Multiple sequence alignment - TraesCS3A01G395300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G395300 chr3A 100.000 2396 0 0 961 3356 642682221 642679826 0.000000e+00 4425.0
1 TraesCS3A01G395300 chr3A 100.000 510 0 0 1 510 642683181 642682672 0.000000e+00 942.0
2 TraesCS3A01G395300 chr3A 82.812 128 8 7 3218 3344 640370932 640371046 5.920000e-18 102.0
3 TraesCS3A01G395300 chr3D 93.514 1696 61 17 961 2641 504291561 504289900 0.000000e+00 2477.0
4 TraesCS3A01G395300 chr3D 85.455 550 27 15 1 510 504292148 504291612 1.070000e-144 523.0
5 TraesCS3A01G395300 chr3D 82.000 150 25 2 3034 3183 152563894 152563747 3.520000e-25 126.0
6 TraesCS3A01G395300 chr3B 93.194 1440 65 18 962 2383 665985151 665983727 0.000000e+00 2085.0
7 TraesCS3A01G395300 chr3B 84.871 542 34 18 1 509 665985743 665985217 1.390000e-138 503.0
8 TraesCS3A01G395300 chr3B 85.714 126 11 3 3219 3344 434065835 434065953 3.520000e-25 126.0
9 TraesCS3A01G395300 chr3B 77.869 122 13 6 2828 2935 665983158 665983037 2.800000e-06 63.9
10 TraesCS3A01G395300 chr7A 90.775 542 43 2 1204 1739 692203738 692203198 0.000000e+00 717.0
11 TraesCS3A01G395300 chr7A 90.930 441 33 4 1305 1739 692202335 692201896 1.340000e-163 586.0
12 TraesCS3A01G395300 chr7A 82.432 148 24 2 3034 3181 125993207 125993062 9.770000e-26 128.0
13 TraesCS3A01G395300 chr7D 90.055 543 45 3 1203 1739 599950439 599949900 0.000000e+00 695.0
14 TraesCS3A01G395300 chr7D 88.497 539 55 2 1203 1735 599949142 599948605 0.000000e+00 645.0
15 TraesCS3A01G395300 chr7B 88.268 537 57 2 1203 1733 679719964 679719428 3.650000e-179 638.0
16 TraesCS3A01G395300 chr7B 86.891 534 60 3 1204 1731 679721281 679720752 1.040000e-164 590.0
17 TraesCS3A01G395300 chr7B 86.355 535 62 6 1203 1731 679723961 679723432 1.040000e-159 573.0
18 TraesCS3A01G395300 chr7B 82.000 150 25 2 3034 3183 15373109 15372962 3.520000e-25 126.0
19 TraesCS3A01G395300 chr6B 88.750 160 15 2 3025 3184 153314465 153314621 3.420000e-45 193.0
20 TraesCS3A01G395300 chr4A 87.234 141 16 2 3025 3165 6268629 6268767 3.470000e-35 159.0
21 TraesCS3A01G395300 chr2B 88.889 135 7 3 3219 3351 163737097 163737225 3.470000e-35 159.0
22 TraesCS3A01G395300 chr4D 86.331 139 18 1 3027 3165 55364485 55364348 2.090000e-32 150.0
23 TraesCS3A01G395300 chr5D 87.407 135 9 3 3219 3351 498482913 498482785 7.500000e-32 148.0
24 TraesCS3A01G395300 chr5D 81.761 159 27 2 3025 3183 35145295 35145451 7.560000e-27 132.0
25 TraesCS3A01G395300 chr1A 86.429 140 13 6 3219 3354 514090044 514090181 7.500000e-32 148.0
26 TraesCS3A01G395300 chr1A 83.571 140 22 1 3025 3164 564611392 564611530 2.720000e-26 130.0
27 TraesCS3A01G395300 chr5B 81.333 150 26 2 3034 3183 457719563 457719416 1.640000e-23 121.0
28 TraesCS3A01G395300 chr5B 83.704 135 14 3 3219 3351 476045042 476045170 1.640000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G395300 chr3A 642679826 642683181 3355 True 2683.500000 4425 100.000000 1 3356 2 chr3A.!!$R1 3355
1 TraesCS3A01G395300 chr3D 504289900 504292148 2248 True 1500.000000 2477 89.484500 1 2641 2 chr3D.!!$R2 2640
2 TraesCS3A01G395300 chr3B 665983037 665985743 2706 True 883.966667 2085 85.311333 1 2935 3 chr3B.!!$R1 2934
3 TraesCS3A01G395300 chr7A 692201896 692203738 1842 True 651.500000 717 90.852500 1204 1739 2 chr7A.!!$R2 535
4 TraesCS3A01G395300 chr7D 599948605 599950439 1834 True 670.000000 695 89.276000 1203 1739 2 chr7D.!!$R1 536
5 TraesCS3A01G395300 chr7B 679719428 679723961 4533 True 600.333333 638 87.171333 1203 1733 3 chr7B.!!$R2 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
182 196 0.88649 AATCATCCGCCCAATCGCTC 60.886 55.000 0.0 0.0 0.0 5.03 F
356 418 1.21671 GCTCCCTTCCTGACTGACG 59.783 63.158 0.0 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1362 1453 0.756903 ACTTGCAGTTGAGGTACCGT 59.243 50.000 6.18 0.0 0.00 4.83 R
2385 7841 8.910944 AGTAAAGCTAGTAATCAACTAATCGGA 58.089 33.333 0.00 0.0 40.21 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.517538 ATCCCCAGCACCAATCCCAA 61.518 55.000 0.00 0.00 0.00 4.12
72 73 1.078759 CGGTCGAGCAGTCAATCACC 61.079 60.000 15.89 0.00 0.00 4.02
77 78 2.359850 GCAGTCAATCACCCGCCA 60.360 61.111 0.00 0.00 0.00 5.69
89 90 2.106683 CCCGCCAAACATCTCCGAC 61.107 63.158 0.00 0.00 0.00 4.79
100 101 2.028476 ACATCTCCGACGGATGAAAACA 60.028 45.455 21.37 0.00 42.02 2.83
151 157 4.399567 GCGAGACGAGAATTACGTTTAC 57.600 45.455 10.62 5.94 43.97 2.01
152 158 3.062901 GCGAGACGAGAATTACGTTTACG 60.063 47.826 10.62 14.71 43.97 3.18
182 196 0.886490 AATCATCCGCCCAATCGCTC 60.886 55.000 0.00 0.00 0.00 5.03
213 239 1.796749 GTCGTCGTCGCAGTTCTCC 60.797 63.158 0.00 0.00 36.96 3.71
222 248 2.670414 GTCGCAGTTCTCCATTTCTCTG 59.330 50.000 0.00 0.00 0.00 3.35
226 252 2.307098 CAGTTCTCCATTTCTCTGGGGT 59.693 50.000 0.00 0.00 38.04 4.95
254 295 2.880879 CGATCGAGGTGCGGTGTG 60.881 66.667 10.26 0.00 41.33 3.82
255 296 2.509336 GATCGAGGTGCGGTGTGG 60.509 66.667 0.00 0.00 41.33 4.17
256 297 3.296709 GATCGAGGTGCGGTGTGGT 62.297 63.158 0.00 0.00 41.33 4.16
257 298 3.589654 ATCGAGGTGCGGTGTGGTG 62.590 63.158 0.00 0.00 41.33 4.17
356 418 1.216710 GCTCCCTTCCTGACTGACG 59.783 63.158 0.00 0.00 0.00 4.35
399 466 1.226831 CTTCTCTCTTCCCGCGAGC 60.227 63.158 8.23 0.00 0.00 5.03
2393 7849 1.560923 CAAGACCACGCTCCGATTAG 58.439 55.000 0.00 0.00 0.00 1.73
2396 7852 1.135083 AGACCACGCTCCGATTAGTTG 60.135 52.381 0.00 0.00 0.00 3.16
2397 7853 0.892755 ACCACGCTCCGATTAGTTGA 59.107 50.000 0.00 0.00 0.00 3.18
2399 7855 2.093658 ACCACGCTCCGATTAGTTGATT 60.094 45.455 0.00 0.00 0.00 2.57
2400 7856 3.131577 ACCACGCTCCGATTAGTTGATTA 59.868 43.478 0.00 0.00 0.00 1.75
2402 7858 4.360563 CACGCTCCGATTAGTTGATTACT 58.639 43.478 0.00 0.00 41.04 2.24
2403 7859 5.506815 CCACGCTCCGATTAGTTGATTACTA 60.507 44.000 0.00 0.00 38.33 1.82
2405 7861 4.617645 CGCTCCGATTAGTTGATTACTAGC 59.382 45.833 0.00 0.00 40.35 3.42
2407 7863 6.217294 GCTCCGATTAGTTGATTACTAGCTT 58.783 40.000 0.00 0.00 40.35 3.74
2408 7864 6.702282 GCTCCGATTAGTTGATTACTAGCTTT 59.298 38.462 0.00 0.00 40.35 3.51
2409 7865 7.866393 GCTCCGATTAGTTGATTACTAGCTTTA 59.134 37.037 0.00 0.00 40.35 1.85
2410 7866 9.182933 CTCCGATTAGTTGATTACTAGCTTTAC 57.817 37.037 0.00 0.00 40.35 2.01
2411 7867 8.910944 TCCGATTAGTTGATTACTAGCTTTACT 58.089 33.333 0.00 0.00 40.35 2.24
2460 8038 3.043419 CCGGCTACTGATCCTCGG 58.957 66.667 0.00 0.00 0.00 4.63
2474 8052 1.089920 CCTCGGCCAAGATGTTTCTG 58.910 55.000 2.24 0.00 30.72 3.02
2484 8088 5.766222 CCAAGATGTTTCTGGTTCTTTCTG 58.234 41.667 0.00 0.00 30.72 3.02
2501 8112 3.503827 TCTGCCTGTACATACAAGTCG 57.496 47.619 0.00 0.00 35.50 4.18
2517 8128 0.099613 GTCGAGAGAGATCGCAAGCA 59.900 55.000 0.00 0.00 43.49 3.91
2543 8155 6.438763 ACACAGATTCTTTCGTTCCAATTTC 58.561 36.000 0.00 0.00 0.00 2.17
2544 8156 6.039270 ACACAGATTCTTTCGTTCCAATTTCA 59.961 34.615 0.00 0.00 0.00 2.69
2545 8157 7.086376 CACAGATTCTTTCGTTCCAATTTCAT 58.914 34.615 0.00 0.00 0.00 2.57
2546 8158 7.272084 CACAGATTCTTTCGTTCCAATTTCATC 59.728 37.037 0.00 0.00 0.00 2.92
2547 8159 7.175641 ACAGATTCTTTCGTTCCAATTTCATCT 59.824 33.333 0.00 0.00 0.00 2.90
2548 8160 7.695618 CAGATTCTTTCGTTCCAATTTCATCTC 59.304 37.037 0.00 0.00 0.00 2.75
2549 8161 6.875948 TTCTTTCGTTCCAATTTCATCTCA 57.124 33.333 0.00 0.00 0.00 3.27
2550 8162 7.452880 TTCTTTCGTTCCAATTTCATCTCAT 57.547 32.000 0.00 0.00 0.00 2.90
2551 8163 7.076842 TCTTTCGTTCCAATTTCATCTCATC 57.923 36.000 0.00 0.00 0.00 2.92
2557 8169 6.563567 CGTTCCAATTTCATCTCATCTCATCG 60.564 42.308 0.00 0.00 0.00 3.84
2566 8178 1.226688 CATCTCATCGCCGTCGTGT 60.227 57.895 0.00 0.00 36.96 4.49
2580 8192 2.091277 CGTCGTGTTCTGCTTCTTCATC 59.909 50.000 0.00 0.00 0.00 2.92
2585 8197 2.275318 GTTCTGCTTCTTCATCCTCGG 58.725 52.381 0.00 0.00 0.00 4.63
2589 8201 0.827368 GCTTCTTCATCCTCGGGTCT 59.173 55.000 0.00 0.00 0.00 3.85
2590 8202 1.472376 GCTTCTTCATCCTCGGGTCTG 60.472 57.143 0.00 0.00 0.00 3.51
2591 8203 0.537188 TTCTTCATCCTCGGGTCTGC 59.463 55.000 0.00 0.00 0.00 4.26
2593 8205 0.103937 CTTCATCCTCGGGTCTGCTC 59.896 60.000 0.00 0.00 0.00 4.26
2595 8207 1.039785 TCATCCTCGGGTCTGCTCTG 61.040 60.000 0.00 0.00 0.00 3.35
2609 8228 2.996444 CTCTGCACACTGTGAGCAA 58.004 52.632 27.91 19.04 42.97 3.91
2641 8260 2.783135 GAACATCAGTTCCTCCAAGCA 58.217 47.619 0.00 0.00 46.68 3.91
2643 8262 2.996631 ACATCAGTTCCTCCAAGCATC 58.003 47.619 0.00 0.00 0.00 3.91
2644 8263 2.295885 CATCAGTTCCTCCAAGCATCC 58.704 52.381 0.00 0.00 0.00 3.51
2645 8264 1.661463 TCAGTTCCTCCAAGCATCCT 58.339 50.000 0.00 0.00 0.00 3.24
