Multiple sequence alignment - TraesCS3A01G400300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G400300 chr3A 100.000 3361 0 0 1 3361 647021642 647025002 0.000000e+00 6207.0
1 TraesCS3A01G400300 chr3A 89.348 460 42 4 1758 2213 647135841 647136297 3.760000e-159 571.0
2 TraesCS3A01G400300 chr3A 88.584 219 23 2 1 218 646861467 646861684 7.150000e-67 265.0
3 TraesCS3A01G400300 chr3A 85.185 162 9 7 3215 3361 475469024 475468863 5.810000e-33 152.0
4 TraesCS3A01G400300 chr3A 92.222 90 7 0 211 300 646982104 646982193 9.790000e-26 128.0
5 TraesCS3A01G400300 chr3A 79.000 200 25 11 2566 2753 222442597 222442791 1.640000e-23 121.0
6 TraesCS3A01G400300 chr3B 87.297 2283 178 52 1 2213 672108562 672110802 0.000000e+00 2507.0
7 TraesCS3A01G400300 chr3B 87.761 1487 106 30 530 1999 723492670 723494097 0.000000e+00 1668.0
8 TraesCS3A01G400300 chr3B 83.333 414 35 20 2006 2414 723494526 723494910 5.340000e-93 351.0
9 TraesCS3A01G400300 chr3B 82.716 162 13 1 3215 3361 670548937 670549098 2.720000e-26 130.0
10 TraesCS3A01G400300 chr3D 89.341 516 49 3 1692 2204 509309195 509309707 0.000000e+00 643.0
11 TraesCS3A01G400300 chr3D 91.667 48 4 0 2705 2752 542952576 542952529 2.160000e-07 67.6
12 TraesCS3A01G400300 chr1A 84.932 438 49 13 2789 3214 364225352 364224920 8.620000e-116 427.0
13 TraesCS3A01G400300 chr1A 77.753 454 45 25 2772 3214 403020916 403021324 9.380000e-56 228.0
14 TraesCS3A01G400300 chr2A 76.224 715 119 27 2542 3214 822673 823378 6.950000e-87 331.0
15 TraesCS3A01G400300 chr2A 82.738 168 21 5 2542 2705 896535 896698 3.500000e-30 143.0
16 TraesCS3A01G400300 chr1B 79.692 389 31 21 2837 3214 647174754 647175105 1.560000e-58 237.0
17 TraesCS3A01G400300 chr1B 85.981 107 13 2 2524 2629 636034653 636034548 2.740000e-21 113.0
18 TraesCS3A01G400300 chr6B 78.348 351 45 17 2836 3167 648259182 648259520 7.360000e-47 198.0
19 TraesCS3A01G400300 chr6B 83.415 205 22 8 2538 2737 279280749 279280946 2.660000e-41 180.0
20 TraesCS3A01G400300 chr6B 84.049 163 8 4 3215 3361 299045904 299046064 1.260000e-29 141.0
21 TraesCS3A01G400300 chr6B 76.033 242 27 13 2544 2757 299045203 299045441 2.760000e-16 97.1
22 TraesCS3A01G400300 chr1D 83.010 206 13 12 2542 2737 427225953 427225760 2.070000e-37 167.0
23 TraesCS3A01G400300 chr1D 84.049 163 9 3 3215 3361 287170028 287170189 1.260000e-29 141.0
24 TraesCS3A01G400300 chr1D 77.108 249 39 7 2772 3012 287169603 287169841 9.790000e-26 128.0
25 TraesCS3A01G400300 chr7D 83.951 162 11 1 3215 3361 38997944 38998105 1.260000e-29 141.0
26 TraesCS3A01G400300 chr7D 84.483 116 8 3 2642 2747 329421046 329420931 4.590000e-19 106.0
27 TraesCS3A01G400300 chrUn 83.333 162 12 1 3215 3361 32435536 32435375 5.850000e-28 135.0
28 TraesCS3A01G400300 chrUn 83.916 143 19 3 2540 2682 43412727 43412865 2.100000e-27 134.0
29 TraesCS3A01G400300 chr4B 78.750 240 24 11 2538 2754 458318656 458318891 5.850000e-28 135.0
30 TraesCS3A01G400300 chr5B 90.909 99 7 1 3258 3356 489818632 489818728 7.570000e-27 132.0
31 TraesCS3A01G400300 chr5B 90.426 94 9 0 2536 2629 489813999 489814092 1.270000e-24 124.0
32 TraesCS3A01G400300 chr5B 79.532 171 17 9 2597 2754 541628364 541628529 4.590000e-19 106.0
33 TraesCS3A01G400300 chr2B 87.500 104 13 0 3258 3361 16222734 16222837 1.640000e-23 121.0
34 TraesCS3A01G400300 chr7A 81.481 162 15 1 3215 3361 291647005 291647166 5.890000e-23 119.0
35 TraesCS3A01G400300 chr6D 75.893 224 28 15 2537 2748 463986617 463986826 1.280000e-14 91.6
36 TraesCS3A01G400300 chr6D 95.652 46 2 0 3215 3260 207234320 207234365 1.290000e-09 75.0
37 TraesCS3A01G400300 chr4A 97.826 46 1 0 3215 3260 45384718 45384763 2.780000e-11 80.5
38 TraesCS3A01G400300 chr6A 91.667 48 4 0 2705 2752 584005875 584005828 2.160000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G400300 chr3A 647021642 647025002 3360 False 6207.0 6207 100.000 1 3361 1 chr3A.!!$F4 3360
1 TraesCS3A01G400300 chr3B 672108562 672110802 2240 False 2507.0 2507 87.297 1 2213 1 chr3B.!!$F2 2212
2 TraesCS3A01G400300 chr3B 723492670 723494910 2240 False 1009.5 1668 85.547 530 2414 2 chr3B.!!$F3 1884
3 TraesCS3A01G400300 chr3D 509309195 509309707 512 False 643.0 643 89.341 1692 2204 1 chr3D.!!$F1 512
4 TraesCS3A01G400300 chr2A 822673 823378 705 False 331.0 331 76.224 2542 3214 1 chr2A.!!$F1 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
279 281 0.109723 TCTTCCTTTCGGTTGTGGGG 59.890 55.0 0.0 0.0 0.0 4.96 F
287 289 0.466555 TCGGTTGTGGGGTTTTCTGG 60.467 55.0 0.0 0.0 0.0 3.86 F
1275 1343 0.682855 TCCCCAACAAATCATCGGCC 60.683 55.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2272 2768 0.722848 ACACACAACAAACGACGGAC 59.277 50.000 0.00 0.00 0.00 4.79 R
2278 2774 8.942669 ACAATTGTATATACACACAACAAACG 57.057 30.769 15.20 0.12 37.47 3.60 R
2592 3102 0.036306 GGGTCCCACTGTGAACGAAT 59.964 55.000 9.86 0.00 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.035102 GGCTCCTCAAACCGGCCT 62.035 66.667 0.00 0.00 39.68 5.19
35 36 1.826720 TCAAACCGGCCTTATACGTCT 59.173 47.619 0.00 0.00 0.00 4.18
36 37 1.931172 CAAACCGGCCTTATACGTCTG 59.069 52.381 0.00 0.00 0.00 3.51
39 40 1.300697 CGGCCTTATACGTCTGGGC 60.301 63.158 0.00 11.60 41.80 5.36
41 42 1.335145 GGCCTTATACGTCTGGGCTA 58.665 55.000 17.04 0.00 42.14 3.93
59 60 0.694783 TAACCGGCACCCCCATATCA 60.695 55.000 0.00 0.00 0.00 2.15
60 61 1.994885 AACCGGCACCCCCATATCAG 61.995 60.000 0.00 0.00 0.00 2.90
72 73 4.904251 CCCCCATATCAGGTCCATATCTAG 59.096 50.000 0.00 0.00 0.00 2.43
75 76 6.388814 CCCATATCAGGTCCATATCTAGGAT 58.611 44.000 0.00 0.00 37.52 3.24
77 78 6.269538 CCATATCAGGTCCATATCTAGGATGG 59.730 46.154 15.09 15.09 44.59 3.51
90 91 1.376649 AGGATGGATATGGGAAGGCC 58.623 55.000 0.00 0.00 0.00 5.19
91 92 1.131937 AGGATGGATATGGGAAGGCCT 60.132 52.381 0.00 0.00 0.00 5.19
93 94 1.707427 GATGGATATGGGAAGGCCTGT 59.293 52.381 5.69 0.00 0.00 4.00
123 125 1.303091 GCACGTTTGCCTACCGGATT 61.303 55.000 9.46 0.00 43.66 3.01
130 132 4.642429 GTTTGCCTACCGGATTGATAGAT 58.358 43.478 9.46 0.00 0.00 1.98
162 164 3.055891 CACAAATTCCACCAAATCCCTCC 60.056 47.826 0.00 0.00 0.00 4.30
164 166 1.295020 ATTCCACCAAATCCCTCCGA 58.705 50.000 0.00 0.00 0.00 4.55
190 192 1.405661 CCGGACTAGCACTTTTCCTCC 60.406 57.143 0.00 0.00 0.00 4.30
196 198 0.988063 AGCACTTTTCCTCCCCTCTC 59.012 55.000 0.00 0.00 0.00 3.20
209 211 3.173965 TCCCCTCTCTTCTCATTCGTTT 58.826 45.455 0.00 0.00 0.00 3.60
249 251 3.258228 CGGTTTTGTGAAGCTTTTGGTT 58.742 40.909 0.00 0.00 43.55 3.67
279 281 0.109723 TCTTCCTTTCGGTTGTGGGG 59.890 55.000 0.00 0.00 0.00 4.96
284 286 1.067974 CCTTTCGGTTGTGGGGTTTTC 59.932 52.381 0.00 0.00 0.00 2.29
285 287 2.028876 CTTTCGGTTGTGGGGTTTTCT 58.971 47.619 0.00 0.00 0.00 2.52
287 289 0.466555 TCGGTTGTGGGGTTTTCTGG 60.467 55.000 0.00 0.00 0.00 3.86
300 302 4.430007 GGTTTTCTGGACCAGTTTTTGTC 58.570 43.478 21.06 6.76 37.14 3.18
302 304 5.358725 GGTTTTCTGGACCAGTTTTTGTCTA 59.641 40.000 21.06 0.00 37.14 2.59
303 305 6.459710 GGTTTTCTGGACCAGTTTTTGTCTAG 60.460 42.308 21.06 0.00 40.32 2.43
306 309 6.488769 TCTGGACCAGTTTTTGTCTAGTTA 57.511 37.500 21.06 0.00 40.01 2.24
308 311 7.514721 TCTGGACCAGTTTTTGTCTAGTTATT 58.485 34.615 21.06 0.00 40.01 1.40
311 314 8.973182 TGGACCAGTTTTTGTCTAGTTATTTTT 58.027 29.630 0.00 0.00 0.00 1.94
378 407 9.587772 TTTTGAAATCTATTTTCCAAAACGTGA 57.412 25.926 9.32 0.00 42.63 4.35
380 409 9.757227 TTGAAATCTATTTTCCAAAACGTGATT 57.243 25.926 0.00 0.00 42.63 2.57
410 458 6.166279 GGTCAGATTTTGAATTTCTTTCCCC 58.834 40.000 0.00 0.00 37.61 4.81
418 466 8.601047 TTTTGAATTTCTTTCCCCCAAAATTT 57.399 26.923 0.00 0.00 32.90 1.82
425 473 4.719273 TCTTTCCCCCAAAATTTGTGAACT 59.281 37.500 4.92 0.00 0.00 3.01
427 475 5.443230 TTCCCCCAAAATTTGTGAACTTT 57.557 34.783 4.92 0.00 0.00 2.66
428 476 5.029807 TCCCCCAAAATTTGTGAACTTTC 57.970 39.130 4.92 0.00 0.00 2.62
