Multiple sequence alignment - TraesCS3A01G394800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G394800 chr3A 100.000 5160 0 0 1 5160 642167318 642162159 0.000000e+00 9529
1 TraesCS3A01G394800 chr3A 83.526 346 51 4 16 358 60527069 60526727 8.340000e-83 318
2 TraesCS3A01G394800 chr3B 94.574 4202 166 29 903 5055 665265711 665261523 0.000000e+00 6440
3 TraesCS3A01G394800 chr3B 92.527 455 23 5 449 897 171086484 171086933 4.360000e-180 641
4 TraesCS3A01G394800 chr3B 84.298 363 53 3 16 377 492101181 492100822 8.220000e-93 351
5 TraesCS3A01G394800 chr3B 96.899 129 4 0 4927 5055 665261606 665261478 3.130000e-52 217
6 TraesCS3A01G394800 chr3B 96.117 103 4 0 5058 5160 665261303 665261201 8.890000e-38 169
7 TraesCS3A01G394800 chr3D 92.936 2987 116 23 2219 5160 503863106 503860170 0.000000e+00 4259
8 TraesCS3A01G394800 chr3D 94.247 730 36 3 924 1648 503864389 503863661 0.000000e+00 1110
9 TraesCS3A01G394800 chr3D 87.751 498 40 6 1657 2146 503863601 503863117 3.490000e-156 562
10 TraesCS3A01G394800 chr3D 83.196 363 53 6 16 377 515235057 515235412 4.980000e-85 326
11 TraesCS3A01G394800 chr3D 81.967 366 54 7 18 375 587537410 587537049 3.020000e-77 300
12 TraesCS3A01G394800 chr3D 87.379 103 11 2 4911 5013 503860390 503860290 3.260000e-22 117
13 TraesCS3A01G394800 chr4B 93.392 454 24 3 449 897 67922221 67921769 0.000000e+00 667
14 TraesCS3A01G394800 chr4B 92.517 441 27 3 449 883 568707896 568708336 1.220000e-175 627
15 TraesCS3A01G394800 chr4B 91.429 455 28 7 449 897 4990003 4990452 9.500000e-172 614
16 TraesCS3A01G394800 chr4D 92.375 459 29 2 446 899 421810309 421810766 0.000000e+00 649
17 TraesCS3A01G394800 chr4D 92.375 459 29 2 446 899 421819058 421819515 0.000000e+00 649
18 TraesCS3A01G394800 chr5B 92.760 442 25 4 449 883 120038280 120037839 2.620000e-177 632
19 TraesCS3A01G394800 chr1D 91.648 455 32 3 448 897 478811436 478811889 4.390000e-175 625
20 TraesCS3A01G394800 chr1D 91.630 454 31 4 449 897 76981259 76981710 5.670000e-174 621
21 TraesCS3A01G394800 chr5A 82.114 369 52 11 16 377 592518028 592518389 2.330000e-78 303
22 TraesCS3A01G394800 chr2B 81.572 369 59 5 16 381 159260395 159260033 3.910000e-76 296
23 TraesCS3A01G394800 chr7A 81.556 347 50 9 19 356 522922072 522921731 1.830000e-69 274
24 TraesCS3A01G394800 chr6B 82.209 326 51 5 55 377 262180907 262181228 1.830000e-69 274
25 TraesCS3A01G394800 chr6D 81.111 360 50 14 23 375 34536428 34536776 6.580000e-69 272


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G394800 chr3A 642162159 642167318 5159 True 9529.000000 9529 100.000000 1 5160 1 chr3A.!!$R2 5159
1 TraesCS3A01G394800 chr3B 665261201 665265711 4510 True 2275.333333 6440 95.863333 903 5160 3 chr3B.!!$R2 4257
2 TraesCS3A01G394800 chr3D 503860170 503864389 4219 True 1512.000000 4259 90.578250 924 5160 4 chr3D.!!$R2 4236

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
832 833 0.033504 ATAGTAATCGTGCCCTGGCG 59.966 55.000 3.32 0.00 45.51 5.69 F
973 974 0.117541 TTAGCCCCTCTGGTACACCA 59.882 55.000 0.28 0.28 45.30 4.17 F
1069 1090 0.179048 CCTCCTATGCACGGCAATCA 60.179 55.000 2.68 0.00 43.62 2.57 F
1769 1849 1.135689 GCGAGTGGCGATTTTCATTGT 60.136 47.619 0.00 0.00 44.57 2.71 F
2786 2869 2.085118 TGGGAATATGGTGCCAATGG 57.915 50.000 0.00 0.00 35.84 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2786 2869 1.168714 GACATGAGGGCAAACCACTC 58.831 55.000 0.00 0.0 43.89 3.51 R
2840 2923 7.622893 AGAAATCCAAAATGCTTCTCTACTC 57.377 36.000 0.00 0.0 0.00 2.59 R
2890 2973 9.167311 CAGGCACTTAGTAAAGTTGATCTATTT 57.833 33.333 0.00 0.0 43.60 1.40 R
3330 3413 2.628657 ACTATGTTCGGCTCTATCCCAC 59.371 50.000 0.00 0.0 0.00 4.61 R
4618 4703 1.068055 CACCATCAAACAGCTGCCTTC 60.068 52.381 15.27 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.359194 CGCCTGAGATCCACAGAAG 57.641 57.895 16.03 7.89 37.54 2.85
19 20 0.809241 CGCCTGAGATCCACAGAAGC 60.809 60.000 16.03 11.62 37.54 3.86
20 21 0.251354 GCCTGAGATCCACAGAAGCA 59.749 55.000 16.03 0.00 37.54 3.91
21 22 2.011046 GCCTGAGATCCACAGAAGCAC 61.011 57.143 16.03 1.18 37.54 4.40
22 23 1.406614 CCTGAGATCCACAGAAGCACC 60.407 57.143 16.03 0.00 37.54 5.01
23 24 0.615331 TGAGATCCACAGAAGCACCC 59.385 55.000 0.00 0.00 0.00 4.61
24 25 0.908198 GAGATCCACAGAAGCACCCT 59.092 55.000 0.00 0.00 0.00 4.34
25 26 0.908198 AGATCCACAGAAGCACCCTC 59.092 55.000 0.00 0.00 0.00 4.30
26 27 0.908198 GATCCACAGAAGCACCCTCT 59.092 55.000 0.00 0.00 0.00 3.69
27 28 1.280421 GATCCACAGAAGCACCCTCTT 59.720 52.381 0.00 0.00 0.00 2.85
28 29 1.140312 TCCACAGAAGCACCCTCTTT 58.860 50.000 0.00 0.00 0.00 2.52
29 30 1.202806 TCCACAGAAGCACCCTCTTTG 60.203 52.381 0.00 0.00 0.00 2.77
30 31 0.595095 CACAGAAGCACCCTCTTTGC 59.405 55.000 0.00 0.00 40.52 3.68
35 36 3.272031 GCACCCTCTTTGCTGCTC 58.728 61.111 0.00 0.00 37.00 4.26
36 37 2.338785 GCACCCTCTTTGCTGCTCC 61.339 63.158 0.00 0.00 37.00 4.70
37 38 1.073722 CACCCTCTTTGCTGCTCCA 59.926 57.895 0.00 0.00 0.00 3.86
38 39 0.538057 CACCCTCTTTGCTGCTCCAA 60.538 55.000 0.00 0.00 0.00 3.53
39 40 0.407139 ACCCTCTTTGCTGCTCCAAT 59.593 50.000 0.00 0.00 0.00 3.16
40 41 0.815734 CCCTCTTTGCTGCTCCAATG 59.184 55.000 0.00 0.00 0.00 2.82
41 42 1.615116 CCCTCTTTGCTGCTCCAATGA 60.615 52.381 0.00 0.00 0.00 2.57
42 43 1.743958 CCTCTTTGCTGCTCCAATGAG 59.256 52.381 17.74 17.74 42.26 2.90
50 51 3.099438 CTCCAATGAGCAGCGCAG 58.901 61.111 11.47 1.31 0.00 5.18
51 52 1.744368 CTCCAATGAGCAGCGCAGT 60.744 57.895 11.47 0.00 0.00 4.40
52 53 1.302752 TCCAATGAGCAGCGCAGTT 60.303 52.632 11.47 0.00 0.00 3.16
53 54 1.154093 CCAATGAGCAGCGCAGTTG 60.154 57.895 11.47 9.14 43.28 3.16
54 55 1.154093 CAATGAGCAGCGCAGTTGG 60.154 57.895 11.47 0.00 39.81 3.77
55 56 1.302752 AATGAGCAGCGCAGTTGGA 60.303 52.632 11.47 0.00 39.81 3.53
56 57 1.580845 AATGAGCAGCGCAGTTGGAC 61.581 55.000 11.47 0.00 39.81 4.02
57 58 2.666190 GAGCAGCGCAGTTGGACA 60.666 61.111 11.47 0.00 39.81 4.02
58 59 2.033141 AGCAGCGCAGTTGGACAT 59.967 55.556 11.47 0.00 39.81 3.06
59 60 0.740868 GAGCAGCGCAGTTGGACATA 60.741 55.000 11.47 0.00 39.81 2.29
60 61 0.742281 AGCAGCGCAGTTGGACATAG 60.742 55.000 11.47 0.00 39.81 2.23
61 62 1.709147 GCAGCGCAGTTGGACATAGG 61.709 60.000 11.47 0.00 39.81 2.57
62 63 1.091771 CAGCGCAGTTGGACATAGGG 61.092 60.000 11.47 0.00 34.22 3.53
63 64 1.220749 GCGCAGTTGGACATAGGGA 59.779 57.895 0.30 0.00 0.00 4.20
64 65 0.392461 GCGCAGTTGGACATAGGGAA 60.392 55.000 0.30 0.00 0.00 3.97
65 66 1.656652 CGCAGTTGGACATAGGGAAG 58.343 55.000 0.00 0.00 0.00 3.46
66 67 1.207089 CGCAGTTGGACATAGGGAAGA 59.793 52.381 0.00 0.00 0.00 2.87
67 68 2.158900 CGCAGTTGGACATAGGGAAGAT 60.159 50.000 0.00 0.00 0.00 2.40
68 69 3.069586 CGCAGTTGGACATAGGGAAGATA 59.930 47.826 0.00 0.00 0.00 1.98
69 70 4.262635 CGCAGTTGGACATAGGGAAGATAT 60.263 45.833 0.00 0.00 0.00 1.63
70 71 4.999950 GCAGTTGGACATAGGGAAGATATG 59.000 45.833 0.00 0.00 36.81 1.78
71 72 5.555017 CAGTTGGACATAGGGAAGATATGG 58.445 45.833 0.00 0.00 35.37 2.74
72 73 4.599241 AGTTGGACATAGGGAAGATATGGG 59.401 45.833 0.00 0.00 35.37 4.00
73 74 3.531059 TGGACATAGGGAAGATATGGGG 58.469 50.000 0.00 0.00 35.37 4.96
74 75 2.846827 GGACATAGGGAAGATATGGGGG 59.153 54.545 0.00 0.00 35.37 5.40
75 76 3.506031 GGACATAGGGAAGATATGGGGGA 60.506 52.174 0.00 0.00 35.37 4.81
76 77 4.175962 GACATAGGGAAGATATGGGGGAA 58.824 47.826 0.00 0.00 35.37 3.97
77 78 4.179133 ACATAGGGAAGATATGGGGGAAG 58.821 47.826 0.00 0.00 35.37 3.46
78 79 4.140204 ACATAGGGAAGATATGGGGGAAGA 60.140 45.833 0.00 0.00 35.37 2.87
79 80 3.455085 AGGGAAGATATGGGGGAAGAA 57.545 47.619 0.00 0.00 0.00 2.52
80 81 3.973179 AGGGAAGATATGGGGGAAGAAT 58.027 45.455 0.00 0.00 0.00 2.40
81 82 5.120183 AGGGAAGATATGGGGGAAGAATA 57.880 43.478 0.00 0.00 0.00 1.75
82 83 5.690917 AGGGAAGATATGGGGGAAGAATAT 58.309 41.667 0.00 0.00 0.00 1.28
83 84 5.493977 AGGGAAGATATGGGGGAAGAATATG 59.506 44.000 0.00 0.00 0.00 1.78
84 85 5.196695 GGAAGATATGGGGGAAGAATATGC 58.803 45.833 0.00 0.00 0.00 3.14
85 86 4.870021 AGATATGGGGGAAGAATATGCC 57.130 45.455 0.00 0.00 0.00 4.40
86 87 4.452270 AGATATGGGGGAAGAATATGCCT 58.548 43.478 0.00 0.00 0.00 4.75
87 88 4.476479 AGATATGGGGGAAGAATATGCCTC 59.524 45.833 0.00 0.00 0.00 4.70
88 89 2.212752 TGGGGGAAGAATATGCCTCT 57.787 50.000 0.00 0.00 31.38 3.69
89 90 3.360740 TGGGGGAAGAATATGCCTCTA 57.639 47.619 0.00 0.00 31.38 2.43
90 91 3.251484 TGGGGGAAGAATATGCCTCTAG 58.749 50.000 0.00 0.00 31.38 2.43