2646 8265 1.988107 TCAGTTCCTCCAAGCATCCTT 59.012 47.619 0.00 0.00 0.00 3.36
2648 8267 3.587061 TCAGTTCCTCCAAGCATCCTTAA 59.413 43.478 0.00 0.00 0.00 1.85
2650 8269 5.428457 TCAGTTCCTCCAAGCATCCTTAATA 59.572 40.000 0.00 0.00 0.00 0.98
2651 8270 6.069673 TCAGTTCCTCCAAGCATCCTTAATAA 60.070 38.462 0.00 0.00 0.00 1.40
2653 8272 7.939039 CAGTTCCTCCAAGCATCCTTAATAATA 59.061 37.037 0.00 0.00 0.00 0.98
2654 8273 8.673251 AGTTCCTCCAAGCATCCTTAATAATAT 58.327 33.333 0.00 0.00 0.00 1.28
2655 8274 9.959721 GTTCCTCCAAGCATCCTTAATAATATA 57.040 33.333 0.00 0.00 0.00 0.86
2682 8301 3.801307 TTTAAGGGAAAGAGGTCCACC 57.199 47.619 0.00 0.00 39.70 4.61
2683 8302 1.272807 TAAGGGAAAGAGGTCCACCG 58.727 55.000 0.00 0.00 39.70 4.94
2684 8303 0.767060 AAGGGAAAGAGGTCCACCGT 60.767 55.000 0.00 0.00 39.70 4.83
2685 8304 1.192803 AGGGAAAGAGGTCCACCGTC 61.193 60.000 0.00 0.00 39.70 4.79
2686 8305 1.295746 GGAAAGAGGTCCACCGTCC 59.704 63.158 0.00 0.00 42.08 4.79
2687 8306 1.477685 GGAAAGAGGTCCACCGTCCA 61.478 60.000 0.00 0.00 42.08 4.02
2688 8307 0.613777 GAAAGAGGTCCACCGTCCAT 59.386 55.000 0.00 0.00 42.08 3.41
2689 8308 0.613777 AAAGAGGTCCACCGTCCATC 59.386 55.000 0.00 0.00 42.08 3.51
2690 8309 1.265454 AAGAGGTCCACCGTCCATCC 61.265 60.000 0.00 0.00 42.08 3.51
2691 8310 1.987855 GAGGTCCACCGTCCATCCA 60.988 63.158 0.00 0.00 42.08 3.41
2692 8311 1.537889 AGGTCCACCGTCCATCCAA 60.538 57.895 0.00 0.00 42.08 3.53
2693 8312 0.914417 AGGTCCACCGTCCATCCAAT 60.914 55.000 0.00 0.00 42.08 3.16
2701 8320 1.475751 CCGTCCATCCAATCCTCCAAG 60.476 57.143 0.00 0.00 0.00 3.61
2703 8322 1.213926 GTCCATCCAATCCTCCAAGCT 59.786 52.381 0.00 0.00 0.00 3.74
2710 8329 4.703897 TCCAATCCTCCAAGCTATAAACG 58.296 43.478 0.00 0.00 0.00 3.60
2727 8346 4.415783 GGGAAAACCGACATGGCT 57.584 55.556 0.00 0.00 43.94 4.75
2735 8354 2.480555 CGACATGGCTTGTTCGGC 59.519 61.111 7.51 0.00 39.18 5.54
2741 8360 0.962356 ATGGCTTGTTCGGCTGGAAG 60.962 55.000 0.00 0.00 34.69 3.46
2742 8361 1.302511 GGCTTGTTCGGCTGGAAGA 60.303 57.895 0.00 0.00 34.69 2.87
2743 8362 0.678048 GGCTTGTTCGGCTGGAAGAT 60.678 55.000 0.00 0.00 34.69 2.40
2744 8363 1.168714 GCTTGTTCGGCTGGAAGATT 58.831 50.000 0.00 0.00 34.69 2.40
2745 8364 1.541588 GCTTGTTCGGCTGGAAGATTT 59.458 47.619 0.00 0.00 34.69 2.17
2746 8365 2.414691 GCTTGTTCGGCTGGAAGATTTC 60.415 50.000 0.00 0.00 34.69 2.17
2757 8376 2.000447 GGAAGATTTCCGTTGGAGTCG 59.000 52.381 0.00 0.00 40.59 4.18
2759 8378 0.391263 AGATTTCCGTTGGAGTCGCC 60.391 55.000 0.00 0.00 31.21 5.54
2760 8379 1.693083 GATTTCCGTTGGAGTCGCCG 61.693 60.000 0.00 0.00 40.66 6.46
2761 8380 2.162338 ATTTCCGTTGGAGTCGCCGA 62.162 55.000 0.00 0.00 40.66 5.54
2762 8381 2.366480 TTTCCGTTGGAGTCGCCGAA 62.366 55.000 0.00 0.00 40.66 4.30
2763 8382 2.356553 CCGTTGGAGTCGCCGAAA 60.357 61.111 0.00 0.00 40.66 3.46
2767 8386 1.223187 GTTGGAGTCGCCGAAAAAGA 58.777 50.000 0.00 0.00 40.66 2.52
2800 8443 4.280494 CCACGGAGATACGCGGGG 62.280 72.222 12.47 0.00 37.37 5.73
2802 8445 4.828296 ACGGAGATACGCGGGGGT 62.828 66.667 12.47 0.00 37.37 4.95
2803 8446 4.280494 CGGAGATACGCGGGGGTG 62.280 72.222 12.47 0.00 0.00 4.61
2805 8448 2.106332 GAGATACGCGGGGGTGTG 59.894 66.667 12.47 0.00 0.00 3.82
2807 8450 4.540735 GATACGCGGGGGTGTGGG 62.541 72.222 12.47 0.00 0.00 4.61
2815 8458 3.966543 GGGGTGTGGGTGGGTCTG 61.967 72.222 0.00 0.00 0.00 3.51
2816 8459 4.660938 GGGTGTGGGTGGGTCTGC 62.661 72.222 0.00 0.00 0.00 4.26
2820 8463 3.948719 GTGGGTGGGTCTGCCGAA 61.949 66.667 0.00 0.00 34.97 4.30
2821 8464 3.172106 TGGGTGGGTCTGCCGAAA 61.172 61.111 0.00 0.00 34.97 3.46
2822 8465 2.671963 GGGTGGGTCTGCCGAAAC 60.672 66.667 0.00 0.00 34.97 2.78
2823 8466 2.671963 GGTGGGTCTGCCGAAACC 60.672 66.667 0.00 0.00 34.97 3.27
2852 8495 3.781307 CCTGGCCGTTGGATCCGA 61.781 66.667 7.39 1.27 0.00 4.55
2853 8496 2.267642 CTGGCCGTTGGATCCGAA 59.732 61.111 2.22 0.00 0.00 4.30
2867 8510 2.431942 CGAAACGGACGGAGGGTG 60.432 66.667 0.00 0.00 0.00 4.61
2868 8511 2.741211 GAAACGGACGGAGGGTGC 60.741 66.667 0.00 0.00 0.00 5.01
2885 8528 4.831307 CGACGCGCTCGCCTAACT 62.831 66.667 5.73 0.00 39.84 2.24
2888 8531 2.951745 CGCGCTCGCCTAACTGAG 60.952 66.667 5.56 0.00 37.98 3.35
2941 8598 3.409856 GCGTACTACCGCGTCCTA 58.590 61.111 4.92 0.00 44.69 2.94
2942 8599 1.010685 GCGTACTACCGCGTCCTAC 60.011 63.158 4.92 0.00 44.69 3.18
2943 8600 1.273887 CGTACTACCGCGTCCTACG 59.726 63.158 4.92 6.91 45.88 3.51
2944 8601 1.421410 CGTACTACCGCGTCCTACGT 61.421 60.000 4.92 0.00 44.73 3.57
2945 8602 0.301987 GTACTACCGCGTCCTACGTC 59.698 60.000 4.92 0.00 44.73 4.34
2946 8603 0.108377 TACTACCGCGTCCTACGTCA 60.108 55.000 4.92 0.00 44.73 4.35
2947 8604 0.745845 ACTACCGCGTCCTACGTCAT 60.746 55.000 4.92 0.00 44.73 3.06
2948 8605 0.041488 CTACCGCGTCCTACGTCATC 60.041 60.000 4.92 0.00 44.73 2.92
2949 8606 0.744057 TACCGCGTCCTACGTCATCA 60.744 55.000 4.92 0.00 44.73 3.07
2950 8607 1.298413 CCGCGTCCTACGTCATCAG 60.298 63.158 4.92 0.00 44.73 2.90
2951 8608 1.712018 CCGCGTCCTACGTCATCAGA 61.712 60.000 4.92 0.00 44.73 3.27
2952 8609 0.589229 CGCGTCCTACGTCATCAGAC 60.589 60.000 0.00 0.00 44.73 3.51
2953 8610 0.450583 GCGTCCTACGTCATCAGACA 59.549 55.000 0.00 0.00 45.23 3.41
2954 8611 1.135489 GCGTCCTACGTCATCAGACAA 60.135 52.381 0.00 0.00 45.23 3.18
2955 8612 2.786854 CGTCCTACGTCATCAGACAAG 58.213 52.381 0.00 0.00 45.23 3.16
2956 8613 2.161808 CGTCCTACGTCATCAGACAAGT 59.838 50.000 0.00 0.00 45.23 3.16
2957 8614 3.373130 CGTCCTACGTCATCAGACAAGTA 59.627 47.826 0.00 0.00 45.23 2.24
2958 8615 4.142752 CGTCCTACGTCATCAGACAAGTAA 60.143 45.833 0.00 0.00 45.23 2.24
2959 8616 5.333513 GTCCTACGTCATCAGACAAGTAAG 58.666 45.833 0.00 0.00 45.23 2.34
2960 8617 4.398358 TCCTACGTCATCAGACAAGTAAGG 59.602 45.833 0.00 0.00 45.23 2.69
2961 8618 4.398358 CCTACGTCATCAGACAAGTAAGGA 59.602 45.833 0.00 0.00 45.23 3.36
2962 8619 4.175787 ACGTCATCAGACAAGTAAGGAC 57.824 45.455 0.00 0.00 45.23 3.85
2963 8620 3.572682 ACGTCATCAGACAAGTAAGGACA 59.427 43.478 0.00 0.00 45.23 4.02
2964 8621 4.220821 ACGTCATCAGACAAGTAAGGACAT 59.779 41.667 0.00 0.00 45.23 3.06
2965 8622 4.564372 CGTCATCAGACAAGTAAGGACATG 59.436 45.833 0.00 0.00 45.23 3.21
2966 8623 5.482908 GTCATCAGACAAGTAAGGACATGT 58.517 41.667 0.00 0.00 44.34 3.21
2967 8624 6.625081 CGTCATCAGACAAGTAAGGACATGTA 60.625 42.308 0.00 0.00 45.23 2.29
2968 8625 6.531948 GTCATCAGACAAGTAAGGACATGTAC 59.468 42.308 0.00 0.00 44.34 2.90
2969 8626 6.210584 TCATCAGACAAGTAAGGACATGTACA 59.789 38.462 11.55 0.00 37.62 2.90
2970 8627 6.413783 TCAGACAAGTAAGGACATGTACAA 57.586 37.500 11.55 0.00 37.62 2.41
2971 8628 7.004555 TCAGACAAGTAAGGACATGTACAAT 57.995 36.000 11.55 0.82 37.62 2.71
2972 8629 6.873605 TCAGACAAGTAAGGACATGTACAATG 59.126 38.462 11.55 5.90 37.62 2.82
2973 8630 6.873605 CAGACAAGTAAGGACATGTACAATGA 59.126 38.462 11.55 0.00 37.62 2.57
2974 8631 7.550551 CAGACAAGTAAGGACATGTACAATGAT 59.449 37.037 11.55 0.00 37.62 2.45
2975 8632 7.550551 AGACAAGTAAGGACATGTACAATGATG 59.449 37.037 11.55 6.26 37.62 3.07
2976 8633 7.394016 ACAAGTAAGGACATGTACAATGATGA 58.606 34.615 11.55 0.00 35.78 2.92
2977 8634 8.049117 ACAAGTAAGGACATGTACAATGATGAT 58.951 33.333 11.55 0.00 35.78 2.45
2978 8635 8.340443 CAAGTAAGGACATGTACAATGATGATG 58.660 37.037 11.55 0.00 0.00 3.07
2979 8636 7.795047 AGTAAGGACATGTACAATGATGATGA 58.205 34.615 11.55 0.00 0.00 2.92
2980 8637 6.932356 AAGGACATGTACAATGATGATGAC 57.068 37.500 11.55 0.00 0.00 3.06
2981 8638 5.993055 AGGACATGTACAATGATGATGACA 58.007 37.500 11.55 0.00 0.00 3.58
2982 8639 6.598503 AGGACATGTACAATGATGATGACAT 58.401 36.000 11.55 0.00 39.67 3.06
2983 8640 7.738847 AGGACATGTACAATGATGATGACATA 58.261 34.615 11.55 0.00 36.82 2.29
2984 8641 8.380867 AGGACATGTACAATGATGATGACATAT 58.619 33.333 11.55 0.00 36.82 1.78
2985 8642 8.448615 GGACATGTACAATGATGATGACATATG 58.551 37.037 2.19 0.00 36.82 1.78
2986 8643 8.331730 ACATGTACAATGATGATGACATATGG 57.668 34.615 7.80 0.00 36.82 2.74
2987 8644 8.158789 ACATGTACAATGATGATGACATATGGA 58.841 33.333 7.80 0.00 36.82 3.41
2988 8645 9.174166 CATGTACAATGATGATGACATATGGAT 57.826 33.333 7.80 0.00 36.82 3.41
2990 8647 9.657419 TGTACAATGATGATGACATATGGATAC 57.343 33.333 7.80 0.00 36.82 2.24
2991 8648 9.657419 GTACAATGATGATGACATATGGATACA 57.343 33.333 7.80 2.83 44.42 2.29
2993 8650 9.577222 ACAATGATGATGACATATGGATACAAA 57.423 29.630 7.80 0.00 43.80 2.83
2996 8653 8.047413 TGATGATGACATATGGATACAAATGC 57.953 34.615 7.80 0.00 43.80 3.56
2997 8654 7.121611 TGATGATGACATATGGATACAAATGCC 59.878 37.037 7.80 0.00 43.80 4.40