429 477 4.133820 CCCCCAAAATTTGTGAACTTTCC 58.866 43.478 4.92 0.00 0.00 3.13
430 478 4.133820 CCCCAAAATTTGTGAACTTTCCC 58.866 43.478 4.92 0.00 0.00 3.97
431 479 4.384647 CCCCAAAATTTGTGAACTTTCCCA 60.385 41.667 4.92 0.00 0.00 4.37
448 496 6.939730 ACTTTCCCAAATGTTTGTGAACTTTT 59.060 30.769 3.42 0.00 41.23 2.27
455 503 9.623350 CCAAATGTTTGTGAACTTTTTCATTTT 57.377 25.926 4.92 0.00 43.72 1.82
513 561 9.527157 TTTATTTTTATGACCTCCTCACATTCA 57.473 29.630 0.00 0.00 0.00 2.57
514 562 6.817765 TTTTTATGACCTCCTCACATTCAC 57.182 37.500 0.00 0.00 0.00 3.18
625 678 5.838531 ACCCGTGAAGTGTTTTTAAATCA 57.161 34.783 0.00 0.00 0.00 2.57
667 720 6.317088 TCGCAAACAATTTTTGAATTTTGCA 58.683 28.000 18.55 0.00 44.05 4.08
727 780 5.855740 TGGTCGTTTTTCAAAACCCTATT 57.144 34.783 9.12 0.00 44.05 1.73
728 781 6.223351 TGGTCGTTTTTCAAAACCCTATTT 57.777 33.333 9.12 0.00 44.05 1.40
756 809 8.641499 ATTTGCAAATTCGTGACTCTTAAAAA 57.359 26.923 18.99 0.00 0.00 1.94
758 811 8.641499 TTGCAAATTCGTGACTCTTAAAAATT 57.359 26.923 0.00 0.00 0.00 1.82
761 814 7.148804 GCAAATTCGTGACTCTTAAAAATTCCC 60.149 37.037 0.00 0.00 0.00 3.97
763 816 6.554334 TTCGTGACTCTTAAAAATTCCCAG 57.446 37.500 0.00 0.00 0.00 4.45
805 860 4.327680 GTGTATTTCTCCAGAAACCAGCT 58.672 43.478 3.84 0.00 45.55 4.24
824 879 2.202703 CTACCTGGTGTACGCGCC 60.203 66.667 10.23 0.00 45.23 6.53
831 897 1.947642 GGTGTACGCGCCGAATAGG 60.948 63.158 5.73 0.00 44.97 2.57
896 962 2.743636 TCCTTAGCGGAGTTTGTGAG 57.256 50.000 0.00 0.00 36.69 3.51
1008 1076 2.617788 CGTGATCCATGGGAAGGTGAAA 60.618 50.000 13.02 0.00 34.34 2.69
1010 1078 3.831911 GTGATCCATGGGAAGGTGAAAAA 59.168 43.478 13.02 0.00 34.34 1.94
1048 1116 5.912955 GGGTAATAATCGCCAAAAAGATTCG 59.087 40.000 0.00 0.00 38.04 3.34
1052 1120 4.766404 AATCGCCAAAAAGATTCGTCTT 57.234 36.364 0.00 0.00 32.13 3.01
1065 1133 6.718454 AGATTCGTCTTTGAGATCAAACAG 57.282 37.500 3.91 0.00 40.55 3.16
1086 1154 4.595538 TGGTGAGCGCCGTCGTTT 62.596 61.111 2.29 0.00 38.14 3.60
1087 1155 3.774702 GGTGAGCGCCGTCGTTTC 61.775 66.667 2.29 0.00 38.14 2.78
1088 1156 4.117372 GTGAGCGCCGTCGTTTCG 62.117 66.667 2.29 0.00 38.14 3.46
1111 1179 0.807496 GAAATCAGCAGCAGACCCAC 59.193 55.000 0.00 0.00 0.00 4.61
1114 1182 3.957586 CAGCAGCAGACCCACCCA 61.958 66.667 0.00 0.00 0.00 4.51
1115 1183 3.644606 AGCAGCAGACCCACCCAG 61.645 66.667 0.00 0.00 0.00 4.45
1116 1184 3.958860 GCAGCAGACCCACCCAGT 61.959 66.667 0.00 0.00 0.00 4.00
1117 1185 2.348998 CAGCAGACCCACCCAGTC 59.651 66.667 0.00 0.00 34.31 3.51
1118 1186 3.314331 AGCAGACCCACCCAGTCG 61.314 66.667 0.00 0.00 39.31 4.18
1134 1202 1.342174 AGTCGTAACGAGGGCAAGAAA 59.658 47.619 0.00 0.00 36.23 2.52
1146 1214 2.676471 AAGAAAATGGCGGGCGCT 60.676 55.556 7.64 0.00 41.60 5.92
1194 1262 2.423446 GAGATCCGCGGCCTTGAT 59.577 61.111 23.51 8.42 0.00 2.57
1233 1301 1.000496 GAGGTCGACGTCAAAGGTCTT 60.000 52.381 28.31 0.00 31.33 3.01
1242 1310 3.072211 CGTCAAAGGTCTTTTCTACCCC 58.928 50.000 0.00 0.00 37.77 4.95
1245 1313 3.072211 CAAAGGTCTTTTCTACCCCGAC 58.928 50.000 0.00 0.00 37.77 4.79
1275 1343 0.682855 TCCCCAACAAATCATCGGCC 60.683 55.000 0.00 0.00 0.00 6.13
1290 1358 4.442454 GCCAGGGCCAGGGTTACC 62.442 72.222 17.62 0.00 34.56 2.85
1372 1440 2.256158 CGCGGTACAGGACGTCAA 59.744 61.111 18.91 0.00 0.00 3.18
1373 1441 2.084681 CGCGGTACAGGACGTCAAC 61.085 63.158 18.91 9.25 0.00 3.18
1596 1664 1.817099 GGCCTGCCTCGAGACATTG 60.817 63.158 15.71 3.94 0.00 2.82
1605 1673 2.597903 GAGACATTGCCCCTCCCC 59.402 66.667 0.00 0.00 0.00 4.81
2040 2533 5.951148 TGGAAAGTTTTGCATCTCATGGATA 59.049 36.000 0.00 0.00 33.44 2.59
2157 2653 3.139029 CCACAAGGTCCGCTTCTAC 57.861 57.895 0.00 0.00 0.00 2.59
2213 2709 7.024171 GCTCTTCAGCCTGACTTTTAAATTAC 58.976 38.462 0.00 0.00 40.14 1.89
2214 2710 7.308589 GCTCTTCAGCCTGACTTTTAAATTACA 60.309 37.037 0.00 0.00 40.14 2.41
2215 2711 8.458573 TCTTCAGCCTGACTTTTAAATTACAA 57.541 30.769 0.00 0.00 0.00 2.41
2216 2712 9.077885 TCTTCAGCCTGACTTTTAAATTACAAT 57.922 29.630 0.00 0.00 0.00 2.71
2217 2713 9.346725 CTTCAGCCTGACTTTTAAATTACAATC 57.653 33.333 0.00 0.00 0.00 2.67
2218 2714 8.402798 TCAGCCTGACTTTTAAATTACAATCA 57.597 30.769 0.00 0.00 0.00 2.57
2219 2715 8.296713 TCAGCCTGACTTTTAAATTACAATCAC 58.703 33.333 0.00 0.00 0.00 3.06
2237 2733 5.818136 ATCACATTAACAGGGAAATCGTG 57.182 39.130 0.00 0.00 37.29 4.35
2239 2735 3.190327 CACATTAACAGGGAAATCGTGCA 59.810 43.478 0.00 0.00 34.84 4.57
2240 2736 4.016444 ACATTAACAGGGAAATCGTGCAT 58.984 39.130 0.00 0.00 34.84 3.96
2241 2737 4.462483 ACATTAACAGGGAAATCGTGCATT 59.538 37.500 0.00 0.00 34.84 3.56
2242 2738 4.433186 TTAACAGGGAAATCGTGCATTG 57.567 40.909 0.00 0.00 34.84 2.82
2243 2739 2.198827 ACAGGGAAATCGTGCATTGA 57.801 45.000 0.00 0.00 34.84 2.57
2244 2740 1.812571 ACAGGGAAATCGTGCATTGAC 59.187 47.619 0.00 0.00 34.84 3.18
2245 2741 1.811965 CAGGGAAATCGTGCATTGACA 59.188 47.619 0.00 0.00 0.00 3.58
2246 2742 2.228582 CAGGGAAATCGTGCATTGACAA 59.771 45.455 0.00 0.00 0.00 3.18
2247 2743 2.489329 AGGGAAATCGTGCATTGACAAG 59.511 45.455 0.00 0.00 0.00 3.16
2248 2744 2.228822 GGGAAATCGTGCATTGACAAGT 59.771 45.455 0.00 0.00 0.00 3.16
2249 2745 3.438781 GGGAAATCGTGCATTGACAAGTA 59.561 43.478 0.00 0.00 0.00 2.24
2250 2746 4.437390 GGGAAATCGTGCATTGACAAGTAG 60.437 45.833 0.00 0.00 0.00 2.57
2251 2747 4.437390 GGAAATCGTGCATTGACAAGTAGG 60.437 45.833 0.00 0.00 0.00 3.18
2252 2748 1.438651 TCGTGCATTGACAAGTAGGC 58.561 50.000 0.00 0.00 0.00 3.93
2253 2749 1.001974 TCGTGCATTGACAAGTAGGCT 59.998 47.619 0.00 0.00 0.00 4.58
2254 2750 1.129251 CGTGCATTGACAAGTAGGCTG 59.871 52.381 0.00 0.00 0.00 4.85
2255 2751 1.470098 GTGCATTGACAAGTAGGCTGG 59.530 52.381 0.00 0.00 0.00 4.85
2256 2752 1.350684 TGCATTGACAAGTAGGCTGGA 59.649 47.619 0.00 0.00 0.00 3.86
2257 2753 2.224744 TGCATTGACAAGTAGGCTGGAA 60.225 45.455 0.00 0.00 0.00 3.53
2258 2754 2.819608 GCATTGACAAGTAGGCTGGAAA 59.180 45.455 0.00 0.00 0.00 3.13
2259 2755 3.445096 GCATTGACAAGTAGGCTGGAAAT 59.555 43.478 0.00 0.00 0.00 2.17
2260 2756 4.082026 GCATTGACAAGTAGGCTGGAAATT 60.082 41.667 0.00 0.00 0.00 1.82
2261 2757 5.644644 CATTGACAAGTAGGCTGGAAATTC 58.355 41.667 0.00 0.00 0.00 2.17
2262 2758 3.334691 TGACAAGTAGGCTGGAAATTCG 58.665 45.455 0.00 0.00 0.00 3.34
2263 2759 3.244422 TGACAAGTAGGCTGGAAATTCGT 60.244 43.478 0.00 0.00 0.00 3.85
2264 2760 3.335579 ACAAGTAGGCTGGAAATTCGTC 58.664 45.455 0.00 0.00 0.00 4.20
2265 2761 2.678336 CAAGTAGGCTGGAAATTCGTCC 59.322 50.000 0.00 0.00 38.27 4.79
2266 2762 2.188817 AGTAGGCTGGAAATTCGTCCT 58.811 47.619 0.00 5.07 38.62 3.85
2272 2768 5.368989 AGGCTGGAAATTCGTCCTTATTAG 58.631 41.667 0.00 0.00 38.62 1.73
2278 2774 5.461407 GGAAATTCGTCCTTATTAGTCCGTC 59.539 44.000 0.00 0.00 34.56 4.79
2279 2775 3.680642 TTCGTCCTTATTAGTCCGTCG 57.319 47.619 0.00 0.00 0.00 5.12
2292 2788 1.925847 GTCCGTCGTTTGTTGTGTGTA 59.074 47.619 0.00 0.00 0.00 2.90
2334 2844 6.276832 TCTACTCGTAGTAGTTTGGCAATT 57.723 37.500 16.50 0.00 46.31 2.32
2342 2852 6.293190 CGTAGTAGTTTGGCAATTCACTGAAA 60.293 38.462 12.20 0.00 0.00 2.69
2409 2919 7.414222 AGAATCCATGTAATTTTGCAGTCAT 57.586 32.000 0.00 0.00 0.00 3.06
2414 2924 8.121305 TCCATGTAATTTTGCAGTCATAGTTT 57.879 30.769 0.00 0.00 0.00 2.66
2415 2925 8.584157 TCCATGTAATTTTGCAGTCATAGTTTT 58.416 29.630 0.00 0.00 0.00 2.43
2416 2926 9.853555 CCATGTAATTTTGCAGTCATAGTTTTA 57.146 29.630 0.00 0.00 0.00 1.52
2425 2935 9.897744 TTTGCAGTCATAGTTTTATTCTTTGAG 57.102 29.630 0.00 0.00 0.00 3.02
2426 2936 8.621532 TGCAGTCATAGTTTTATTCTTTGAGT 57.378 30.769 0.00 0.00 30.70 3.41
2427 2937 9.066892 TGCAGTCATAGTTTTATTCTTTGAGTT 57.933 29.630 0.00 0.00 29.08 3.01
2466 2976 0.378610 GCTGTCGGCTTATTCCAAGC 59.621 55.000 0.00 0.31 42.30 4.01
2467 2977 0.652592 CTGTCGGCTTATTCCAAGCG 59.347 55.000 3.14 0.00 43.89 4.68
2468 2978 0.036765 TGTCGGCTTATTCCAAGCGT 60.037 50.000 3.14 0.00 43.89 5.07