91 92 2.573915 GGGGGAAGAATATGCCTCTAGG 59.426 54.545 0.00 0.00 38.53 3.02
92 93 2.573915 GGGGAAGAATATGCCTCTAGGG 59.426 54.545 0.00 0.00 35.18 3.53
101 102 4.860881 CCTCTAGGGCTCCCGGCA 62.861 72.222 0.00 0.00 44.01 5.69
102 103 3.230245 CTCTAGGGCTCCCGGCAG 61.230 72.222 0.00 0.00 44.01 4.85
103 104 4.075793 TCTAGGGCTCCCGGCAGT 62.076 66.667 0.00 0.00 44.01 4.40
104 105 3.541713 CTAGGGCTCCCGGCAGTC 61.542 72.222 0.00 0.00 44.01 3.51
115 116 4.832608 GGCAGTCCGGTTAGCGGG 62.833 72.222 22.84 8.09 36.54 6.13
117 118 3.771160 CAGTCCGGTTAGCGGGCT 61.771 66.667 24.69 24.69 42.85 5.19
118 119 3.771160 AGTCCGGTTAGCGGGCTG 61.771 66.667 29.16 0.00 40.29 4.85
119 120 4.078516 GTCCGGTTAGCGGGCTGT 62.079 66.667 20.59 0.00 35.33 4.40
120 121 3.766691 TCCGGTTAGCGGGCTGTC 61.767 66.667 22.84 0.00 35.33 3.51
121 122 4.077184 CCGGTTAGCGGGCTGTCA 62.077 66.667 15.70 0.00 0.00 3.58
122 123 2.047655 CGGTTAGCGGGCTGTCAA 60.048 61.111 2.86 0.00 0.00 3.18
123 124 1.669760 CGGTTAGCGGGCTGTCAAA 60.670 57.895 2.86 0.00 0.00 2.69
124 125 1.873863 GGTTAGCGGGCTGTCAAAC 59.126 57.895 2.86 0.00 0.00 2.93
125 126 0.887387 GGTTAGCGGGCTGTCAAACA 60.887 55.000 2.86 0.00 0.00 2.83
126 127 1.165270 GTTAGCGGGCTGTCAAACAT 58.835 50.000 2.86 0.00 0.00 2.71
127 128 1.135689 GTTAGCGGGCTGTCAAACATG 60.136 52.381 2.86 0.00 0.00 3.21
128 129 0.676466 TAGCGGGCTGTCAAACATGG 60.676 55.000 2.86 0.00 0.00 3.66
129 130 2.993471 GCGGGCTGTCAAACATGGG 61.993 63.158 0.00 0.00 0.00 4.00
130 131 2.342650 CGGGCTGTCAAACATGGGG 61.343 63.158 0.00 0.00 0.00 4.96
131 132 1.076549 GGGCTGTCAAACATGGGGA 59.923 57.895 0.00 0.00 0.00 4.81
132 133 0.541764 GGGCTGTCAAACATGGGGAA 60.542 55.000 0.00 0.00 0.00 3.97
133 134 0.890683 GGCTGTCAAACATGGGGAAG 59.109 55.000 0.00 0.00 0.00 3.46
134 135 1.547675 GGCTGTCAAACATGGGGAAGA 60.548 52.381 0.00 0.00 0.00 2.87
135 136 1.541588 GCTGTCAAACATGGGGAAGAC 59.458 52.381 0.00 0.00 0.00 3.01
136 137 2.862541 CTGTCAAACATGGGGAAGACA 58.137 47.619 0.00 3.35 35.07 3.41
137 138 3.221771 CTGTCAAACATGGGGAAGACAA 58.778 45.455 0.00 0.00 35.81 3.18
138 139 3.221771 TGTCAAACATGGGGAAGACAAG 58.778 45.455 0.00 0.00 33.55 3.16
139 140 2.029918 GTCAAACATGGGGAAGACAAGC 60.030 50.000 0.00 0.00 0.00 4.01
140 141 2.158475 TCAAACATGGGGAAGACAAGCT 60.158 45.455 0.00 0.00 0.00 3.74
141 142 1.915141 AACATGGGGAAGACAAGCTG 58.085 50.000 0.00 0.00 0.00 4.24
142 143 0.610232 ACATGGGGAAGACAAGCTGC 60.610 55.000 0.00 0.00 0.00 5.25
143 144 1.377725 ATGGGGAAGACAAGCTGCG 60.378 57.895 0.00 0.00 0.00 5.18
144 145 2.747855 GGGGAAGACAAGCTGCGG 60.748 66.667 0.00 0.00 0.00 5.69
145 146 2.747855 GGGAAGACAAGCTGCGGG 60.748 66.667 0.00 0.00 0.00 6.13
146 147 3.435186 GGAAGACAAGCTGCGGGC 61.435 66.667 0.00 0.00 42.19 6.13
163 164 2.018542 GGCGACCATAAACTAGTGCA 57.981 50.000 0.00 0.00 0.00 4.57
164 165 1.933853 GGCGACCATAAACTAGTGCAG 59.066 52.381 0.00 0.00 0.00 4.41
165 166 2.618053 GCGACCATAAACTAGTGCAGT 58.382 47.619 0.00 0.00 40.05 4.40
166 167 2.348666 GCGACCATAAACTAGTGCAGTG 59.651 50.000 3.69 0.00 37.63 3.66
167 168 3.585862 CGACCATAAACTAGTGCAGTGT 58.414 45.455 3.69 0.00 37.63 3.55
168 169 4.740268 CGACCATAAACTAGTGCAGTGTA 58.260 43.478 3.69 0.00 37.63 2.90
169 170 5.348986 CGACCATAAACTAGTGCAGTGTAT 58.651 41.667 3.69 0.00 38.08 2.29
170 171 5.810587 CGACCATAAACTAGTGCAGTGTATT 59.189 40.000 3.69 0.00 35.77 1.89
171 172 6.312918 CGACCATAAACTAGTGCAGTGTATTT 59.687 38.462 3.69 4.69 35.77 1.40
172 173 7.490079 CGACCATAAACTAGTGCAGTGTATTTA 59.510 37.037 3.69 6.72 35.77 1.40
173 174 9.326413 GACCATAAACTAGTGCAGTGTATTTAT 57.674 33.333 3.69 8.61 35.77 1.40
174 175 9.109393 ACCATAAACTAGTGCAGTGTATTTATG 57.891 33.333 23.75 23.75 35.77 1.90
175 176 9.109393 CCATAAACTAGTGCAGTGTATTTATGT 57.891 33.333 25.85 8.74 35.77 2.29
177 178 6.887376 AACTAGTGCAGTGTATTTATGTCG 57.113 37.500 3.69 0.00 37.63 4.35
178 179 4.804139 ACTAGTGCAGTGTATTTATGTCGC 59.196 41.667 3.69 0.00 35.62 5.19
179 180 2.603110 AGTGCAGTGTATTTATGTCGCG 59.397 45.455 0.00 0.00 0.00 5.87
180 181 1.930503 TGCAGTGTATTTATGTCGCGG 59.069 47.619 6.13 0.00 0.00 6.46
181 182 1.260561 GCAGTGTATTTATGTCGCGGG 59.739 52.381 6.13 0.00 0.00 6.13
182 183 2.816689 CAGTGTATTTATGTCGCGGGA 58.183 47.619 6.13 0.00 0.00 5.14
183 184 3.191669 CAGTGTATTTATGTCGCGGGAA 58.808 45.455 6.13 0.00 0.00 3.97
184 185 3.807622 CAGTGTATTTATGTCGCGGGAAT 59.192 43.478 6.13 3.22 0.00 3.01
185 186 3.807622 AGTGTATTTATGTCGCGGGAATG 59.192 43.478 6.13 0.00 0.00 2.67
186 187 3.805422 GTGTATTTATGTCGCGGGAATGA 59.195 43.478 6.13 0.00 0.00 2.57
187 188 4.271533 GTGTATTTATGTCGCGGGAATGAA 59.728 41.667 6.13 4.31 0.00 2.57
188 189 4.509970 TGTATTTATGTCGCGGGAATGAAG 59.490 41.667 6.13 0.00 0.00 3.02
189 190 1.295792 TTATGTCGCGGGAATGAAGC 58.704 50.000 6.13 0.00 0.00 3.86
190 191 0.464036 TATGTCGCGGGAATGAAGCT 59.536 50.000 6.13 0.00 0.00 3.74
191 192 0.811616 ATGTCGCGGGAATGAAGCTC 60.812 55.000 6.13 0.00 0.00 4.09
192 193 2.174319 GTCGCGGGAATGAAGCTCC 61.174 63.158 6.13 0.00 0.00 4.70
193 194 2.125147 CGCGGGAATGAAGCTCCA 60.125 61.111 0.00 0.00 34.34 3.86
194 195 2.464459 CGCGGGAATGAAGCTCCAC 61.464 63.158 0.00 0.00 34.34 4.02
195 196 1.377202 GCGGGAATGAAGCTCCACA 60.377 57.895 0.00 0.00 34.34 4.17
196 197 0.749454 GCGGGAATGAAGCTCCACAT 60.749 55.000 0.00 0.00 34.34 3.21
197 198 1.019673 CGGGAATGAAGCTCCACATG 58.980 55.000 0.00 0.00 34.34 3.21
198 199 1.407299 CGGGAATGAAGCTCCACATGA 60.407 52.381 0.00 0.00 34.34 3.07
199 200 2.019984 GGGAATGAAGCTCCACATGAC 58.980 52.381 0.00 0.00 34.34 3.06
200 201 2.019984 GGAATGAAGCTCCACATGACC 58.980 52.381 0.00 0.00 32.77 4.02
201 202 1.667724 GAATGAAGCTCCACATGACCG 59.332 52.381 0.00 0.00 0.00 4.79
202 203 0.615331 ATGAAGCTCCACATGACCGT 59.385 50.000 0.00 0.00 0.00 4.83
203 204 1.262417 TGAAGCTCCACATGACCGTA 58.738 50.000 0.00 0.00 0.00 4.02
204 205 1.067142 TGAAGCTCCACATGACCGTAC 60.067 52.381 0.00 0.00 0.00 3.67
205 206 0.108804 AAGCTCCACATGACCGTACG 60.109 55.000 8.69 8.69 0.00 3.67
206 207 1.214589 GCTCCACATGACCGTACGT 59.785 57.895 15.21 2.02 0.00 3.57
207 208 1.076533 GCTCCACATGACCGTACGTG 61.077 60.000 15.21 8.29 0.00 4.49
208 209 1.076533 CTCCACATGACCGTACGTGC 61.077 60.000 15.21 6.09 0.00 5.34
209 210 1.373622 CCACATGACCGTACGTGCA 60.374 57.895 15.21 11.90 0.00 4.57
210 211 1.623081 CCACATGACCGTACGTGCAC 61.623 60.000 15.21 6.82 0.00 4.57
211 212 0.941936 CACATGACCGTACGTGCACA 60.942 55.000 18.64 8.72 0.00 4.57
212 213 0.037697 ACATGACCGTACGTGCACAT 60.038 50.000 18.64 3.45 0.00 3.21
213 214 1.202817 ACATGACCGTACGTGCACATA 59.797 47.619 18.64 2.14 0.00 2.29
214 215 1.852280 CATGACCGTACGTGCACATAG 59.148 52.381 18.64 2.84 0.00 2.23
215 216 0.883153 TGACCGTACGTGCACATAGT 59.117 50.000 18.64 9.39 0.00 2.12
216 217 1.270274 TGACCGTACGTGCACATAGTT 59.730 47.619 18.64 0.00 0.00 2.24
217 218 2.288334 TGACCGTACGTGCACATAGTTT 60.288 45.455 18.64 0.00 0.00 2.66
218 219 2.733026 GACCGTACGTGCACATAGTTTT 59.267 45.455 18.64 0.00 0.00 2.43
219 220 3.911868 ACCGTACGTGCACATAGTTTTA 58.088 40.909 18.64 0.00 0.00 1.52
220 221 3.922240 ACCGTACGTGCACATAGTTTTAG 59.078 43.478 18.64 0.00 0.00 1.85
221 222 3.922240 CCGTACGTGCACATAGTTTTAGT 59.078 43.478 18.64 5.57 0.00 2.24
222 223 4.386652 CCGTACGTGCACATAGTTTTAGTT 59.613 41.667 18.64 0.00 0.00 2.24
223 224 5.107375 CCGTACGTGCACATAGTTTTAGTTT 60.107 40.000 18.64 0.00 0.00 2.66
224 225 6.357198 CGTACGTGCACATAGTTTTAGTTTT 58.643 36.000 18.64 0.00 0.00 2.43
225 226 6.847289 CGTACGTGCACATAGTTTTAGTTTTT 59.153 34.615 18.64 0.00 0.00 1.94
258 259 9.751542 TTGAAAATATGTTCAAAATGTAACCGT 57.248 25.926 17.11 0.00 42.94 4.83
259 260 9.751542 TGAAAATATGTTCAAAATGTAACCGTT 57.248 25.926 5.81 0.00 34.59 4.44
263 264 6.741448 ATGTTCAAAATGTAACCGTTTTCG 57.259 33.333 0.00 0.00 37.62 3.46
264 265 5.638783 TGTTCAAAATGTAACCGTTTTCGT 58.361 33.333 0.00 0.00 37.62 3.85
265 266 5.738225 TGTTCAAAATGTAACCGTTTTCGTC 59.262 36.000 0.00 0.00 37.62 4.20
266 267 4.846509 TCAAAATGTAACCGTTTTCGTCC 58.153 39.130 0.00 0.00 37.62 4.79
267 268 3.524763 AAATGTAACCGTTTTCGTCCG 57.475 42.857 0.00 0.00 42.35 4.79
276 277 4.186241 CCGTTTTCGTCCGGTTTATATG 57.814 45.455 0.00 0.00 42.35 1.78
277 278 3.864583 CCGTTTTCGTCCGGTTTATATGA 59.135 43.478 0.00 0.00 42.35 2.15
278 279 4.329528 CCGTTTTCGTCCGGTTTATATGAA 59.670 41.667 0.00 0.00 42.35 2.57
279 280 5.163874 CCGTTTTCGTCCGGTTTATATGAAA 60.164 40.000 0.00 2.09 42.35 2.69