2998 8655 7.338703 GATGATGACATATGGATACAAATGCCT 59.661 37.037 7.80 0.00 43.80 4.75
3034 8691 9.507329 AAATAGAGTTAAAATCACTTGCTGAGA 57.493 29.630 0.00 0.00 30.20 3.27
3035 8692 9.507329 AATAGAGTTAAAATCACTTGCTGAGAA 57.493 29.630 0.00 0.00 30.20 2.87
3036 8693 7.992754 AGAGTTAAAATCACTTGCTGAGAAT 57.007 32.000 0.00 0.00 30.20 2.40
3038 8695 9.678260 AGAGTTAAAATCACTTGCTGAGAATAT 57.322 29.630 0.00 0.00 30.20 1.28
3039 8696 9.713740 GAGTTAAAATCACTTGCTGAGAATATG 57.286 33.333 0.00 0.00 30.20 1.78
3040 8697 9.453572 AGTTAAAATCACTTGCTGAGAATATGA 57.546 29.630 0.00 0.00 30.20 2.15
3043 8700 6.879276 AATCACTTGCTGAGAATATGATGG 57.121 37.500 0.00 0.00 30.20 3.51
3044 8701 5.363562 TCACTTGCTGAGAATATGATGGT 57.636 39.130 0.00 0.00 0.00 3.55
3045 8702 5.748402 TCACTTGCTGAGAATATGATGGTT 58.252 37.500 0.00 0.00 0.00 3.67
3046 8703 6.182627 TCACTTGCTGAGAATATGATGGTTT 58.817 36.000 0.00 0.00 0.00 3.27
3047 8704 6.094464 TCACTTGCTGAGAATATGATGGTTTG 59.906 38.462 0.00 0.00 0.00 2.93
3048 8705 5.359009 ACTTGCTGAGAATATGATGGTTTGG 59.641 40.000 0.00 0.00 0.00 3.28
3049 8706 4.858850 TGCTGAGAATATGATGGTTTGGT 58.141 39.130 0.00 0.00 0.00 3.67
3050 8707 4.883585 TGCTGAGAATATGATGGTTTGGTC 59.116 41.667 0.00 0.00 0.00 4.02
3051 8708 4.276926 GCTGAGAATATGATGGTTTGGTCC 59.723 45.833 0.00 0.00 0.00 4.46
3052 8709 5.688807 CTGAGAATATGATGGTTTGGTCCT 58.311 41.667 0.00 0.00 0.00 3.85
3053 8710 6.688922 GCTGAGAATATGATGGTTTGGTCCTA 60.689 42.308 0.00 0.00 0.00 2.94
3054 8711 6.830912 TGAGAATATGATGGTTTGGTCCTAG 58.169 40.000 0.00 0.00 0.00 3.02
3055 8712 6.615316 TGAGAATATGATGGTTTGGTCCTAGA 59.385 38.462 0.00 0.00 0.00 2.43
3056 8713 7.127186 TGAGAATATGATGGTTTGGTCCTAGAA 59.873 37.037 0.00 0.00 0.00 2.10
3057 8714 7.283329 AGAATATGATGGTTTGGTCCTAGAAC 58.717 38.462 0.00 0.00 0.00 3.01
3058 8715 6.831664 ATATGATGGTTTGGTCCTAGAACT 57.168 37.500 0.00 0.00 0.00 3.01
3059 8716 4.993705 TGATGGTTTGGTCCTAGAACTT 57.006 40.909 0.00 0.00 0.00 2.66
3060 8717 4.651778 TGATGGTTTGGTCCTAGAACTTG 58.348 43.478 0.00 0.00 0.00 3.16
3061 8718 4.104102 TGATGGTTTGGTCCTAGAACTTGT 59.896 41.667 0.00 0.00 0.00 3.16
3062 8719 5.308497 TGATGGTTTGGTCCTAGAACTTGTA 59.692 40.000 0.00 0.00 0.00 2.41
3063 8720 5.633655 TGGTTTGGTCCTAGAACTTGTAA 57.366 39.130 0.00 0.00 0.00 2.41
3064 8721 6.003859 TGGTTTGGTCCTAGAACTTGTAAA 57.996 37.500 0.00 0.00 0.00 2.01
3065 8722 6.424883 TGGTTTGGTCCTAGAACTTGTAAAA 58.575 36.000 0.00 0.00 0.00 1.52
3066 8723 7.064229 TGGTTTGGTCCTAGAACTTGTAAAAT 58.936 34.615 0.00 0.00 0.00 1.82
3067 8724 7.013846 TGGTTTGGTCCTAGAACTTGTAAAATG 59.986 37.037 0.00 0.00 0.00 2.32
3068 8725 7.229907 GGTTTGGTCCTAGAACTTGTAAAATGA 59.770 37.037 0.00 0.00 0.00 2.57
3069 8726 7.739498 TTGGTCCTAGAACTTGTAAAATGAC 57.261 36.000 0.00 0.00 0.00 3.06
3070 8727 6.235664 TGGTCCTAGAACTTGTAAAATGACC 58.764 40.000 0.00 0.00 39.14 4.02
3071 8728 5.646793 GGTCCTAGAACTTGTAAAATGACCC 59.353 44.000 0.00 0.00 33.99 4.46
3072 8729 6.473758 GTCCTAGAACTTGTAAAATGACCCT 58.526 40.000 0.00 0.00 0.00 4.34
3073 8730 7.310858 GGTCCTAGAACTTGTAAAATGACCCTA 60.311 40.741 0.00 0.00 33.99 3.53
3074 8731 8.265764 GTCCTAGAACTTGTAAAATGACCCTAT 58.734 37.037 0.00 0.00 0.00 2.57
3075 8732 8.832735 TCCTAGAACTTGTAAAATGACCCTATT 58.167 33.333 0.00 0.00 0.00 1.73
3076 8733 9.110502 CCTAGAACTTGTAAAATGACCCTATTC 57.889 37.037 0.00 0.00 0.00 1.75
3077 8734 9.667107 CTAGAACTTGTAAAATGACCCTATTCA 57.333 33.333 0.00 0.00 0.00 2.57
3078 8735 8.567285 AGAACTTGTAAAATGACCCTATTCAG 57.433 34.615 0.00 0.00 0.00 3.02
3079 8736 8.164070 AGAACTTGTAAAATGACCCTATTCAGT 58.836 33.333 0.00 0.00 0.00 3.41
3080 8737 7.923414 ACTTGTAAAATGACCCTATTCAGTC 57.077 36.000 0.00 0.00 0.00 3.51
3081 8738 6.884836 ACTTGTAAAATGACCCTATTCAGTCC 59.115 38.462 0.00 0.00 31.76 3.85
3082 8739 5.751586 TGTAAAATGACCCTATTCAGTCCC 58.248 41.667 0.00 0.00 31.76 4.46
3083 8740 4.946160 AAAATGACCCTATTCAGTCCCA 57.054 40.909 0.00 0.00 31.76 4.37
3084 8741 3.933861 AATGACCCTATTCAGTCCCAC 57.066 47.619 0.00 0.00 31.76 4.61
3085 8742 2.335681 TGACCCTATTCAGTCCCACA 57.664 50.000 0.00 0.00 31.76 4.17
3086 8743 2.626785 TGACCCTATTCAGTCCCACAA 58.373 47.619 0.00 0.00 31.76 3.33
3087 8744 2.304761 TGACCCTATTCAGTCCCACAAC 59.695 50.000 0.00 0.00 31.76 3.32
3088 8745 2.572104 GACCCTATTCAGTCCCACAACT 59.428 50.000 0.00 0.00 0.00 3.16
3089 8746 2.986728 ACCCTATTCAGTCCCACAACTT 59.013 45.455 0.00 0.00 0.00 2.66
3090 8747 3.244911 ACCCTATTCAGTCCCACAACTTG 60.245 47.826 0.00 0.00 0.00 3.16
3091 8748 2.749621 CCTATTCAGTCCCACAACTTGC 59.250 50.000 0.00 0.00 0.00 4.01
3092 8749 2.363306 ATTCAGTCCCACAACTTGCA 57.637 45.000 0.00 0.00 0.00 4.08
3093 8750 2.363306 TTCAGTCCCACAACTTGCAT 57.637 45.000 0.00 0.00 0.00 3.96
3094 8751 1.896220 TCAGTCCCACAACTTGCATC 58.104 50.000 0.00 0.00 0.00 3.91
3095 8752 1.142667 TCAGTCCCACAACTTGCATCA 59.857 47.619 0.00 0.00 0.00 3.07
3096 8753 1.955778 CAGTCCCACAACTTGCATCAA 59.044 47.619 0.00 0.00 0.00 2.57
3097 8754 2.361757 CAGTCCCACAACTTGCATCAAA 59.638 45.455 0.00 0.00 0.00 2.69
3098 8755 3.006110 CAGTCCCACAACTTGCATCAAAT 59.994 43.478 0.00 0.00 0.00 2.32
3099 8756 3.006110 AGTCCCACAACTTGCATCAAATG 59.994 43.478 0.00 0.00 0.00 2.32
3100 8757 2.964464 TCCCACAACTTGCATCAAATGT 59.036 40.909 0.00 0.00 0.00 2.71
3101 8758 3.061322 CCCACAACTTGCATCAAATGTG 58.939 45.455 13.63 13.63 39.15 3.21
3102 8759 2.477375 CCACAACTTGCATCAAATGTGC 59.523 45.455 14.51 0.00 38.63 4.57
3111 8768 4.752661 GCATCAAATGTGCAAATTTGGT 57.247 36.364 32.33 26.97 44.28 3.67
3112 8769 4.714851 GCATCAAATGTGCAAATTTGGTC 58.285 39.130 32.33 21.04 44.28 4.02
3113 8770 4.378666 GCATCAAATGTGCAAATTTGGTCC 60.379 41.667 32.33 19.22 44.28 4.46
3114 8771 4.686191 TCAAATGTGCAAATTTGGTCCT 57.314 36.364 32.33 3.19 44.28 3.85
3115 8772 4.378774 TCAAATGTGCAAATTTGGTCCTG 58.621 39.130 32.33 14.52 44.28 3.86
3116 8773 3.405823 AATGTGCAAATTTGGTCCTGG 57.594 42.857 19.47 0.00 0.00 4.45
3117 8774 2.079170 TGTGCAAATTTGGTCCTGGA 57.921 45.000 19.47 0.00 0.00 3.86
3118 8775 1.686052 TGTGCAAATTTGGTCCTGGAC 59.314 47.619 18.65 18.65 0.00 4.02
3119 8776 1.963515 GTGCAAATTTGGTCCTGGACT 59.036 47.619 25.01 3.57 32.47 3.85
3120 8777 3.153919 GTGCAAATTTGGTCCTGGACTA 58.846 45.455 25.01 17.77 32.47 2.59
3121 8778 3.572255 GTGCAAATTTGGTCCTGGACTAA 59.428 43.478 25.01 22.59 31.49 2.24
3122 8779 4.220602 GTGCAAATTTGGTCCTGGACTAAT 59.779 41.667 23.79 19.72 33.37 1.73
3123 8780 4.462483 TGCAAATTTGGTCCTGGACTAATC 59.538 41.667 23.79 9.78 33.37 1.75
3124 8781 4.462483 GCAAATTTGGTCCTGGACTAATCA 59.538 41.667 23.79 12.30 33.37 2.57
3125 8782 5.622233 GCAAATTTGGTCCTGGACTAATCAC 60.622 44.000 23.79 8.75 33.37 3.06
3126 8783 4.927267 ATTTGGTCCTGGACTAATCACA 57.073 40.909 23.79 11.29 33.37 3.58
3127 8784 3.981071 TTGGTCCTGGACTAATCACAG 57.019 47.619 25.01 0.00 28.49 3.66
3128 8785 3.184382 TGGTCCTGGACTAATCACAGA 57.816 47.619 25.01 0.00 34.21 3.41
3129 8786 3.516586 TGGTCCTGGACTAATCACAGAA 58.483 45.455 25.01 0.00 34.21 3.02
3130 8787 3.260884 TGGTCCTGGACTAATCACAGAAC 59.739 47.826 25.01 5.68 34.21 3.01
3131 8788 3.512680 GTCCTGGACTAATCACAGAACG 58.487 50.000 19.53 0.00 34.21 3.95
3132 8789 3.192844 GTCCTGGACTAATCACAGAACGA 59.807 47.826 19.53 0.00 34.21 3.85
3133 8790 3.192844 TCCTGGACTAATCACAGAACGAC 59.807 47.826 0.00 0.00 34.21 4.34
3134 8791 3.056821 CCTGGACTAATCACAGAACGACA 60.057 47.826 0.00 0.00 34.21 4.35
3135 8792 4.556233 CTGGACTAATCACAGAACGACAA 58.444 43.478 0.00 0.00 34.21 3.18
3136 8793 5.147330 TGGACTAATCACAGAACGACAAT 57.853 39.130 0.00 0.00 0.00 2.71
3137 8794 5.547465 TGGACTAATCACAGAACGACAATT 58.453 37.500 0.00 0.00 0.00 2.32
3138 8795 5.408299 TGGACTAATCACAGAACGACAATTG 59.592 40.000 3.24 3.24 0.00 2.32
3139 8796 5.163854 GGACTAATCACAGAACGACAATTGG 60.164 44.000 10.83 0.00 0.00 3.16
3140 8797 5.547465 ACTAATCACAGAACGACAATTGGA 58.453 37.500 10.83 0.00 0.00 3.53
3141 8798 4.749245 AATCACAGAACGACAATTGGAC 57.251 40.909 10.83 2.70 0.00 4.02
3142 8799 3.469008 TCACAGAACGACAATTGGACT 57.531 42.857 10.83 0.00 0.00 3.85
3143 8800 3.390135 TCACAGAACGACAATTGGACTC 58.610 45.455 10.83 0.00 0.00 3.36
3144 8801 2.155732 CACAGAACGACAATTGGACTCG 59.844 50.000 10.83 12.42 0.00 4.18
3145 8802 2.223971 ACAGAACGACAATTGGACTCGT 60.224 45.455 14.69 14.69 42.31 4.18
3146 8803 2.408704 CAGAACGACAATTGGACTCGTC 59.591 50.000 19.10 13.65 39.68 4.20
3147 8804 2.035449 AGAACGACAATTGGACTCGTCA 59.965 45.455 19.10 0.00 39.68 4.35
3148 8805 2.065993 ACGACAATTGGACTCGTCAG 57.934 50.000 14.69 1.06 35.82 3.51
