130 0.00 0.00 37.17 4.16
256 257 7.067008 ACTGTATAAAAGGATACCAATGCACAC 59.933 37.037 0.00 0.00 32.24 3.82
257 258 7.066887 CACTGTATAAAAGGATACCAATGCACA 59.933 37.037 0.00 0.00 32.24 4.57
258 259 7.067008 ACACTGTATAAAAGGATACCAATGCAC 59.933 37.037 0.00 0.00 32.24 4.57
259 260 7.116075 ACACTGTATAAAAGGATACCAATGCA 58.884 34.615 0.00 0.00 32.24 3.96
260 261 7.568199 ACACTGTATAAAAGGATACCAATGC 57.432 36.000 0.00 0.00 32.24 3.56
263 264 9.621629 CCATTACACTGTATAAAAGGATACCAA 57.378 33.333 0.00 0.00 32.24 3.67
264 265 8.774183 ACCATTACACTGTATAAAAGGATACCA 58.226 33.333 7.43 0.00 32.24 3.25
265 266 9.623000 AACCATTACACTGTATAAAAGGATACC 57.377 33.333 7.43 0.00 32.24 2.73
268 269 9.174166 GTGAACCATTACACTGTATAAAAGGAT 57.826 33.333 7.43 0.00 34.65 3.24
292 293 4.514441 AGAAAGAGCAGATTTCACACAGTG 59.486 41.667 0.00 0.00 38.79 3.66
296 297 7.061557 GCATTTTAGAAAGAGCAGATTTCACAC 59.938 37.037 9.91 0.00 38.79 3.82
298 299 7.061557 GTGCATTTTAGAAAGAGCAGATTTCAC 59.938 37.037 9.91 0.00 38.79 3.18
401 404 7.331934 ACAATATGTACTTTAGTGTCAGTGCAG 59.668 37.037 0.00 0.00 38.76 4.41
525 529 5.065218 GGCACAGATTTGATTATCGACTTGT 59.935 40.000 0.00 0.00 0.00 3.16
554 558 3.570550 AGAGGTAGAGTTCATACCGATGC 59.429 47.826 0.00 0.00 46.14 3.91
584 588 5.331902 ACGACAATCACTGAAAACAGTTTG 58.668 37.500 0.00 10.98 32.26 2.93
585 589 5.560966 ACGACAATCACTGAAAACAGTTT 57.439 34.783 0.00 0.00 32.26 2.66
602 606 3.106242 AGTGCATTGTGAACTACGACA 57.894 42.857 0.00 0.00 33.56 4.35
629 633 8.428186 AATTCAAACTGTAAAGTTCGTGACTA 57.572 30.769 0.00 0.00 37.72 2.59
647 651 7.551035 AGCACAACTGCAAAATTAATTCAAA 57.449 28.000 0.10 0.00 46.97 2.69
654 658 5.241506 AGAAGCTAGCACAACTGCAAAATTA 59.758 36.000 18.83 0.00 46.97 1.40
681 685 7.236847 TGGAAACCTAAGACATAAAGGAAGAGA 59.763 37.037 0.00 0.00 34.34 3.10
722 728 6.317088 ACACGATGCTTGAAATAAACTCATG 58.683 36.000 0.00 0.00 0.00 3.07
730 736 7.384932 CCATATGACTACACGATGCTTGAAATA 59.615 37.037 3.65 0.00 0.00 1.40
756 762 5.394553 GGGCCATTAGCTATTGATAAATGGC 60.395 44.000 27.85 27.85 41.84 4.40
759 765 5.902760 TGGGGCCATTAGCTATTGATAAAT 58.097 37.500 15.59 0.00 43.05 1.40
767 773 1.759101 TGGATGGGGCCATTAGCTAT 58.241 50.000 4.39 0.00 43.05 2.97