2469 2979 1.205179 TGTCGGCTTATTCCAAGCGTA 59.795 47.619 3.14 0.00 43.89 4.42
2470 2980 2.273557 GTCGGCTTATTCCAAGCGTAA 58.726 47.619 3.14 0.00 43.89 3.18
2471 2981 2.870411 GTCGGCTTATTCCAAGCGTAAT 59.130 45.455 3.14 0.00 43.89 1.89
2472 2982 3.311596 GTCGGCTTATTCCAAGCGTAATT 59.688 43.478 3.14 0.00 43.89 1.40
2473 2983 3.942748 TCGGCTTATTCCAAGCGTAATTT 59.057 39.130 3.14 0.00 43.89 1.82
2474 2984 4.396790 TCGGCTTATTCCAAGCGTAATTTT 59.603 37.500 3.14 0.00 43.89 1.82
2475 2985 4.499040 CGGCTTATTCCAAGCGTAATTTTG 59.501 41.667 3.14 0.00 43.89 2.44
2476 2986 4.267690 GGCTTATTCCAAGCGTAATTTTGC 59.732 41.667 3.14 0.00 43.89 3.68
2477 2987 4.862018 GCTTATTCCAAGCGTAATTTTGCA 59.138 37.500 4.67 0.00 33.20 4.08
2478 2988 5.004726 GCTTATTCCAAGCGTAATTTTGCAG 59.995 40.000 4.67 0.00 33.20 4.41
2479 2989 4.519540 ATTCCAAGCGTAATTTTGCAGT 57.480 36.364 4.67 0.00 0.00 4.40
2480 2990 3.552604 TCCAAGCGTAATTTTGCAGTC 57.447 42.857 4.67 0.00 0.00 3.51
2481 2991 2.881513 TCCAAGCGTAATTTTGCAGTCA 59.118 40.909 4.67 0.00 0.00 3.41
2482 2992 3.505680 TCCAAGCGTAATTTTGCAGTCAT 59.494 39.130 4.67 0.00 0.00 3.06
2483 2993 4.697828 TCCAAGCGTAATTTTGCAGTCATA 59.302 37.500 4.67 0.00 0.00 2.15
2484 2994 5.030295 CCAAGCGTAATTTTGCAGTCATAG 58.970 41.667 4.67 0.00 0.00 2.23
2485 2995 5.391950 CCAAGCGTAATTTTGCAGTCATAGT 60.392 40.000 4.67 0.00 0.00 2.12
2486 2996 5.880054 AGCGTAATTTTGCAGTCATAGTT 57.120 34.783 4.67 0.00 0.00 2.24
2487 2997 5.631026 AGCGTAATTTTGCAGTCATAGTTG 58.369 37.500 4.67 0.00 0.00 3.16
2488 2998 5.411361 AGCGTAATTTTGCAGTCATAGTTGA 59.589 36.000 4.67 0.00 0.00 3.18
2489 2999 6.094048 AGCGTAATTTTGCAGTCATAGTTGAT 59.906 34.615 4.67 0.00 33.56 2.57
2490 3000 6.747280 GCGTAATTTTGCAGTCATAGTTGATT 59.253 34.615 0.00 0.00 33.56 2.57
2491 3001 7.253420 GCGTAATTTTGCAGTCATAGTTGATTG 60.253 37.037 0.00 0.00 41.25 2.67
2492 3002 7.962373 CGTAATTTTGCAGTCATAGTTGATTGA 59.038 33.333 3.06 0.00 40.91 2.57
2493 3003 9.793252 GTAATTTTGCAGTCATAGTTGATTGAT 57.207 29.630 3.06 0.00 40.91 2.57
2496 3006 9.961265 ATTTTGCAGTCATAGTTGATTGATATG 57.039 29.630 3.06 0.00 40.91 1.78
2497 3007 8.510243 TTTGCAGTCATAGTTGATTGATATGT 57.490 30.769 3.06 0.00 40.91 2.29
2498 3008 9.612066 TTTGCAGTCATAGTTGATTGATATGTA 57.388 29.630 3.06 0.00 40.91 2.29
2499 3009 9.612066 TTGCAGTCATAGTTGATTGATATGTAA 57.388 29.630 3.06 0.00 40.91 2.41
2500 3010 9.045223 TGCAGTCATAGTTGATTGATATGTAAC 57.955 33.333 3.06 0.00 40.91 2.50
2501 3011 9.265901 GCAGTCATAGTTGATTGATATGTAACT 57.734 33.333 3.06 0.00 40.91 2.24
2521 3031 8.293867 TGTAACTTTTGTACACATATTTCCAGC 58.706 33.333 0.00 0.00 0.00 4.85
2522 3032 6.267496 ACTTTTGTACACATATTTCCAGCC 57.733 37.500 0.00 0.00 0.00 4.85
2523 3033 6.010219 ACTTTTGTACACATATTTCCAGCCT 58.990 36.000 0.00 0.00 0.00 4.58
2524 3034 7.172342 ACTTTTGTACACATATTTCCAGCCTA 58.828 34.615 0.00 0.00 0.00 3.93
2525 3035 7.336931 ACTTTTGTACACATATTTCCAGCCTAG 59.663 37.037 0.00 0.00 0.00 3.02
2526 3036 5.290493 TGTACACATATTTCCAGCCTAGG 57.710 43.478 3.67 3.67 0.00 3.02
2527 3037 4.719773 TGTACACATATTTCCAGCCTAGGT 59.280 41.667 11.31 0.00 0.00 3.08
2528 3038 5.900699 TGTACACATATTTCCAGCCTAGGTA 59.099 40.000 11.31 0.00 0.00 3.08
2529 3039 5.291905 ACACATATTTCCAGCCTAGGTAC 57.708 43.478 11.31 0.00 0.00 3.34
2530 3040 4.969359 ACACATATTTCCAGCCTAGGTACT 59.031 41.667 11.31 0.00 46.37 2.73
2531 3041 6.141083 ACACATATTTCCAGCCTAGGTACTA 58.859 40.000 11.31 0.00 41.75 1.82
2532 3042 6.614087 ACACATATTTCCAGCCTAGGTACTAA 59.386 38.462 11.31 0.00 42.17 2.24
2533 3043 7.292591 ACACATATTTCCAGCCTAGGTACTAAT 59.707 37.037 11.31 7.01 42.17 1.73
2534 3044 7.819900 CACATATTTCCAGCCTAGGTACTAATC 59.180 40.741 11.31 0.00 42.17 1.75
2535 3045 7.735321 ACATATTTCCAGCCTAGGTACTAATCT 59.265 37.037 11.31 0.00 42.17 2.40
2536 3046 8.598041 CATATTTCCAGCCTAGGTACTAATCTT 58.402 37.037 11.31 0.00 42.17 2.40
2537 3047 6.886178 TTTCCAGCCTAGGTACTAATCTTT 57.114 37.500 11.31 0.00 42.17 2.52
2538 3048 7.983166 TTTCCAGCCTAGGTACTAATCTTTA 57.017 36.000 11.31 0.00 42.17 1.85
2539 3049 8.562949 TTTCCAGCCTAGGTACTAATCTTTAT 57.437 34.615 11.31 0.00 42.17 1.40
2540 3050 7.778185 TCCAGCCTAGGTACTAATCTTTATC 57.222 40.000 11.31 0.00 42.17 1.75
2541 3051 7.536625 TCCAGCCTAGGTACTAATCTTTATCT 58.463 38.462 11.31 0.00 42.17 1.98
2542 3052 8.011290 TCCAGCCTAGGTACTAATCTTTATCTT 58.989 37.037 11.31 0.00 42.17 2.40
2543 3053 8.652290 CCAGCCTAGGTACTAATCTTTATCTTT 58.348 37.037 11.31 0.00 42.17 2.52
2629 3139 5.108517 GGACCCACATAATTTTCGTACGTA 58.891 41.667 16.05 1.99 0.00 3.57
2630 3140 5.005682 GGACCCACATAATTTTCGTACGTAC 59.994 44.000 15.90 15.90 0.00 3.67
2639 3149 2.100991 CGTACGTACGTCCCAGGC 59.899 66.667 33.95 8.35 44.13 4.85
2640 3150 2.689785 CGTACGTACGTCCCAGGCA 61.690 63.158 33.95 1.73 44.13 4.75
2644 3154 0.390735 ACGTACGTCCCAGGCATTTC 60.391 55.000 16.72 0.00 0.00 2.17
2647 3157 1.483415 GTACGTCCCAGGCATTTCCTA 59.517 52.381 0.00 0.00 45.52 2.94
2661 3171 1.425412 TTCCTAGTGCGAGCGTTTTC 58.575 50.000 0.00 0.00 0.00 2.29
2663 3173 0.716108 CCTAGTGCGAGCGTTTTCTG 59.284 55.000 0.00 0.00 0.00 3.02
2676 3186 2.159627 CGTTTTCTGGTTCTCCCGATTG 59.840 50.000 0.00 0.00 35.15 2.67
2677 3187 2.488153 GTTTTCTGGTTCTCCCGATTGG 59.512 50.000 0.00 0.00 35.15 3.16
2678 3188 1.358152 TTCTGGTTCTCCCGATTGGT 58.642 50.000 0.00 0.00 35.15 3.67
2708 3222 2.420628 AAACACATGACGCACAATGG 57.579 45.000 0.00 0.00 0.00 3.16
2709 3223 0.597568 AACACATGACGCACAATGGG 59.402 50.000 0.00 0.00 36.28 4.00
2710 3224 1.153978 CACATGACGCACAATGGGC 60.154 57.895 0.00 0.00 33.10 5.36
2711 3225 2.342650 ACATGACGCACAATGGGCC 61.343 57.895 0.22 0.00 33.10 5.80
2727 3292 2.502093 CCGGCCCATTAGCGTACA 59.498 61.111 0.00 0.00 0.00 2.90
2732 3297 1.813786 GGCCCATTAGCGTACAAACAA 59.186 47.619 0.00 0.00 0.00 2.83
2737 3302 2.237393 TTAGCGTACAAACAACCCGT 57.763 45.000 0.00 0.00 0.00 5.28
2738 3303 3.377346 TTAGCGTACAAACAACCCGTA 57.623 42.857 0.00 0.00 0.00 4.02
2748 3313 4.336153 ACAAACAACCCGTACCAGTAAAAG 59.664 41.667 0.00 0.00 0.00 2.27
2749 3314 4.420522 AACAACCCGTACCAGTAAAAGA 57.579 40.909 0.00 0.00 0.00 2.52
2750 3315 4.420522 ACAACCCGTACCAGTAAAAGAA 57.579 40.909 0.00 0.00 0.00 2.52
2751 3316 4.976864 ACAACCCGTACCAGTAAAAGAAT 58.023 39.130 0.00 0.00 0.00 2.40
2752 3317 5.379187 ACAACCCGTACCAGTAAAAGAATT 58.621 37.500 0.00 0.00 0.00 2.17
2753 3318 5.829391 ACAACCCGTACCAGTAAAAGAATTT 59.171 36.000 0.00 0.00 42.41 1.82
2805 3370 9.965824 AAAATTCGAGAAAAAGTATTGTGATGT 57.034 25.926 0.00 0.00 0.00 3.06
2806 3371 8.955061 AATTCGAGAAAAAGTATTGTGATGTG 57.045 30.769 0.00 0.00 0.00 3.21
2809 3374 7.151976 TCGAGAAAAAGTATTGTGATGTGAGA 58.848 34.615 0.00 0.00 0.00 3.27
2818 3383 5.551760 ATTGTGATGTGAGAAATCGAACC 57.448 39.130 0.00 0.00 0.00 3.62
2819 3384 4.001618 TGTGATGTGAGAAATCGAACCA 57.998 40.909 0.00 0.00 0.00 3.67
2821 3386 4.452114 TGTGATGTGAGAAATCGAACCAAG 59.548 41.667 0.00 0.00 0.00 3.61
2822 3387 3.436704 TGATGTGAGAAATCGAACCAAGC 59.563 43.478 0.00 0.00 0.00 4.01
2824 3389 2.151202 GTGAGAAATCGAACCAAGCCA 58.849 47.619 0.00 0.00 0.00 4.75
2825 3390 2.552315 GTGAGAAATCGAACCAAGCCAA 59.448 45.455 0.00 0.00 0.00 4.52
2830 3395 2.198827 ATCGAACCAAGCCAATCACA 57.801 45.000 0.00 0.00 0.00 3.58
2832 3397 1.202758 TCGAACCAAGCCAATCACACT 60.203 47.619 0.00 0.00 0.00 3.55
2833 3398 1.197721 CGAACCAAGCCAATCACACTC 59.802 52.381 0.00 0.00 0.00 3.51
2834 3399 2.229792 GAACCAAGCCAATCACACTCA 58.770 47.619 0.00 0.00 0.00 3.41
2838 3403 1.610038 CAAGCCAATCACACTCAAGCA 59.390 47.619 0.00 0.00 0.00 3.91
2839 3404 1.242076 AGCCAATCACACTCAAGCAC 58.758 50.000 0.00 0.00 0.00 4.40
2843 3408 2.880268 CCAATCACACTCAAGCACTCAA 59.120 45.455 0.00 0.00 0.00 3.02
2845 3410 4.022589 CCAATCACACTCAAGCACTCAAAT 60.023 41.667 0.00 0.00 0.00 2.32
2846 3411 4.761235 ATCACACTCAAGCACTCAAATG 57.239 40.909 0.00 0.00 0.00 2.32