280 281 6.457257 CCGTTTTCGTCCGGTTTATATGAAAT 60.457 38.462 0.00 0.00 42.35 2.17
281 282 6.626095 CGTTTTCGTCCGGTTTATATGAAATC 59.374 38.462 0.00 3.85 38.65 2.17
282 283 6.607735 TTTCGTCCGGTTTATATGAAATCC 57.392 37.500 0.00 0.00 0.00 3.01
283 284 4.300803 TCGTCCGGTTTATATGAAATCCG 58.699 43.478 0.00 3.16 40.05 4.18
284 285 4.053295 CGTCCGGTTTATATGAAATCCGT 58.947 43.478 0.00 0.00 39.16 4.69
285 286 4.149396 CGTCCGGTTTATATGAAATCCGTC 59.851 45.833 0.00 2.19 39.16 4.79
286 287 5.051816 GTCCGGTTTATATGAAATCCGTCA 58.948 41.667 0.00 0.00 39.16 4.35
287 288 5.699458 GTCCGGTTTATATGAAATCCGTCAT 59.301 40.000 0.00 0.00 39.16 3.06
288 289 5.699001 TCCGGTTTATATGAAATCCGTCATG 59.301 40.000 0.00 0.00 39.16 3.07
289 290 5.468746 CCGGTTTATATGAAATCCGTCATGT 59.531 40.000 8.02 0.00 39.16 3.21
290 291 6.017440 CCGGTTTATATGAAATCCGTCATGTT 60.017 38.462 8.02 0.00 39.16 2.71
291 292 7.414436 CGGTTTATATGAAATCCGTCATGTTT 58.586 34.615 0.00 0.00 38.69 2.83
292 293 8.552865 CGGTTTATATGAAATCCGTCATGTTTA 58.447 33.333 0.00 0.00 38.69 2.01
306 307 9.268268 TCCGTCATGTTTATATGAAATCTAACC 57.732 33.333 0.00 0.00 38.69 2.85
307 308 9.273016 CCGTCATGTTTATATGAAATCTAACCT 57.727 33.333 0.00 0.00 38.69 3.50
318 319 6.647334 TGAAATCTAACCTTGTTTGCATGA 57.353 33.333 0.00 0.00 0.00 3.07
319 320 7.048629 TGAAATCTAACCTTGTTTGCATGAA 57.951 32.000 0.00 0.00 0.00 2.57
320 321 7.669427 TGAAATCTAACCTTGTTTGCATGAAT 58.331 30.769 0.00 0.00 0.00 2.57
321 322 8.149647 TGAAATCTAACCTTGTTTGCATGAATT 58.850 29.630 0.00 0.00 0.00 2.17
322 323 8.538409 AAATCTAACCTTGTTTGCATGAATTC 57.462 30.769 0.00 0.00 0.00 2.17
323 324 6.024552 TCTAACCTTGTTTGCATGAATTCC 57.975 37.500 2.27 0.00 0.00 3.01
324 325 4.686191 AACCTTGTTTGCATGAATTCCA 57.314 36.364 2.27 0.00 0.00 3.53
325 326 4.895668 ACCTTGTTTGCATGAATTCCAT 57.104 36.364 2.27 0.00 35.44 3.41
326 327 5.231702 ACCTTGTTTGCATGAATTCCATT 57.768 34.783 2.27 0.00 31.94 3.16
327 328 5.240121 ACCTTGTTTGCATGAATTCCATTC 58.760 37.500 2.27 0.00 39.70 2.67
328 329 4.632688 CCTTGTTTGCATGAATTCCATTCC 59.367 41.667 2.27 0.00 38.50 3.01
329 330 5.484715 CTTGTTTGCATGAATTCCATTCCT 58.515 37.500 2.27 0.00 38.50 3.36
330 331 5.486735 TGTTTGCATGAATTCCATTCCTT 57.513 34.783 2.27 0.00 38.50 3.36
331 332 5.867330 TGTTTGCATGAATTCCATTCCTTT 58.133 33.333 2.27 0.00 38.50 3.11
332 333 5.701750 TGTTTGCATGAATTCCATTCCTTTG 59.298 36.000 2.27 0.00 38.50 2.77
333 334 5.486735 TTGCATGAATTCCATTCCTTTGT 57.513 34.783 2.27 0.00 38.50 2.83
334 335 5.486735 TGCATGAATTCCATTCCTTTGTT 57.513 34.783 2.27 0.00 38.50 2.83
335 336 5.239351 TGCATGAATTCCATTCCTTTGTTG 58.761 37.500 2.27 0.00 38.50 3.33
336 337 5.011840 TGCATGAATTCCATTCCTTTGTTGA 59.988 36.000 2.27 0.00 38.50 3.18
337 338 5.933463 GCATGAATTCCATTCCTTTGTTGAA 59.067 36.000 2.27 0.00 38.50 2.69
338 339 6.427547 GCATGAATTCCATTCCTTTGTTGAAA 59.572 34.615 2.27 0.00 38.50 2.69
339 340 7.041235 GCATGAATTCCATTCCTTTGTTGAAAA 60.041 33.333 2.27 0.00 38.50 2.29
340 341 8.838365 CATGAATTCCATTCCTTTGTTGAAAAA 58.162 29.630 2.27 0.00 38.50 1.94
341 342 8.436046 TGAATTCCATTCCTTTGTTGAAAAAG 57.564 30.769 2.27 0.00 38.50 2.27
342 343 8.263640 TGAATTCCATTCCTTTGTTGAAAAAGA 58.736 29.630 2.27 0.00 37.01 2.52
343 344 8.667076 AATTCCATTCCTTTGTTGAAAAAGAG 57.333 30.769 0.00 0.00 39.12 2.85
344 345 6.790232 TCCATTCCTTTGTTGAAAAAGAGT 57.210 33.333 0.00 0.00 39.12 3.24
345 346 7.181569 TCCATTCCTTTGTTGAAAAAGAGTT 57.818 32.000 0.00 0.00 39.12 3.01
346 347 7.619965 TCCATTCCTTTGTTGAAAAAGAGTTT 58.380 30.769 0.00 0.00 39.12 2.66
347 348 7.548780 TCCATTCCTTTGTTGAAAAAGAGTTTG 59.451 33.333 0.00 0.00 39.12 2.93
348 349 7.548780 CCATTCCTTTGTTGAAAAAGAGTTTGA 59.451 33.333 0.00 0.00 39.12 2.69
349 350 8.934825 CATTCCTTTGTTGAAAAAGAGTTTGAA 58.065 29.630 0.00 0.00 39.12 2.69
350 351 8.894768 TTCCTTTGTTGAAAAAGAGTTTGAAA 57.105 26.923 0.00 0.00 39.12 2.69
351 352 9.500785 TTCCTTTGTTGAAAAAGAGTTTGAAAT 57.499 25.926 0.00 0.00 39.12 2.17
352 353 8.934825 TCCTTTGTTGAAAAAGAGTTTGAAATG 58.065 29.630 0.00 0.00 39.12 2.32
353 354 8.720562 CCTTTGTTGAAAAAGAGTTTGAAATGT 58.279 29.630 0.00 0.00 39.12 2.71
357 358 8.816144 TGTTGAAAAAGAGTTTGAAATGTATGC 58.184 29.630 0.00 0.00 0.00 3.14
358 359 7.621832 TGAAAAAGAGTTTGAAATGTATGCG 57.378 32.000 0.00 0.00 0.00 4.73
359 360 6.640499 TGAAAAAGAGTTTGAAATGTATGCGG 59.360 34.615 0.00 0.00 0.00 5.69
360 361 5.705609 AAAGAGTTTGAAATGTATGCGGT 57.294 34.783 0.00 0.00 0.00 5.68
361 362 4.946784 AGAGTTTGAAATGTATGCGGTC 57.053 40.909 0.00 0.00 0.00 4.79
362 363 4.323417 AGAGTTTGAAATGTATGCGGTCA 58.677 39.130 0.00 0.00 0.00 4.02
363 364 4.943705 AGAGTTTGAAATGTATGCGGTCAT 59.056 37.500 0.00 0.00 36.73 3.06
364 365 4.985413 AGTTTGAAATGTATGCGGTCATG 58.015 39.130 0.00 0.00 34.22 3.07
365 366 4.104776 GTTTGAAATGTATGCGGTCATGG 58.895 43.478 0.00 0.00 34.22 3.66
366 367 2.997980 TGAAATGTATGCGGTCATGGT 58.002 42.857 0.00 0.00 34.22 3.55
367 368 3.351740 TGAAATGTATGCGGTCATGGTT 58.648 40.909 0.00 0.00 34.22 3.67
368 369 3.128415 TGAAATGTATGCGGTCATGGTTG 59.872 43.478 0.00 0.00 34.22 3.77
369 370 1.679139 ATGTATGCGGTCATGGTTGG 58.321 50.000 0.00 0.00 34.22 3.77
370 371 0.615850 TGTATGCGGTCATGGTTGGA 59.384 50.000 0.00 0.00 34.22 3.53
371 372 1.211703 TGTATGCGGTCATGGTTGGAT 59.788 47.619 0.00 0.00 34.22 3.41
372 373 1.603802 GTATGCGGTCATGGTTGGATG 59.396 52.381 0.00 0.00 34.22 3.51
373 374 0.752743 ATGCGGTCATGGTTGGATGG 60.753 55.000 0.00 0.00 0.00 3.51
374 375 2.774799 GCGGTCATGGTTGGATGGC 61.775 63.158 0.00 0.00 0.00 4.40
375 376 2.472059 CGGTCATGGTTGGATGGCG 61.472 63.158 0.00 0.00 0.00 5.69
376 377 1.378514 GGTCATGGTTGGATGGCGT 60.379 57.895 0.00 0.00 0.00 5.68
377 378 1.656818 GGTCATGGTTGGATGGCGTG 61.657 60.000 0.00 0.00 0.00 5.34
378 379 0.960364 GTCATGGTTGGATGGCGTGT 60.960 55.000 0.00 0.00 0.00 4.49
379 380 0.676466 TCATGGTTGGATGGCGTGTC 60.676 55.000 0.00 0.00 0.00 3.67
380 381 1.378514 ATGGTTGGATGGCGTGTCC 60.379 57.895 0.00 0.00 36.26 4.02
381 382 3.124921 GGTTGGATGGCGTGTCCG 61.125 66.667 0.00 0.00 38.64 4.79
391 392 2.579787 CGTGTCCGCGGACTGATC 60.580 66.667 46.72 33.48 44.80 2.92
392 393 2.202756 GTGTCCGCGGACTGATCC 60.203 66.667 46.72 29.41 44.80 3.36
393 394 3.458163 TGTCCGCGGACTGATCCC 61.458 66.667 46.72 27.34 42.83 3.85
394 395 4.222847 GTCCGCGGACTGATCCCC 62.223 72.222 43.32 20.64 42.83 4.81
398 399 3.771160 GCGGACTGATCCCCGTGT 61.771 66.667 16.25 0.00 46.84 4.49
399 400 2.978824 CGGACTGATCCCCGTGTT 59.021 61.111 9.35 0.00 42.83 3.32
400 401 1.153628 CGGACTGATCCCCGTGTTC 60.154 63.158 9.35 0.00 42.83 3.18
401 402 1.153628 GGACTGATCCCCGTGTTCG 60.154 63.158 0.00 0.00 39.39 3.95
402 403 1.590147 GACTGATCCCCGTGTTCGT 59.410 57.895 0.00 0.00 35.01 3.85
403 404 0.736325 GACTGATCCCCGTGTTCGTG 60.736 60.000 0.00 0.00 35.01 4.35
404 405 1.447838 CTGATCCCCGTGTTCGTGG 60.448 63.158 0.00 0.00 35.99 4.94
405 406 1.884075 CTGATCCCCGTGTTCGTGGA 61.884 60.000 0.00 0.00 46.30 4.02
406 407 1.447314 GATCCCCGTGTTCGTGGAC 60.447 63.158 0.00 0.00 45.23 4.02
407 408 3.291101 ATCCCCGTGTTCGTGGACG 62.291 63.158 0.00 0.00 45.23 4.79
411 412 2.430244 CGTGTTCGTGGACGGAGG 60.430 66.667 0.00 0.00 40.29 4.30
412 413 2.737376 GTGTTCGTGGACGGAGGC 60.737 66.667 0.00 0.00 40.29 4.70
413 414 4.351938 TGTTCGTGGACGGAGGCG 62.352 66.667 0.00 0.00 40.29 5.52
419 420 4.689549 TGGACGGAGGCGGGAGAA 62.690 66.667 0.00 0.00 0.00 2.87
420 421 3.387947 GGACGGAGGCGGGAGAAA 61.388 66.667 0.00 0.00 0.00 2.52
421 422 2.660802 GACGGAGGCGGGAGAAAA 59.339 61.111 0.00 0.00 0.00 2.29
422 423 1.221021 GACGGAGGCGGGAGAAAAT 59.779 57.895 0.00 0.00 0.00 1.82
423 424 0.392595 GACGGAGGCGGGAGAAAATT 60.393 55.000 0.00 0.00 0.00 1.82
424 425 0.037734 ACGGAGGCGGGAGAAAATTT 59.962 50.000 0.00 0.00 0.00 1.82
425 426 0.451783 CGGAGGCGGGAGAAAATTTG 59.548 55.000 0.00 0.00 0.00 2.32
426 427 1.545841 GGAGGCGGGAGAAAATTTGT 58.454 50.000 0.00 0.00 0.00 2.83
427 428 1.202348 GGAGGCGGGAGAAAATTTGTG 59.798 52.381 0.00 0.00 0.00 3.33
428 429 1.202348 GAGGCGGGAGAAAATTTGTGG 59.798 52.381 0.00 0.00 0.00 4.17
429 430 0.246360 GGCGGGAGAAAATTTGTGGG 59.754 55.000 0.00 0.00 0.00 4.61
430 431 0.966179 GCGGGAGAAAATTTGTGGGT 59.034 50.000 0.00 0.00 0.00 4.51
431 432 1.343142 GCGGGAGAAAATTTGTGGGTT 59.657 47.619 0.00 0.00 0.00 4.11
432 433 2.866065 GCGGGAGAAAATTTGTGGGTTG 60.866 50.000 0.00 0.00 0.00 3.77
433 434 2.288763 CGGGAGAAAATTTGTGGGTTGG 60.289 50.000 0.00 0.00 0.00 3.77
434 435 2.703536 GGGAGAAAATTTGTGGGTTGGT 59.296 45.455 0.00 0.00 0.00 3.67