769 775 2.572808 ATGGATGGGGCCATTAGCT 58.427 52.632 4.39 0.00 46.29 3.32
841 847 7.177392 AGCTTTTCAGTTAGCTTTGGTGATATT 59.823 33.333 0.00 0.00 45.03 1.28
860 866 1.795286 CGGCTGGATATCGAGCTTTTC 59.205 52.381 30.87 17.76 45.36 2.29
862 868 0.601311 GCGGCTGGATATCGAGCTTT 60.601 55.000 30.87 0.00 45.36 3.51
864 870 1.467678 AAGCGGCTGGATATCGAGCT 61.468 55.000 30.87 17.55 45.36 4.09
870 876 2.639839 AGGAATGTAAGCGGCTGGATAT 59.360 45.455 1.81 0.00 0.00 1.63
894 900 5.016831 TCAAGTGTATAGCTCTGACTCCAA 58.983 41.667 0.00 0.00 0.00 3.53
907 913 2.232696 TGGCTTCTGCGTCAAGTGTATA 59.767 45.455 0.00 0.00 40.82 1.47
908 914 1.001974 TGGCTTCTGCGTCAAGTGTAT 59.998 47.619 0.00 0.00 40.82 2.29
941 947 6.833041 TGTGGAGGAACTTGAACAAACTATA 58.167 36.000 0.00 0.00 41.55 1.31
993 1003 4.957954 TGGCATTGAAGAAGGCATAATCTT 59.042 37.500 0.00 0.00 40.75 2.40
994 1004 4.539726 TGGCATTGAAGAAGGCATAATCT 58.460 39.130 0.00 0.00 40.75 2.40
995 1005 4.924305 TGGCATTGAAGAAGGCATAATC 57.076 40.909 0.00 0.00 40.75 1.75
1000 1010 5.279106 GCATAATATGGCATTGAAGAAGGCA 60.279 40.000 4.78 0.00 40.75 4.75
1001 1011 5.047519 AGCATAATATGGCATTGAAGAAGGC 60.048 40.000 4.78 0.00 38.17 4.35
1002 1012 6.208007 TCAGCATAATATGGCATTGAAGAAGG 59.792 38.462 4.78 0.00 0.00 3.46
1003 1013 7.082602 GTCAGCATAATATGGCATTGAAGAAG 58.917 38.462 4.78 0.00 0.00 2.85
1041 1051 2.029073 CACGAGGGTTGCACGAGT 59.971 61.111 0.24 0.00 0.00 4.18
1055 1065 7.569297 TGTACAAGAAAAATAGCTACAACACG 58.431 34.615 0.00 0.00 0.00 4.49
1056 1066 9.893305 AATGTACAAGAAAAATAGCTACAACAC 57.107 29.630 0.00 0.00 0.00 3.32
1126 1136 7.124901 TCTCTTCTACAGCTTGTTCCTGAATAT 59.875 37.037 0.00 0.00 34.47 1.28
1133 1143 4.529109 ACTCTCTTCTACAGCTTGTTCC 57.471 45.455 0.00 0.00 0.00 3.62
1138 1148 5.200483 AGCAGATACTCTCTTCTACAGCTT 58.800 41.667 0.00 0.00 29.16 3.74
1139 1149 4.792068 AGCAGATACTCTCTTCTACAGCT 58.208 43.478 0.00 0.00 29.16 4.24
1140 1150 4.578516 TGAGCAGATACTCTCTTCTACAGC 59.421 45.833 0.00 0.00 37.58 4.40
1141 1151 6.882610 ATGAGCAGATACTCTCTTCTACAG 57.117 41.667 0.00 0.00 37.58 2.74
1142 1152 8.932434 ATTATGAGCAGATACTCTCTTCTACA 57.068 34.615 0.00 0.00 37.58 2.74
1145 1155 9.453572 CTCTATTATGAGCAGATACTCTCTTCT 57.546 37.037 0.00 0.00 37.58 2.85