3149 8806 1.336887 ACGACAATTGGACTCGTCAGG 60.337 52.381 14.69 0.00 35.82 3.86
3150 8807 1.079503 GACAATTGGACTCGTCAGGC 58.920 55.000 10.83 0.00 0.00 4.85
3175 8832 4.307908 GGTCAGCACGCGCGTTTT 62.308 61.111 35.90 21.72 45.49 2.43
3176 8833 2.351888 GTCAGCACGCGCGTTTTT 60.352 55.556 35.90 18.87 45.49 1.94
3196 8853 6.601741 TTTTTGCAAAACCATCACATTCTC 57.398 33.333 23.79 0.00 0.00 2.87
3197 8854 4.933505 TTGCAAAACCATCACATTCTCA 57.066 36.364 0.00 0.00 0.00 3.27
3198 8855 4.508461 TGCAAAACCATCACATTCTCAG 57.492 40.909 0.00 0.00 0.00 3.35
3199 8856 3.248266 GCAAAACCATCACATTCTCAGC 58.752 45.455 0.00 0.00 0.00 4.26
3200 8857 3.305539 GCAAAACCATCACATTCTCAGCA 60.306 43.478 0.00 0.00 0.00 4.41
3201 8858 4.796946 GCAAAACCATCACATTCTCAGCAA 60.797 41.667 0.00 0.00 0.00 3.91
3202 8859 4.778534 AAACCATCACATTCTCAGCAAG 57.221 40.909 0.00 0.00 0.00 4.01
3203 8860 3.430042 ACCATCACATTCTCAGCAAGT 57.570 42.857 0.00 0.00 0.00 3.16
3204 8861 3.759581 ACCATCACATTCTCAGCAAGTT 58.240 40.909 0.00 0.00 0.00 2.66
3205 8862 3.755378 ACCATCACATTCTCAGCAAGTTC 59.245 43.478 0.00 0.00 0.00 3.01
3206 8863 4.008330 CCATCACATTCTCAGCAAGTTCT 58.992 43.478 0.00 0.00 0.00 3.01
3207 8864 5.181009 CCATCACATTCTCAGCAAGTTCTA 58.819 41.667 0.00 0.00 0.00 2.10
3208 8865 5.293814 CCATCACATTCTCAGCAAGTTCTAG 59.706 44.000 0.00 0.00 0.00 2.43
3209 8866 4.825422 TCACATTCTCAGCAAGTTCTAGG 58.175 43.478 0.00 0.00 0.00 3.02
3210 8867 4.528206 TCACATTCTCAGCAAGTTCTAGGA 59.472 41.667 0.00 0.00 0.00 2.94
3211 8868 4.629200 CACATTCTCAGCAAGTTCTAGGAC 59.371 45.833 0.00 0.00 0.00 3.85
3212 8869 3.963428 TTCTCAGCAAGTTCTAGGACC 57.037 47.619 0.00 0.00 0.00 4.46
3213 8870 2.180276 TCTCAGCAAGTTCTAGGACCC 58.820 52.381 0.00 0.00 0.00 4.46
3214 8871 1.208293 CTCAGCAAGTTCTAGGACCCC 59.792 57.143 0.00 0.00 0.00 4.95
3215 8872 0.253327 CAGCAAGTTCTAGGACCCCC 59.747 60.000 0.00 0.00 0.00 5.40
3216 8873 1.221021 GCAAGTTCTAGGACCCCCG 59.779 63.158 0.00 0.00 37.58 5.73
3217 8874 1.905512 CAAGTTCTAGGACCCCCGG 59.094 63.158 0.00 0.00 37.58 5.73
3218 8875 0.908180 CAAGTTCTAGGACCCCCGGT 60.908 60.000 0.00 0.00 39.44 5.28
3219 8876 0.178882 AAGTTCTAGGACCCCCGGTT 60.179 55.000 0.00 0.00 35.25 4.44
3220 8877 0.178882 AGTTCTAGGACCCCCGGTTT 60.179 55.000 0.00 0.00 35.25 3.27
3221 8878 0.035725 GTTCTAGGACCCCCGGTTTG 60.036 60.000 0.00 0.00 35.25 2.93
3222 8879 0.178897 TTCTAGGACCCCCGGTTTGA 60.179 55.000 0.00 0.00 35.25 2.69
3223 8880 0.616679 TCTAGGACCCCCGGTTTGAG 60.617 60.000 0.00 0.00 35.25 3.02
3224 8881 1.614226 TAGGACCCCCGGTTTGAGG 60.614 63.158 0.00 0.00 35.25 3.86
3225 8882 4.735358 GGACCCCCGGTTTGAGGC 62.735 72.222 0.00 0.00 35.25 4.70
3226 8883 3.961414 GACCCCCGGTTTGAGGCA 61.961 66.667 0.00 0.00 35.25 4.75
3227 8884 3.264845 ACCCCCGGTTTGAGGCAT 61.265 61.111 0.00 0.00 27.29 4.40
3228 8885 2.440247 CCCCCGGTTTGAGGCATC 60.440 66.667 0.00 0.00 0.00 3.91
3229 8886 2.677228 CCCCGGTTTGAGGCATCT 59.323 61.111 0.00 0.00 0.00 2.90
3230 8887 1.632018 CCCCCGGTTTGAGGCATCTA 61.632 60.000 0.00 0.00 0.00 1.98
3231 8888 0.463833 CCCCGGTTTGAGGCATCTAC 60.464 60.000 0.00 0.00 0.00 2.59
3232 8889 0.251916 CCCGGTTTGAGGCATCTACA 59.748 55.000 0.00 0.00 0.00 2.74
3233 8890 1.134098 CCCGGTTTGAGGCATCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
3234 8891 2.643551 CCGGTTTGAGGCATCTACATT 58.356 47.619 0.00 0.00 0.00 2.71
3235 8892 3.016736 CCGGTTTGAGGCATCTACATTT 58.983 45.455 0.00 0.00 0.00 2.32
3236 8893 4.196193 CCGGTTTGAGGCATCTACATTTA 58.804 43.478 0.00 0.00 0.00 1.40
3237 8894 4.821805 CCGGTTTGAGGCATCTACATTTAT 59.178 41.667 0.00 0.00 0.00 1.40
3238 8895 5.299279 CCGGTTTGAGGCATCTACATTTATT 59.701 40.000 0.00 0.00 0.00 1.40
3239 8896 6.183360 CCGGTTTGAGGCATCTACATTTATTT 60.183 38.462 0.00 0.00 0.00 1.40
3240 8897 7.257722 CGGTTTGAGGCATCTACATTTATTTT 58.742 34.615 0.00 0.00 0.00 1.82
3241 8898 7.759433 CGGTTTGAGGCATCTACATTTATTTTT 59.241 33.333 0.00 0.00 0.00 1.94
3242 8899 9.087424 GGTTTGAGGCATCTACATTTATTTTTC 57.913 33.333 0.00 0.00 0.00 2.29
3243 8900 9.860898 GTTTGAGGCATCTACATTTATTTTTCT 57.139 29.630 0.00 0.00 0.00 2.52
3245 8902 9.466497 TTGAGGCATCTACATTTATTTTTCTCT 57.534 29.630 0.00 0.00 0.00 3.10
3246 8903 9.113838 TGAGGCATCTACATTTATTTTTCTCTC 57.886 33.333 0.00 0.00 0.00 3.20
3247 8904 8.457238 AGGCATCTACATTTATTTTTCTCTCC 57.543 34.615 0.00 0.00 0.00 3.71
3248 8905 7.503902 AGGCATCTACATTTATTTTTCTCTCCC 59.496 37.037 0.00 0.00 0.00 4.30
3249 8906 7.255625 GGCATCTACATTTATTTTTCTCTCCCC 60.256 40.741 0.00 0.00 0.00 4.81
3250 8907 7.285401 GCATCTACATTTATTTTTCTCTCCCCA 59.715 37.037 0.00 0.00 0.00 4.96
3251 8908 9.359653 CATCTACATTTATTTTTCTCTCCCCAT 57.640 33.333 0.00 0.00 0.00 4.00
3252 8909 9.942526 ATCTACATTTATTTTTCTCTCCCCATT 57.057 29.630 0.00 0.00 0.00 3.16
3253 8910 9.189156 TCTACATTTATTTTTCTCTCCCCATTG 57.811 33.333 0.00 0.00 0.00 2.82
3254 8911 6.643388 ACATTTATTTTTCTCTCCCCATTGC 58.357 36.000 0.00 0.00 0.00 3.56
3255 8912 6.213195 ACATTTATTTTTCTCTCCCCATTGCA 59.787 34.615 0.00 0.00 0.00 4.08
3256 8913 6.678568 TTTATTTTTCTCTCCCCATTGCAA 57.321 33.333 0.00 0.00 0.00 4.08
3257 8914 4.813750 ATTTTTCTCTCCCCATTGCAAG 57.186 40.909 4.94 0.00 0.00 4.01
3258 8915 1.549203 TTTCTCTCCCCATTGCAAGC 58.451 50.000 4.94 0.00 0.00 4.01
3259 8916 0.700564 TTCTCTCCCCATTGCAAGCT 59.299 50.000 4.94 0.00 0.00 3.74
3260 8917 1.583556 TCTCTCCCCATTGCAAGCTA 58.416 50.000 4.94 0.00 0.00 3.32
3261 8918 2.130193 TCTCTCCCCATTGCAAGCTAT 58.870 47.619 4.94 0.00 0.00 2.97
3262 8919 2.105477 TCTCTCCCCATTGCAAGCTATC 59.895 50.000 4.94 0.00 0.00 2.08
3263 8920 1.845791 TCTCCCCATTGCAAGCTATCA 59.154 47.619 4.94 0.00 0.00 2.15
3264 8921 2.444388 TCTCCCCATTGCAAGCTATCAT 59.556 45.455 4.94 0.00 0.00 2.45
3265 8922 3.117398 TCTCCCCATTGCAAGCTATCATT 60.117 43.478 4.94 0.00 0.00 2.57
3266 8923 4.104579 TCTCCCCATTGCAAGCTATCATTA 59.895 41.667 4.94 0.00 0.00 1.90
3267 8924 4.401022 TCCCCATTGCAAGCTATCATTAG 58.599 43.478 4.94 0.00 0.00 1.73
3268 8925 4.141181 TCCCCATTGCAAGCTATCATTAGT 60.141 41.667 4.94 0.00 0.00 2.24
3269 8926 4.022589 CCCCATTGCAAGCTATCATTAGTG 60.023 45.833 4.94 0.00 0.00 2.74
3270 8927 4.022589 CCCATTGCAAGCTATCATTAGTGG 60.023 45.833 4.94 2.72 0.00 4.00
3271 8928 4.022589 CCATTGCAAGCTATCATTAGTGGG 60.023 45.833 4.94 0.00 0.00 4.61
3272 8929 2.575532 TGCAAGCTATCATTAGTGGGC 58.424 47.619 0.00 0.00 0.00 5.36
3273 8930 1.882623 GCAAGCTATCATTAGTGGGCC 59.117 52.381 0.00 0.00 0.00 5.80
3274 8931 2.487986 GCAAGCTATCATTAGTGGGCCT 60.488 50.000 4.53 0.00 0.00 5.19
3275 8932 3.406764 CAAGCTATCATTAGTGGGCCTC 58.593 50.000 4.53 0.00 0.00 4.70
3276 8933 2.694397 AGCTATCATTAGTGGGCCTCA 58.306 47.619 4.53 0.00 0.00 3.86
3277 8934 3.254960 AGCTATCATTAGTGGGCCTCAT 58.745 45.455 4.53 0.00 0.00 2.90
3278 8935 3.008813 AGCTATCATTAGTGGGCCTCATG 59.991 47.826 4.53 2.17 0.00 3.07
3279 8936 3.008375 GCTATCATTAGTGGGCCTCATGA 59.992 47.826 4.53 8.06 38.00 3.07
3280 8937 4.505566 GCTATCATTAGTGGGCCTCATGAA 60.506 45.833 4.53 0.00 37.35 2.57
3281 8938 3.565764 TCATTAGTGGGCCTCATGAAG 57.434 47.619 4.53 0.00 32.20 3.02
3282 8939 3.114606 TCATTAGTGGGCCTCATGAAGA 58.885 45.455 4.53 0.00 32.20 2.87
3283 8940 3.523157 TCATTAGTGGGCCTCATGAAGAA 59.477 43.478 4.53 0.00 32.20 2.52
3284 8941 4.018506 TCATTAGTGGGCCTCATGAAGAAA 60.019 41.667 4.53 0.00 32.20 2.52
3285 8942 4.591321 TTAGTGGGCCTCATGAAGAAAT 57.409 40.909 4.53 0.00 0.00 2.17
3286 8943 5.708736 TTAGTGGGCCTCATGAAGAAATA 57.291 39.130 4.53 0.00 0.00 1.40
3287 8944 3.891049 AGTGGGCCTCATGAAGAAATAC 58.109 45.455 4.53 0.00 0.00 1.89
3288 8945 3.525199 AGTGGGCCTCATGAAGAAATACT 59.475 43.478 4.53 0.00 0.00 2.12
3289 8946 3.629398 GTGGGCCTCATGAAGAAATACTG 59.371 47.826 4.53 0.00 0.00 2.74
3290 8947 3.266772 TGGGCCTCATGAAGAAATACTGT 59.733 43.478 4.53 0.00 0.00 3.55
3291 8948 4.473196 TGGGCCTCATGAAGAAATACTGTA 59.527 41.667 4.53 0.00 0.00 2.74
3292 8949 5.059833 GGGCCTCATGAAGAAATACTGTAG 58.940 45.833 0.84 0.00 0.00 2.74
3293 8950 5.163301 GGGCCTCATGAAGAAATACTGTAGA 60.163 44.000 0.84 0.00 0.00 2.59
3294 8951 6.349300 GGCCTCATGAAGAAATACTGTAGAA 58.651 40.000 0.00 0.00 0.00 2.10
3295 8952 6.823689 GGCCTCATGAAGAAATACTGTAGAAA 59.176 38.462 0.00 0.00 0.00 2.52
3296 8953 7.336931 GGCCTCATGAAGAAATACTGTAGAAAA 59.663 37.037 0.00 0.00 0.00 2.29
3297 8954 8.897752 GCCTCATGAAGAAATACTGTAGAAAAT 58.102 33.333 0.00 0.00 0.00 1.82
3326 8983 9.967451 AGACTATAGTACACATGCATATCTACT 57.033 33.333 5.09 6.72 0.00 2.57
3332 8989 8.425577 AGTACACATGCATATCTACTTTTCAC 57.574 34.615 0.00 0.00 0.00 3.18