435 436 3.135712 GGGAGAAAATTTGTGGGTTGGTT 59.864 43.478 0.00 0.00 0.00 3.67
436 437 4.345547 GGGAGAAAATTTGTGGGTTGGTTA 59.654 41.667 0.00 0.00 0.00 2.85
437 438 5.510690 GGGAGAAAATTTGTGGGTTGGTTAG 60.511 44.000 0.00 0.00 0.00 2.34
438 439 5.303333 GGAGAAAATTTGTGGGTTGGTTAGA 59.697 40.000 0.00 0.00 0.00 2.10
439 440 6.156748 AGAAAATTTGTGGGTTGGTTAGAC 57.843 37.500 0.00 0.00 0.00 2.59
440 441 4.948341 AAATTTGTGGGTTGGTTAGACC 57.052 40.909 0.00 0.00 39.22 3.85
441 442 3.895704 ATTTGTGGGTTGGTTAGACCT 57.104 42.857 0.00 0.00 39.58 3.85
442 443 2.649531 TTGTGGGTTGGTTAGACCTG 57.350 50.000 0.00 0.00 39.58 4.00
443 444 0.109723 TGTGGGTTGGTTAGACCTGC 59.890 55.000 0.00 0.00 39.58 4.85
444 445 0.608308 GTGGGTTGGTTAGACCTGCC 60.608 60.000 0.00 1.10 39.58 4.85
445 446 0.770557 TGGGTTGGTTAGACCTGCCT 60.771 55.000 0.00 0.00 39.58 4.75
446 447 0.404426 GGGTTGGTTAGACCTGCCTT 59.596 55.000 0.00 0.00 39.58 4.35
447 448 1.631898 GGGTTGGTTAGACCTGCCTTA 59.368 52.381 0.00 0.00 39.58 2.69
448 449 2.241430 GGGTTGGTTAGACCTGCCTTAT 59.759 50.000 0.00 0.00 39.58 1.73
449 450 3.457012 GGGTTGGTTAGACCTGCCTTATA 59.543 47.826 0.00 0.00 39.58 0.98
450 451 4.104261 GGGTTGGTTAGACCTGCCTTATAT 59.896 45.833 0.00 0.00 39.58 0.86
451 452 5.308759 GGGTTGGTTAGACCTGCCTTATATA 59.691 44.000 0.00 0.00 39.58 0.86
452 453 6.465084 GGTTGGTTAGACCTGCCTTATATAG 58.535 44.000 0.00 0.00 39.58 1.31
453 454 5.740290 TGGTTAGACCTGCCTTATATAGC 57.260 43.478 0.00 0.00 39.58 2.97
454 455 5.403512 TGGTTAGACCTGCCTTATATAGCT 58.596 41.667 0.00 0.00 39.58 3.32
455 456 5.246203 TGGTTAGACCTGCCTTATATAGCTG 59.754 44.000 0.00 0.00 39.58 4.24
458 459 2.409948 CCTGCCTTATATAGCTGGCC 57.590 55.000 15.98 0.00 44.32 5.36
459 460 1.630369 CCTGCCTTATATAGCTGGCCA 59.370 52.381 4.71 4.71 44.32 5.36
460 461 2.040278 CCTGCCTTATATAGCTGGCCAA 59.960 50.000 7.01 0.00 44.32 4.52
461 462 3.498481 CCTGCCTTATATAGCTGGCCAAA 60.498 47.826 7.01 0.00 44.32 3.28
462 463 4.338879 CTGCCTTATATAGCTGGCCAAAT 58.661 43.478 7.01 3.30 44.32 2.32
463 464 4.081406 TGCCTTATATAGCTGGCCAAATG 58.919 43.478 7.01 0.00 44.32 2.32
464 465 3.445096 GCCTTATATAGCTGGCCAAATGG 59.555 47.826 7.01 0.00 39.49 3.16
465 466 4.019174 CCTTATATAGCTGGCCAAATGGG 58.981 47.826 7.01 0.00 40.85 4.00
525 526 4.329545 GACTTGGGCCAGGCACGA 62.330 66.667 16.58 9.06 32.76 4.35
526 527 4.643387 ACTTGGGCCAGGCACGAC 62.643 66.667 16.58 0.34 32.76 4.34
527 528 4.641645 CTTGGGCCAGGCACGACA 62.642 66.667 15.19 3.34 32.76 4.35
528 529 4.947147 TTGGGCCAGGCACGACAC 62.947 66.667 15.19 0.00 32.76 3.67
538 539 3.152703 CACGACACGGGCTAAACG 58.847 61.111 0.00 0.00 37.36 3.60
539 540 2.048877 ACGACACGGGCTAAACGG 60.049 61.111 0.00 0.00 35.23 4.44
540 541 2.812178 CGACACGGGCTAAACGGG 60.812 66.667 0.00 0.00 41.32 5.28
542 543 2.344872 ACACGGGCTAAACGGGTC 59.655 61.111 0.00 0.00 46.33 4.46
543 544 2.812178 CACGGGCTAAACGGGTCG 60.812 66.667 0.00 0.00 35.23 4.79
544 545 4.073200 ACGGGCTAAACGGGTCGG 62.073 66.667 0.00 0.00 35.23 4.79
545 546 4.825252 CGGGCTAAACGGGTCGGG 62.825 72.222 0.00 0.00 0.00 5.14
597 598 3.922640 CCTGGAGGCTAGGCTCGC 61.923 72.222 32.76 26.27 0.00 5.03
598 599 4.277593 CTGGAGGCTAGGCTCGCG 62.278 72.222 32.76 23.91 0.00 5.87
625 626 2.124860 GGCACGGCCCGATTAAGT 60.125 61.111 11.71 0.00 44.06 2.24
626 627 1.747745 GGCACGGCCCGATTAAGTT 60.748 57.895 11.71 0.00 44.06 2.66
627 628 1.310216 GGCACGGCCCGATTAAGTTT 61.310 55.000 11.71 0.00 44.06 2.66
628 629 0.524414 GCACGGCCCGATTAAGTTTT 59.476 50.000 11.71 0.00 0.00 2.43
629 630 1.466866 GCACGGCCCGATTAAGTTTTC 60.467 52.381 11.71 0.00 0.00 2.29
630 631 2.081462 CACGGCCCGATTAAGTTTTCT 58.919 47.619 11.71 0.00 0.00 2.52
631 632 2.486592 CACGGCCCGATTAAGTTTTCTT 59.513 45.455 11.71 0.00 43.24 2.52
632 633 3.057806 CACGGCCCGATTAAGTTTTCTTT 60.058 43.478 11.71 0.00 40.91 2.52
633 634 4.154556 CACGGCCCGATTAAGTTTTCTTTA 59.845 41.667 11.71 0.00 40.91 1.85
634 635 4.945543 ACGGCCCGATTAAGTTTTCTTTAT 59.054 37.500 11.71 0.00 40.91 1.40
635 636 5.416639 ACGGCCCGATTAAGTTTTCTTTATT 59.583 36.000 11.71 0.00 40.91 1.40
636 637 6.071784 ACGGCCCGATTAAGTTTTCTTTATTT 60.072 34.615 11.71 0.00 40.91 1.40
637 638 6.809689 CGGCCCGATTAAGTTTTCTTTATTTT 59.190 34.615 0.00 0.00 40.91 1.82
638 639 7.329962 CGGCCCGATTAAGTTTTCTTTATTTTT 59.670 33.333 0.00 0.00 40.91 1.94
676 677 5.799827 TGGCCCAACATATAAAAATAGGC 57.200 39.130 0.00 0.00 37.14 3.93
677 678 5.463154 TGGCCCAACATATAAAAATAGGCT 58.537 37.500 0.00 0.00 37.98 4.58
678 679 6.615617 TGGCCCAACATATAAAAATAGGCTA 58.384 36.000 0.00 0.00 37.98 3.93
679 680 7.069986 TGGCCCAACATATAAAAATAGGCTAA 58.930 34.615 0.00 0.00 37.98 3.09
680 681 7.565398 TGGCCCAACATATAAAAATAGGCTAAA 59.435 33.333 0.00 0.00 37.98 1.85
681 682 8.425703 GGCCCAACATATAAAAATAGGCTAAAA 58.574 33.333 0.00 0.00 37.98 1.52
682 683 9.825109 GCCCAACATATAAAAATAGGCTAAAAA 57.175 29.630 0.00 0.00 35.00 1.94
687 688 9.946165 ACATATAAAAATAGGCTAAAAACGCTC 57.054 29.630 0.00 0.00 0.00 5.03
688 689 9.944663 CATATAAAAATAGGCTAAAAACGCTCA 57.055 29.630 0.00 0.00 0.00 4.26
690 691 5.959618 AAAATAGGCTAAAAACGCTCAGT 57.040 34.783 0.00 0.00 0.00 3.41
691 692 4.946784 AATAGGCTAAAAACGCTCAGTG 57.053 40.909 0.00 0.00 0.00 3.66
692 693 0.875059 AGGCTAAAAACGCTCAGTGC 59.125 50.000 0.00 0.00 38.57 4.40
704 705 3.259207 GCTCAGTGCGGCAAATAATAG 57.741 47.619 3.23 0.00 0.00 1.73
705 706 2.872245 GCTCAGTGCGGCAAATAATAGA 59.128 45.455 3.23 0.00 0.00 1.98
706 707 3.303395 GCTCAGTGCGGCAAATAATAGAC 60.303 47.826 3.23 0.00 0.00 2.59
707 708 4.122776 CTCAGTGCGGCAAATAATAGACT 58.877 43.478 3.23 0.00 0.00 3.24
708 709 3.871006 TCAGTGCGGCAAATAATAGACTG 59.129 43.478 3.23 4.63 0.00 3.51
709 710 3.871006 CAGTGCGGCAAATAATAGACTGA 59.129 43.478 3.23 0.00 32.98 3.41
710 711 4.332543 CAGTGCGGCAAATAATAGACTGAA 59.667 41.667 3.23 0.00 32.98 3.02
711 712 4.941263 AGTGCGGCAAATAATAGACTGAAA 59.059 37.500 3.23 0.00 0.00 2.69
712 713 5.414454 AGTGCGGCAAATAATAGACTGAAAA 59.586 36.000 3.23 0.00 0.00 2.29
713 714 6.095440 AGTGCGGCAAATAATAGACTGAAAAT 59.905 34.615 3.23 0.00 0.00 1.82
714 715 7.282224 AGTGCGGCAAATAATAGACTGAAAATA 59.718 33.333 3.23 0.00 0.00 1.40
715 716 8.076178 GTGCGGCAAATAATAGACTGAAAATAT 58.924 33.333 3.23 0.00 0.00 1.28
716 717 8.075574 TGCGGCAAATAATAGACTGAAAATATG 58.924 33.333 0.00 0.00 0.00 1.78
717 718 7.061094 GCGGCAAATAATAGACTGAAAATATGC 59.939 37.037 0.00 0.00 0.00 3.14
718 719 7.269084 CGGCAAATAATAGACTGAAAATATGCG 59.731 37.037 0.00 0.00 0.00 4.73
719 720 7.538678 GGCAAATAATAGACTGAAAATATGCGG 59.461 37.037 0.00 0.00 0.00 5.69
720 721 7.061094 GCAAATAATAGACTGAAAATATGCGGC 59.939 37.037 0.00 0.00 0.00 6.53
721 722 6.743575 ATAATAGACTGAAAATATGCGGCC 57.256 37.500 0.00 0.00 0.00 6.13
722 723 1.680338 AGACTGAAAATATGCGGCCC 58.320 50.000 0.00 0.00 0.00 5.80
723 724 1.064758 AGACTGAAAATATGCGGCCCA 60.065 47.619 0.00 0.00 0.00 5.36
724 725 1.065551 GACTGAAAATATGCGGCCCAC 59.934 52.381 0.00 0.00 0.00 4.61
725 726 0.385390 CTGAAAATATGCGGCCCACC 59.615 55.000 0.00 0.00 0.00 4.61
743 744 2.559330 GTGCTAAACGGGCCAACG 59.441 61.111 4.39 1.48 40.31 4.10
755 756 2.990967 CCAACGTGCCAGCCCATT 60.991 61.111 0.00 0.00 0.00 3.16
756 757 2.573083 CCAACGTGCCAGCCCATTT 61.573 57.895 0.00 0.00 0.00 2.32
757 758 1.247419 CCAACGTGCCAGCCCATTTA 61.247 55.000 0.00 0.00 0.00 1.40
758 759 0.109319 CAACGTGCCAGCCCATTTAC 60.109 55.000 0.00 0.00 0.00 2.01
759 760 0.251165 AACGTGCCAGCCCATTTACT 60.251 50.000 0.00 0.00 0.00 2.24
760 761 0.616371 ACGTGCCAGCCCATTTACTA 59.384 50.000 0.00 0.00 0.00 1.82
761 762 1.003812 ACGTGCCAGCCCATTTACTAA 59.996 47.619 0.00 0.00 0.00 2.24
762 763 2.297701 CGTGCCAGCCCATTTACTAAT 58.702 47.619 0.00 0.00 0.00 1.73
763 764 2.687935 CGTGCCAGCCCATTTACTAATT 59.312 45.455 0.00 0.00 0.00 1.40
764 765 3.489059 CGTGCCAGCCCATTTACTAATTG 60.489 47.826 0.00 0.00 0.00 2.32
765 766 3.030291 TGCCAGCCCATTTACTAATTGG 58.970 45.455 3.56 3.56 31.31 3.16
766 767 2.365293 GCCAGCCCATTTACTAATTGGG 59.635 50.000 18.87 18.87 36.22 4.12
767 768 3.642141 CCAGCCCATTTACTAATTGGGT 58.358 45.455 21.98 11.52 37.66 4.51
768 769 4.030216 CCAGCCCATTTACTAATTGGGTT 58.970 43.478 21.98 16.72 35.69 4.11
769 770 4.141959 CCAGCCCATTTACTAATTGGGTTG 60.142 45.833 25.01 25.01 39.77 3.77
770 771 4.466015 CAGCCCATTTACTAATTGGGTTGT 59.534 41.667 24.29 12.32 35.69 3.32
771 772 4.466015 AGCCCATTTACTAATTGGGTTGTG 59.534 41.667 21.98 5.23 34.59 3.33