2847 3412 2.291465 TCACACTCAAGCACTCAAATGC 59.709 45.455 0.00 0.00 46.50 3.56
2859 3425 4.093556 GCACTCAAATGCTAACCACTAGAC 59.906 45.833 0.00 0.00 42.62 2.59
2866 3432 8.100791 TCAAATGCTAACCACTAGACTAAACAT 58.899 33.333 0.00 0.00 0.00 2.71
2868 3434 6.599356 TGCTAACCACTAGACTAAACATGA 57.401 37.500 0.00 0.00 0.00 3.07
2869 3435 6.395629 TGCTAACCACTAGACTAAACATGAC 58.604 40.000 0.00 0.00 0.00 3.06
2871 3437 7.395206 TGCTAACCACTAGACTAAACATGACTA 59.605 37.037 0.00 0.00 0.00 2.59
2872 3438 7.916450 GCTAACCACTAGACTAAACATGACTAG 59.084 40.741 0.00 1.88 36.43 2.57
2881 3447 8.828688 AGACTAAACATGACTAGGTGTTTAAC 57.171 34.615 20.79 18.14 45.09 2.01
2887 3453 6.164176 ACATGACTAGGTGTTTAACTAGCAC 58.836 40.000 0.00 0.00 40.19 4.40
2920 3486 3.668596 AATTAAGTACACAATCGCGCC 57.331 42.857 0.00 0.00 0.00 6.53
2922 3488 1.635844 TAAGTACACAATCGCGCCAG 58.364 50.000 0.00 0.00 0.00 4.85
2935 3501 0.747255 GCGCCAGATACTGAGAGGAA 59.253 55.000 0.00 0.00 32.44 3.36
3111 3688 7.671827 TGACGTATTGTTGTGATTATTTCTCG 58.328 34.615 0.00 0.00 0.00 4.04
3114 3691 8.879759 ACGTATTGTTGTGATTATTTCTCGAAT 58.120 29.630 0.00 0.00 0.00 3.34
3122 3699 8.226543 TGTGATTATTTCTCGAATTTGCAAAC 57.773 30.769 15.41 1.46 0.00 2.93
3124 3701 8.863049 GTGATTATTTCTCGAATTTGCAAACAT 58.137 29.630 15.41 6.51 0.00 2.71
3214 3795 9.592196 TTTTCTAAAACTAGGAGGTACTGTAGA 57.408 33.333 0.00 0.00 41.55 2.59
3215 3796 8.572855 TTCTAAAACTAGGAGGTACTGTAGAC 57.427 38.462 0.00 0.00 41.55 2.59
3216 3797 7.926705 TCTAAAACTAGGAGGTACTGTAGACT 58.073 38.462 0.00 0.00 41.55 3.24
3217 3798 8.389366 TCTAAAACTAGGAGGTACTGTAGACTT 58.611 37.037 0.00 0.00 41.55 3.01
3218 3799 6.837471 AAACTAGGAGGTACTGTAGACTTG 57.163 41.667 0.00 0.00 41.55 3.16
3219 3800 4.857679 ACTAGGAGGTACTGTAGACTTGG 58.142 47.826 0.00 0.00 41.55 3.61
3220 3801 2.458620 AGGAGGTACTGTAGACTTGGC 58.541 52.381 0.00 0.00 41.55 4.52
3221 3802 1.134560 GGAGGTACTGTAGACTTGGCG 59.865 57.143 0.00 0.00 41.55 5.69
3222 3803 2.089980 GAGGTACTGTAGACTTGGCGA 58.910 52.381 0.00 0.00 41.55 5.54
3223 3804 2.490903 GAGGTACTGTAGACTTGGCGAA 59.509 50.000 0.00 0.00 41.55 4.70
3224 3805 3.097614 AGGTACTGTAGACTTGGCGAAT 58.902 45.455 0.00 0.00 37.18 3.34
3225 3806 3.514309 AGGTACTGTAGACTTGGCGAATT 59.486 43.478 0.00 0.00 37.18 2.17
3226 3807 4.020485 AGGTACTGTAGACTTGGCGAATTT 60.020 41.667 0.00 0.00 37.18 1.82
3227 3808 4.694037 GGTACTGTAGACTTGGCGAATTTT 59.306 41.667 0.00 0.00 0.00 1.82
3228 3809 5.180680 GGTACTGTAGACTTGGCGAATTTTT 59.819 40.000 0.00 0.00 0.00 1.94
3229 3810 5.108385 ACTGTAGACTTGGCGAATTTTTG 57.892 39.130 0.00 0.00 0.00 2.44
3230 3811 4.819630 ACTGTAGACTTGGCGAATTTTTGA 59.180 37.500 0.00 0.00 0.00 2.69
3231 3812 5.298276 ACTGTAGACTTGGCGAATTTTTGAA 59.702 36.000 0.00 0.00 0.00 2.69
3232 3813 6.137794 TGTAGACTTGGCGAATTTTTGAAA 57.862 33.333 0.00 0.00 0.00 2.69
3233 3814 6.744112 TGTAGACTTGGCGAATTTTTGAAAT 58.256 32.000 0.00 0.00 0.00 2.17
3234 3815 7.877003 TGTAGACTTGGCGAATTTTTGAAATA 58.123 30.769 0.00 0.00 0.00 1.40
3235 3816 8.519526 TGTAGACTTGGCGAATTTTTGAAATAT 58.480 29.630 0.00 0.00 0.00 1.28
3236 3817 7.816945 AGACTTGGCGAATTTTTGAAATATG 57.183 32.000 0.00 0.00 0.00 1.78
3237 3818 6.311200 AGACTTGGCGAATTTTTGAAATATGC 59.689 34.615 0.00 0.00 0.00 3.14
3238 3819 5.351189 ACTTGGCGAATTTTTGAAATATGCC 59.649 36.000 15.99 15.99 40.33 4.40
3239 3820 4.187694 TGGCGAATTTTTGAAATATGCCC 58.812 39.130 18.30 6.13 39.19 5.36
3240 3821 4.187694 GGCGAATTTTTGAAATATGCCCA 58.812 39.130 13.57 0.00 33.95 5.36
3241 3822 4.033932 GGCGAATTTTTGAAATATGCCCAC 59.966 41.667 13.57 0.00 33.95 4.61
3242 3823 4.629200 GCGAATTTTTGAAATATGCCCACA 59.371 37.500 0.00 0.00 0.00 4.17
3243 3824 5.294060 GCGAATTTTTGAAATATGCCCACAT 59.706 36.000 0.00 0.00 40.49 3.21
3244 3825 6.707711 CGAATTTTTGAAATATGCCCACATG 58.292 36.000 0.00 0.00 37.04 3.21
3245 3826 6.534436 CGAATTTTTGAAATATGCCCACATGA 59.466 34.615 0.00 0.00 37.04 3.07
3246 3827 7.225145 CGAATTTTTGAAATATGCCCACATGAT 59.775 33.333 0.00 0.00 37.04 2.45
3247 3828 7.795482 ATTTTTGAAATATGCCCACATGATG 57.205 32.000 0.00 0.00 37.04 3.07
3248 3829 4.325028 TTGAAATATGCCCACATGATGC 57.675 40.909 0.00 0.00 37.04 3.91
3249 3830 3.568443 TGAAATATGCCCACATGATGCT 58.432 40.909 0.00 0.00 37.04 3.79
3250 3831 3.962063 TGAAATATGCCCACATGATGCTT 59.038 39.130 0.00 0.00 37.04 3.91
3251 3832 4.406326 TGAAATATGCCCACATGATGCTTT 59.594 37.500 0.00 0.00 37.04 3.51
3252 3833 4.330944 AATATGCCCACATGATGCTTTG 57.669 40.909 0.00 0.00 37.04 2.77
3253 3834 1.563924 ATGCCCACATGATGCTTTGT 58.436 45.000 0.00 0.00 34.35 2.83
3254 3835 1.340088 TGCCCACATGATGCTTTGTT 58.660 45.000 0.00 0.00 0.00 2.83
3255 3836 1.693062 TGCCCACATGATGCTTTGTTT 59.307 42.857 0.00 0.00 0.00 2.83
3256 3837 2.104451 TGCCCACATGATGCTTTGTTTT 59.896 40.909 0.00 0.00 0.00 2.43
3257 3838 3.323115 TGCCCACATGATGCTTTGTTTTA 59.677 39.130 0.00 0.00 0.00 1.52
3258 3839 3.679502 GCCCACATGATGCTTTGTTTTAC 59.320 43.478 0.00 0.00 0.00 2.01
3259 3840 4.561326 GCCCACATGATGCTTTGTTTTACT 60.561 41.667 0.00 0.00 0.00 2.24
3260 3841 5.336372 GCCCACATGATGCTTTGTTTTACTA 60.336 40.000 0.00 0.00 0.00 1.82
3261 3842 6.324819 CCCACATGATGCTTTGTTTTACTAG 58.675 40.000 0.00 0.00 0.00 2.57
3262 3843 6.324819 CCACATGATGCTTTGTTTTACTAGG 58.675 40.000 0.00 0.00 0.00 3.02
3263 3844 6.324819 CACATGATGCTTTGTTTTACTAGGG 58.675 40.000 0.00 0.00 0.00 3.53
3264 3845 6.150976 CACATGATGCTTTGTTTTACTAGGGA 59.849 38.462 0.00 0.00 0.00 4.20
3265 3846 6.891908 ACATGATGCTTTGTTTTACTAGGGAT 59.108 34.615 0.00 0.00 0.00 3.85
3266 3847 8.052748 ACATGATGCTTTGTTTTACTAGGGATA 58.947 33.333 0.00 0.00 0.00 2.59
3267 3848 9.071276 CATGATGCTTTGTTTTACTAGGGATAT 57.929 33.333 0.00 0.00 0.00 1.63
3268 3849 8.450578 TGATGCTTTGTTTTACTAGGGATATG 57.549 34.615 0.00 0.00 0.00 1.78
3269 3850 7.502226 TGATGCTTTGTTTTACTAGGGATATGG 59.498 37.037 0.00 0.00 0.00 2.74
3270 3851 6.964464 TGCTTTGTTTTACTAGGGATATGGA 58.036 36.000 0.00 0.00 0.00 3.41
3271 3852 7.406916 TGCTTTGTTTTACTAGGGATATGGAA 58.593 34.615 0.00 0.00 0.00 3.53
3272 3853 7.556275 TGCTTTGTTTTACTAGGGATATGGAAG 59.444 37.037 0.00 0.00 0.00 3.46
3273 3854 7.013369 GCTTTGTTTTACTAGGGATATGGAAGG 59.987 40.741 0.00 0.00 0.00 3.46
3274 3855 7.758820 TTGTTTTACTAGGGATATGGAAGGA 57.241 36.000 0.00 0.00 0.00 3.36
3275 3856 7.758820 TGTTTTACTAGGGATATGGAAGGAA 57.241 36.000 0.00 0.00 0.00 3.36
3276 3857 8.344939 TGTTTTACTAGGGATATGGAAGGAAT 57.655 34.615 0.00 0.00 0.00 3.01
3277 3858 8.437575 TGTTTTACTAGGGATATGGAAGGAATC 58.562 37.037 0.00 0.00 0.00 2.52
3278 3859 8.661345 GTTTTACTAGGGATATGGAAGGAATCT 58.339 37.037 0.00 0.00 0.00 2.40
3279 3860 8.814448 TTTACTAGGGATATGGAAGGAATCTT 57.186 34.615 0.00 0.00 35.62 2.40
3280 3861 8.814448 TTACTAGGGATATGGAAGGAATCTTT 57.186 34.615 0.00 0.00 32.52 2.52
3281 3862 7.323052 ACTAGGGATATGGAAGGAATCTTTC 57.677 40.000 0.00 0.00 32.52 2.62
3282 3863 7.085601 ACTAGGGATATGGAAGGAATCTTTCT 58.914 38.462 5.11 0.00 32.52 2.52
3283 3864 6.446909 AGGGATATGGAAGGAATCTTTCTC 57.553 41.667 5.11 0.00 32.52 2.87
3284 3865 6.156812 AGGGATATGGAAGGAATCTTTCTCT 58.843 40.000 5.11 0.00 32.52 3.10
3285 3866 6.272090 AGGGATATGGAAGGAATCTTTCTCTC 59.728 42.308 5.11 0.00 32.52 3.20
3286 3867 6.272090 GGGATATGGAAGGAATCTTTCTCTCT 59.728 42.308 5.11 0.00 32.52 3.10
3287 3868 7.386059 GGATATGGAAGGAATCTTTCTCTCTC 58.614 42.308 5.11 0.00 32.52 3.20
3288 3869 4.727507 TGGAAGGAATCTTTCTCTCTCG 57.272 45.455 5.11 0.00 32.52 4.04
3289 3870 3.118956 TGGAAGGAATCTTTCTCTCTCGC 60.119 47.826 5.11 0.00 32.52 5.03
3290 3871 2.861462 AGGAATCTTTCTCTCTCGCG 57.139 50.000 0.00 0.00 0.00 5.87
3291 3872 1.202359 AGGAATCTTTCTCTCTCGCGC 60.202 52.381 0.00 0.00 0.00 6.86
3292 3873 0.843242 GAATCTTTCTCTCTCGCGCG 59.157 55.000 26.76 26.76 0.00 6.86
3293 3874 0.171455 AATCTTTCTCTCTCGCGCGT 59.829 50.000 30.98 1.78 0.00 6.01