1146 1156 9.448438 TCTCTATTATGAGCAGATACTCTCTTC 57.552 37.037 0.00 0.00 37.58 2.87
1175 1185 4.135153 CCTCGTCACAGGGAGGCG 62.135 72.222 0.00 0.00 43.03 5.52
1183 1193 7.383687 ACTTAAATAATGAACTCCTCGTCACA 58.616 34.615 0.00 0.00 0.00 3.58
1207 1217 3.911868 TGAAAATGGCATGCACAACTAC 58.088 40.909 21.36 5.56 0.00 2.73
1254 1264 4.996758 GCTTTTGCCCTATTGTCAAAATGT 59.003 37.500 0.00 0.00 38.51 2.71
1264 1274 3.456380 TTCCTCTGCTTTTGCCCTATT 57.544 42.857 0.00 0.00 46.87 1.73
1276 1286 9.736023 AACGAAAATATAATCAATTTCCTCTGC 57.264 29.630 0.00 0.00 0.00 4.26
1298 1308 3.556423 GCTCCTGGTCCTAAGAAAAACGA 60.556 47.826 0.00 0.00 0.00 3.85
1349 1359 6.626623 GCCTACTTCATTGCAGAACAAATGAT 60.627 38.462 0.00 0.00 42.86 2.45
1367 1377 2.639839 AGATTGTGGAGTGTGCCTACTT 59.360 45.455 0.00 0.00 0.00 2.24
1453 1463 2.484287 AATCAGGTGGGAAGGGTGCG 62.484 60.000 0.00 0.00 0.00 5.34
1463 1473 1.746615 CTGCGGGTGAATCAGGTGG 60.747 63.158 0.00 0.00 0.00 4.61
1645 1655 4.937620 ACAGCTTATGCCCAATCATATACG 59.062 41.667 0.00 0.00 40.80 3.06
1664 1674 5.751509 TCATACAATGTGTTCGGTATACAGC 59.248 40.000 5.01 0.00 30.93 4.40
1673 1683 5.175859 ACTAAGGGTCATACAATGTGTTCG 58.824 41.667 0.00 0.00 0.00 3.95
1676 1686 7.987458 CAGATAACTAAGGGTCATACAATGTGT 59.013 37.037 0.00 0.00 0.00 3.72
1682 1692 8.727100 ATCATCAGATAACTAAGGGTCATACA 57.273 34.615 0.00 0.00 31.14 2.29
1784 1820 2.912956 TGGCAGAGGTAGAGGAACAATT 59.087 45.455 0.00 0.00 0.00 2.32
1801 1837 1.969208 TGAATGCAAGACCAAATGGCA 59.031 42.857 0.00 0.00 39.32 4.92
1887 1923 4.653341 ACCAAACCATCAAGACCATCAAAA 59.347 37.500 0.00 0.00 0.00 2.44
1888 1924 4.222336 ACCAAACCATCAAGACCATCAAA 58.778 39.130 0.00 0.00 0.00 2.69
1908 1944 2.775960 AGTAGTAGCAATACCCCCAACC 59.224 50.000 0.00 0.00 0.00 3.77
1910 1946 4.324719 CCAAAGTAGTAGCAATACCCCCAA 60.325 45.833 0.00 0.00 0.00 4.12
1914 1950 3.626217 GTGCCAAAGTAGTAGCAATACCC 59.374 47.826 0.00 0.00 36.91 3.69
1918 1954 4.286297 TGAGTGCCAAAGTAGTAGCAAT 57.714 40.909 0.00 0.00 36.91 3.56
1922 1958 4.832248 TCCAATGAGTGCCAAAGTAGTAG 58.168 43.478 0.00 0.00 0.00 2.57
1923 1959 4.901197 TCCAATGAGTGCCAAAGTAGTA 57.099 40.909 0.00 0.00 0.00 1.82