3333 8990 8.260818 AGTACACATGCATATCTACTTTTCACT 58.739 33.333 0.00 0.00 0.00 3.41
3334 8991 7.545362 ACACATGCATATCTACTTTTCACTC 57.455 36.000 0.00 0.00 0.00 3.51
3335 8992 6.540189 ACACATGCATATCTACTTTTCACTCC 59.460 38.462 0.00 0.00 0.00 3.85
3336 8993 6.539826 CACATGCATATCTACTTTTCACTCCA 59.460 38.462 0.00 0.00 0.00 3.86
3337 8994 7.066163 CACATGCATATCTACTTTTCACTCCAA 59.934 37.037 0.00 0.00 0.00 3.53
3338 8995 6.985188 TGCATATCTACTTTTCACTCCAAC 57.015 37.500 0.00 0.00 0.00 3.77
3339 8996 5.880332 TGCATATCTACTTTTCACTCCAACC 59.120 40.000 0.00 0.00 0.00 3.77
3340 8997 6.116126 GCATATCTACTTTTCACTCCAACCT 58.884 40.000 0.00 0.00 0.00 3.50
3341 8998 6.599638 GCATATCTACTTTTCACTCCAACCTT 59.400 38.462 0.00 0.00 0.00 3.50
3342 8999 7.121315 GCATATCTACTTTTCACTCCAACCTTT 59.879 37.037 0.00 0.00 0.00 3.11
3343 9000 9.014297 CATATCTACTTTTCACTCCAACCTTTT 57.986 33.333 0.00 0.00 0.00 2.27
3344 9001 6.937436 TCTACTTTTCACTCCAACCTTTTC 57.063 37.500 0.00 0.00 0.00 2.29
3345 9002 5.826208 TCTACTTTTCACTCCAACCTTTTCC 59.174 40.000 0.00 0.00 0.00 3.13
3346 9003 4.610333 ACTTTTCACTCCAACCTTTTCCT 58.390 39.130 0.00 0.00 0.00 3.36
3347 9004 5.023452 ACTTTTCACTCCAACCTTTTCCTT 58.977 37.500 0.00 0.00 0.00 3.36
3348 9005 5.483937 ACTTTTCACTCCAACCTTTTCCTTT 59.516 36.000 0.00 0.00 0.00 3.11
3349 9006 6.013725 ACTTTTCACTCCAACCTTTTCCTTTT 60.014 34.615 0.00 0.00 0.00 2.27
3350 9007 5.337578 TTCACTCCAACCTTTTCCTTTTG 57.662 39.130 0.00 0.00 0.00 2.44
3351 9008 4.605183 TCACTCCAACCTTTTCCTTTTGA 58.395 39.130 0.00 0.00 0.00 2.69
3352 9009 5.208121 TCACTCCAACCTTTTCCTTTTGAT 58.792 37.500 0.00 0.00 0.00 2.57
3353 9010 6.369629 TCACTCCAACCTTTTCCTTTTGATA 58.630 36.000 0.00 0.00 0.00 2.15
3354 9011 7.010160 TCACTCCAACCTTTTCCTTTTGATAT 58.990 34.615 0.00 0.00 0.00 1.63
3355 9012 7.176690 TCACTCCAACCTTTTCCTTTTGATATC 59.823 37.037 0.00 0.00 0.00 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.876309 ATTGGACAGGGTACTTTGTGT 57.124 42.857 7.39 0.00 0.00 3.72
72 73 2.452813 CGTCGGAGATGTTTGGCGG 61.453 63.158 0.00 0.00 40.67 6.13
77 78 3.328382 TTTCATCCGTCGGAGATGTTT 57.672 42.857 20.50 0.00 43.09 2.83
89 90 4.158384 CGTGGAAAGATTGTTTTCATCCG 58.842 43.478 0.00 0.00 38.51 4.18
100 101 0.250553 TTGACCGCCGTGGAAAGATT 60.251 50.000 4.58 0.00 42.00 2.40
124 130 4.728110 TTCTCGTCTCGCGGGGGA 62.728 66.667 5.94 0.00 42.39 4.81
128 134 0.247974 ACGTAATTCTCGTCTCGCGG 60.248 55.000 6.13 0.00 41.72 6.46
130 136 3.062901 CGTAAACGTAATTCTCGTCTCGC 60.063 47.826 8.61 1.65 40.69 5.03
152 158 0.575390 CGGATGATTGGAACGCGTAC 59.425 55.000 14.46 9.89 0.00 3.67
153 159 1.149361 GCGGATGATTGGAACGCGTA 61.149 55.000 14.46 0.00 40.84 4.42
154 160 2.461110 GCGGATGATTGGAACGCGT 61.461 57.895 5.58 5.58 40.84 6.01
205 219 2.307098 ACCCCAGAGAAATGGAGAACTG 59.693 50.000 0.00 0.00 43.57 3.16
206 220 2.637165 ACCCCAGAGAAATGGAGAACT 58.363 47.619 0.00 0.00 43.57 3.01
213 239 2.368221 TGGCAAAAACCCCAGAGAAATG 59.632 45.455 0.00 0.00 0.00 2.32
222 248 0.526211 GATCGACTGGCAAAAACCCC 59.474 55.000 0.00 0.00 0.00 4.95
226 252 1.270625 ACCTCGATCGACTGGCAAAAA 60.271 47.619 20.12 0.00 0.00 1.94
260 301 4.040198 AACCTCCCCTCCCCTCCC 62.040 72.222 0.00 0.00 0.00 4.30
261 302 2.692741 CAACCTCCCCTCCCCTCC 60.693 72.222 0.00 0.00 0.00 4.30
262 303 3.412408 GCAACCTCCCCTCCCCTC 61.412 72.222 0.00 0.00 0.00 4.30
299 340 2.943033 CGCCTTTTCGGAATGATAACCT 59.057 45.455 0.00 0.00 33.16 3.50
338 394 1.216710 CGTCAGTCAGGAAGGGAGC 59.783 63.158 0.00 0.00 0.00 4.70
356 418 1.202818 AGTGAGTGACTTTCCAAGCCC 60.203 52.381 0.00 0.00 0.00 5.19
416 483 3.364441 TGGCTTGCACGCATGTCC 61.364 61.111 17.72 8.59 0.00 4.02
1305 1396 3.449227 TCCACCAGCTCGCCGTAG 61.449 66.667 0.00 0.00 0.00 3.51
1362 1453 0.756903 ACTTGCAGTTGAGGTACCGT 59.243 50.000 6.18 0.00 0.00 4.83
2385 7841 8.910944 AGTAAAGCTAGTAATCAACTAATCGGA 58.089 33.333 0.00 0.00 40.21 4.55
2402 7858 9.620259 GGTTAACTCCTAGTACTAGTAAAGCTA 57.380 37.037 24.84 13.43 0.00 3.32
2403 7859 8.335484 AGGTTAACTCCTAGTACTAGTAAAGCT 58.665 37.037 24.84 20.21 35.87 3.74
2422 8000 3.376234 GGCCGGTTAAATCAGAGGTTAAC 59.624 47.826 1.90 0.00 38.78 2.01
2460 8038 4.279420 AGAAAGAACCAGAAACATCTTGGC 59.721 41.667 0.00 0.00 32.72 4.52
2474 8052 4.575885 TGTATGTACAGGCAGAAAGAACC 58.424 43.478 0.33 0.00 0.00 3.62
2484 8088 3.377485 TCTCTCGACTTGTATGTACAGGC 59.623 47.826 0.33 0.00 36.84 4.85
2501 8112 2.093467 GTGTTTGCTTGCGATCTCTCTC 59.907 50.000 0.00 0.00 0.00 3.20
2517 8128 5.828299 TTGGAACGAAAGAATCTGTGTTT 57.172 34.783 0.00 0.00 0.00 2.83
2543 8155 1.695813 GACGGCGATGAGATGAGATG 58.304 55.000 16.62 0.00 0.00 2.90
2544 8156 0.239613 CGACGGCGATGAGATGAGAT 59.760 55.000 16.62 0.00 40.82 2.75
2545 8157 1.095807 ACGACGGCGATGAGATGAGA 61.096 55.000 22.49 0.00 41.64 3.27
2546 8158 0.932123 CACGACGGCGATGAGATGAG 60.932 60.000 22.49 0.00 41.64 2.90
2547 8159 1.064134 CACGACGGCGATGAGATGA 59.936 57.895 22.49 0.00 41.64 2.92
2548 8160 0.802222 AACACGACGGCGATGAGATG 60.802 55.000 22.49 6.36 41.64 2.90
2549 8161 0.525668 GAACACGACGGCGATGAGAT 60.526 55.000 22.49 4.22 41.64 2.75
2550 8162 1.154093 GAACACGACGGCGATGAGA 60.154 57.895 22.49 0.00 41.64 3.27
2551 8163 1.154016 AGAACACGACGGCGATGAG 60.154 57.895 22.49 6.65 41.64 2.90
2557 8169 1.222115 AAGAAGCAGAACACGACGGC 61.222 55.000 0.00 0.00 0.00 5.68
2566 8178 1.208052 CCCGAGGATGAAGAAGCAGAA 59.792 52.381 0.00 0.00 0.00 3.02
2580 8192 3.385384 TGCAGAGCAGACCCGAGG 61.385 66.667 0.00 0.00 33.32 4.63
2589 8201 1.596203 GCTCACAGTGTGCAGAGCA 60.596 57.895 23.48 5.45 43.73 4.26
2590 8202 1.162181 TTGCTCACAGTGTGCAGAGC 61.162 55.000 25.09 22.27 45.78 4.09
2591 8203 1.197036 CATTGCTCACAGTGTGCAGAG 59.803 52.381 25.09 18.87 45.78 3.35
2593 8205 0.949397 ACATTGCTCACAGTGTGCAG 59.051 50.000 25.09 18.69 45.78 4.41
2609 8228 2.039480 ACTGATGTTCACTGGCTCACAT 59.961 45.455 0.00 0.00 32.41 3.21
2661 8280 3.497227 CGGTGGACCTCTTTCCCTTAAAA 60.497 47.826 0.00 0.00 34.33 1.52
2662 8281 2.039348 CGGTGGACCTCTTTCCCTTAAA 59.961 50.000 0.00 0.00 34.33 1.52
2663 8282 1.626825 CGGTGGACCTCTTTCCCTTAA 59.373 52.381 0.00 0.00 34.33 1.85
2664 8283 1.272807 CGGTGGACCTCTTTCCCTTA 58.727 55.000 0.00 0.00 34.33 2.69
2665 8284 0.767060 ACGGTGGACCTCTTTCCCTT 60.767 55.000 0.00 0.00 34.33 3.95
2666 8285 1.152096 ACGGTGGACCTCTTTCCCT 60.152 57.895 0.00 0.00 34.33 4.20
2667 8286 1.295746 GACGGTGGACCTCTTTCCC 59.704 63.158 0.00 0.00 34.33 3.97
2668 8287 1.295746 GGACGGTGGACCTCTTTCC 59.704 63.158 0.00 0.00 36.03 3.13
2669 8288 0.613777 ATGGACGGTGGACCTCTTTC 59.386 55.000 0.00 0.00 0.00 2.62
2670 8289 0.613777 GATGGACGGTGGACCTCTTT 59.386 55.000 0.00 0.00 0.00 2.52
2671 8290 1.265454 GGATGGACGGTGGACCTCTT 61.265 60.000 0.00 0.00 0.00 2.85
2672 8291 1.686110 GGATGGACGGTGGACCTCT 60.686 63.158 0.00 0.00 0.00 3.69
2673 8292 1.550130 TTGGATGGACGGTGGACCTC 61.550 60.000 0.00 0.00 0.00 3.85
2674 8293 0.914417 ATTGGATGGACGGTGGACCT 60.914 55.000 0.00 0.00 0.00 3.85
2675 8294 0.463833 GATTGGATGGACGGTGGACC 60.464 60.000 0.00 0.00 0.00 4.46
2676 8295 0.463833 GGATTGGATGGACGGTGGAC 60.464 60.000 0.00 0.00 0.00 4.02
2677 8296 0.620410 AGGATTGGATGGACGGTGGA 60.620 55.000 0.00 0.00 0.00 4.02
2678 8297 0.179045 GAGGATTGGATGGACGGTGG 60.179 60.000 0.00 0.00 0.00 4.61
2679 8298 0.179045 GGAGGATTGGATGGACGGTG 60.179 60.000 0.00 0.00 0.00 4.94
2680 8299 0.620410 TGGAGGATTGGATGGACGGT 60.620 55.000 0.00 0.00 0.00 4.83
2681 8300 0.546122 TTGGAGGATTGGATGGACGG 59.454 55.000 0.00 0.00 0.00 4.79
2682 8301 1.959042 CTTGGAGGATTGGATGGACG 58.041 55.000 0.00 0.00 0.00 4.79
2683 8302 1.213926 AGCTTGGAGGATTGGATGGAC 59.786 52.381 0.00 0.00 0.00 4.02
2684 8303 1.600058 AGCTTGGAGGATTGGATGGA 58.400 50.000 0.00 0.00 0.00 3.41
2685 8304 3.803186 ATAGCTTGGAGGATTGGATGG 57.197 47.619 0.00 0.00 0.00 3.51
2686 8305 5.180117 CGTTTATAGCTTGGAGGATTGGATG 59.820 44.000 0.00 0.00 0.00 3.51
2687 8306 5.308825 CGTTTATAGCTTGGAGGATTGGAT 58.691 41.667 0.00 0.00 0.00 3.41
2688 8307 4.444306 CCGTTTATAGCTTGGAGGATTGGA 60.444 45.833 0.00 0.00 0.00 3.53
2689 8308 3.815401 CCGTTTATAGCTTGGAGGATTGG 59.185 47.826 0.00 0.00 0.00 3.16
2690 8309 3.815401 CCCGTTTATAGCTTGGAGGATTG 59.185 47.826 0.00 0.00 0.00 2.67
2691 8310 3.714798 TCCCGTTTATAGCTTGGAGGATT 59.285 43.478 0.00 0.00 0.00 3.01
2692 8311 3.314693 TCCCGTTTATAGCTTGGAGGAT 58.685 45.455 0.00 0.00 0.00 3.24
2693 8312 2.754465 TCCCGTTTATAGCTTGGAGGA 58.246 47.619 0.00 0.00 0.00 3.71
2710 8329 0.243636 CAAGCCATGTCGGTTTTCCC 59.756 55.000 0.00 0.00 35.73 3.97
2723 8342 1.600636 CTTCCAGCCGAACAAGCCA 60.601 57.895 0.00 0.00 0.00 4.75