772 773 4.754322 CCCATTTACTAATTGGGTTGTGC 58.246 43.478 16.30 0.00 32.16 4.57
773 774 4.382577 CCCATTTACTAATTGGGTTGTGCC 60.383 45.833 16.30 0.00 32.16 5.01
816 817 2.420043 CCCACACGGCCCGTATAG 59.580 66.667 9.25 0.00 38.32 1.31
817 818 2.428925 CCCACACGGCCCGTATAGT 61.429 63.158 9.25 0.00 38.32 2.12
818 819 1.108727 CCCACACGGCCCGTATAGTA 61.109 60.000 9.25 0.00 38.32 1.82
819 820 0.746063 CCACACGGCCCGTATAGTAA 59.254 55.000 9.25 0.00 38.32 2.24
820 821 1.342174 CCACACGGCCCGTATAGTAAT 59.658 52.381 9.25 0.00 38.32 1.89
821 822 2.608752 CCACACGGCCCGTATAGTAATC 60.609 54.545 9.25 0.00 38.32 1.75
822 823 1.267806 ACACGGCCCGTATAGTAATCG 59.732 52.381 9.25 0.00 38.32 3.34
823 824 1.267806 CACGGCCCGTATAGTAATCGT 59.732 52.381 9.25 0.00 38.32 3.73
824 825 1.267806 ACGGCCCGTATAGTAATCGTG 59.732 52.381 7.20 0.00 38.73 4.35
825 826 1.706443 GGCCCGTATAGTAATCGTGC 58.294 55.000 0.00 0.00 0.00 5.34
826 827 1.670967 GGCCCGTATAGTAATCGTGCC 60.671 57.143 7.70 7.70 40.23 5.01
827 828 1.670967 GCCCGTATAGTAATCGTGCCC 60.671 57.143 0.00 0.00 0.00 5.36
828 829 1.891150 CCCGTATAGTAATCGTGCCCT 59.109 52.381 0.00 0.00 0.00 5.19
829 830 2.352421 CCCGTATAGTAATCGTGCCCTG 60.352 54.545 0.00 0.00 0.00 4.45
830 831 2.352421 CCGTATAGTAATCGTGCCCTGG 60.352 54.545 0.00 0.00 0.00 4.45
831 832 2.685100 GTATAGTAATCGTGCCCTGGC 58.315 52.381 0.00 0.00 42.35 4.85
832 833 0.033504 ATAGTAATCGTGCCCTGGCG 59.966 55.000 3.32 0.00 45.51 5.69
833 834 2.023414 TAGTAATCGTGCCCTGGCGG 62.023 60.000 3.32 0.00 45.51 6.13
859 860 2.270850 GGGCCAGGCACGATTACA 59.729 61.111 15.19 0.00 0.00 2.41
860 861 1.377987 GGGCCAGGCACGATTACAA 60.378 57.895 15.19 0.00 0.00 2.41
861 862 0.751643 GGGCCAGGCACGATTACAAT 60.752 55.000 15.19 0.00 0.00 2.71
862 863 0.381801 GGCCAGGCACGATTACAATG 59.618 55.000 15.19 0.00 0.00 2.82
863 864 0.381801 GCCAGGCACGATTACAATGG 59.618 55.000 6.55 0.00 0.00 3.16
864 865 1.024271 CCAGGCACGATTACAATGGG 58.976 55.000 0.00 0.00 0.00 4.00
865 866 0.381801 CAGGCACGATTACAATGGGC 59.618 55.000 0.00 0.00 0.00 5.36
866 867 0.751643 AGGCACGATTACAATGGGCC 60.752 55.000 0.00 0.00 40.18 5.80
867 868 1.355210 GCACGATTACAATGGGCCG 59.645 57.895 0.00 0.00 0.00 6.13
868 869 2.021722 CACGATTACAATGGGCCGG 58.978 57.895 0.00 0.00 0.00 6.13
869 870 1.153046 ACGATTACAATGGGCCGGG 60.153 57.895 2.18 0.00 0.00 5.73
870 871 2.551912 CGATTACAATGGGCCGGGC 61.552 63.158 22.00 22.00 0.00 6.13
897 898 3.196648 CCGTTTGGCCAGGTATGC 58.803 61.111 5.11 0.00 0.00 3.14
898 899 1.378514 CCGTTTGGCCAGGTATGCT 60.379 57.895 5.11 0.00 0.00 3.79
899 900 1.656818 CCGTTTGGCCAGGTATGCTG 61.657 60.000 5.11 0.00 0.00 4.41
900 901 1.512694 GTTTGGCCAGGTATGCTGC 59.487 57.895 5.11 0.00 0.00 5.25
901 902 1.682005 TTTGGCCAGGTATGCTGCC 60.682 57.895 5.11 0.00 44.27 4.85
912 913 1.405463 GTATGCTGCCTTAGTTTGCCC 59.595 52.381 0.00 0.00 0.00 5.36
913 914 0.972471 ATGCTGCCTTAGTTTGCCCC 60.972 55.000 0.00 0.00 0.00 5.80
914 915 2.351244 GCTGCCTTAGTTTGCCCCC 61.351 63.158 0.00 0.00 0.00 5.40
915 916 1.076549 CTGCCTTAGTTTGCCCCCA 59.923 57.895 0.00 0.00 0.00 4.96
968 969 4.394102 GGCTTAGCCCCTCTGGTA 57.606 61.111 13.12 0.00 44.06 3.25
970 971 0.981277 GGCTTAGCCCCTCTGGTACA 60.981 60.000 13.12 0.00 44.06 2.90
971 972 0.178301 GCTTAGCCCCTCTGGTACAC 59.822 60.000 0.00 0.00 36.04 2.90
972 973 0.831307 CTTAGCCCCTCTGGTACACC 59.169 60.000 0.00 0.00 36.04 4.16
973 974 0.117541 TTAGCCCCTCTGGTACACCA 59.882 55.000 0.28 0.28 45.30 4.17
974 975 0.616679 TAGCCCCTCTGGTACACCAC 60.617 60.000 0.00 0.00 42.01 4.16
975 976 2.221299 GCCCCTCTGGTACACCACA 61.221 63.158 0.00 0.00 42.01 4.17
976 977 1.983224 CCCCTCTGGTACACCACAG 59.017 63.158 0.00 0.00 42.01 3.66
977 978 0.836400 CCCCTCTGGTACACCACAGT 60.836 60.000 0.00 0.00 42.01 3.55
1067 1088 1.526917 GCCTCCTATGCACGGCAAT 60.527 57.895 2.68 0.00 43.62 3.56
1069 1090 0.179048 CCTCCTATGCACGGCAATCA 60.179 55.000 2.68 0.00 43.62 2.57
1079 1100 3.187058 GGCAATCACCGATGCGTT 58.813 55.556 0.00 0.00 0.00 4.84
1088 1109 4.547367 CGATGCGTTCCCCTCCCC 62.547 72.222 0.00 0.00 0.00 4.81
1090 1111 3.406595 GATGCGTTCCCCTCCCCAG 62.407 68.421 0.00 0.00 0.00 4.45
1542 1563 2.627217 GGAGGCTTTCCTAGGGAGAGAA 60.627 54.545 9.46 0.00 44.46 2.87
1633 1654 2.039084 CTGGATGCCTAGGTGGTAATCC 59.961 54.545 11.31 14.65 44.56 3.01
1638 1659 4.274794 TGCCTAGGTGGTAATCCTCTTA 57.725 45.455 11.31 0.00 38.35 2.10
1639 1660 4.223953 TGCCTAGGTGGTAATCCTCTTAG 58.776 47.826 11.31 0.00 36.95 2.18
1653 1674 7.707624 AATCCTCTTAGTTTGATTGATTGCA 57.292 32.000 0.00 0.00 0.00 4.08
1687 1759 4.997395 GGTCTCTTAACACTGCATTTCTGA 59.003 41.667 0.00 0.00 0.00 3.27
1725 1797 2.742589 GTTGTAGTTTGTAGCCTCCTGC 59.257 50.000 0.00 0.00 41.71 4.85
1754 1834 8.677148 ATATTTAAATGTCTGTTATGGCGAGT 57.323 30.769 11.05 0.00 0.00 4.18
1769 1849 1.135689 GCGAGTGGCGATTTTCATTGT 60.136 47.619 0.00 0.00 44.57 2.71
1887 1967 2.867647 GCTGCCCCTTAAGCTTTTTGTG 60.868 50.000 3.20 0.00 36.47 3.33
1928 2008 3.056322 GGCCTCTCATTGTGATTTGCTTT 60.056 43.478 0.00 0.00 0.00 3.51
2045 2125 7.521509 CTGATTCAATCTGCAAATTTTCCTC 57.478 36.000 0.00 0.00 0.00 3.71
2148 2228 9.317936 CAATTTGTAAGCACTAGATGACATCTA 57.682 33.333 21.26 21.26 40.76 1.98
2186 2266 7.652507 AGCTTGTTCAGTTTGTAAGTACTAGAC 59.347 37.037 0.00 0.00 0.00 2.59
2188 2268 6.441274 TGTTCAGTTTGTAAGTACTAGACGG 58.559 40.000 0.00 0.00 0.00 4.79
2206 2286 4.516698 AGACGGCATCCACAATAATGATTC 59.483 41.667 0.00 0.00 0.00 2.52
2210 2290 5.561532 CGGCATCCACAATAATGATTCTGTC 60.562 44.000 0.00 0.00 0.00 3.51
2221 2301 5.362556 AATGATTCTGTCCAGTTTGTTCG 57.637 39.130 0.00 0.00 0.00 3.95
2269 2349 9.098355 CCGTGATGATAAAGATCTACAAGAAAA 57.902 33.333 0.00 0.00 32.79 2.29
2314 2394 4.505566 CCTGTGGACAATCCTTCAAAGAGA 60.506 45.833 0.00 0.00 37.46 3.10
2539 2620 5.359009 CCTTGGTTGATCATGCATTTCTAGT 59.641 40.000 0.00 0.00 0.00 2.57
2651 2733 5.011533 CCAATGGTTTTGGTGTTTCCATCTA 59.988 40.000 0.00 0.00 46.60 1.98
2723 2806 7.285401 TGTTCTTTTTGGCTTTAGTCTCATCTT 59.715 33.333 0.00 0.00 0.00 2.40
2786 2869 2.085118 TGGGAATATGGTGCCAATGG 57.915 50.000 0.00 0.00 35.84 3.16
2890 2973 5.356751 GGACATGTAACTTATGTGATGCCAA 59.643 40.000 0.00 0.00 38.78 4.52
2948 3031 2.556622 CGTATGGTTTGGCTGGAAGTTT 59.443 45.455 0.00 0.00 35.30 2.66
3028 3111 8.882415 TTAGACGAAATAGAAACAGTTGACTT 57.118 30.769 0.00 0.00 0.00 3.01
3088 3171 9.906660 CTATTTGCCTAACAAGTGTTTGAATTA 57.093 29.630 1.35 0.00 40.06 1.40
3147 3230 2.292828 ACATTGTTTGGAGGGTCTGG 57.707 50.000 0.00 0.00 0.00 3.86
3301 3384 2.740447 GGTAAACCGAAGTGACATGTCC 59.260 50.000 22.85 13.88 0.00 4.02
3703 3786 2.122813 CCCTCCCCAGCGACCTAT 60.123 66.667 0.00 0.00 0.00 2.57
3811 3894 4.214971 CCAACTGCACCAGATATTCATAGC 59.785 45.833 0.00 0.00 35.18 2.97
3849 3932 3.826157 GGAATGTTCATCAAGTTGGACCA 59.174 43.478 2.34 0.00 0.00 4.02
3919 4002 5.059833 GTGGGTCCTGATCTTGATTCATAC 58.940 45.833 0.00 0.00 0.00 2.39
4234 4317 2.544267 GCCGTTGTATACCAGCTTGATC 59.456 50.000 0.00 0.00 0.00 2.92
4247 4330 0.606401 CTTGATCGGGGCACAGTTGT 60.606 55.000 0.00 0.00 0.00 3.32
4277 4360 2.037641 TCATGGCACTATCATTCCGAGG 59.962 50.000 0.00 0.00 0.00 4.63
4618 4703 1.330306 CTGCCAAATTTCTTGCGACG 58.670 50.000 0.00 0.00 0.00 5.12
4625 4710 0.798776 ATTTCTTGCGACGAAGGCAG 59.201 50.000 0.00 0.00 42.12 4.85
4749 4834 9.135843 TCGTTTTAGTCAACAATCATGTACTAG 57.864 33.333 0.00 0.00 39.40 2.57
5055 5204 6.072112 ACATCAGTTTGGTGTCACATAAAC 57.928 37.500 19.46 19.46 37.00 2.01
5061 5382 7.717436 TCAGTTTGGTGTCACATAAACTCATAA 59.283 33.333 23.74 13.33 40.32 1.90
5110 5438 2.880443 ACAGGACCAGCATTTTGTCAT 58.120 42.857 0.00 0.00 0.00 3.06
5135 5463 1.270678 GCCACCGTGTACTTTCTTCCT 60.271 52.381 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.809241 GCTTCTGTGGATCTCAGGCG 60.809 60.000 14.78 9.40 34.15 5.52
1 2 0.251354 TGCTTCTGTGGATCTCAGGC 59.749 55.000 14.78 12.34 34.15 4.85
2 3 1.406614 GGTGCTTCTGTGGATCTCAGG 60.407 57.143 14.78 5.17 34.15 3.86
3 4 1.406614 GGGTGCTTCTGTGGATCTCAG 60.407 57.143 10.62 10.62 0.00 3.35
4 5 0.615331 GGGTGCTTCTGTGGATCTCA 59.385 55.000 0.00 0.00 0.00 3.27
5 6 0.908198 AGGGTGCTTCTGTGGATCTC 59.092 55.000 0.00 0.00 0.00 2.75
6 7 0.908198 GAGGGTGCTTCTGTGGATCT 59.092 55.000 0.00 0.00 0.00 2.75
7 8 0.908198 AGAGGGTGCTTCTGTGGATC 59.092 55.000 0.00 0.00 0.00 3.36
8 9 1.366319 AAGAGGGTGCTTCTGTGGAT 58.634 50.000 0.00 0.00 0.00 3.41
9 10 1.140312 AAAGAGGGTGCTTCTGTGGA 58.860 50.000 0.00 0.00 0.00 4.02