1924 1960 3.788227 TCCAATGAGTGCCAAAGTAGT 57.212 42.857 0.00 0.00 0.00 2.73
1960 1996 3.081804 AGGTACCCAAGCAAATCGAAAG 58.918 45.455 8.74 0.00 0.00 2.62
1961 1997 3.149005 AGGTACCCAAGCAAATCGAAA 57.851 42.857 8.74 0.00 0.00 3.46
1962 1998 2.871096 AGGTACCCAAGCAAATCGAA 57.129 45.000 8.74 0.00 0.00 3.71
1963 1999 2.871096 AAGGTACCCAAGCAAATCGA 57.129 45.000 8.74 0.00 0.00 3.59
1964 2000 6.877611 ATAATAAGGTACCCAAGCAAATCG 57.122 37.500 8.74 0.00 0.00 3.34
1965 2001 8.914011 AGAAATAATAAGGTACCCAAGCAAATC 58.086 33.333 8.74 0.00 0.00 2.17
1966 2002 8.695456 CAGAAATAATAAGGTACCCAAGCAAAT 58.305 33.333 8.74 0.00 0.00 2.32
1967 2003 7.363443 GCAGAAATAATAAGGTACCCAAGCAAA 60.363 37.037 8.74 0.00 0.00 3.68
1968 2004 6.096282 GCAGAAATAATAAGGTACCCAAGCAA 59.904 38.462 8.74 0.00 0.00 3.91
1969 2005 5.592688 GCAGAAATAATAAGGTACCCAAGCA 59.407 40.000 8.74 0.00 0.00 3.91
1970 2006 5.009710 GGCAGAAATAATAAGGTACCCAAGC 59.990 44.000 8.74 0.00 0.00 4.01
1971 2007 6.365520 AGGCAGAAATAATAAGGTACCCAAG 58.634 40.000 8.74 0.00 0.00 3.61
1972 2008 6.335781 AGGCAGAAATAATAAGGTACCCAA 57.664 37.500 8.74 0.00 0.00 4.12
1973 2009 5.987019 AGGCAGAAATAATAAGGTACCCA 57.013 39.130 8.74 0.00 0.00 4.51
1974 2010 7.075851 AGTAGGCAGAAATAATAAGGTACCC 57.924 40.000 8.74 0.00 0.00 3.69
1986 2022 8.540388 TGAGAAAACACTATAGTAGGCAGAAAT 58.460 33.333 4.74 0.00 0.00 2.17
1987 2023 7.903145 TGAGAAAACACTATAGTAGGCAGAAA 58.097 34.615 4.74 0.00 0.00 2.52
1988 2024 7.476540 TGAGAAAACACTATAGTAGGCAGAA 57.523 36.000 4.74 0.00 0.00 3.02
1989 2025 7.476540 TTGAGAAAACACTATAGTAGGCAGA 57.523 36.000 4.74 0.00 0.00 4.26
1990 2026 7.819900 ACTTTGAGAAAACACTATAGTAGGCAG 59.180 37.037 4.74 0.00 0.00 4.85
1991 2027 7.676947 ACTTTGAGAAAACACTATAGTAGGCA 58.323 34.615 4.74 0.00 0.00 4.75
1992 2028 8.443937 CAACTTTGAGAAAACACTATAGTAGGC 58.556 37.037 4.74 0.00 0.00 3.93
1993 2029 9.490379 ACAACTTTGAGAAAACACTATAGTAGG 57.510 33.333 4.74 0.00 0.00 3.18
1999 2035 8.793592 GGGATTACAACTTTGAGAAAACACTAT 58.206 33.333 0.00 0.00 0.00 2.12
2000 2036 7.776030 TGGGATTACAACTTTGAGAAAACACTA 59.224 33.333 0.00 0.00 0.00 2.74
2001 2037 6.605594 TGGGATTACAACTTTGAGAAAACACT 59.394 34.615 0.00 0.00 0.00 3.55
2002 2038 6.695713 GTGGGATTACAACTTTGAGAAAACAC 59.304 38.462 0.00 0.00 0.00 3.32