3294 3875 0.248296 ATCTTTCTCTCTCGCGCGTC 60.248 55.000 30.98 0.00 0.00 5.19
3295 3876 1.135731 CTTTCTCTCTCGCGCGTCT 59.864 57.895 30.98 0.00 0.00 4.18
3296 3877 0.455295 CTTTCTCTCTCGCGCGTCTT 60.455 55.000 30.98 0.00 0.00 3.01
3297 3878 0.454620 TTTCTCTCTCGCGCGTCTTC 60.455 55.000 30.98 0.00 0.00 2.87
3298 3879 1.574702 TTCTCTCTCGCGCGTCTTCA 61.575 55.000 30.98 9.10 0.00 3.02
3299 3880 1.865622 CTCTCTCGCGCGTCTTCAC 60.866 63.158 30.98 0.00 0.00 3.18
3311 3892 3.700130 CGTCTTCACGTACAACCATTC 57.300 47.619 0.00 0.00 41.42 2.67
3312 3893 3.314553 CGTCTTCACGTACAACCATTCT 58.685 45.455 0.00 0.00 41.42 2.40
3313 3894 3.364023 CGTCTTCACGTACAACCATTCTC 59.636 47.826 0.00 0.00 41.42 2.87
3314 3895 4.304110 GTCTTCACGTACAACCATTCTCA 58.696 43.478 0.00 0.00 0.00 3.27
3315 3896 4.150098 GTCTTCACGTACAACCATTCTCAC 59.850 45.833 0.00 0.00 0.00 3.51
3316 3897 4.038763 TCTTCACGTACAACCATTCTCACT 59.961 41.667 0.00 0.00 0.00 3.41
3317 3898 3.909430 TCACGTACAACCATTCTCACTC 58.091 45.455 0.00 0.00 0.00 3.51
3318 3899 2.661675 CACGTACAACCATTCTCACTCG 59.338 50.000 0.00 0.00 0.00 4.18
3319 3900 2.259618 CGTACAACCATTCTCACTCGG 58.740 52.381 0.00 0.00 0.00 4.63
3320 3901 2.000447 GTACAACCATTCTCACTCGGC 59.000 52.381 0.00 0.00 0.00 5.54
3321 3902 0.321653 ACAACCATTCTCACTCGGCC 60.322 55.000 0.00 0.00 0.00 6.13
3322 3903 1.026718 CAACCATTCTCACTCGGCCC 61.027 60.000 0.00 0.00 0.00 5.80
3323 3904 1.488705 AACCATTCTCACTCGGCCCA 61.489 55.000 0.00 0.00 0.00 5.36
3324 3905 1.153289 CCATTCTCACTCGGCCCAG 60.153 63.158 0.00 0.00 0.00 4.45
3325 3906 1.599047 CATTCTCACTCGGCCCAGT 59.401 57.895 0.00 0.00 0.00 4.00
3326 3907 0.742281 CATTCTCACTCGGCCCAGTG 60.742 60.000 23.25 23.25 44.61 3.66
3328 3909 1.816863 TTCTCACTCGGCCCAGTGAC 61.817 60.000 27.10 0.00 46.43 3.67
3329 3910 2.203640 TCACTCGGCCCAGTGACT 60.204 61.111 27.10 0.00 46.43 3.41
3330 3911 2.219325 CTCACTCGGCCCAGTGACTC 62.219 65.000 27.10 0.00 46.43 3.36
3331 3912 2.997897 ACTCGGCCCAGTGACTCC 60.998 66.667 0.64 0.00 0.00 3.85
3332 3913 3.775654 CTCGGCCCAGTGACTCCC 61.776 72.222 0.00 0.00 0.00 4.30
3335 3916 4.083862 GGCCCAGTGACTCCCGTC 62.084 72.222 0.00 0.00 40.64 4.79
3343 3924 3.715871 TGACTCCCGTCAAATTGCA 57.284 47.368 0.00 0.00 46.61 4.08
3344 3925 2.198827 TGACTCCCGTCAAATTGCAT 57.801 45.000 0.00 0.00 46.61 3.96
3345 3926 1.811965 TGACTCCCGTCAAATTGCATG 59.188 47.619 0.00 0.00 46.61 4.06
3346 3927 2.083774 GACTCCCGTCAAATTGCATGA 58.916 47.619 0.00 0.00 39.98 3.07
3347 3928 2.086869 ACTCCCGTCAAATTGCATGAG 58.913 47.619 0.00 0.00 0.00 2.90
3348 3929 1.402968 CTCCCGTCAAATTGCATGAGG 59.597 52.381 0.00 2.25 33.60 3.86
3349 3930 1.004161 TCCCGTCAAATTGCATGAGGA 59.996 47.619 9.48 2.21 35.30 3.71
3350 3931 1.402968 CCCGTCAAATTGCATGAGGAG 59.597 52.381 9.48 0.00 35.30 3.69
3351 3932 2.086869 CCGTCAAATTGCATGAGGAGT 58.913 47.619 9.48 0.00 35.30 3.85
3352 3933 2.096496 CCGTCAAATTGCATGAGGAGTC 59.904 50.000 9.48 0.00 35.30 3.36
3353 3934 2.096496 CGTCAAATTGCATGAGGAGTCC 59.904 50.000 0.00 0.00 35.30 3.85
3354 3935 3.084039 GTCAAATTGCATGAGGAGTCCA 58.916 45.455 12.86 0.00 0.00 4.02
3355 3936 3.507233 GTCAAATTGCATGAGGAGTCCAA 59.493 43.478 12.86 0.00 0.00 3.53
3356 3937 3.507233 TCAAATTGCATGAGGAGTCCAAC 59.493 43.478 12.86 5.68 0.00 3.77
3357 3938 3.446442 AATTGCATGAGGAGTCCAACT 57.554 42.857 12.86 0.00 0.00 3.16
3358 3939 4.574674 AATTGCATGAGGAGTCCAACTA 57.425 40.909 12.86 0.00 0.00 2.24
3359 3940 4.574674 ATTGCATGAGGAGTCCAACTAA 57.425 40.909 12.86 0.00 0.00 2.24
3360 3941 3.616956 TGCATGAGGAGTCCAACTAAG 57.383 47.619 12.86 0.00 0.00 2.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.376037 GGTTTGAGGAGCCCGACTG 60.376 63.158 0.00 0.00 0.00 3.51
9 10 2.193087 TAAGGCCGGTTTGAGGAGCC 62.193 60.000 1.90 0.00 44.20 4.70
26 27 1.682854 CCGGTTAGCCCAGACGTATAA 59.317 52.381 0.00 0.00 0.00 0.98
39 40 0.036306 GATATGGGGGTGCCGGTTAG 59.964 60.000 1.90 0.00 0.00 2.34
41 42 1.994885 CTGATATGGGGGTGCCGGTT 61.995 60.000 1.90 0.00 0.00 4.44
72 73 1.005215 CAGGCCTTCCCATATCCATCC 59.995 57.143 0.00 0.00 35.39 3.51
75 76 2.054799 GTACAGGCCTTCCCATATCCA 58.945 52.381 0.00 0.00 35.39 3.41
77 78 1.692519 ACGTACAGGCCTTCCCATATC 59.307 52.381 0.00 0.00 35.39 1.63
111 112 5.330233 TCTTATCTATCAATCCGGTAGGCA 58.670 41.667 0.00 0.00 37.47 4.75
115 116 5.185249 GTGGCTCTTATCTATCAATCCGGTA 59.815 44.000 0.00 0.00 0.00 4.02
116 117 4.021016 GTGGCTCTTATCTATCAATCCGGT 60.021 45.833 0.00 0.00 0.00 5.28
123 125 5.692115 TTTGTGGTGGCTCTTATCTATCA 57.308 39.130 0.00 0.00 0.00 2.15
130 132 3.153919 GTGGAATTTGTGGTGGCTCTTA 58.846 45.455 0.00 0.00 0.00 2.10
162 164 0.872021 GTGCTAGTCCGGCAAGATCG 60.872 60.000 0.00 0.00 41.54 3.69
164 166 0.905357 AAGTGCTAGTCCGGCAAGAT 59.095 50.000 0.00 0.00 41.54 2.40
176 178 2.188817 GAGAGGGGAGGAAAAGTGCTA 58.811 52.381 0.00 0.00 0.00 3.49
190 192 4.106197 CGTAAACGAATGAGAAGAGAGGG 58.894 47.826 0.00 0.00 43.02 4.30
196 198 1.323534 CCGGCGTAAACGAATGAGAAG 59.676 52.381 6.01 0.00 43.02 2.85
279 281 5.324784 AGACAAAAACTGGTCCAGAAAAC 57.675 39.130 26.18 9.37 35.18 2.43
284 286 7.745620 AATAACTAGACAAAAACTGGTCCAG 57.254 36.000 17.88 17.88 37.52 3.86
285 287 8.528044 AAAATAACTAGACAAAAACTGGTCCA 57.472 30.769 0.00 0.00 34.58 4.02
386 415 6.166279 GGGGAAAGAAATTCAAAATCTGACC 58.834 40.000 0.00 0.00 39.98 4.02
391 439 7.815840 TTTTGGGGGAAAGAAATTCAAAATC 57.184 32.000 0.00 0.00 39.98 2.17
418 466 5.047021 TCACAAACATTTGGGAAAGTTCACA 60.047 36.000 6.83 0.00 46.74 3.58
428 476 6.734104 TGAAAAAGTTCACAAACATTTGGG 57.266 33.333 9.09 4.81 42.86 4.12
429 477 9.623350 AAAATGAAAAAGTTCACAAACATTTGG 57.377 25.926 9.09 0.00 46.40 3.28
489 537 8.106462 TGTGAATGTGAGGAGGTCATAAAAATA 58.894 33.333 0.00 0.00 37.56 1.40
537 587 8.663911 TGAGAAAAGTTCGCAAAAATGAAAATT 58.336 25.926 0.00 0.00 36.53 1.82
538 588 8.195617 TGAGAAAAGTTCGCAAAAATGAAAAT 57.804 26.923 0.00 0.00 36.53 1.82
586 639 3.881089 ACGGGTTCGAAAAGAAAGTTCAT 59.119 39.130 0.00 0.00 41.10 2.57
600 653 2.836479 AAAAACACTTCACGGGTTCG 57.164 45.000 0.00 0.00 43.02 3.95
625 678 7.277539 TGTTTGCGAATTTGAAGAAAGTTCATT 59.722 29.630 0.00 0.00 0.00 2.57
635 688 8.598509 TTCAAAAATTGTTTGCGAATTTGAAG 57.401 26.923 16.10 3.80 39.19 3.02
643 696 6.317088 TGCAAAATTCAAAAATTGTTTGCGA 58.683 28.000 17.31 9.35 44.32 5.10
720 773 8.091449 TCACGAATTTGCAAATAAAAATAGGGT 58.909 29.630 24.35 5.27 0.00 4.34
727 780 9.737427 TTAAGAGTCACGAATTTGCAAATAAAA 57.263 25.926 24.35 6.80 0.00 1.52
728 781 9.737427 TTTAAGAGTCACGAATTTGCAAATAAA 57.263 25.926 24.35 13.24 0.00 1.40
735 788 7.148804 GGGAATTTTTAAGAGTCACGAATTTGC 60.149 37.037 0.00 0.00 0.00 3.68
805 860 2.569657 CGCGTACACCAGGTAGCA 59.430 61.111 0.00 0.00 31.13 3.49
824 879 5.928839 CCATAATGTTGAGACTCCCTATTCG 59.071 44.000 0.00 0.00 0.00 3.34
825 880 6.831976 ACCATAATGTTGAGACTCCCTATTC 58.168 40.000 0.00 0.00 0.00 1.75
826 881 6.831664 ACCATAATGTTGAGACTCCCTATT 57.168 37.500 0.00 0.86 0.00 1.73
831 897 5.978814 ACACTACCATAATGTTGAGACTCC 58.021 41.667 0.00 0.00 0.00 3.85
883 949 0.599204 TTCGGACTCACAAACTCCGC 60.599 55.000 0.34 0.00 45.50 5.54
884 950 1.860676 TTTCGGACTCACAAACTCCG 58.139 50.000 0.00 0.00 46.95 4.63
896 962 0.887933 ATGCACACCCAATTTCGGAC 59.112 50.000 0.00 0.00 0.00 4.79
937 1003 0.320697 CGACTTTCGGTTTCCCTCCT 59.679 55.000 0.00 0.00 36.00 3.69
1008 1076 0.549469 ACCCTTGACCCAGACGTTTT 59.451 50.000 0.00 0.00 0.00 2.43
1010 1078 1.426751 TTACCCTTGACCCAGACGTT 58.573 50.000 0.00 0.00 0.00 3.99
1011 1079 1.652947 ATTACCCTTGACCCAGACGT 58.347 50.000 0.00 0.00 0.00 4.34
1012 1080 3.899052 TTATTACCCTTGACCCAGACG 57.101 47.619 0.00 0.00 0.00 4.18
1013 1081 4.377897 CGATTATTACCCTTGACCCAGAC 58.622 47.826 0.00 0.00 0.00 3.51
1015 1083 3.139077 GCGATTATTACCCTTGACCCAG 58.861 50.000 0.00 0.00 0.00 4.45
1016 1084 2.158726 GGCGATTATTACCCTTGACCCA 60.159 50.000 0.00 0.00 0.00 4.51