2726 8345 3.477899 GAAATCTTCCAGCCGAACAAG 57.522 47.619 0.00 0.00 0.00 3.16
2741 8360 1.693083 CGGCGACTCCAACGGAAATC 61.693 60.000 0.00 0.00 34.01 2.17
2742 8361 1.740296 CGGCGACTCCAACGGAAAT 60.740 57.895 0.00 0.00 34.01 2.17
2743 8362 2.356553 CGGCGACTCCAACGGAAA 60.357 61.111 0.00 0.00 34.01 3.13
2744 8363 2.366480 TTTCGGCGACTCCAACGGAA 62.366 55.000 10.16 0.00 34.01 4.30
2745 8364 2.366480 TTTTCGGCGACTCCAACGGA 62.366 55.000 10.16 0.00 34.01 4.69
2746 8365 1.500512 TTTTTCGGCGACTCCAACGG 61.501 55.000 10.16 0.00 34.01 4.44
2747 8366 0.110823 CTTTTTCGGCGACTCCAACG 60.111 55.000 10.16 0.00 34.01 4.10
2748 8367 1.194772 CTCTTTTTCGGCGACTCCAAC 59.805 52.381 10.16 0.00 34.01 3.77
2750 8369 0.320421 CCTCTTTTTCGGCGACTCCA 60.320 55.000 10.16 0.00 34.01 3.86
2751 8370 1.636570 GCCTCTTTTTCGGCGACTCC 61.637 60.000 10.16 0.00 36.45 3.85
2752 8371 1.788481 GCCTCTTTTTCGGCGACTC 59.212 57.895 10.16 0.00 36.45 3.36
2753 8372 3.967715 GCCTCTTTTTCGGCGACT 58.032 55.556 10.16 0.00 36.45 4.18
2757 8376 0.606673 AGGAGTGCCTCTTTTTCGGC 60.607 55.000 0.00 0.00 42.19 5.54
2759 8378 1.160137 CCAGGAGTGCCTCTTTTTCG 58.840 55.000 2.79 0.00 44.80 3.46
2760 8379 0.884514 GCCAGGAGTGCCTCTTTTTC 59.115 55.000 0.00 0.00 44.80 2.29
2761 8380 0.540597 GGCCAGGAGTGCCTCTTTTT 60.541 55.000 0.00 0.00 44.80 1.94
2762 8381 1.075659 GGCCAGGAGTGCCTCTTTT 59.924 57.895 0.00 0.00 44.80 2.27
2763 8382 2.759795 GGCCAGGAGTGCCTCTTT 59.240 61.111 0.00 0.00 44.80 2.52
2800 8443 4.660938 GGCAGACCCACCCACACC 62.661 72.222 0.00 0.00 0.00 4.16
2803 8446 3.485346 TTTCGGCAGACCCACCCAC 62.485 63.158 0.00 0.00 0.00 4.61
2805 8448 2.671963 GTTTCGGCAGACCCACCC 60.672 66.667 0.00 0.00 0.00 4.61
2836 8479 1.376683 TTTCGGATCCAACGGCCAG 60.377 57.895 13.41 0.00 0.00 4.85
2837 8480 1.673009 GTTTCGGATCCAACGGCCA 60.673 57.895 13.41 0.00 0.00 5.36
2850 8493 2.431942 CACCCTCCGTCCGTTTCG 60.432 66.667 0.00 0.00 0.00 3.46
2852 8495 4.675029 CGCACCCTCCGTCCGTTT 62.675 66.667 0.00 0.00 0.00 3.60
2936 8593 3.851976 ACTTGTCTGATGACGTAGGAC 57.148 47.619 0.00 0.00 45.70 3.85
2937 8594 4.398358 CCTTACTTGTCTGATGACGTAGGA 59.602 45.833 0.00 0.00 45.70 2.94
2938 8595 4.398358 TCCTTACTTGTCTGATGACGTAGG 59.602 45.833 0.00 0.00 45.70 3.18
2939 8596 5.106277 TGTCCTTACTTGTCTGATGACGTAG 60.106 44.000 0.00 0.00 45.70 3.51
2940 8597 4.763279 TGTCCTTACTTGTCTGATGACGTA 59.237 41.667 0.00 0.00 45.70 3.57
2941 8598 3.572682 TGTCCTTACTTGTCTGATGACGT 59.427 43.478 0.00 0.00 45.70 4.34
2942 8599 4.174411 TGTCCTTACTTGTCTGATGACG 57.826 45.455 0.00 0.00 45.70 4.35
2943 8600 5.482908 ACATGTCCTTACTTGTCTGATGAC 58.517 41.667 0.00 0.00 39.14 3.06
2944 8601 5.745312 ACATGTCCTTACTTGTCTGATGA 57.255 39.130 0.00 0.00 39.14 2.92
2945 8602 6.398095 TGTACATGTCCTTACTTGTCTGATG 58.602 40.000 0.00 0.00 41.60 3.07
2946 8603 6.605471 TGTACATGTCCTTACTTGTCTGAT 57.395 37.500 0.00 0.00 41.60 2.90
2947 8604 6.413783 TTGTACATGTCCTTACTTGTCTGA 57.586 37.500 0.00 0.00 41.60 3.27
2948 8605 6.873605 TCATTGTACATGTCCTTACTTGTCTG 59.126 38.462 0.00 0.00 41.60 3.51
2949 8606 7.004555 TCATTGTACATGTCCTTACTTGTCT 57.995 36.000 0.00 0.00 41.60 3.41
2950 8607 7.549134 TCATCATTGTACATGTCCTTACTTGTC 59.451 37.037 0.00 0.00 41.60 3.18
2951 8608 7.394016 TCATCATTGTACATGTCCTTACTTGT 58.606 34.615 0.00 0.00 43.94 3.16
2952 8609 7.848223 TCATCATTGTACATGTCCTTACTTG 57.152 36.000 0.00 0.00 36.94 3.16
2953 8610 8.267183 TCATCATCATTGTACATGTCCTTACTT 58.733 33.333 0.00 0.00 0.00 2.24
2954 8611 7.712639 GTCATCATCATTGTACATGTCCTTACT 59.287 37.037 0.00 0.00 0.00 2.24
2955 8612 7.495606 TGTCATCATCATTGTACATGTCCTTAC 59.504 37.037 0.00 0.00 0.00 2.34
2956 8613 7.563906 TGTCATCATCATTGTACATGTCCTTA 58.436 34.615 0.00 0.00 0.00 2.69
2957 8614 6.417258 TGTCATCATCATTGTACATGTCCTT 58.583 36.000 0.00 0.00 0.00 3.36
2958 8615 5.993055 TGTCATCATCATTGTACATGTCCT 58.007 37.500 0.00 0.00 0.00 3.85
2959 8616 6.872628 ATGTCATCATCATTGTACATGTCC 57.127 37.500 0.00 0.00 0.00 4.02
2960 8617 8.448615 CCATATGTCATCATCATTGTACATGTC 58.551 37.037 0.00 0.00 35.70 3.06
2961 8618 8.158789 TCCATATGTCATCATCATTGTACATGT 58.841 33.333 2.69 2.69 35.70 3.21
2962 8619 8.556213 TCCATATGTCATCATCATTGTACATG 57.444 34.615 0.00 0.00 35.70 3.21
2964 8621 9.657419 GTATCCATATGTCATCATCATTGTACA 57.343 33.333 1.24 0.00 35.70 2.90
2965 8622 9.657419 TGTATCCATATGTCATCATCATTGTAC 57.343 33.333 1.24 0.00 35.70 2.90
2967 8624 9.577222 TTTGTATCCATATGTCATCATCATTGT 57.423 29.630 1.24 0.00 35.70 2.71
2970 8627 8.683615 GCATTTGTATCCATATGTCATCATCAT 58.316 33.333 1.24 0.00 33.90 2.45
2971 8628 7.121611 GGCATTTGTATCCATATGTCATCATCA 59.878 37.037 1.24 0.00 35.49 3.07
2972 8629 7.338703 AGGCATTTGTATCCATATGTCATCATC 59.661 37.037 1.24 0.00 37.17 2.92
2973 8630 7.179966 AGGCATTTGTATCCATATGTCATCAT 58.820 34.615 1.24 0.00 37.17 2.45
2974 8631 6.545567 AGGCATTTGTATCCATATGTCATCA 58.454 36.000 1.24 0.00 37.17 3.07
2975 8632 7.458409 AAGGCATTTGTATCCATATGTCATC 57.542 36.000 1.24 0.00 37.17 2.92
2976 8633 8.963725 CATAAGGCATTTGTATCCATATGTCAT 58.036 33.333 1.24 0.00 37.17 3.06
2977 8634 8.162746 TCATAAGGCATTTGTATCCATATGTCA 58.837 33.333 1.24 0.00 37.17 3.58
2978 8635 8.454106 GTCATAAGGCATTTGTATCCATATGTC 58.546 37.037 1.24 0.00 35.60 3.06
2979 8636 7.944000 TGTCATAAGGCATTTGTATCCATATGT 59.056 33.333 1.24 0.00 34.76 2.29
2980 8637 8.339344 TGTCATAAGGCATTTGTATCCATATG 57.661 34.615 0.00 0.00 34.57 1.78
2981 8638 8.938801 TTGTCATAAGGCATTTGTATCCATAT 57.061 30.769 0.00 0.00 0.00 1.78
2982 8639 8.759481 TTTGTCATAAGGCATTTGTATCCATA 57.241 30.769 0.00 0.00 0.00 2.74
2983 8640 7.658525 TTTGTCATAAGGCATTTGTATCCAT 57.341 32.000 0.00 0.00 0.00 3.41
2984 8641 7.473735 TTTTGTCATAAGGCATTTGTATCCA 57.526 32.000 0.00 0.00 0.00 3.41
3008 8665 9.507329 TCTCAGCAAGTGATTTTAACTCTATTT 57.493 29.630 0.00 0.00 33.51 1.40
3009 8666 9.507329 TTCTCAGCAAGTGATTTTAACTCTATT 57.493 29.630 0.00 0.00 33.51 1.73
3010 8667 9.678260 ATTCTCAGCAAGTGATTTTAACTCTAT 57.322 29.630 0.00 0.00 33.51 1.98
3012 8669 7.992754 ATTCTCAGCAAGTGATTTTAACTCT 57.007 32.000 0.00 0.00 33.51 3.24
3013 8670 9.713740 CATATTCTCAGCAAGTGATTTTAACTC 57.286 33.333 0.00 0.00 33.51 3.01
3014 8671 9.453572 TCATATTCTCAGCAAGTGATTTTAACT 57.546 29.630 0.00 0.00 33.51 2.24
3017 8674 8.843262 CCATCATATTCTCAGCAAGTGATTTTA 58.157 33.333 0.00 0.00 33.51 1.52
3018 8675 7.341256 ACCATCATATTCTCAGCAAGTGATTTT 59.659 33.333 0.00 0.00 33.51 1.82
3019 8676 6.832384 ACCATCATATTCTCAGCAAGTGATTT 59.168 34.615 0.00 0.00 33.51 2.17
3020 8677 6.363065 ACCATCATATTCTCAGCAAGTGATT 58.637 36.000 0.00 0.00 33.51 2.57
3021 8678 5.938279 ACCATCATATTCTCAGCAAGTGAT 58.062 37.500 0.00 0.00 33.51 3.06
3022 8679 5.363562 ACCATCATATTCTCAGCAAGTGA 57.636 39.130 0.00 0.00 0.00 3.41
3023 8680 6.263344 CAAACCATCATATTCTCAGCAAGTG 58.737 40.000 0.00 0.00 0.00 3.16
3024 8681 5.359009 CCAAACCATCATATTCTCAGCAAGT 59.641 40.000 0.00 0.00 0.00 3.16
3025 8682 5.359009 ACCAAACCATCATATTCTCAGCAAG 59.641 40.000 0.00 0.00 0.00 4.01
3026 8683 5.263599 ACCAAACCATCATATTCTCAGCAA 58.736 37.500 0.00 0.00 0.00 3.91
3027 8684 4.858850 ACCAAACCATCATATTCTCAGCA 58.141 39.130 0.00 0.00 0.00 4.41
3028 8685 4.276926 GGACCAAACCATCATATTCTCAGC 59.723 45.833 0.00 0.00 0.00 4.26
3029 8686 5.688807 AGGACCAAACCATCATATTCTCAG 58.311 41.667 0.00 0.00 0.00 3.35
3030 8687 5.715439 AGGACCAAACCATCATATTCTCA 57.285 39.130 0.00 0.00 0.00 3.27
3031 8688 7.067496 TCTAGGACCAAACCATCATATTCTC 57.933 40.000 0.00 0.00 0.00 2.87
3032 8689 7.127955 AGTTCTAGGACCAAACCATCATATTCT 59.872 37.037 0.00 0.00 0.00 2.40
3033 8690 7.283329 AGTTCTAGGACCAAACCATCATATTC 58.717 38.462 0.00 0.00 0.00 1.75
3034 8691 7.213178 AGTTCTAGGACCAAACCATCATATT 57.787 36.000 0.00 0.00 0.00 1.28
3035 8692 6.831664 AGTTCTAGGACCAAACCATCATAT 57.168 37.500 0.00 0.00 0.00 1.78
3036 8693 6.012858 ACAAGTTCTAGGACCAAACCATCATA 60.013 38.462 0.00 0.00 0.00 2.15
3037 8694 5.222130 ACAAGTTCTAGGACCAAACCATCAT 60.222 40.000 0.00 0.00 0.00 2.45
3038 8695 4.104102 ACAAGTTCTAGGACCAAACCATCA 59.896 41.667 0.00 0.00 0.00 3.07
3039 8696 4.652822 ACAAGTTCTAGGACCAAACCATC 58.347 43.478 0.00 0.00 0.00 3.51
3040 8697 4.724279 ACAAGTTCTAGGACCAAACCAT 57.276 40.909 0.00 0.00 0.00 3.55
3041 8698 5.633655 TTACAAGTTCTAGGACCAAACCA 57.366 39.130 0.00 0.00 0.00 3.67
3042 8699 6.947644 TTTTACAAGTTCTAGGACCAAACC 57.052 37.500 0.00 0.00 0.00 3.27
3043 8700 8.074370 GTCATTTTACAAGTTCTAGGACCAAAC 58.926 37.037 0.00 0.00 0.00 2.93
3044 8701 7.229907 GGTCATTTTACAAGTTCTAGGACCAAA 59.770 37.037 0.00 0.00 40.50 3.28