2003 2039 6.378564 TGTGGGATTACAACTTTGAGAAAACA 59.621 34.615 0.00 0.00 0.00 2.83
2004 2040 6.801575 TGTGGGATTACAACTTTGAGAAAAC 58.198 36.000 0.00 0.00 0.00 2.43
2005 2041 7.521423 CGATGTGGGATTACAACTTTGAGAAAA 60.521 37.037 0.00 0.00 33.69 2.29
2006 2042 6.072728 CGATGTGGGATTACAACTTTGAGAAA 60.073 38.462 0.00 0.00 33.69 2.52
2007 2043 5.411361 CGATGTGGGATTACAACTTTGAGAA 59.589 40.000 0.00 0.00 33.69 2.87
2008 2044 4.935205 CGATGTGGGATTACAACTTTGAGA 59.065 41.667 0.00 0.00 33.69 3.27
2009 2045 4.695455 ACGATGTGGGATTACAACTTTGAG 59.305 41.667 0.00 0.00 33.69 3.02
2010 2046 4.647611 ACGATGTGGGATTACAACTTTGA 58.352 39.130 0.00 0.00 33.69 2.69
2011 2047 5.371115 AACGATGTGGGATTACAACTTTG 57.629 39.130 0.00 0.00 33.69 2.77
2012 2048 5.123344 GCTAACGATGTGGGATTACAACTTT 59.877 40.000 0.00 0.00 33.69 2.66
2013 2049 4.634443 GCTAACGATGTGGGATTACAACTT 59.366 41.667 0.00 0.00 33.69 2.66
2014 2050 4.189231 GCTAACGATGTGGGATTACAACT 58.811 43.478 0.00 0.00 33.69 3.16
2015 2051 3.936453 TGCTAACGATGTGGGATTACAAC 59.064 43.478 0.00 0.00 33.69 3.32
2016 2052 4.209307 TGCTAACGATGTGGGATTACAA 57.791 40.909 0.00 0.00 33.69 2.41
2017 2053 3.897141 TGCTAACGATGTGGGATTACA 57.103 42.857 0.00 0.00 34.63 2.41
2018 2054 5.539048 AGTATGCTAACGATGTGGGATTAC 58.461 41.667 0.00 0.00 0.00 1.89
2019 2055 5.801531 AGTATGCTAACGATGTGGGATTA 57.198 39.130 0.00 0.00 0.00 1.75
2020 2056 4.689612 AGTATGCTAACGATGTGGGATT 57.310 40.909 0.00 0.00 0.00 3.01
2021 2057 4.380531 CAAGTATGCTAACGATGTGGGAT 58.619 43.478 0.00 0.00 0.00 3.85
2022 2058 3.431626 CCAAGTATGCTAACGATGTGGGA 60.432 47.826 0.00 0.00 0.00 4.37
2023 2059 2.872245 CCAAGTATGCTAACGATGTGGG 59.128 50.000 0.00 0.00 0.00 4.61
2024 2060 3.531538 ACCAAGTATGCTAACGATGTGG 58.468 45.455 0.00 0.00 0.00 4.17
2025 2061 5.545658 AAACCAAGTATGCTAACGATGTG 57.454 39.130 0.00 0.00 0.00 3.21
2026 2062 5.619086 GCAAAACCAAGTATGCTAACGATGT 60.619 40.000 0.00 0.00 35.93 3.06
2027 2063 4.793216 GCAAAACCAAGTATGCTAACGATG 59.207 41.667 0.00 0.00 35.93 3.84
2028 2064 4.457603 TGCAAAACCAAGTATGCTAACGAT 59.542 37.500 0.00 0.00 39.49 3.73
2029 2065 3.815962 TGCAAAACCAAGTATGCTAACGA 59.184 39.130 0.00 0.00 39.49 3.85