1017 1085 2.158726 TGGCGATTATTACCCTTGACCC 60.159 50.000 0.00 0.00 0.00 4.46
1018 1086 3.202829 TGGCGATTATTACCCTTGACC 57.797 47.619 0.00 0.00 0.00 4.02
1019 1087 5.570234 TTTTGGCGATTATTACCCTTGAC 57.430 39.130 0.00 0.00 0.00 3.18
1048 1116 2.808543 ACGGCTGTTTGATCTCAAAGAC 59.191 45.455 5.63 0.00 45.36 3.01
1052 1120 1.202758 ACCACGGCTGTTTGATCTCAA 60.203 47.619 0.00 0.00 0.00 3.02
1084 1152 2.481568 CTGCTGCTGATTTCACTCGAAA 59.518 45.455 0.00 0.00 44.99 3.46
1085 1153 2.071540 CTGCTGCTGATTTCACTCGAA 58.928 47.619 0.00 0.00 0.00 3.71
1086 1154 1.273327 TCTGCTGCTGATTTCACTCGA 59.727 47.619 5.03 0.00 0.00 4.04
1087 1155 1.392853 GTCTGCTGCTGATTTCACTCG 59.607 52.381 12.42 0.00 0.00 4.18
1088 1156 1.736681 GGTCTGCTGCTGATTTCACTC 59.263 52.381 12.42 0.00 0.00 3.51
1111 1179 2.162338 TTGCCCTCGTTACGACTGGG 62.162 60.000 22.70 22.70 39.05 4.45
1114 1182 0.963962 TTCTTGCCCTCGTTACGACT 59.036 50.000 2.33 0.00 0.00 4.18
1115 1183 1.787012 TTTCTTGCCCTCGTTACGAC 58.213 50.000 2.33 0.00 0.00 4.34
1116 1184 2.529780 TTTTCTTGCCCTCGTTACGA 57.470 45.000 7.39 7.39 0.00 3.43
1117 1185 2.159572 CCATTTTCTTGCCCTCGTTACG 60.160 50.000 0.00 0.00 0.00 3.18
1118 1186 2.415491 GCCATTTTCTTGCCCTCGTTAC 60.415 50.000 0.00 0.00 0.00 2.50
1146 1214 1.002430 AGAAGGCGATTCTGCTCAACA 59.998 47.619 2.26 0.00 46.80 3.33
1161 1229 3.316868 GGATCTCCACGACTAGAAGAAGG 59.683 52.174 0.00 0.00 35.64 3.46
1194 1262 2.465860 CCACGAAATGGTACTGGTGA 57.534 50.000 0.00 0.00 44.46 4.02
1242 1310 2.107141 GGGAATGAGCCGGAGTCG 59.893 66.667 5.05 0.00 0.00 4.18
1245 1313 1.452108 GTTGGGGAATGAGCCGGAG 60.452 63.158 5.05 0.00 0.00 4.63
1255 1323 1.181786 GCCGATGATTTGTTGGGGAA 58.818 50.000 0.00 0.00 0.00 3.97
1275 1343 4.796495 GCGGTAACCCTGGCCCTG 62.796 72.222 0.00 0.00 0.00 4.45
1301 1369 2.678934 AAGCCCTCGCCGTAGTCA 60.679 61.111 0.00 0.00 34.57 3.41
1351 1419 4.508128 CGTCCTGTACCGCGCCAT 62.508 66.667 0.00 0.00 0.00 4.40
1506 1574 2.111878 GGGATCAGATGGGTGCGG 59.888 66.667 0.00 0.00 0.00 5.69
1538 1606 2.062890 GAATCGGTTGAGCGCGTACG 62.063 60.000 11.84 11.84 44.07 3.67
1669 1740 2.437897 CCAGCCCAAGTCCAAGCT 59.562 61.111 0.00 0.00 35.52 3.74
1670 1741 3.376918 GCCAGCCCAAGTCCAAGC 61.377 66.667 0.00 0.00 0.00 4.01
1672 1743 4.659172 CGGCCAGCCCAAGTCCAA 62.659 66.667 2.24 0.00 0.00 3.53
1991 2062 3.126831 CCAAGATAGATCACGGTTGCTC 58.873 50.000 0.00 0.00 0.00 4.26
2103 2599 1.480789 TATTACCGACAGCAGAGGCA 58.519 50.000 0.00 0.00 44.61 4.75
2157 2653 2.441532 CCCTGGCTTGGCATCTGG 60.442 66.667 0.00 0.00 0.00 3.86
2213 2709 6.029607 CACGATTTCCCTGTTAATGTGATTG 58.970 40.000 0.00 0.00 0.00 2.67
2214 2710 5.393027 GCACGATTTCCCTGTTAATGTGATT 60.393 40.000 0.00 0.00 0.00 2.57
2215 2711 4.096382 GCACGATTTCCCTGTTAATGTGAT 59.904 41.667 0.00 0.00 0.00 3.06
2216 2712 3.438781 GCACGATTTCCCTGTTAATGTGA 59.561 43.478 0.00 0.00 0.00 3.58
2217 2713 3.190327 TGCACGATTTCCCTGTTAATGTG 59.810 43.478 0.00 0.00 0.00 3.21
2218 2714 3.417101 TGCACGATTTCCCTGTTAATGT 58.583 40.909 0.00 0.00 0.00 2.71
2219 2715 4.637483 ATGCACGATTTCCCTGTTAATG 57.363 40.909 0.00 0.00 0.00 1.90
2232 2728 2.009774 GCCTACTTGTCAATGCACGAT 58.990 47.619 0.00 0.00 0.00 3.73
2237 2733 2.113860 TCCAGCCTACTTGTCAATGC 57.886 50.000 0.00 0.00 0.00 3.56
2239 2735 4.396166 CGAATTTCCAGCCTACTTGTCAAT 59.604 41.667 0.00 0.00 0.00 2.57
2240 2736 3.751175 CGAATTTCCAGCCTACTTGTCAA 59.249 43.478 0.00 0.00 0.00 3.18
2241 2737 3.244422 ACGAATTTCCAGCCTACTTGTCA 60.244 43.478 0.00 0.00 0.00 3.58
2242 2738 3.335579 ACGAATTTCCAGCCTACTTGTC 58.664 45.455 0.00 0.00 0.00 3.18
2243 2739 3.335579 GACGAATTTCCAGCCTACTTGT 58.664 45.455 0.00 0.00 0.00 3.16
2244 2740 2.678336 GGACGAATTTCCAGCCTACTTG 59.322 50.000 0.00 0.00 35.49 3.16
2245 2741 2.572104 AGGACGAATTTCCAGCCTACTT 59.428 45.455 0.00 0.00 38.25 2.24
2246 2742 2.188817 AGGACGAATTTCCAGCCTACT 58.811 47.619 0.00 0.00 38.25 2.57
2247 2743 2.693267 AGGACGAATTTCCAGCCTAC 57.307 50.000 0.00 0.00 38.25 3.18
2248 2744 5.367945 AATAAGGACGAATTTCCAGCCTA 57.632 39.130 0.00 0.00 38.25 3.93
2249 2745 3.933861 ATAAGGACGAATTTCCAGCCT 57.066 42.857 0.00 0.00 38.25 4.58
2250 2746 5.123936 ACTAATAAGGACGAATTTCCAGCC 58.876 41.667 0.00 0.00 38.25 4.85
2251 2747 5.236695 GGACTAATAAGGACGAATTTCCAGC 59.763 44.000 0.00 0.00 38.25 4.85
2252 2748 5.462398 CGGACTAATAAGGACGAATTTCCAG 59.538 44.000 0.00 0.00 38.25 3.86
2253 2749 5.105228 ACGGACTAATAAGGACGAATTTCCA 60.105 40.000 0.00 0.00 38.25 3.53
2254 2750 5.354767 ACGGACTAATAAGGACGAATTTCC 58.645 41.667 0.00 0.00 35.66 3.13
2255 2751 5.172771 CGACGGACTAATAAGGACGAATTTC 59.827 44.000 0.00 0.00 32.44 2.17
2256 2752 5.039333 CGACGGACTAATAAGGACGAATTT 58.961 41.667 0.00 0.00 32.44 1.82
2257 2753 4.096984 ACGACGGACTAATAAGGACGAATT 59.903 41.667 0.00 0.00 32.44 2.17
2258 2754 3.629398 ACGACGGACTAATAAGGACGAAT 59.371 43.478 0.00 0.00 32.44 3.34
2259 2755 3.009723 ACGACGGACTAATAAGGACGAA 58.990 45.455 0.00 0.00 32.44 3.85
2260 2756 2.632377 ACGACGGACTAATAAGGACGA 58.368 47.619 0.00 0.00 32.44 4.20
2261 2757 3.411415 AACGACGGACTAATAAGGACG 57.589 47.619 0.00 0.00 33.73 4.79
2262 2758 4.488879 ACAAACGACGGACTAATAAGGAC 58.511 43.478 0.00 0.00 0.00 3.85
2263 2759 4.789012 ACAAACGACGGACTAATAAGGA 57.211 40.909 0.00 0.00 0.00 3.36
2264 2760 4.687483 ACAACAAACGACGGACTAATAAGG 59.313 41.667 0.00 0.00 0.00 2.69
2265 2761 5.176223 ACACAACAAACGACGGACTAATAAG 59.824 40.000 0.00 0.00 0.00 1.73
2266 2762 5.049167 ACACAACAAACGACGGACTAATAA 58.951 37.500 0.00 0.00 0.00 1.40
2272 2768 0.722848 ACACACAACAAACGACGGAC 59.277 50.000 0.00 0.00 0.00 4.79
2278 2774 8.942669 ACAATTGTATATACACACAACAAACG 57.057 30.769 15.20 0.12 37.47 3.60
2314 2810 4.689345 GTGAATTGCCAAACTACTACGAGT 59.311 41.667 0.00 0.00 0.00 4.18
2315 2811 4.929808 AGTGAATTGCCAAACTACTACGAG 59.070 41.667 0.00 0.00 0.00 4.18
2316 2812 4.688879 CAGTGAATTGCCAAACTACTACGA 59.311 41.667 0.00 0.00 0.00 3.43
2317 2813 4.688879 TCAGTGAATTGCCAAACTACTACG 59.311 41.667 0.00 0.00 0.00 3.51
2318 2814 6.554334 TTCAGTGAATTGCCAAACTACTAC 57.446 37.500 0.08 0.00 0.00 2.73
2355 2865 9.534565 GCTGTCATTGACTATAAATTAGAGTGA 57.465 33.333 17.26 0.00 33.15 3.41
2368 2878 5.893824 TGGATTCTAGAGCTGTCATTGACTA 59.106 40.000 17.26 3.98 33.15 2.59
2385 2895 6.839124 TGACTGCAAAATTACATGGATTCT 57.161 33.333 0.00 0.00 0.00 2.40
2447 2957 0.378610 GCTTGGAATAAGCCGACAGC 59.621 55.000 0.30 0.00 44.25 4.40
2448 2958 0.652592 CGCTTGGAATAAGCCGACAG 59.347 55.000 6.11 0.00 40.02 3.51
2449 2959 0.036765 ACGCTTGGAATAAGCCGACA 60.037 50.000 6.11 0.00 40.02 4.35
2450 2960 1.930567 TACGCTTGGAATAAGCCGAC 58.069 50.000 6.11 0.00 40.02 4.79
2451 2961 2.676632 TTACGCTTGGAATAAGCCGA 57.323 45.000 6.11 0.00 40.02 5.54
2452 2962 3.963383 AATTACGCTTGGAATAAGCCG 57.037 42.857 6.11 4.53 40.02 5.52
2453 2963 4.267690 GCAAAATTACGCTTGGAATAAGCC 59.732 41.667 6.11 0.00 40.02 4.35
2454 2964 4.862018 TGCAAAATTACGCTTGGAATAAGC 59.138 37.500 1.70 1.70 39.77 3.09
2455 2965 6.092748 ACTGCAAAATTACGCTTGGAATAAG 58.907 36.000 0.00 0.00 0.00 1.73
2456 2966 6.019779 ACTGCAAAATTACGCTTGGAATAA 57.980 33.333 0.00 0.00 0.00 1.40
2457 2967 5.182190 TGACTGCAAAATTACGCTTGGAATA 59.818 36.000 0.00 0.00 0.00 1.75
2458 2968 4.022416 TGACTGCAAAATTACGCTTGGAAT 60.022 37.500 0.00 0.00 0.00 3.01
2459 2969 3.316588 TGACTGCAAAATTACGCTTGGAA 59.683 39.130 0.00 0.00 0.00 3.53
2460 2970 2.881513 TGACTGCAAAATTACGCTTGGA 59.118 40.909 0.00 0.00 0.00 3.53
2461 2971 3.281341 TGACTGCAAAATTACGCTTGG 57.719 42.857 0.00 0.00 0.00 3.61
2462 2972 5.631026 ACTATGACTGCAAAATTACGCTTG 58.369 37.500 0.00 0.00 0.00 4.01
2463 2973 5.880054 ACTATGACTGCAAAATTACGCTT 57.120 34.783 0.00 0.00 0.00 4.68
2464 2974 5.411361 TCAACTATGACTGCAAAATTACGCT 59.589 36.000 0.00 0.00 0.00 5.07
2465 2975 5.627172 TCAACTATGACTGCAAAATTACGC 58.373 37.500 0.00 0.00 0.00 4.42