10 11 1.242076 CAAAGAGGGTGCTTCTGTGG 58.758 55.000 0.00 0.00 0.00 4.17
11 12 0.595095 GCAAAGAGGGTGCTTCTGTG 59.405 55.000 0.00 0.00 39.00 3.66
12 13 3.027419 GCAAAGAGGGTGCTTCTGT 57.973 52.632 0.00 0.00 39.00 3.41
19 20 0.538057 TTGGAGCAGCAAAGAGGGTG 60.538 55.000 0.00 0.00 39.22 4.61
20 21 0.407139 ATTGGAGCAGCAAAGAGGGT 59.593 50.000 0.00 0.00 0.00 4.34
21 22 0.815734 CATTGGAGCAGCAAAGAGGG 59.184 55.000 0.00 0.00 0.00 4.30
22 23 1.743958 CTCATTGGAGCAGCAAAGAGG 59.256 52.381 0.00 0.00 33.67 3.69
33 34 1.303799 AACTGCGCTGCTCATTGGAG 61.304 55.000 14.80 0.00 44.33 3.86
34 35 1.302752 AACTGCGCTGCTCATTGGA 60.303 52.632 14.80 0.00 0.00 3.53
35 36 1.154093 CAACTGCGCTGCTCATTGG 60.154 57.895 14.80 0.00 0.00 3.16
36 37 1.154093 CCAACTGCGCTGCTCATTG 60.154 57.895 14.80 10.78 0.00 2.82
37 38 1.302752 TCCAACTGCGCTGCTCATT 60.303 52.632 14.80 0.00 0.00 2.57
38 39 2.037136 GTCCAACTGCGCTGCTCAT 61.037 57.895 14.80 0.00 0.00 2.90
39 40 2.666190 GTCCAACTGCGCTGCTCA 60.666 61.111 14.80 0.00 0.00 4.26
40 41 0.740868 TATGTCCAACTGCGCTGCTC 60.741 55.000 14.80 1.57 0.00 4.26
41 42 0.742281 CTATGTCCAACTGCGCTGCT 60.742 55.000 14.80 0.00 0.00 4.24
42 43 1.709147 CCTATGTCCAACTGCGCTGC 61.709 60.000 14.80 0.00 0.00 5.25
43 44 1.091771 CCCTATGTCCAACTGCGCTG 61.092 60.000 13.23 13.23 0.00 5.18
44 45 1.221840 CCCTATGTCCAACTGCGCT 59.778 57.895 9.73 0.00 0.00 5.92
45 46 0.392461 TTCCCTATGTCCAACTGCGC 60.392 55.000 0.00 0.00 0.00 6.09
46 47 1.207089 TCTTCCCTATGTCCAACTGCG 59.793 52.381 0.00 0.00 0.00 5.18
47 48 3.567478 ATCTTCCCTATGTCCAACTGC 57.433 47.619 0.00 0.00 0.00 4.40
48 49 5.513788 CCCATATCTTCCCTATGTCCAACTG 60.514 48.000 0.00 0.00 0.00 3.16
49 50 4.599241 CCCATATCTTCCCTATGTCCAACT 59.401 45.833 0.00 0.00 0.00 3.16
50 51 4.263506 CCCCATATCTTCCCTATGTCCAAC 60.264 50.000 0.00 0.00 0.00 3.77
51 52 3.916349 CCCCATATCTTCCCTATGTCCAA 59.084 47.826 0.00 0.00 0.00 3.53
52 53 3.531059 CCCCATATCTTCCCTATGTCCA 58.469 50.000 0.00 0.00 0.00 4.02
53 54 2.846827 CCCCCATATCTTCCCTATGTCC 59.153 54.545 0.00 0.00 0.00 4.02
54 55 3.803340 TCCCCCATATCTTCCCTATGTC 58.197 50.000 0.00 0.00 0.00 3.06
55 56 3.963525 TCCCCCATATCTTCCCTATGT 57.036 47.619 0.00 0.00 0.00 2.29
56 57 4.438913 TCTTCCCCCATATCTTCCCTATG 58.561 47.826 0.00 0.00 0.00 2.23
57 58 4.803572 TCTTCCCCCATATCTTCCCTAT 57.196 45.455 0.00 0.00 0.00 2.57
58 59 4.586675 TTCTTCCCCCATATCTTCCCTA 57.413 45.455 0.00 0.00 0.00 3.53
59 60 3.455085 TTCTTCCCCCATATCTTCCCT 57.545 47.619 0.00 0.00 0.00 4.20
60 61 5.760131 CATATTCTTCCCCCATATCTTCCC 58.240 45.833 0.00 0.00 0.00 3.97
61 62 5.196695 GCATATTCTTCCCCCATATCTTCC 58.803 45.833 0.00 0.00 0.00 3.46
62 63 5.044550 AGGCATATTCTTCCCCCATATCTTC 60.045 44.000 0.00 0.00 0.00 2.87
63 64 4.860278 AGGCATATTCTTCCCCCATATCTT 59.140 41.667 0.00 0.00 0.00 2.40
64 65 4.452270 AGGCATATTCTTCCCCCATATCT 58.548 43.478 0.00 0.00 0.00 1.98
65 66 4.476479 AGAGGCATATTCTTCCCCCATATC 59.524 45.833 0.00 0.00 0.00 1.63
66 67 4.452270 AGAGGCATATTCTTCCCCCATAT 58.548 43.478 0.00 0.00 0.00 1.78
67 68 3.886938 AGAGGCATATTCTTCCCCCATA 58.113 45.455 0.00 0.00 0.00 2.74
68 69 2.723342 AGAGGCATATTCTTCCCCCAT 58.277 47.619 0.00 0.00 0.00 4.00
69 70 2.212752 AGAGGCATATTCTTCCCCCA 57.787 50.000 0.00 0.00 0.00 4.96
70 71 2.573915 CCTAGAGGCATATTCTTCCCCC 59.426 54.545 0.00 0.00 0.00 5.40
71 72 2.573915 CCCTAGAGGCATATTCTTCCCC 59.426 54.545 0.00 0.00 0.00 4.81
72 73 3.990959 CCCTAGAGGCATATTCTTCCC 57.009 52.381 0.00 0.00 0.00 3.97
84 85 4.860881 TGCCGGGAGCCCTAGAGG 62.861 72.222 2.18 0.00 42.71 3.69
85 86 3.230245 CTGCCGGGAGCCCTAGAG 61.230 72.222 11.10 0.00 42.71 2.43
86 87 4.075793 ACTGCCGGGAGCCCTAGA 62.076 66.667 24.53 0.00 42.71 2.43
87 88 3.541713 GACTGCCGGGAGCCCTAG 61.542 72.222 24.53 0.00 42.71 3.02
105 106 1.669760 TTTGACAGCCCGCTAACCG 60.670 57.895 0.00 0.00 0.00 4.44
106 107 0.887387 TGTTTGACAGCCCGCTAACC 60.887 55.000 0.00 0.00 0.00 2.85
107 108 1.135689 CATGTTTGACAGCCCGCTAAC 60.136 52.381 0.00 0.00 0.00 2.34
108 109 1.164411 CATGTTTGACAGCCCGCTAA 58.836 50.000 0.00 0.00 0.00 3.09
109 110 0.676466 CCATGTTTGACAGCCCGCTA 60.676 55.000 0.00 0.00 0.00 4.26
110 111 1.973281 CCATGTTTGACAGCCCGCT 60.973 57.895 0.00 0.00 0.00 5.52
111 112 2.568090 CCATGTTTGACAGCCCGC 59.432 61.111 0.00 0.00 0.00 6.13
112 113 2.342650 CCCCATGTTTGACAGCCCG 61.343 63.158 0.00 0.00 0.00 6.13
113 114 0.541764 TTCCCCATGTTTGACAGCCC 60.542 55.000 0.00 0.00 0.00 5.19
114 115 0.890683 CTTCCCCATGTTTGACAGCC 59.109 55.000 0.00 0.00 0.00 4.85
115 116 1.541588 GTCTTCCCCATGTTTGACAGC 59.458 52.381 0.00 0.00 0.00 4.40
116 117 2.862541 TGTCTTCCCCATGTTTGACAG 58.137 47.619 0.00 0.00 31.87 3.51
117 118 3.221771 CTTGTCTTCCCCATGTTTGACA 58.778 45.455 0.00 0.00 33.41 3.58
118 119 2.029918 GCTTGTCTTCCCCATGTTTGAC 60.030 50.000 0.00 0.00 0.00 3.18
119 120 2.158475 AGCTTGTCTTCCCCATGTTTGA 60.158 45.455 0.00 0.00 0.00 2.69
120 121 2.029649 CAGCTTGTCTTCCCCATGTTTG 60.030 50.000 0.00 0.00 0.00 2.93
121 122 2.242043 CAGCTTGTCTTCCCCATGTTT 58.758 47.619 0.00 0.00 0.00 2.83
122 123 1.915141 CAGCTTGTCTTCCCCATGTT 58.085 50.000 0.00 0.00 0.00 2.71
123 124 0.610232 GCAGCTTGTCTTCCCCATGT 60.610 55.000 0.00 0.00 0.00 3.21
124 125 1.651240 CGCAGCTTGTCTTCCCCATG 61.651 60.000 0.00 0.00 0.00 3.66
125 126 1.377725 CGCAGCTTGTCTTCCCCAT 60.378 57.895 0.00 0.00 0.00 4.00
126 127 2.032528 CGCAGCTTGTCTTCCCCA 59.967 61.111 0.00 0.00 0.00 4.96
127 128 2.747855 CCGCAGCTTGTCTTCCCC 60.748 66.667 0.00 0.00 0.00 4.81
128 129 2.747855 CCCGCAGCTTGTCTTCCC 60.748 66.667 0.00 0.00 0.00 3.97
129 130 3.435186 GCCCGCAGCTTGTCTTCC 61.435 66.667 0.00 0.00 38.99 3.46
130 131 3.793144 CGCCCGCAGCTTGTCTTC 61.793 66.667 0.00 0.00 40.39 2.87
131 132 4.314440 TCGCCCGCAGCTTGTCTT 62.314 61.111 0.00 0.00 40.39 3.01
136 137 2.813226 TTTATGGTCGCCCGCAGCTT 62.813 55.000 0.00 0.00 40.39 3.74
137 138 3.323758 TTTATGGTCGCCCGCAGCT 62.324 57.895 0.00 0.00 40.39 4.24
138 139 2.822255 TTTATGGTCGCCCGCAGC 60.822 61.111 0.00 0.00 38.52 5.25
139 140 0.179094 TAGTTTATGGTCGCCCGCAG 60.179 55.000 0.00 0.00 0.00 5.18
140 141 0.179094 CTAGTTTATGGTCGCCCGCA 60.179 55.000 0.00 0.00 0.00 5.69
141 142 0.179092 ACTAGTTTATGGTCGCCCGC 60.179 55.000 0.00 0.00 0.00 6.13
142 143 1.567504 CACTAGTTTATGGTCGCCCG 58.432 55.000 0.00 0.00 0.00 6.13
143 144 1.296727 GCACTAGTTTATGGTCGCCC 58.703 55.000 0.00 0.00 0.00 6.13
144 145 1.933853 CTGCACTAGTTTATGGTCGCC 59.066 52.381 0.00 0.00 0.00 5.54
145 146 2.348666 CACTGCACTAGTTTATGGTCGC 59.651 50.000 0.00 0.00 37.60 5.19
146 147 3.585862 ACACTGCACTAGTTTATGGTCG 58.414 45.455 0.00 0.00 37.60 4.79
147 148 7.611213 AAATACACTGCACTAGTTTATGGTC 57.389 36.000 0.00 0.00 37.60 4.02
148 149 9.109393 CATAAATACACTGCACTAGTTTATGGT 57.891 33.333 0.00 0.00 37.60 3.55
149 150 9.109393 ACATAAATACACTGCACTAGTTTATGG 57.891 33.333 19.84 0.00 38.99 2.74
151 152 9.031360 CGACATAAATACACTGCACTAGTTTAT 57.969 33.333 0.00 0.00 37.60 1.40
152 153 7.009815 GCGACATAAATACACTGCACTAGTTTA 59.990 37.037 0.00 0.00 37.60 2.01
153 154 6.183360 GCGACATAAATACACTGCACTAGTTT 60.183 38.462 0.00 0.00 37.60 2.66
154 155 5.291128 GCGACATAAATACACTGCACTAGTT 59.709 40.000 0.00 0.00 37.60 2.24
155 156 4.804139 GCGACATAAATACACTGCACTAGT 59.196 41.667 0.00 0.00 41.36 2.57
156 157 4.085568 CGCGACATAAATACACTGCACTAG 60.086 45.833 0.00 0.00 0.00 2.57
157 158 3.794564 CGCGACATAAATACACTGCACTA 59.205 43.478 0.00 0.00 0.00 2.74
158 159 2.603110 CGCGACATAAATACACTGCACT 59.397 45.455 0.00 0.00 0.00 4.40
159 160 2.285602 CCGCGACATAAATACACTGCAC 60.286 50.000 8.23 0.00 0.00 4.57
160 161 1.930503 CCGCGACATAAATACACTGCA 59.069 47.619 8.23 0.00 0.00 4.41
161 162 1.260561 CCCGCGACATAAATACACTGC 59.739 52.381 8.23 0.00 0.00 4.40
162 163 2.816689 TCCCGCGACATAAATACACTG 58.183 47.619 8.23 0.00 0.00 3.66
163 164 3.530265 TTCCCGCGACATAAATACACT 57.470 42.857 8.23 0.00 0.00 3.55
164 165 3.805422 TCATTCCCGCGACATAAATACAC 59.195 43.478 8.23 0.00 0.00 2.90
165 166 4.061357 TCATTCCCGCGACATAAATACA 57.939 40.909 8.23 0.00 0.00 2.29
166 167 4.610680 GCTTCATTCCCGCGACATAAATAC 60.611 45.833 8.23 0.00 0.00 1.89
167 168 3.496884 GCTTCATTCCCGCGACATAAATA 59.503 43.478 8.23 0.00 0.00 1.40
168 169 2.290641 GCTTCATTCCCGCGACATAAAT 59.709 45.455 8.23 0.00 0.00 1.40
169 170 1.668751 GCTTCATTCCCGCGACATAAA 59.331 47.619 8.23 0.00 0.00 1.40
170 171 1.134521 AGCTTCATTCCCGCGACATAA 60.135 47.619 8.23 0.00 0.00 1.90