2030 2066 4.153958 TGCAAAACCAAGTATGCTAACG 57.846 40.909 0.00 0.00 39.49 3.18
2031 2067 5.801947 CAGATGCAAAACCAAGTATGCTAAC 59.198 40.000 0.00 0.00 39.49 2.34
2032 2068 5.709631 TCAGATGCAAAACCAAGTATGCTAA 59.290 36.000 0.00 0.00 39.49 3.09
2033 2069 5.252547 TCAGATGCAAAACCAAGTATGCTA 58.747 37.500 0.00 0.00 39.49 3.49
2034 2070 4.081406 TCAGATGCAAAACCAAGTATGCT 58.919 39.130 0.00 0.00 39.49 3.79
2035 2071 4.439305 TCAGATGCAAAACCAAGTATGC 57.561 40.909 0.00 0.00 39.22 3.14
2036 2072 6.925165 AGTTTTCAGATGCAAAACCAAGTATG 59.075 34.615 7.21 0.00 42.40 2.39
2037 2073 7.054491 AGTTTTCAGATGCAAAACCAAGTAT 57.946 32.000 7.21 0.00 42.40 2.12
2038 2074 6.463995 AGTTTTCAGATGCAAAACCAAGTA 57.536 33.333 7.21 0.00 42.40 2.24
2039 2075 5.343307 AGTTTTCAGATGCAAAACCAAGT 57.657 34.783 7.21 0.00 42.40 3.16
2040 2076 6.306356 CGATAGTTTTCAGATGCAAAACCAAG 59.694 38.462 7.21 0.00 42.40 3.61
2041 2077 6.148948 CGATAGTTTTCAGATGCAAAACCAA 58.851 36.000 7.21 0.00 42.40 3.67
2042 2078 5.335583 CCGATAGTTTTCAGATGCAAAACCA 60.336 40.000 7.21 0.00 42.40 3.67
2043 2079 5.095490 CCGATAGTTTTCAGATGCAAAACC 58.905 41.667 7.21 0.00 42.40 3.27
2044 2080 4.558860 GCCGATAGTTTTCAGATGCAAAAC 59.441 41.667 3.27 3.27 41.95 2.43
2045 2081 4.380444 GGCCGATAGTTTTCAGATGCAAAA 60.380 41.667 0.00 0.00 0.00 2.44
2046 2082 3.128589 GGCCGATAGTTTTCAGATGCAAA 59.871 43.478 0.00 0.00 0.00 3.68
2062 2098 5.132502 TGAGAAAACATCATTATGGCCGAT 58.867 37.500 0.00 0.00 37.43 4.18
2100 2136 4.766891 CACCCACAAGTCCAGTATTCATTT 59.233 41.667 0.00 0.00 0.00 2.32
2101 2137 4.042809 TCACCCACAAGTCCAGTATTCATT 59.957 41.667 0.00 0.00 0.00 2.57
2110 2146 1.127567 CCTCCTCACCCACAAGTCCA 61.128 60.000 0.00 0.00 0.00 4.02
2112 2148 0.610687 CTCCTCCTCACCCACAAGTC 59.389 60.000 0.00 0.00 0.00 3.01
2117 2153 2.352032 CGTCCTCCTCCTCACCCAC 61.352 68.421 0.00 0.00 0.00 4.61
2122 2158 1.379176 CTCTGCGTCCTCCTCCTCA 60.379 63.158 0.00 0.00 0.00 3.86
2148 2184 6.262944 TCAACACTTTCACTTTCAGCATATGT 59.737 34.615 4.29 0.00 0.00 2.29
2203 2239 7.506114 ACATAACTGAAACTGAACTCTAACCA 58.494 34.615 0.00 0.00 0.00 3.67
2292 2328 1.388547 GGATTTTGTAGCCGCATGGA 58.611 50.000 0.00 0.00 37.49 3.41
2298 2334 1.436983 GCGAGGGGATTTTGTAGCCG 61.437 60.000 0.00 0.00 0.00 5.52