2466 2976 7.962373 TCAATCAACTATGACTGCAAAATTACG 59.038 33.333 0.00 0.00 38.69 3.18
2467 2977 9.793252 ATCAATCAACTATGACTGCAAAATTAC 57.207 29.630 0.00 0.00 38.69 1.89
2470 2980 9.961265 CATATCAATCAACTATGACTGCAAAAT 57.039 29.630 0.00 0.00 38.69 1.82
2471 2981 8.959548 ACATATCAATCAACTATGACTGCAAAA 58.040 29.630 0.00 0.00 38.69 2.44
2472 2982 8.510243 ACATATCAATCAACTATGACTGCAAA 57.490 30.769 0.00 0.00 38.69 3.68
2473 2983 9.612066 TTACATATCAATCAACTATGACTGCAA 57.388 29.630 0.00 0.00 38.69 4.08
2474 2984 9.045223 GTTACATATCAATCAACTATGACTGCA 57.955 33.333 0.00 0.00 38.69 4.41
2475 2985 9.265901 AGTTACATATCAATCAACTATGACTGC 57.734 33.333 0.00 0.00 38.69 4.40
2495 3005 8.293867 GCTGGAAATATGTGTACAAAAGTTACA 58.706 33.333 0.00 0.00 0.00 2.41
2496 3006 7.753580 GGCTGGAAATATGTGTACAAAAGTTAC 59.246 37.037 0.00 0.00 0.00 2.50
2497 3007 7.668052 AGGCTGGAAATATGTGTACAAAAGTTA 59.332 33.333 0.00 0.00 0.00 2.24
2498 3008 6.493458 AGGCTGGAAATATGTGTACAAAAGTT 59.507 34.615 0.00 0.00 0.00 2.66
2499 3009 6.010219 AGGCTGGAAATATGTGTACAAAAGT 58.990 36.000 0.00 0.00 0.00 2.66
2500 3010 6.515272 AGGCTGGAAATATGTGTACAAAAG 57.485 37.500 0.00 0.00 0.00 2.27
2501 3011 6.601613 CCTAGGCTGGAAATATGTGTACAAAA 59.398 38.462 0.00 0.00 0.00 2.44
2502 3012 6.119536 CCTAGGCTGGAAATATGTGTACAAA 58.880 40.000 0.00 0.00 0.00 2.83
2503 3013 5.190925 ACCTAGGCTGGAAATATGTGTACAA 59.809 40.000 9.30 0.00 0.00 2.41
2504 3014 4.719773 ACCTAGGCTGGAAATATGTGTACA 59.280 41.667 9.30 0.00 0.00 2.90
2505 3015 5.291905 ACCTAGGCTGGAAATATGTGTAC 57.708 43.478 9.30 0.00 0.00 2.90
2506 3016 6.141083 AGTACCTAGGCTGGAAATATGTGTA 58.859 40.000 9.30 0.00 0.00 2.90
2507 3017 4.969359 AGTACCTAGGCTGGAAATATGTGT 59.031 41.667 9.30 0.00 0.00 3.72
2508 3018 5.552870 AGTACCTAGGCTGGAAATATGTG 57.447 43.478 9.30 0.00 0.00 3.21
2509 3019 7.735321 AGATTAGTACCTAGGCTGGAAATATGT 59.265 37.037 9.30 0.00 0.00 2.29
2510 3020 8.140112 AGATTAGTACCTAGGCTGGAAATATG 57.860 38.462 9.30 0.00 0.00 1.78
2511 3021 8.743636 AAGATTAGTACCTAGGCTGGAAATAT 57.256 34.615 9.30 0.00 0.00 1.28
2512 3022 8.562949 AAAGATTAGTACCTAGGCTGGAAATA 57.437 34.615 9.30 0.00 0.00 1.40
2513 3023 7.453141 AAAGATTAGTACCTAGGCTGGAAAT 57.547 36.000 9.30 2.66 0.00 2.17
2514 3024 6.886178 AAAGATTAGTACCTAGGCTGGAAA 57.114 37.500 9.30 0.00 0.00 3.13
2515 3025 8.011290 AGATAAAGATTAGTACCTAGGCTGGAA 58.989 37.037 9.30 0.00 0.00 3.53
2516 3026 7.536625 AGATAAAGATTAGTACCTAGGCTGGA 58.463 38.462 9.30 0.00 0.00 3.86
2517 3027 7.784470 AGATAAAGATTAGTACCTAGGCTGG 57.216 40.000 9.30 0.00 0.00 4.85
2588 3098 3.067601 GGTCCCACTGTGAACGAATTTTT 59.932 43.478 9.86 0.00 0.00 1.94
2589 3099 2.621526 GGTCCCACTGTGAACGAATTTT 59.378 45.455 9.86 0.00 0.00 1.82
2590 3100 2.227194 GGTCCCACTGTGAACGAATTT 58.773 47.619 9.86 0.00 0.00 1.82
2591 3101 1.544759 GGGTCCCACTGTGAACGAATT 60.545 52.381 9.86 0.00 0.00 2.17
2592 3102 0.036306 GGGTCCCACTGTGAACGAAT 59.964 55.000 9.86 0.00 0.00 3.34
2595 3105 2.825982 TGGGTCCCACTGTGAACG 59.174 61.111 6.47 0.00 0.00 3.95
2639 3149 1.359848 AACGCTCGCACTAGGAAATG 58.640 50.000 0.00 0.00 0.00 2.32
2640 3150 2.094762 AAACGCTCGCACTAGGAAAT 57.905 45.000 0.00 0.00 0.00 2.17
2644 3154 0.716108 CAGAAAACGCTCGCACTAGG 59.284 55.000 0.00 0.00 0.00 3.02
2647 3157 0.814010 AACCAGAAAACGCTCGCACT 60.814 50.000 0.00 0.00 0.00 4.40
2661 3171 2.084546 GAAACCAATCGGGAGAACCAG 58.915 52.381 0.00 0.00 45.37 4.00
2663 3173 2.084546 CAGAAACCAATCGGGAGAACC 58.915 52.381 0.00 0.00 45.37 3.62
2691 3205 1.865788 GCCCATTGTGCGTCATGTGT 61.866 55.000 0.00 0.00 0.00 3.72
2708 3222 4.244463 TACGCTAATGGGCCGGCC 62.244 66.667 38.57 38.57 0.00 6.13
2709 3223 2.970868 GTACGCTAATGGGCCGGC 60.971 66.667 21.18 21.18 0.00 6.13
2710 3224 0.745128 TTTGTACGCTAATGGGCCGG 60.745 55.000 0.00 0.00 0.00 6.13
2711 3225 0.375803 GTTTGTACGCTAATGGGCCG 59.624 55.000 0.00 0.00 0.00 6.13
2727 3292 4.779696 TCTTTTACTGGTACGGGTTGTTT 58.220 39.130 0.00 0.00 40.47 2.83
2732 3297 6.063404 TGAAAATTCTTTTACTGGTACGGGT 58.937 36.000 0.00 0.00 33.46 5.28
2738 3303 8.912988 TGAGACAATGAAAATTCTTTTACTGGT 58.087 29.630 0.00 0.00 31.94 4.00
2782 3347 8.322906 TCACATCACAATACTTTTTCTCGAAT 57.677 30.769 0.00 0.00 0.00 3.34
2784 3349 7.151976 TCTCACATCACAATACTTTTTCTCGA 58.848 34.615 0.00 0.00 0.00 4.04
2788 3353 9.055248 CGATTTCTCACATCACAATACTTTTTC 57.945 33.333 0.00 0.00 0.00 2.29
2794 3359 6.092122 TGGTTCGATTTCTCACATCACAATAC 59.908 38.462 0.00 0.00 0.00 1.89
2797 3362 4.384940 TGGTTCGATTTCTCACATCACAA 58.615 39.130 0.00 0.00 0.00 3.33
2800 3365 3.436704 GCTTGGTTCGATTTCTCACATCA 59.563 43.478 0.00 0.00 0.00 3.07
2802 3367 2.749621 GGCTTGGTTCGATTTCTCACAT 59.250 45.455 0.00 0.00 0.00 3.21
2805 3370 2.559698 TGGCTTGGTTCGATTTCTCA 57.440 45.000 0.00 0.00 0.00 3.27
2806 3371 3.440173 TGATTGGCTTGGTTCGATTTCTC 59.560 43.478 0.00 0.00 0.00 2.87
2809 3374 2.890311 TGTGATTGGCTTGGTTCGATTT 59.110 40.909 0.00 0.00 0.00 2.17
2818 3383 1.610038 TGCTTGAGTGTGATTGGCTTG 59.390 47.619 0.00 0.00 0.00 4.01
2819 3384 1.610522 GTGCTTGAGTGTGATTGGCTT 59.389 47.619 0.00 0.00 0.00 4.35
2821 3386 1.198637 GAGTGCTTGAGTGTGATTGGC 59.801 52.381 0.00 0.00 0.00 4.52
2822 3387 2.497138 TGAGTGCTTGAGTGTGATTGG 58.503 47.619 0.00 0.00 0.00 3.16
2824 3389 4.558095 GCATTTGAGTGCTTGAGTGTGATT 60.558 41.667 0.00 0.00 41.82 2.57
2825 3390 3.057736 GCATTTGAGTGCTTGAGTGTGAT 60.058 43.478 0.00 0.00 41.82 3.06
2838 3403 5.746990 AGTCTAGTGGTTAGCATTTGAGT 57.253 39.130 0.00 0.00 0.00 3.41
2839 3404 7.602644 TGTTTAGTCTAGTGGTTAGCATTTGAG 59.397 37.037 0.00 0.00 0.00 3.02
2843 3408 7.549488 GTCATGTTTAGTCTAGTGGTTAGCATT 59.451 37.037 0.00 0.00 0.00 3.56
2845 3410 6.210784 AGTCATGTTTAGTCTAGTGGTTAGCA 59.789 38.462 0.00 0.00 0.00 3.49
2846 3411 6.631962 AGTCATGTTTAGTCTAGTGGTTAGC 58.368 40.000 0.00 0.00 0.00 3.09
2847 3412 8.407064 CCTAGTCATGTTTAGTCTAGTGGTTAG 58.593 40.741 0.00 0.00 0.00 2.34
2848 3413 7.892241 ACCTAGTCATGTTTAGTCTAGTGGTTA 59.108 37.037 0.00 0.00 0.00 2.85
2859 3425 8.870879 GCTAGTTAAACACCTAGTCATGTTTAG 58.129 37.037 17.05 12.08 46.49 1.85
2907 3473 1.407618 AGTATCTGGCGCGATTGTGTA 59.592 47.619 12.10 0.00 0.00 2.90
2908 3474 0.175760 AGTATCTGGCGCGATTGTGT 59.824 50.000 12.10 0.00 0.00 3.72
2913 3479 0.595588 CTCTCAGTATCTGGCGCGAT 59.404 55.000 12.10 1.58 31.51 4.58
2916 3482 0.747255 TTCCTCTCAGTATCTGGCGC 59.253 55.000 0.00 0.00 31.51 6.53
2917 3483 3.526931 TTTTCCTCTCAGTATCTGGCG 57.473 47.619 0.00 0.00 31.51 5.69
3086 3663 7.542824 TCGAGAAATAATCACAACAATACGTCA 59.457 33.333 0.00 0.00 0.00 4.35
3089 3666 9.702726 AATTCGAGAAATAATCACAACAATACG 57.297 29.630 0.00 0.00 0.00 3.06
3093 3670 7.864882 TGCAAATTCGAGAAATAATCACAACAA 59.135 29.630 0.00 0.00 0.00 2.83
3095 3672 7.795431 TGCAAATTCGAGAAATAATCACAAC 57.205 32.000 0.00 0.00 0.00 3.32
3098 3675 8.226543 TGTTTGCAAATTCGAGAAATAATCAC 57.773 30.769 16.21 0.00 0.00 3.06
3192 3773 8.460428 CAAGTCTACAGTACCTCCTAGTTTTAG 58.540 40.741 0.00 0.00 0.00 1.85
3193 3774 7.395489 CCAAGTCTACAGTACCTCCTAGTTTTA 59.605 40.741 0.00 0.00 0.00 1.52
3200 3781 2.458620 GCCAAGTCTACAGTACCTCCT 58.541 52.381 0.00 0.00 0.00 3.69
3208 3789 5.356882 TCAAAAATTCGCCAAGTCTACAG 57.643 39.130 0.00 0.00 0.00 2.74
3214 3795 5.351189 GGCATATTTCAAAAATTCGCCAAGT 59.649 36.000 14.81 0.00 36.99 3.16
3215 3796 5.220643 GGGCATATTTCAAAAATTCGCCAAG 60.221 40.000 18.57 0.00 38.78 3.61
3216 3797 4.633565 GGGCATATTTCAAAAATTCGCCAA 59.366 37.500 18.57 0.00 38.78 4.52
3217 3798 4.187694 GGGCATATTTCAAAAATTCGCCA 58.812 39.130 18.57 0.00 38.78 5.69
3218 3799 4.033932 GTGGGCATATTTCAAAAATTCGCC 59.966 41.667 12.72 12.72 36.26 5.54
3219 3800 4.629200 TGTGGGCATATTTCAAAAATTCGC 59.371 37.500 0.00 0.00 0.00 4.70
3220 3801 6.534436 TCATGTGGGCATATTTCAAAAATTCG 59.466 34.615 0.00 0.00 33.30 3.34