171 172 0.464036 AGCTTCATTCCCGCGACATA 59.536 50.000 8.23 0.00 0.00 2.29
172 173 0.811616 GAGCTTCATTCCCGCGACAT 60.812 55.000 8.23 0.00 0.00 3.06
173 174 1.447838 GAGCTTCATTCCCGCGACA 60.448 57.895 8.23 0.00 0.00 4.35
174 175 2.174319 GGAGCTTCATTCCCGCGAC 61.174 63.158 8.23 0.00 0.00 5.19
175 176 2.186903 GGAGCTTCATTCCCGCGA 59.813 61.111 8.23 0.00 0.00 5.87
176 177 2.125147 TGGAGCTTCATTCCCGCG 60.125 61.111 0.00 0.00 33.62 6.46
177 178 0.749454 ATGTGGAGCTTCATTCCCGC 60.749 55.000 0.00 0.00 33.62 6.13
178 179 1.019673 CATGTGGAGCTTCATTCCCG 58.980 55.000 0.00 0.00 33.62 5.14
179 180 2.019984 GTCATGTGGAGCTTCATTCCC 58.980 52.381 0.00 0.00 33.62 3.97
180 181 2.019984 GGTCATGTGGAGCTTCATTCC 58.980 52.381 0.00 0.00 40.87 3.01
181 182 1.667724 CGGTCATGTGGAGCTTCATTC 59.332 52.381 0.00 0.00 41.89 2.67
182 183 1.003580 ACGGTCATGTGGAGCTTCATT 59.996 47.619 0.00 0.00 41.89 2.57
183 184 0.615331 ACGGTCATGTGGAGCTTCAT 59.385 50.000 0.00 0.00 41.89 2.57
184 185 1.067142 GTACGGTCATGTGGAGCTTCA 60.067 52.381 0.00 0.00 41.89 3.02
185 186 1.641577 GTACGGTCATGTGGAGCTTC 58.358 55.000 0.00 0.00 41.89 3.86
186 187 0.108804 CGTACGGTCATGTGGAGCTT 60.109 55.000 7.57 0.00 41.89 3.74
187 188 1.248785 ACGTACGGTCATGTGGAGCT 61.249 55.000 21.06 0.00 41.89 4.09
188 189 1.076533 CACGTACGGTCATGTGGAGC 61.077 60.000 21.06 0.00 40.65 4.70
189 190 1.076533 GCACGTACGGTCATGTGGAG 61.077 60.000 21.06 0.00 36.20 3.86
190 191 1.080366 GCACGTACGGTCATGTGGA 60.080 57.895 21.06 0.00 36.20 4.02
191 192 1.373622 TGCACGTACGGTCATGTGG 60.374 57.895 21.06 0.00 36.20 4.17
192 193 0.941936 TGTGCACGTACGGTCATGTG 60.942 55.000 21.06 8.57 38.28 3.21
193 194 0.037697 ATGTGCACGTACGGTCATGT 60.038 50.000 21.06 6.73 0.00 3.21
194 195 1.852280 CTATGTGCACGTACGGTCATG 59.148 52.381 21.06 9.73 0.00 3.07
195 196 1.475280 ACTATGTGCACGTACGGTCAT 59.525 47.619 21.06 17.97 0.00 3.06
196 197 0.883153 ACTATGTGCACGTACGGTCA 59.117 50.000 21.06 13.58 0.00 4.02
197 198 1.986698 AACTATGTGCACGTACGGTC 58.013 50.000 21.06 10.98 0.00 4.79
198 199 2.443887 AAACTATGTGCACGTACGGT 57.556 45.000 21.06 9.64 0.00 4.83
199 200 3.922240 ACTAAAACTATGTGCACGTACGG 59.078 43.478 21.06 9.00 0.00 4.02
200 201 5.505165 AACTAAAACTATGTGCACGTACG 57.495 39.130 14.85 15.01 0.00 3.67
232 233 9.751542 ACGGTTACATTTTGAACATATTTTCAA 57.248 25.926 12.03 12.03 42.47 2.69
233 234 9.751542 AACGGTTACATTTTGAACATATTTTCA 57.248 25.926 0.03 0.03 33.55 2.69
237 238 8.907685 CGAAAACGGTTACATTTTGAACATATT 58.092 29.630 0.00 0.00 0.00 1.28
238 239 8.077386 ACGAAAACGGTTACATTTTGAACATAT 58.923 29.630 0.00 0.00 0.00 1.78
239 240 7.416022 ACGAAAACGGTTACATTTTGAACATA 58.584 30.769 0.00 0.00 0.00 2.29
240 241 6.267070 ACGAAAACGGTTACATTTTGAACAT 58.733 32.000 0.00 0.00 0.00 2.71
241 242 5.638783 ACGAAAACGGTTACATTTTGAACA 58.361 33.333 0.00 0.00 0.00 3.18
242 243 5.171874 GGACGAAAACGGTTACATTTTGAAC 59.828 40.000 0.00 0.00 0.00 3.18
243 244 5.272397 GGACGAAAACGGTTACATTTTGAA 58.728 37.500 0.00 0.00 0.00 2.69
244 245 4.552378 CGGACGAAAACGGTTACATTTTGA 60.552 41.667 0.00 0.00 0.00 2.69
245 246 3.660356 CGGACGAAAACGGTTACATTTTG 59.340 43.478 0.00 0.00 0.00 2.44
246 247 3.303924 CCGGACGAAAACGGTTACATTTT 60.304 43.478 0.00 0.00 44.85 1.82
247 248 2.223845 CCGGACGAAAACGGTTACATTT 59.776 45.455 0.00 0.00 44.85 2.32
248 249 1.799994 CCGGACGAAAACGGTTACATT 59.200 47.619 0.00 0.00 44.85 2.71
249 250 1.431496 CCGGACGAAAACGGTTACAT 58.569 50.000 0.00 0.00 44.85 2.29
250 251 2.897780 CCGGACGAAAACGGTTACA 58.102 52.632 0.00 0.00 44.85 2.41
256 257 5.453281 TTCATATAAACCGGACGAAAACG 57.547 39.130 9.46 0.00 0.00 3.60
257 258 6.908820 GGATTTCATATAAACCGGACGAAAAC 59.091 38.462 9.46 4.82 0.00 2.43
258 259 6.238157 CGGATTTCATATAAACCGGACGAAAA 60.238 38.462 9.46 0.00 37.28 2.29
259 260 5.234757 CGGATTTCATATAAACCGGACGAAA 59.765 40.000 9.46 6.30 37.28 3.46
260 261 4.746115 CGGATTTCATATAAACCGGACGAA 59.254 41.667 9.46 0.00 37.28 3.85
261 262 4.202141 ACGGATTTCATATAAACCGGACGA 60.202 41.667 9.46 0.00 43.76 4.20
262 263 4.053295 ACGGATTTCATATAAACCGGACG 58.947 43.478 9.46 0.00 43.76 4.79
263 264 5.051816 TGACGGATTTCATATAAACCGGAC 58.948 41.667 9.46 5.96 43.76 4.79
264 265 5.279255 TGACGGATTTCATATAAACCGGA 57.721 39.130 9.46 0.00 43.76 5.14
265 266 5.468746 ACATGACGGATTTCATATAAACCGG 59.531 40.000 0.00 0.00 43.76 5.28
266 267 6.539649 ACATGACGGATTTCATATAAACCG 57.460 37.500 0.00 0.00 44.77 4.44
280 281 9.268268 GGTTAGATTTCATATAAACATGACGGA 57.732 33.333 0.00 0.00 34.69 4.69
281 282 9.273016 AGGTTAGATTTCATATAAACATGACGG 57.727 33.333 0.00 0.00 34.69 4.79
292 293 8.970020 TCATGCAAACAAGGTTAGATTTCATAT 58.030 29.630 0.00 0.00 0.00 1.78
293 294 8.347004 TCATGCAAACAAGGTTAGATTTCATA 57.653 30.769 0.00 0.00 0.00 2.15
294 295 7.230849 TCATGCAAACAAGGTTAGATTTCAT 57.769 32.000 0.00 0.00 0.00 2.57
295 296 6.647334 TCATGCAAACAAGGTTAGATTTCA 57.353 33.333 0.00 0.00 0.00 2.69
296 297 8.538409 AATTCATGCAAACAAGGTTAGATTTC 57.462 30.769 0.00 0.00 0.00 2.17
297 298 7.603784 GGAATTCATGCAAACAAGGTTAGATTT 59.396 33.333 7.93 0.00 0.00 2.17
298 299 7.099120 GGAATTCATGCAAACAAGGTTAGATT 58.901 34.615 7.93 0.00 0.00 2.40
299 300 6.211184 TGGAATTCATGCAAACAAGGTTAGAT 59.789 34.615 7.93 0.00 0.00 1.98
300 301 5.538053 TGGAATTCATGCAAACAAGGTTAGA 59.462 36.000 7.93 0.00 0.00 2.10
301 302 5.782047 TGGAATTCATGCAAACAAGGTTAG 58.218 37.500 7.93 0.00 0.00 2.34
302 303 5.798125 TGGAATTCATGCAAACAAGGTTA 57.202 34.783 7.93 0.00 0.00 2.85
303 304 4.686191 TGGAATTCATGCAAACAAGGTT 57.314 36.364 7.93 0.00 0.00 3.50
304 305 4.895668 ATGGAATTCATGCAAACAAGGT 57.104 36.364 7.93 0.00 34.22 3.50
318 319 8.267183 ACTCTTTTTCAACAAAGGAATGGAATT 58.733 29.630 0.00 0.00 34.09 2.17
319 320 7.795047 ACTCTTTTTCAACAAAGGAATGGAAT 58.205 30.769 0.00 0.00 34.90 3.01
320 321 7.181569 ACTCTTTTTCAACAAAGGAATGGAA 57.818 32.000 0.00 0.00 34.90 3.53
321 322 6.790232 ACTCTTTTTCAACAAAGGAATGGA 57.210 33.333 0.00 0.00 34.90 3.41
322 323 7.548780 TCAAACTCTTTTTCAACAAAGGAATGG 59.451 33.333 0.00 0.00 34.90 3.16
323 324 8.477984 TCAAACTCTTTTTCAACAAAGGAATG 57.522 30.769 0.00 0.00 34.90 2.67
324 325 9.500785 TTTCAAACTCTTTTTCAACAAAGGAAT 57.499 25.926 0.00 0.00 34.90 3.01
325 326 8.894768 TTTCAAACTCTTTTTCAACAAAGGAA 57.105 26.923 0.00 0.00 34.90 3.36
326 327 8.934825 CATTTCAAACTCTTTTTCAACAAAGGA 58.065 29.630 0.00 0.00 34.90 3.36
327 328 8.720562 ACATTTCAAACTCTTTTTCAACAAAGG 58.279 29.630 0.00 0.00 34.90 3.11
331 332 8.816144 GCATACATTTCAAACTCTTTTTCAACA 58.184 29.630 0.00 0.00 0.00 3.33
332 333 7.998212 CGCATACATTTCAAACTCTTTTTCAAC 59.002 33.333 0.00 0.00 0.00 3.18
333 334 7.168972 CCGCATACATTTCAAACTCTTTTTCAA 59.831 33.333 0.00 0.00 0.00 2.69
334 335 6.640499 CCGCATACATTTCAAACTCTTTTTCA 59.360 34.615 0.00 0.00 0.00 2.69
335 336 6.640907 ACCGCATACATTTCAAACTCTTTTTC 59.359 34.615 0.00 0.00 0.00 2.29
336 337 6.512297 ACCGCATACATTTCAAACTCTTTTT 58.488 32.000 0.00 0.00 0.00 1.94
337 338 6.084326 ACCGCATACATTTCAAACTCTTTT 57.916 33.333 0.00 0.00 0.00 2.27
338 339 5.240623 TGACCGCATACATTTCAAACTCTTT 59.759 36.000 0.00 0.00 0.00 2.52
339 340 4.759693 TGACCGCATACATTTCAAACTCTT 59.240 37.500 0.00 0.00 0.00 2.85
340 341 4.323417 TGACCGCATACATTTCAAACTCT 58.677 39.130 0.00 0.00 0.00 3.24
341 342 4.678509 TGACCGCATACATTTCAAACTC 57.321 40.909 0.00 0.00 0.00 3.01
342 343 4.142403 CCATGACCGCATACATTTCAAACT 60.142 41.667 0.00 0.00 32.27 2.66
343 344 4.104776 CCATGACCGCATACATTTCAAAC 58.895 43.478 0.00 0.00 32.27 2.93
344 345 3.761218 ACCATGACCGCATACATTTCAAA 59.239 39.130 0.00 0.00 32.27 2.69
345 346 3.351740 ACCATGACCGCATACATTTCAA 58.648 40.909 0.00 0.00 32.27 2.69
346 347 2.997980 ACCATGACCGCATACATTTCA 58.002 42.857 0.00 0.00 32.27 2.69
347 348 3.489059 CCAACCATGACCGCATACATTTC 60.489 47.826 0.00 0.00 32.27 2.17
348 349 2.426738 CCAACCATGACCGCATACATTT 59.573 45.455 0.00 0.00 32.27 2.32
349 350 2.023673 CCAACCATGACCGCATACATT 58.976 47.619 0.00 0.00 32.27 2.71
350 351 1.211703 TCCAACCATGACCGCATACAT 59.788 47.619 0.00 0.00 32.27 2.29
351 352 0.615850 TCCAACCATGACCGCATACA 59.384 50.000 0.00 0.00 32.27 2.29
352 353 1.603802 CATCCAACCATGACCGCATAC 59.396 52.381 0.00 0.00 32.27 2.39
353 354 1.476652 CCATCCAACCATGACCGCATA 60.477 52.381 0.00 0.00 32.27 3.14
354 355 0.752743 CCATCCAACCATGACCGCAT 60.753 55.000 0.00 0.00 34.29 4.73
355 356 1.378382 CCATCCAACCATGACCGCA 60.378 57.895 0.00 0.00 0.00 5.69