2337 2373 8.478877 AGTTACAGAATATAACAGGTTCAGAGG 58.521 37.037 0.00 0.00 35.39 3.69
2535 2573 4.578516 TCAGCTTCACCATTTCGAAAAGAA 59.421 37.500 15.66 14.49 37.01 2.52
2569 2607 4.835284 TTGTAGGCCATCAGTGATACAA 57.165 40.909 5.01 12.36 31.84 2.41
2587 2625 3.678056 TCTAAGCACTCCGTCAATTGT 57.322 42.857 5.13 0.00 0.00 2.71
2589 2627 3.055094 ACCATCTAAGCACTCCGTCAATT 60.055 43.478 0.00 0.00 0.00 2.32
2594 2632 0.537188 CCACCATCTAAGCACTCCGT 59.463 55.000 0.00 0.00 0.00 4.69
2679 2751 2.040813 AGTCTTGATGGTTCATGCTGGT 59.959 45.455 0.00 0.00 0.00 4.00
2683 2755 5.587844 AGTTGATAGTCTTGATGGTTCATGC 59.412 40.000 0.00 0.00 0.00 4.06
2690 2762 6.041511 CAGTCTCAGTTGATAGTCTTGATGG 58.958 44.000 0.00 0.00 0.00 3.51
2701 2773 3.452627 GGTATGGTCCAGTCTCAGTTGAT 59.547 47.826 0.00 0.00 0.00 2.57
2811 2883 7.728847 AAGCGAAAATGTATCATATAGCACA 57.271 32.000 0.00 0.00 0.00 4.57
2838 2910 5.590530 AGTCACAGTATCCTCATCTTGAC 57.409 43.478 0.00 0.00 33.76 3.18
2895 2967 5.957168 TCCTCATCTTGATTATGGCCAAAAA 59.043 36.000 10.96 8.13 0.00 1.94
2900 2972 6.059787 AGTATCCTCATCTTGATTATGGCC 57.940 41.667 0.00 0.00 0.00 5.36
2903 2975 9.205719 CAGTCAAGTATCCTCATCTTGATTATG 57.794 37.037 9.46 6.42 45.55 1.90
2904 2976 8.932610 ACAGTCAAGTATCCTCATCTTGATTAT 58.067 33.333 9.46 0.00 45.55 1.28
2906 2978 7.192852 ACAGTCAAGTATCCTCATCTTGATT 57.807 36.000 9.46 3.84 45.55 2.57
2977 3050 3.632604 TGGATTTTGTGTAAACGAAGCCA 59.367 39.130 5.18 5.18 0.00 4.75
3180 3253 2.991250 TCAGAAAGCAAGGATGTAGCC 58.009 47.619 0.00 0.00 0.00 3.93
3263 3341 5.473039 GGCCATCACATGATAAATAAAGGC 58.527 41.667 0.00 8.06 34.69 4.35
3339 3420 3.706373 GGGGAGAGCGGTGAAGCA 61.706 66.667 0.00 0.00 40.15 3.91
3340 3421 3.706373 TGGGGAGAGCGGTGAAGC 61.706 66.667 0.00 0.00 37.41 3.86
3439 3527 0.393944 CATGCATCACAGGTCCTGCT 60.394 55.000 19.40 3.48 34.37 4.24
3452 3540 0.034574 TCGTAAACCAGGCCATGCAT 60.035 50.000 5.01 0.00 0.00 3.96
3471 3559 3.341629 CCATGTGTCCCCTGCCCT 61.342 66.667 0.00 0.00 0.00 5.19
3555 3644 7.046033 TCGAAGGAGTATTGTAGATTTTTCCC 58.954 38.462 0.00 0.00 0.00 3.97
3579 3668 5.634859 CCTTTGCAATTGATGTGTAAACCTC 59.365 40.000 10.34 0.00 0.00 3.85