3045 8702 6.713450 GGTCATTTTACAAGTTCTAGGACCAA 59.287 38.462 0.00 0.00 40.50 3.67
3046 8703 6.235664 GGTCATTTTACAAGTTCTAGGACCA 58.764 40.000 0.00 0.00 40.50 4.02
3047 8704 5.646793 GGGTCATTTTACAAGTTCTAGGACC 59.353 44.000 0.00 0.00 40.16 4.46
3048 8705 6.473758 AGGGTCATTTTACAAGTTCTAGGAC 58.526 40.000 0.00 0.00 0.00 3.85
3049 8706 6.697641 AGGGTCATTTTACAAGTTCTAGGA 57.302 37.500 0.00 0.00 0.00 2.94
3050 8707 9.110502 GAATAGGGTCATTTTACAAGTTCTAGG 57.889 37.037 0.00 0.00 0.00 3.02
3051 8708 9.667107 TGAATAGGGTCATTTTACAAGTTCTAG 57.333 33.333 0.00 0.00 0.00 2.43
3052 8709 9.667107 CTGAATAGGGTCATTTTACAAGTTCTA 57.333 33.333 0.00 0.00 0.00 2.10
3053 8710 8.164070 ACTGAATAGGGTCATTTTACAAGTTCT 58.836 33.333 0.00 0.00 0.00 3.01
3054 8711 8.336801 ACTGAATAGGGTCATTTTACAAGTTC 57.663 34.615 0.00 0.00 0.00 3.01
3055 8712 7.393515 GGACTGAATAGGGTCATTTTACAAGTT 59.606 37.037 0.00 0.00 34.49 2.66
3056 8713 6.884836 GGACTGAATAGGGTCATTTTACAAGT 59.115 38.462 0.00 0.00 34.49 3.16
3057 8714 6.318900 GGGACTGAATAGGGTCATTTTACAAG 59.681 42.308 0.00 0.00 34.49 3.16
3058 8715 6.184789 GGGACTGAATAGGGTCATTTTACAA 58.815 40.000 0.00 0.00 34.49 2.41
3059 8716 5.251932 TGGGACTGAATAGGGTCATTTTACA 59.748 40.000 0.00 0.00 34.49 2.41
3060 8717 5.589050 GTGGGACTGAATAGGGTCATTTTAC 59.411 44.000 0.00 0.00 34.49 2.01
3061 8718 5.251932 TGTGGGACTGAATAGGGTCATTTTA 59.748 40.000 0.00 0.00 34.49 1.52
3062 8719 4.044065 TGTGGGACTGAATAGGGTCATTTT 59.956 41.667 0.00 0.00 34.49 1.82
3063 8720 3.591527 TGTGGGACTGAATAGGGTCATTT 59.408 43.478 0.00 0.00 34.49 2.32
3064 8721 3.189606 TGTGGGACTGAATAGGGTCATT 58.810 45.455 0.00 0.00 34.49 2.57
3065 8722 2.845659 TGTGGGACTGAATAGGGTCAT 58.154 47.619 0.00 0.00 34.49 3.06
3066 8723 2.304761 GTTGTGGGACTGAATAGGGTCA 59.695 50.000 0.00 0.00 34.49 4.02
3067 8724 2.572104 AGTTGTGGGACTGAATAGGGTC 59.428 50.000 0.00 0.00 0.00 4.46
3068 8725 2.632537 AGTTGTGGGACTGAATAGGGT 58.367 47.619 0.00 0.00 0.00 4.34
3069 8726 3.347216 CAAGTTGTGGGACTGAATAGGG 58.653 50.000 0.00 0.00 0.00 3.53
3070 8727 2.749621 GCAAGTTGTGGGACTGAATAGG 59.250 50.000 4.48 0.00 0.00 2.57
3071 8728 3.411446 TGCAAGTTGTGGGACTGAATAG 58.589 45.455 4.48 0.00 0.00 1.73
3072 8729 3.500448 TGCAAGTTGTGGGACTGAATA 57.500 42.857 4.48 0.00 0.00 1.75
3073 8730 2.363306 TGCAAGTTGTGGGACTGAAT 57.637 45.000 4.48 0.00 0.00 2.57
3074 8731 2.229792 GATGCAAGTTGTGGGACTGAA 58.770 47.619 4.48 0.00 0.00 3.02
3075 8732 1.142667 TGATGCAAGTTGTGGGACTGA 59.857 47.619 4.48 0.00 0.00 3.41
3076 8733 1.608055 TGATGCAAGTTGTGGGACTG 58.392 50.000 4.48 0.00 0.00 3.51
3077 8734 2.363306 TTGATGCAAGTTGTGGGACT 57.637 45.000 4.48 0.00 0.00 3.85
3078 8735 3.243839 ACATTTGATGCAAGTTGTGGGAC 60.244 43.478 4.48 0.00 0.00 4.46
3079 8736 2.964464 ACATTTGATGCAAGTTGTGGGA 59.036 40.909 4.48 0.00 0.00 4.37
3080 8737 3.061322 CACATTTGATGCAAGTTGTGGG 58.939 45.455 4.48 0.00 36.54 4.61
3081 8738 2.477375 GCACATTTGATGCAAGTTGTGG 59.523 45.455 18.44 7.92 42.88 4.17
3082 8739 3.781341 GCACATTTGATGCAAGTTGTG 57.219 42.857 4.48 15.22 42.88 3.33
3090 8747 4.378666 GGACCAAATTTGCACATTTGATGC 60.379 41.667 30.66 20.66 43.99 3.91
3091 8748 4.998672 AGGACCAAATTTGCACATTTGATG 59.001 37.500 30.66 20.50 43.99 3.07
3092 8749 4.998672 CAGGACCAAATTTGCACATTTGAT 59.001 37.500 30.66 20.07 43.99 2.57
3093 8750 4.378774 CAGGACCAAATTTGCACATTTGA 58.621 39.130 30.66 0.00 43.99 2.69
3094 8751 3.499157 CCAGGACCAAATTTGCACATTTG 59.501 43.478 24.92 24.92 41.86 2.32
3095 8752 3.390639 TCCAGGACCAAATTTGCACATTT 59.609 39.130 12.92 4.98 0.00 2.32
3096 8753 2.971330 TCCAGGACCAAATTTGCACATT 59.029 40.909 12.92 0.00 0.00 2.71
3097 8754 2.299867 GTCCAGGACCAAATTTGCACAT 59.700 45.455 12.92 3.69 0.00 3.21
3098 8755 1.686052 GTCCAGGACCAAATTTGCACA 59.314 47.619 12.92 0.00 0.00 4.57
3099 8756 1.963515 AGTCCAGGACCAAATTTGCAC 59.036 47.619 16.72 8.24 32.18 4.57
3100 8757 2.380064 AGTCCAGGACCAAATTTGCA 57.620 45.000 16.72 0.00 32.18 4.08
3101 8758 4.462483 TGATTAGTCCAGGACCAAATTTGC 59.538 41.667 16.72 5.89 32.18 3.68
3102 8759 5.476599 TGTGATTAGTCCAGGACCAAATTTG 59.523 40.000 16.72 11.40 32.18 2.32
3103 8760 5.640147 TGTGATTAGTCCAGGACCAAATTT 58.360 37.500 16.72 0.00 32.18 1.82
3104 8761 5.014123 TCTGTGATTAGTCCAGGACCAAATT 59.986 40.000 16.72 0.00 32.18 1.82
3105 8762 4.536090 TCTGTGATTAGTCCAGGACCAAAT 59.464 41.667 16.72 15.65 32.18 2.32
3106 8763 3.907474 TCTGTGATTAGTCCAGGACCAAA 59.093 43.478 16.72 11.44 32.18 3.28
3107 8764 3.516586 TCTGTGATTAGTCCAGGACCAA 58.483 45.455 16.72 9.68 32.18 3.67
3108 8765 3.184382 TCTGTGATTAGTCCAGGACCA 57.816 47.619 16.72 0.00 32.18 4.02
3109 8766 3.676324 CGTTCTGTGATTAGTCCAGGACC 60.676 52.174 16.72 1.07 32.14 4.46
3110 8767 3.192844 TCGTTCTGTGATTAGTCCAGGAC 59.807 47.826 12.25 12.25 32.32 3.85
3111 8768 3.192844 GTCGTTCTGTGATTAGTCCAGGA 59.807 47.826 0.00 0.00 0.00 3.86
3112 8769 3.056821 TGTCGTTCTGTGATTAGTCCAGG 60.057 47.826 4.64 0.00 0.00 4.45
3113 8770 4.174411 TGTCGTTCTGTGATTAGTCCAG 57.826 45.455 0.00 0.00 0.00 3.86
3114 8771 4.594123 TTGTCGTTCTGTGATTAGTCCA 57.406 40.909 0.00 0.00 0.00 4.02
3115 8772 5.163854 CCAATTGTCGTTCTGTGATTAGTCC 60.164 44.000 4.43 0.00 0.00 3.85
3116 8773 5.637810 TCCAATTGTCGTTCTGTGATTAGTC 59.362 40.000 4.43 0.00 0.00 2.59
3117 8774 5.408604 GTCCAATTGTCGTTCTGTGATTAGT 59.591 40.000 4.43 0.00 0.00 2.24
3118 8775 5.639506 AGTCCAATTGTCGTTCTGTGATTAG 59.360 40.000 4.43 0.00 0.00 1.73
3119 8776 5.547465 AGTCCAATTGTCGTTCTGTGATTA 58.453 37.500 4.43 0.00 0.00 1.75
3120 8777 4.389374 AGTCCAATTGTCGTTCTGTGATT 58.611 39.130 4.43 0.00 0.00 2.57
3121 8778 3.997021 GAGTCCAATTGTCGTTCTGTGAT 59.003 43.478 4.43 0.00 0.00 3.06
3122 8779 3.390135 GAGTCCAATTGTCGTTCTGTGA 58.610 45.455 4.43 0.00 0.00 3.58
3123 8780 2.155732 CGAGTCCAATTGTCGTTCTGTG 59.844 50.000 4.43 0.00 0.00 3.66
3124 8781 2.223971 ACGAGTCCAATTGTCGTTCTGT 60.224 45.455 14.69 0.00 44.24 3.41
3125 8782 2.404215 ACGAGTCCAATTGTCGTTCTG 58.596 47.619 14.69 0.00 44.24 3.02
3126 8783 2.035449 TGACGAGTCCAATTGTCGTTCT 59.965 45.455 19.61 4.88 46.49 3.01
3127 8784 2.400399 TGACGAGTCCAATTGTCGTTC 58.600 47.619 19.61 14.22 46.49 3.95
3128 8785 2.404215 CTGACGAGTCCAATTGTCGTT 58.596 47.619 19.61 7.55 46.49 3.85
3130 8787 1.350193 CCTGACGAGTCCAATTGTCG 58.650 55.000 13.56 13.56 36.52 4.35
3131 8788 1.079503 GCCTGACGAGTCCAATTGTC 58.920 55.000 4.43 0.00 34.63 3.18
3132 8789 0.321653 GGCCTGACGAGTCCAATTGT 60.322 55.000 4.43 0.00 0.00 2.71
3133 8790 1.026718 GGGCCTGACGAGTCCAATTG 61.027 60.000 0.84 0.00 0.00 2.32
3134 8791 1.299976 GGGCCTGACGAGTCCAATT 59.700 57.895 0.84 0.00 0.00 2.32
3135 8792 2.990479 GGGCCTGACGAGTCCAAT 59.010 61.111 0.84 0.00 0.00 3.16
3136 8793 3.691342 CGGGCCTGACGAGTCCAA 61.691 66.667 5.28 0.00 0.00 3.53
3137 8794 4.671590 TCGGGCCTGACGAGTCCA 62.672 66.667 11.27 0.00 35.12 4.02
3158 8815 3.800323 AAAAACGCGCGTGCTGACC 62.800 57.895 38.44 0.00 39.65 4.02
3159 8816 2.351888 AAAAACGCGCGTGCTGAC 60.352 55.556 38.44 0.00 39.65 3.51
3173 8830 6.111382 TGAGAATGTGATGGTTTTGCAAAAA 58.889 32.000 25.40 12.25 0.00 1.94
3174 8831 5.668471 TGAGAATGTGATGGTTTTGCAAAA 58.332 33.333 20.46 20.46 0.00 2.44
3175 8832 5.273674 TGAGAATGTGATGGTTTTGCAAA 57.726 34.783 8.05 8.05 0.00 3.68
3176 8833 4.796946 GCTGAGAATGTGATGGTTTTGCAA 60.797 41.667 0.00 0.00 0.00 4.08
3177 8834 3.305539 GCTGAGAATGTGATGGTTTTGCA 60.306 43.478 0.00 0.00 0.00 4.08
3178 8835 3.248266 GCTGAGAATGTGATGGTTTTGC 58.752 45.455 0.00 0.00 0.00 3.68
3179 8836 4.508461 TGCTGAGAATGTGATGGTTTTG 57.492 40.909 0.00 0.00 0.00 2.44
3180 8837 4.586001 ACTTGCTGAGAATGTGATGGTTTT 59.414 37.500 0.00 0.00 0.00 2.43
3181 8838 4.147321 ACTTGCTGAGAATGTGATGGTTT 58.853 39.130 0.00 0.00 0.00 3.27
3182 8839 3.759581 ACTTGCTGAGAATGTGATGGTT 58.240 40.909 0.00 0.00 0.00 3.67
3183 8840 3.430042 ACTTGCTGAGAATGTGATGGT 57.570 42.857 0.00 0.00 0.00 3.55
3184 8841 4.008330 AGAACTTGCTGAGAATGTGATGG 58.992 43.478 0.00 0.00 0.00 3.51
3185 8842 5.293814 CCTAGAACTTGCTGAGAATGTGATG 59.706 44.000 0.00 0.00 0.00 3.07
3186 8843 5.188555 TCCTAGAACTTGCTGAGAATGTGAT 59.811 40.000 0.00 0.00 0.00 3.06
3187 8844 4.528206 TCCTAGAACTTGCTGAGAATGTGA 59.472 41.667 0.00 0.00 0.00 3.58
3188 8845 4.629200 GTCCTAGAACTTGCTGAGAATGTG 59.371 45.833 0.00 0.00 0.00 3.21
3189 8846 4.323104 GGTCCTAGAACTTGCTGAGAATGT 60.323 45.833 0.00 0.00 0.00 2.71
3190 8847 4.187694 GGTCCTAGAACTTGCTGAGAATG 58.812 47.826 0.00 0.00 0.00 2.67
3191 8848 3.198853 GGGTCCTAGAACTTGCTGAGAAT 59.801 47.826 0.00 0.00 0.00 2.40