3221 3802 7.846644 TCATGTGGGCATATTTCAAAAATTC 57.153 32.000 0.00 0.00 33.30 2.17
3222 3803 7.201750 GCATCATGTGGGCATATTTCAAAAATT 60.202 33.333 0.00 0.00 33.30 1.82
3223 3804 6.261381 GCATCATGTGGGCATATTTCAAAAAT 59.739 34.615 0.00 0.00 33.30 1.82
3224 3805 5.585445 GCATCATGTGGGCATATTTCAAAAA 59.415 36.000 0.00 0.00 33.30 1.94
3225 3806 5.104859 AGCATCATGTGGGCATATTTCAAAA 60.105 36.000 8.29 0.00 33.30 2.44
3226 3807 4.406326 AGCATCATGTGGGCATATTTCAAA 59.594 37.500 8.29 0.00 33.30 2.69
3227 3808 3.962063 AGCATCATGTGGGCATATTTCAA 59.038 39.130 8.29 0.00 33.30 2.69
3228 3809 3.568443 AGCATCATGTGGGCATATTTCA 58.432 40.909 8.29 0.00 33.30 2.69
3229 3810 4.595762 AAGCATCATGTGGGCATATTTC 57.404 40.909 8.29 0.00 33.30 2.17
3230 3811 4.162698 ACAAAGCATCATGTGGGCATATTT 59.837 37.500 8.29 0.00 33.30 1.40
3231 3812 3.707611 ACAAAGCATCATGTGGGCATATT 59.292 39.130 8.29 0.00 33.30 1.28
3232 3813 3.302161 ACAAAGCATCATGTGGGCATAT 58.698 40.909 8.29 0.00 33.30 1.78
3233 3814 2.737544 ACAAAGCATCATGTGGGCATA 58.262 42.857 8.29 0.00 33.30 3.14
3234 3815 1.563924 ACAAAGCATCATGTGGGCAT 58.436 45.000 8.29 0.00 35.32 4.40
3235 3816 1.340088 AACAAAGCATCATGTGGGCA 58.660 45.000 8.29 0.00 0.00 5.36
3236 3817 2.460757 AAACAAAGCATCATGTGGGC 57.539 45.000 0.00 0.00 0.00 5.36
3237 3818 5.138125 AGTAAAACAAAGCATCATGTGGG 57.862 39.130 0.00 0.00 0.00 4.61
3238 3819 6.324819 CCTAGTAAAACAAAGCATCATGTGG 58.675 40.000 0.00 0.00 0.00 4.17
3239 3820 6.150976 TCCCTAGTAAAACAAAGCATCATGTG 59.849 38.462 0.00 0.00 0.00 3.21
3240 3821 6.245408 TCCCTAGTAAAACAAAGCATCATGT 58.755 36.000 0.00 0.00 0.00 3.21
3241 3822 6.757897 TCCCTAGTAAAACAAAGCATCATG 57.242 37.500 0.00 0.00 0.00 3.07
3242 3823 9.071276 CATATCCCTAGTAAAACAAAGCATCAT 57.929 33.333 0.00 0.00 0.00 2.45
3243 3824 7.502226 CCATATCCCTAGTAAAACAAAGCATCA 59.498 37.037 0.00 0.00 0.00 3.07
3244 3825 7.719633 TCCATATCCCTAGTAAAACAAAGCATC 59.280 37.037 0.00 0.00 0.00 3.91
3245 3826 7.582719 TCCATATCCCTAGTAAAACAAAGCAT 58.417 34.615 0.00 0.00 0.00 3.79
3246 3827 6.964464 TCCATATCCCTAGTAAAACAAAGCA 58.036 36.000 0.00 0.00 0.00 3.91
3247 3828 7.013369 CCTTCCATATCCCTAGTAAAACAAAGC 59.987 40.741 0.00 0.00 0.00 3.51
3248 3829 8.272173 TCCTTCCATATCCCTAGTAAAACAAAG 58.728 37.037 0.00 0.00 0.00 2.77
3249 3830 8.165267 TCCTTCCATATCCCTAGTAAAACAAA 57.835 34.615 0.00 0.00 0.00 2.83
3250 3831 7.758820 TCCTTCCATATCCCTAGTAAAACAA 57.241 36.000 0.00 0.00 0.00 2.83
3251 3832 7.758820 TTCCTTCCATATCCCTAGTAAAACA 57.241 36.000 0.00 0.00 0.00 2.83
3252 3833 8.661345 AGATTCCTTCCATATCCCTAGTAAAAC 58.339 37.037 0.00 0.00 0.00 2.43
3253 3834 8.814448 AGATTCCTTCCATATCCCTAGTAAAA 57.186 34.615 0.00 0.00 0.00 1.52
3254 3835 8.814448 AAGATTCCTTCCATATCCCTAGTAAA 57.186 34.615 0.00 0.00 0.00 2.01
3255 3836 8.814448 AAAGATTCCTTCCATATCCCTAGTAA 57.186 34.615 0.00 0.00 0.00 2.24
3256 3837 8.242325 AGAAAGATTCCTTCCATATCCCTAGTA 58.758 37.037 0.00 0.00 0.00 1.82
3257 3838 7.085601 AGAAAGATTCCTTCCATATCCCTAGT 58.914 38.462 0.00 0.00 0.00 2.57
3258 3839 7.457535 AGAGAAAGATTCCTTCCATATCCCTAG 59.542 40.741 0.00 0.00 0.00 3.02
3259 3840 7.316841 AGAGAAAGATTCCTTCCATATCCCTA 58.683 38.462 0.00 0.00 0.00 3.53
3260 3841 6.156812 AGAGAAAGATTCCTTCCATATCCCT 58.843 40.000 0.00 0.00 0.00 4.20
3261 3842 6.272090 AGAGAGAAAGATTCCTTCCATATCCC 59.728 42.308 0.00 0.00 0.00 3.85
3262 3843 7.315066 AGAGAGAAAGATTCCTTCCATATCC 57.685 40.000 0.00 0.00 0.00 2.59
3263 3844 7.090173 CGAGAGAGAAAGATTCCTTCCATATC 58.910 42.308 0.00 0.00 0.00 1.63
3264 3845 6.518200 GCGAGAGAGAAAGATTCCTTCCATAT 60.518 42.308 0.00 0.00 0.00 1.78
3265 3846 5.221342 GCGAGAGAGAAAGATTCCTTCCATA 60.221 44.000 0.00 0.00 0.00 2.74
3266 3847 4.442753 GCGAGAGAGAAAGATTCCTTCCAT 60.443 45.833 0.00 0.00 0.00 3.41
3267 3848 3.118956 GCGAGAGAGAAAGATTCCTTCCA 60.119 47.826 0.00 0.00 0.00 3.53
3268 3849 3.453424 GCGAGAGAGAAAGATTCCTTCC 58.547 50.000 0.00 0.00 0.00 3.46
3269 3850 3.112580 CGCGAGAGAGAAAGATTCCTTC 58.887 50.000 0.00 0.00 0.00 3.46
3270 3851 2.737039 GCGCGAGAGAGAAAGATTCCTT 60.737 50.000 12.10 0.00 0.00 3.36
3271 3852 1.202359 GCGCGAGAGAGAAAGATTCCT 60.202 52.381 12.10 0.00 0.00 3.36
3272 3853 1.204792 GCGCGAGAGAGAAAGATTCC 58.795 55.000 12.10 0.00 0.00 3.01
3273 3854 0.843242 CGCGCGAGAGAGAAAGATTC 59.157 55.000 28.94 0.00 0.00 2.52
3274 3855 0.171455 ACGCGCGAGAGAGAAAGATT 59.829 50.000 39.36 5.70 33.96 2.40
3275 3856 0.248296 GACGCGCGAGAGAGAAAGAT 60.248 55.000 39.36 9.23 33.96 2.40
3276 3857 1.134901 GACGCGCGAGAGAGAAAGA 59.865 57.895 39.36 0.00 33.96 2.52
3277 3858 0.455295 AAGACGCGCGAGAGAGAAAG 60.455 55.000 39.36 2.87 33.96 2.62
3278 3859 0.454620 GAAGACGCGCGAGAGAGAAA 60.455 55.000 39.36 0.00 33.96 2.52
3279 3860 1.134901 GAAGACGCGCGAGAGAGAA 59.865 57.895 39.36 0.00 33.96 2.87
3280 3861 2.033194 TGAAGACGCGCGAGAGAGA 61.033 57.895 39.36 12.52 33.96 3.10
3281 3862 1.865622 GTGAAGACGCGCGAGAGAG 60.866 63.158 39.36 6.47 33.96 3.20
3282 3863 2.176055 GTGAAGACGCGCGAGAGA 59.824 61.111 39.36 13.10 33.96 3.10
3283 3864 3.234041 CGTGAAGACGCGCGAGAG 61.234 66.667 39.36 15.57 43.93 3.20
3292 3873 4.150098 GTGAGAATGGTTGTACGTGAAGAC 59.850 45.833 0.00 0.00 0.00 3.01
3293 3874 4.038763 AGTGAGAATGGTTGTACGTGAAGA 59.961 41.667 0.00 0.00 0.00 2.87
3294 3875 4.307432 AGTGAGAATGGTTGTACGTGAAG 58.693 43.478 0.00 0.00 0.00 3.02
3295 3876 4.304110 GAGTGAGAATGGTTGTACGTGAA 58.696 43.478 0.00 0.00 0.00 3.18
3296 3877 3.610821 CGAGTGAGAATGGTTGTACGTGA 60.611 47.826 0.00 0.00 0.00 4.35
3297 3878 2.661675 CGAGTGAGAATGGTTGTACGTG 59.338 50.000 0.00 0.00 0.00 4.49
3298 3879 2.352421 CCGAGTGAGAATGGTTGTACGT 60.352 50.000 0.00 0.00 0.00 3.57
3299 3880 2.259618 CCGAGTGAGAATGGTTGTACG 58.740 52.381 0.00 0.00 0.00 3.67
3300 3881 2.000447 GCCGAGTGAGAATGGTTGTAC 59.000 52.381 0.00 0.00 0.00 2.90
3301 3882 1.066430 GGCCGAGTGAGAATGGTTGTA 60.066 52.381 0.00 0.00 0.00 2.41
3302 3883 0.321653 GGCCGAGTGAGAATGGTTGT 60.322 55.000 0.00 0.00 0.00 3.32
3303 3884 1.026718 GGGCCGAGTGAGAATGGTTG 61.027 60.000 0.00 0.00 0.00 3.77
3304 3885 1.299976 GGGCCGAGTGAGAATGGTT 59.700 57.895 0.00 0.00 0.00 3.67
3305 3886 1.903877 CTGGGCCGAGTGAGAATGGT 61.904 60.000 6.60 0.00 0.00 3.55
3306 3887 1.153289 CTGGGCCGAGTGAGAATGG 60.153 63.158 6.60 0.00 0.00 3.16
3307 3888 0.742281 CACTGGGCCGAGTGAGAATG 60.742 60.000 36.84 13.67 45.39 2.67
3308 3889 0.904865 TCACTGGGCCGAGTGAGAAT 60.905 55.000 37.90 6.99 45.96 2.40
3309 3890 1.533033 TCACTGGGCCGAGTGAGAA 60.533 57.895 37.90 22.09 45.96 2.87
3310 3891 2.117423 TCACTGGGCCGAGTGAGA 59.883 61.111 37.90 22.76 45.96 3.27
3313 3894 2.262915 GAGTCACTGGGCCGAGTG 59.737 66.667 34.98 34.98 44.14 3.51
3314 3895 2.997897 GGAGTCACTGGGCCGAGT 60.998 66.667 15.64 15.64 0.00 4.18
3315 3896 3.775654 GGGAGTCACTGGGCCGAG 61.776 72.222 14.03 14.03 0.00 4.63
3328 3909 1.402968 CCTCATGCAATTTGACGGGAG 59.597 52.381 0.00 1.42 0.00 4.30
3329 3910 1.004161 TCCTCATGCAATTTGACGGGA 59.996 47.619 0.00 0.00 0.00 5.14
3330 3911 1.402968 CTCCTCATGCAATTTGACGGG 59.597 52.381 0.00 0.00 0.00 5.28
3331 3912 2.086869 ACTCCTCATGCAATTTGACGG 58.913 47.619 0.00 0.00 0.00 4.79
3332 3913 2.096496 GGACTCCTCATGCAATTTGACG 59.904 50.000 0.00 0.00 0.00 4.35
3333 3914 3.084039 TGGACTCCTCATGCAATTTGAC 58.916 45.455 0.00 0.00 0.00 3.18
3334 3915 3.438216 TGGACTCCTCATGCAATTTGA 57.562 42.857 0.00 0.00 0.00 2.69
3335 3916 3.508793 AGTTGGACTCCTCATGCAATTTG 59.491 43.478 0.00 0.00 29.62 2.32
3336 3917 3.771216 AGTTGGACTCCTCATGCAATTT 58.229 40.909 0.00 0.00 29.62 1.82
3337 3918 3.446442 AGTTGGACTCCTCATGCAATT 57.554 42.857 0.00 0.00 29.62 2.32
3338 3919 4.521146 CTTAGTTGGACTCCTCATGCAAT 58.479 43.478 0.00 0.00 29.62 3.56
3339 3920 3.942829 CTTAGTTGGACTCCTCATGCAA 58.057 45.455 0.00 0.00 0.00 4.08
3340 3921 3.616956 CTTAGTTGGACTCCTCATGCA 57.383 47.619 0.00 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.