3587 3676 4.084433 CGAAAACCCTTTGCAATTGATGTG 60.084 41.667 10.34 0.00 0.00 3.21
3609 3698 7.539710 CCAAAATCAATATAGTGATGCATTCCG 59.460 37.037 15.90 3.43 38.28 4.30
3648 3737 8.902540 TGATACTTTTCTAAAACTCTCTGCAA 57.097 30.769 0.00 0.00 0.00 4.08
3694 3786 9.514822 CACATGCTTAAAACATTTTACAATTCG 57.485 29.630 0.00 0.00 32.77 3.34
3703 3795 9.545105 TCTGATTTTCACATGCTTAAAACATTT 57.455 25.926 0.00 0.00 0.00 2.32
3704 3796 9.199982 CTCTGATTTTCACATGCTTAAAACATT 57.800 29.630 0.00 0.00 0.00 2.71
3713 3808 3.682696 TGAGCTCTGATTTTCACATGCT 58.317 40.909 16.19 0.00 32.80 3.79
3780 3876 6.534079 GTGCACGAGTCCTTTTTAGTATACAT 59.466 38.462 0.00 0.00 0.00 2.29
3820 3916 6.741992 TTGGCAACTGATCATAAACAGTAG 57.258 37.500 0.00 0.00 44.94 2.57
3867 3964 7.778382 ACCAAGGAACATACTTAGTTTTGAAGT 59.222 33.333 0.00 0.00 40.27 3.01
3960 4057 4.952460 TGTCACAGAAACAGGGTAAGTAC 58.048 43.478 0.00 0.00 0.00 2.73
4069 4185 4.592485 ACTCGACAACAAGACAATCTCT 57.408 40.909 0.00 0.00 0.00 3.10
4156 4279 9.573133 GAACTGCTTAATTTAAATGCATACAGT 57.427 29.630 10.95 12.58 35.15 3.55
4160 4283 7.990917 TCGGAACTGCTTAATTTAAATGCATA 58.009 30.769 10.95 0.00 33.02 3.14
4330 4453 2.412591 TGATTCAGATCCCCTCCTTCC 58.587 52.381 0.00 0.00 0.00 3.46
4346 4469 4.207891 AGCACCATTACGACTCTTGATT 57.792 40.909 0.00 0.00 0.00 2.57
4355 4478 2.290008 ACCATCACAAGCACCATTACGA 60.290 45.455 0.00 0.00 0.00 3.43
4376 4499 2.957871 CGCGCAAGTGCTAGACATA 58.042 52.632 8.75 0.00 43.07 2.29
4427 4550 3.560105 GGGCATAGAAGAGCAAAAGGAT 58.440 45.455 0.00 0.00 0.00 3.24
4490 4614 3.713764 AGGATTACATCTCTTGGGGTCTG 59.286 47.826 0.00 0.00 0.00 3.51
4582 4710 2.430694 TGTATCACCATCAAGCTAGCGT 59.569 45.455 9.55 2.32 0.00 5.07
4583 4711 3.097877 TGTATCACCATCAAGCTAGCG 57.902 47.619 9.55 0.00 0.00 4.26
4656 4784 3.981211 TGCAAGAAACTCATTTCCTTGC 58.019 40.909 15.83 15.83 46.10 4.01
4698 4826 5.008118 GCACCATATTCTGCTAGGTTTCTTC 59.992 44.000 0.00 0.00 0.00 2.87
4706 4834 4.202441 ACTTTGGCACCATATTCTGCTAG 58.798 43.478 0.00 0.00 33.63 3.42
4754 4882 9.023962 TGATAATTTTCAGCAAACCTTGATAGT 57.976 29.630 0.00 0.00 0.00 2.12
4768 4896 9.132521 CCTACAAAGCAAGTTGATAATTTTCAG 57.867 33.333 7.16 1.87 32.59 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.