3192 8849 2.567615 GGGTCCTAGAACTTGCTGAGAA 59.432 50.000 0.00 0.00 0.00 2.87
3193 8850 2.180276 GGGTCCTAGAACTTGCTGAGA 58.820 52.381 0.00 0.00 0.00 3.27
3194 8851 1.208293 GGGGTCCTAGAACTTGCTGAG 59.792 57.143 0.00 0.00 0.00 3.35
3195 8852 1.276622 GGGGTCCTAGAACTTGCTGA 58.723 55.000 0.00 0.00 0.00 4.26
3196 8853 0.253327 GGGGGTCCTAGAACTTGCTG 59.747 60.000 0.00 0.00 0.00 4.41
3197 8854 1.265454 CGGGGGTCCTAGAACTTGCT 61.265 60.000 0.00 0.00 0.00 3.91
3198 8855 1.221021 CGGGGGTCCTAGAACTTGC 59.779 63.158 0.00 0.00 0.00 4.01
3199 8856 0.908180 ACCGGGGGTCCTAGAACTTG 60.908 60.000 6.32 0.00 0.00 3.16
3200 8857 0.178882 AACCGGGGGTCCTAGAACTT 60.179 55.000 6.32 0.00 33.12 2.66
3201 8858 0.178882 AAACCGGGGGTCCTAGAACT 60.179 55.000 6.32 0.00 33.12 3.01
3202 8859 0.035725 CAAACCGGGGGTCCTAGAAC 60.036 60.000 6.32 0.00 33.12 3.01
3203 8860 0.178897 TCAAACCGGGGGTCCTAGAA 60.179 55.000 6.32 0.00 33.12 2.10
3204 8861 0.616679 CTCAAACCGGGGGTCCTAGA 60.617 60.000 6.32 0.00 33.12 2.43
3205 8862 1.623542 CCTCAAACCGGGGGTCCTAG 61.624 65.000 6.32 0.00 33.12 3.02
3206 8863 1.614226 CCTCAAACCGGGGGTCCTA 60.614 63.158 6.32 0.00 33.12 2.94
3207 8864 2.933834 CCTCAAACCGGGGGTCCT 60.934 66.667 6.32 0.00 33.12 3.85
3208 8865 4.735358 GCCTCAAACCGGGGGTCC 62.735 72.222 6.32 0.00 33.12 4.46
3209 8866 3.282374 ATGCCTCAAACCGGGGGTC 62.282 63.158 6.32 0.00 33.12 4.46
3210 8867 3.264845 ATGCCTCAAACCGGGGGT 61.265 61.111 6.32 0.00 37.65 4.95
3211 8868 1.632018 TAGATGCCTCAAACCGGGGG 61.632 60.000 6.32 0.51 0.00 5.40
3212 8869 0.463833 GTAGATGCCTCAAACCGGGG 60.464 60.000 6.32 0.00 0.00 5.73
3213 8870 0.251916 TGTAGATGCCTCAAACCGGG 59.748 55.000 6.32 0.00 0.00 5.73
3214 8871 2.332063 ATGTAGATGCCTCAAACCGG 57.668 50.000 0.00 0.00 0.00 5.28
3215 8872 6.377327 AATAAATGTAGATGCCTCAAACCG 57.623 37.500 0.00 0.00 0.00 4.44
3216 8873 9.087424 GAAAAATAAATGTAGATGCCTCAAACC 57.913 33.333 0.00 0.00 0.00 3.27
3217 8874 9.860898 AGAAAAATAAATGTAGATGCCTCAAAC 57.139 29.630 0.00 0.00 0.00 2.93
3219 8876 9.466497 AGAGAAAAATAAATGTAGATGCCTCAA 57.534 29.630 0.00 0.00 0.00 3.02
3220 8877 9.113838 GAGAGAAAAATAAATGTAGATGCCTCA 57.886 33.333 0.00 0.00 0.00 3.86
3221 8878 8.563732 GGAGAGAAAAATAAATGTAGATGCCTC 58.436 37.037 0.00 0.00 0.00 4.70
3222 8879 7.503902 GGGAGAGAAAAATAAATGTAGATGCCT 59.496 37.037 0.00 0.00 0.00 4.75
3223 8880 7.255625 GGGGAGAGAAAAATAAATGTAGATGCC 60.256 40.741 0.00 0.00 0.00 4.40
3224 8881 7.285401 TGGGGAGAGAAAAATAAATGTAGATGC 59.715 37.037 0.00 0.00 0.00 3.91
3225 8882 8.752005 TGGGGAGAGAAAAATAAATGTAGATG 57.248 34.615 0.00 0.00 0.00 2.90
3226 8883 9.942526 AATGGGGAGAGAAAAATAAATGTAGAT 57.057 29.630 0.00 0.00 0.00 1.98
3227 8884 9.189156 CAATGGGGAGAGAAAAATAAATGTAGA 57.811 33.333 0.00 0.00 0.00 2.59
3228 8885 7.922811 GCAATGGGGAGAGAAAAATAAATGTAG 59.077 37.037 0.00 0.00 0.00 2.74
3229 8886 7.398618 TGCAATGGGGAGAGAAAAATAAATGTA 59.601 33.333 0.00 0.00 0.00 2.29
3230 8887 6.213195 TGCAATGGGGAGAGAAAAATAAATGT 59.787 34.615 0.00 0.00 0.00 2.71
3231 8888 6.642430 TGCAATGGGGAGAGAAAAATAAATG 58.358 36.000 0.00 0.00 0.00 2.32
3232 8889 6.872585 TGCAATGGGGAGAGAAAAATAAAT 57.127 33.333 0.00 0.00 0.00 1.40
3233 8890 6.678568 TTGCAATGGGGAGAGAAAAATAAA 57.321 33.333 0.00 0.00 0.00 1.40
3234 8891 5.337491 GCTTGCAATGGGGAGAGAAAAATAA 60.337 40.000 0.00 0.00 0.00 1.40
3235 8892 4.160252 GCTTGCAATGGGGAGAGAAAAATA 59.840 41.667 0.00 0.00 0.00 1.40
3236 8893 3.055602 GCTTGCAATGGGGAGAGAAAAAT 60.056 43.478 0.00 0.00 0.00 1.82
3237 8894 2.299867 GCTTGCAATGGGGAGAGAAAAA 59.700 45.455 0.00 0.00 0.00 1.94
3238 8895 1.895131 GCTTGCAATGGGGAGAGAAAA 59.105 47.619 0.00 0.00 0.00 2.29
3239 8896 1.076024 AGCTTGCAATGGGGAGAGAAA 59.924 47.619 0.00 0.00 0.00 2.52
3240 8897 0.700564 AGCTTGCAATGGGGAGAGAA 59.299 50.000 0.00 0.00 0.00 2.87
3241 8898 1.583556 TAGCTTGCAATGGGGAGAGA 58.416 50.000 0.00 0.00 0.00 3.10
3242 8899 2.158711 TGATAGCTTGCAATGGGGAGAG 60.159 50.000 0.00 0.00 0.00 3.20
3243 8900 1.845791 TGATAGCTTGCAATGGGGAGA 59.154 47.619 0.00 0.00 0.00 3.71
3244 8901 2.353357 TGATAGCTTGCAATGGGGAG 57.647 50.000 0.00 0.00 0.00 4.30
3245 8902 3.317455 AATGATAGCTTGCAATGGGGA 57.683 42.857 0.00 0.00 0.00 4.81
3246 8903 4.022589 CACTAATGATAGCTTGCAATGGGG 60.023 45.833 0.00 0.00 31.96 4.96
3247 8904 4.022589 CCACTAATGATAGCTTGCAATGGG 60.023 45.833 0.00 0.00 31.96 4.00
3248 8905 4.022589 CCCACTAATGATAGCTTGCAATGG 60.023 45.833 0.00 0.00 31.96 3.16
3249 8906 4.558095 GCCCACTAATGATAGCTTGCAATG 60.558 45.833 0.00 0.00 31.96 2.82
3250 8907 3.571401 GCCCACTAATGATAGCTTGCAAT 59.429 43.478 0.00 0.00 31.96 3.56
3251 8908 2.951642 GCCCACTAATGATAGCTTGCAA 59.048 45.455 0.00 0.00 31.96 4.08
3252 8909 2.575532 GCCCACTAATGATAGCTTGCA 58.424 47.619 0.00 0.00 31.96 4.08
3253 8910 1.882623 GGCCCACTAATGATAGCTTGC 59.117 52.381 0.00 0.00 31.96 4.01
3254 8911 3.181451 TGAGGCCCACTAATGATAGCTTG 60.181 47.826 0.00 0.00 31.96 4.01
3255 8912 3.048600 TGAGGCCCACTAATGATAGCTT 58.951 45.455 0.00 0.00 31.96 3.74
3256 8913 2.694397 TGAGGCCCACTAATGATAGCT 58.306 47.619 0.00 0.00 31.96 3.32
3257 8914 3.008375 TCATGAGGCCCACTAATGATAGC 59.992 47.826 0.00 0.00 41.33 2.97
3258 8915 4.897509 TCATGAGGCCCACTAATGATAG 57.102 45.455 0.00 0.00 41.33 2.08
3259 8916 4.907269 TCTTCATGAGGCCCACTAATGATA 59.093 41.667 0.00 0.00 44.78 2.15
3260 8917 3.718434 TCTTCATGAGGCCCACTAATGAT 59.282 43.478 0.00 0.00 44.78 2.45
3261 8918 3.114606 TCTTCATGAGGCCCACTAATGA 58.885 45.455 0.00 0.00 43.94 2.57
3262 8919 3.565764 TCTTCATGAGGCCCACTAATG 57.434 47.619 0.00 0.00 39.15 1.90
3263 8920 4.591321 TTTCTTCATGAGGCCCACTAAT 57.409 40.909 0.00 0.00 0.00 1.73
3264 8921 4.591321 ATTTCTTCATGAGGCCCACTAA 57.409 40.909 0.00 0.00 0.00 2.24
3265 8922 4.721776 AGTATTTCTTCATGAGGCCCACTA 59.278 41.667 0.00 0.00 0.00 2.74
3266 8923 3.525199 AGTATTTCTTCATGAGGCCCACT 59.475 43.478 0.00 0.00 0.00 4.00
3267 8924 3.629398 CAGTATTTCTTCATGAGGCCCAC 59.371 47.826 0.00 0.00 0.00 4.61
3268 8925 3.266772 ACAGTATTTCTTCATGAGGCCCA 59.733 43.478 0.00 0.00 0.00 5.36
3269 8926 3.891049 ACAGTATTTCTTCATGAGGCCC 58.109 45.455 0.00 0.00 0.00 5.80
3270 8927 5.918608 TCTACAGTATTTCTTCATGAGGCC 58.081 41.667 0.00 0.00 0.00 5.19
3271 8928 7.849804 TTTCTACAGTATTTCTTCATGAGGC 57.150 36.000 0.00 0.00 0.00 4.70
3300 8957 9.967451 AGTAGATATGCATGTGTACTATAGTCT 57.033 33.333 25.46 6.15 28.68 3.24
3306 8963 9.529325 GTGAAAAGTAGATATGCATGTGTACTA 57.471 33.333 26.43 13.14 29.97 1.82
3307 8964 8.260818 AGTGAAAAGTAGATATGCATGTGTACT 58.739 33.333 22.48 22.48 31.07 2.73
3308 8965 8.425577 AGTGAAAAGTAGATATGCATGTGTAC 57.574 34.615 19.21 19.21 0.00 2.90
3309 8966 7.710907 GGAGTGAAAAGTAGATATGCATGTGTA 59.289 37.037 10.16 2.26 0.00 2.90
3310 8967 6.540189 GGAGTGAAAAGTAGATATGCATGTGT 59.460 38.462 10.16 3.45 0.00 3.72
3311 8968 6.539826 TGGAGTGAAAAGTAGATATGCATGTG 59.460 38.462 10.16 0.00 0.00 3.21
3312 8969 6.653020 TGGAGTGAAAAGTAGATATGCATGT 58.347 36.000 10.16 1.23 0.00 3.21
3313 8970 7.412853 GTTGGAGTGAAAAGTAGATATGCATG 58.587 38.462 10.16 0.00 0.00 4.06
3314 8971 6.543831 GGTTGGAGTGAAAAGTAGATATGCAT 59.456 38.462 3.79 3.79 0.00 3.96
3315 8972 5.880332 GGTTGGAGTGAAAAGTAGATATGCA 59.120 40.000 0.00 0.00 0.00 3.96
3316 8973 6.116126 AGGTTGGAGTGAAAAGTAGATATGC 58.884 40.000 0.00 0.00 0.00 3.14
3317 8974 8.567285 AAAGGTTGGAGTGAAAAGTAGATATG 57.433 34.615 0.00 0.00 0.00 1.78
3318 8975 9.232473 GAAAAGGTTGGAGTGAAAAGTAGATAT 57.768 33.333 0.00 0.00 0.00 1.63
3319 8976 7.664318 GGAAAAGGTTGGAGTGAAAAGTAGATA 59.336 37.037 0.00 0.00 0.00 1.98
3320 8977 6.490381 GGAAAAGGTTGGAGTGAAAAGTAGAT 59.510 38.462 0.00 0.00 0.00 1.98
3321 8978 5.826208 GGAAAAGGTTGGAGTGAAAAGTAGA 59.174 40.000 0.00 0.00 0.00 2.59
3322 8979 5.828328 AGGAAAAGGTTGGAGTGAAAAGTAG 59.172 40.000 0.00 0.00 0.00 2.57
3323 8980 5.762279 AGGAAAAGGTTGGAGTGAAAAGTA 58.238 37.500 0.00 0.00 0.00 2.24
3324 8981 4.610333 AGGAAAAGGTTGGAGTGAAAAGT 58.390 39.130 0.00 0.00 0.00 2.66
3325 8982 5.598416 AAGGAAAAGGTTGGAGTGAAAAG 57.402 39.130 0.00 0.00 0.00 2.27
3326 8983 6.014156 TCAAAAGGAAAAGGTTGGAGTGAAAA 60.014 34.615 0.00 0.00 0.00 2.29
3327 8984 5.482175 TCAAAAGGAAAAGGTTGGAGTGAAA 59.518 36.000 0.00 0.00 0.00 2.69
3328 8985 5.020132 TCAAAAGGAAAAGGTTGGAGTGAA 58.980 37.500 0.00 0.00 0.00 3.18
3329 8986 4.605183 TCAAAAGGAAAAGGTTGGAGTGA 58.395 39.130 0.00 0.00 0.00 3.41
3330 8987 5.535753 ATCAAAAGGAAAAGGTTGGAGTG 57.464 39.130 0.00 0.00 0.00 3.51
3331 8988 7.468141 GATATCAAAAGGAAAAGGTTGGAGT 57.532 36.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.