356 357 2.774799 GCCATCCAACCATGACCGC 61.775 63.158 0.00 0.00 0.00 5.68
357 358 2.472059 CGCCATCCAACCATGACCG 61.472 63.158 0.00 0.00 0.00 4.79
358 359 1.378514 ACGCCATCCAACCATGACC 60.379 57.895 0.00 0.00 0.00 4.02
359 360 0.960364 ACACGCCATCCAACCATGAC 60.960 55.000 0.00 0.00 0.00 3.06
360 361 0.676466 GACACGCCATCCAACCATGA 60.676 55.000 0.00 0.00 0.00 3.07
361 362 1.656818 GGACACGCCATCCAACCATG 61.657 60.000 0.00 0.00 36.15 3.66
362 363 1.378514 GGACACGCCATCCAACCAT 60.379 57.895 0.00 0.00 36.15 3.55
363 364 2.033448 GGACACGCCATCCAACCA 59.967 61.111 0.00 0.00 36.15 3.67
364 365 3.124921 CGGACACGCCATCCAACC 61.125 66.667 1.60 0.00 35.83 3.77
377 378 4.222847 GGGGATCAGTCCGCGGAC 62.223 72.222 43.92 43.92 46.01 4.79
383 384 1.153628 CGAACACGGGGATCAGTCC 60.154 63.158 0.00 0.00 44.29 3.85
384 385 0.736325 CACGAACACGGGGATCAGTC 60.736 60.000 0.00 0.00 0.00 3.51
385 386 1.292223 CACGAACACGGGGATCAGT 59.708 57.895 0.00 0.00 0.00 3.41
386 387 4.185413 CACGAACACGGGGATCAG 57.815 61.111 0.00 0.00 0.00 2.90
394 395 2.430244 CCTCCGTCCACGAACACG 60.430 66.667 0.00 0.00 43.02 4.49
395 396 2.737376 GCCTCCGTCCACGAACAC 60.737 66.667 0.00 0.00 43.02 3.32
396 397 4.351938 CGCCTCCGTCCACGAACA 62.352 66.667 0.00 0.00 43.02 3.18
402 403 4.689549 TTCTCCCGCCTCCGTCCA 62.690 66.667 0.00 0.00 0.00 4.02
403 404 2.253403 ATTTTCTCCCGCCTCCGTCC 62.253 60.000 0.00 0.00 0.00 4.79
404 405 0.392595 AATTTTCTCCCGCCTCCGTC 60.393 55.000 0.00 0.00 0.00 4.79
405 406 0.037734 AAATTTTCTCCCGCCTCCGT 59.962 50.000 0.00 0.00 0.00 4.69
406 407 0.451783 CAAATTTTCTCCCGCCTCCG 59.548 55.000 0.00 0.00 0.00 4.63
407 408 1.202348 CACAAATTTTCTCCCGCCTCC 59.798 52.381 0.00 0.00 0.00 4.30
408 409 1.202348 CCACAAATTTTCTCCCGCCTC 59.798 52.381 0.00 0.00 0.00 4.70
409 410 1.256812 CCACAAATTTTCTCCCGCCT 58.743 50.000 0.00 0.00 0.00 5.52
410 411 0.246360 CCCACAAATTTTCTCCCGCC 59.754 55.000 0.00 0.00 0.00 6.13
411 412 0.966179 ACCCACAAATTTTCTCCCGC 59.034 50.000 0.00 0.00 0.00 6.13
412 413 2.288763 CCAACCCACAAATTTTCTCCCG 60.289 50.000 0.00 0.00 0.00 5.14
413 414 2.703536 ACCAACCCACAAATTTTCTCCC 59.296 45.455 0.00 0.00 0.00 4.30
414 415 4.415881 AACCAACCCACAAATTTTCTCC 57.584 40.909 0.00 0.00 0.00 3.71
415 416 6.213677 GTCTAACCAACCCACAAATTTTCTC 58.786 40.000 0.00 0.00 0.00 2.87
416 417 5.069914 GGTCTAACCAACCCACAAATTTTCT 59.930 40.000 0.00 0.00 38.42 2.52
417 418 5.069914 AGGTCTAACCAACCCACAAATTTTC 59.930 40.000 0.00 0.00 41.95 2.29
418 419 4.966168 AGGTCTAACCAACCCACAAATTTT 59.034 37.500 0.00 0.00 41.95 1.82
419 420 4.343814 CAGGTCTAACCAACCCACAAATTT 59.656 41.667 0.00 0.00 41.95 1.82
420 421 3.895041 CAGGTCTAACCAACCCACAAATT 59.105 43.478 0.00 0.00 41.95 1.82
421 422 3.496331 CAGGTCTAACCAACCCACAAAT 58.504 45.455 0.00 0.00 41.95 2.32
422 423 2.938838 CAGGTCTAACCAACCCACAAA 58.061 47.619 0.00 0.00 41.95 2.83
423 424 1.477923 GCAGGTCTAACCAACCCACAA 60.478 52.381 0.00 0.00 41.95 3.33
424 425 0.109723 GCAGGTCTAACCAACCCACA 59.890 55.000 0.00 0.00 41.95 4.17
425 426 0.608308 GGCAGGTCTAACCAACCCAC 60.608 60.000 0.00 0.00 41.95 4.61
426 427 0.770557 AGGCAGGTCTAACCAACCCA 60.771 55.000 0.00 0.00 41.95 4.51
427 428 0.404426 AAGGCAGGTCTAACCAACCC 59.596 55.000 0.00 0.00 41.95 4.11
428 429 3.646736 ATAAGGCAGGTCTAACCAACC 57.353 47.619 0.00 0.00 41.95 3.77
429 430 5.932883 GCTATATAAGGCAGGTCTAACCAAC 59.067 44.000 0.00 0.00 41.95 3.77
430 431 5.844516 AGCTATATAAGGCAGGTCTAACCAA 59.155 40.000 0.00 0.00 41.95 3.67
431 432 5.246203 CAGCTATATAAGGCAGGTCTAACCA 59.754 44.000 0.00 0.00 41.95 3.67
432 433 5.337652 CCAGCTATATAAGGCAGGTCTAACC 60.338 48.000 0.00 0.00 38.99 2.85
433 434 5.725362 CCAGCTATATAAGGCAGGTCTAAC 58.275 45.833 0.00 0.00 31.76 2.34
434 435 4.223032 GCCAGCTATATAAGGCAGGTCTAA 59.777 45.833 13.03 0.00 46.26 2.10
435 436 3.769844 GCCAGCTATATAAGGCAGGTCTA 59.230 47.826 13.03 0.00 46.26 2.59
436 437 2.569404 GCCAGCTATATAAGGCAGGTCT 59.431 50.000 13.03 0.00 46.26 3.85
437 438 2.979240 GCCAGCTATATAAGGCAGGTC 58.021 52.381 13.03 1.88 46.26 3.85
442 443 3.445096 CCATTTGGCCAGCTATATAAGGC 59.555 47.826 5.11 10.56 46.28 4.35
443 444 4.019174 CCCATTTGGCCAGCTATATAAGG 58.981 47.826 5.11 0.00 0.00 2.69
508 509 4.329545 TCGTGCCTGGCCCAAGTC 62.330 66.667 17.53 0.00 0.00 3.01
509 510 4.643387 GTCGTGCCTGGCCCAAGT 62.643 66.667 17.53 0.00 0.00 3.16
510 511 4.641645 TGTCGTGCCTGGCCCAAG 62.642 66.667 17.53 4.85 0.00 3.61
511 512 4.947147 GTGTCGTGCCTGGCCCAA 62.947 66.667 17.53 0.00 0.00 4.12
517 518 3.583276 TTAGCCCGTGTCGTGCCTG 62.583 63.158 0.00 0.00 29.06 4.85
518 519 2.874664 TTTAGCCCGTGTCGTGCCT 61.875 57.895 0.00 0.00 29.06 4.75
519 520 2.357760 TTTAGCCCGTGTCGTGCC 60.358 61.111 0.00 0.00 29.06 5.01
520 521 2.858158 GTTTAGCCCGTGTCGTGC 59.142 61.111 0.00 0.00 0.00 5.34
521 522 2.377310 CCGTTTAGCCCGTGTCGTG 61.377 63.158 0.00 0.00 0.00 4.35
522 523 2.048877 CCGTTTAGCCCGTGTCGT 60.049 61.111 0.00 0.00 0.00 4.34
523 524 2.812178 CCCGTTTAGCCCGTGTCG 60.812 66.667 0.00 0.00 0.00 4.35
524 525 1.739196 GACCCGTTTAGCCCGTGTC 60.739 63.158 0.00 0.00 0.00 3.67
525 526 2.344872 GACCCGTTTAGCCCGTGT 59.655 61.111 0.00 0.00 0.00 4.49
526 527 2.812178 CGACCCGTTTAGCCCGTG 60.812 66.667 0.00 0.00 0.00 4.94
527 528 4.073200 CCGACCCGTTTAGCCCGT 62.073 66.667 0.00 0.00 0.00 5.28
528 529 4.825252 CCCGACCCGTTTAGCCCG 62.825 72.222 0.00 0.00 0.00 6.13
580 581 3.922640 GCGAGCCTAGCCTCCAGG 61.923 72.222 0.00 0.00 36.16 4.45
581 582 4.277593 CGCGAGCCTAGCCTCCAG 62.278 72.222 0.00 0.00 0.00 3.86
609 610 0.524414 AAAACTTAATCGGGCCGTGC 59.476 50.000 27.32 0.00 0.00 5.34
610 611 2.081462 AGAAAACTTAATCGGGCCGTG 58.919 47.619 27.32 13.94 0.00 4.94
611 612 2.484742 AGAAAACTTAATCGGGCCGT 57.515 45.000 27.32 10.46 0.00 5.68
612 613 3.842732 AAAGAAAACTTAATCGGGCCG 57.157 42.857 22.51 22.51 0.00 6.13
613 614 8.542497 AAAAATAAAGAAAACTTAATCGGGCC 57.458 30.769 0.00 0.00 0.00 5.80
650 651 9.196139 GCCTATTTTTATATGTTGGGCCATATA 57.804 33.333 7.26 10.29 38.60 0.86
651 652 7.900784 AGCCTATTTTTATATGTTGGGCCATAT 59.099 33.333 7.26 8.12 40.32 1.78
652 653 7.245292 AGCCTATTTTTATATGTTGGGCCATA 58.755 34.615 7.26 0.00 37.98 2.74
653 654 6.084060 AGCCTATTTTTATATGTTGGGCCAT 58.916 36.000 7.26 0.00 37.98 4.40
654 655 5.463154 AGCCTATTTTTATATGTTGGGCCA 58.537 37.500 0.00 0.00 37.98 5.36
655 656 7.533289 TTAGCCTATTTTTATATGTTGGGCC 57.467 36.000 0.00 0.00 37.98 5.80
656 657 9.825109 TTTTTAGCCTATTTTTATATGTTGGGC 57.175 29.630 0.00 0.00 37.57 5.36
661 662 9.946165 GAGCGTTTTTAGCCTATTTTTATATGT 57.054 29.630 0.00 0.00 34.64 2.29
662 663 9.944663 TGAGCGTTTTTAGCCTATTTTTATATG 57.055 29.630 0.00 0.00 34.64 1.78
664 665 9.169592 ACTGAGCGTTTTTAGCCTATTTTTATA 57.830 29.630 0.00 0.00 34.64 0.98
665 666 7.968405 CACTGAGCGTTTTTAGCCTATTTTTAT 59.032 33.333 0.00 0.00 34.64 1.40
666 667 7.302524 CACTGAGCGTTTTTAGCCTATTTTTA 58.697 34.615 0.00 0.00 34.64 1.52
667 668 6.149633 CACTGAGCGTTTTTAGCCTATTTTT 58.850 36.000 0.00 0.00 34.64 1.94
668 669 5.699839 CACTGAGCGTTTTTAGCCTATTTT 58.300 37.500 0.00 0.00 34.64 1.82
669 670 4.379499 GCACTGAGCGTTTTTAGCCTATTT 60.379 41.667 0.00 0.00 34.64 1.40
670 671 3.127030 GCACTGAGCGTTTTTAGCCTATT 59.873 43.478 0.00 0.00 34.64 1.73
671 672 2.678336 GCACTGAGCGTTTTTAGCCTAT 59.322 45.455 0.00 0.00 34.64 2.57
672 673 2.073816 GCACTGAGCGTTTTTAGCCTA 58.926 47.619 0.00 0.00 34.64 3.93
673 674 0.875059 GCACTGAGCGTTTTTAGCCT 59.125 50.000 0.00 0.00 34.64 4.58
674 675 3.384702 GCACTGAGCGTTTTTAGCC 57.615 52.632 0.00 0.00 34.64 3.93
684 685 2.872245 TCTATTATTTGCCGCACTGAGC 59.128 45.455 0.00 0.00 40.87 4.26
685 686 4.025396 CAGTCTATTATTTGCCGCACTGAG 60.025 45.833 0.00 0.00 33.30 3.35
686 687 3.871006 CAGTCTATTATTTGCCGCACTGA 59.129 43.478 0.00 0.00 33.30 3.41
687 688 3.871006 TCAGTCTATTATTTGCCGCACTG 59.129 43.478 0.00 0.00 32.87 3.66
688 689 4.137116 TCAGTCTATTATTTGCCGCACT 57.863 40.909 0.00 0.00 0.00 4.40
689 690 4.875544 TTCAGTCTATTATTTGCCGCAC 57.124 40.909 0.00 0.00 0.00 5.34
690 691 5.888691 TTTTCAGTCTATTATTTGCCGCA 57.111 34.783 0.00 0.00 0.00 5.69
691 692 7.061094 GCATATTTTCAGTCTATTATTTGCCGC 59.939 37.037 0.00 0.00 0.00 6.53
692 693 7.269084 CGCATATTTTCAGTCTATTATTTGCCG 59.731 37.037 0.00 0.00 0.00 5.69
693 694 7.538678 CCGCATATTTTCAGTCTATTATTTGCC 59.461 37.037 0.00 0.00 0.00 4.52
694 695 7.061094 GCCGCATATTTTCAGTCTATTATTTGC 59.939 37.037 0.00 0.00 0.00 3.68
695 696 7.538678 GGCCGCATATTTTCAGTCTATTATTTG 59.461 37.037 0.00 0.00 0.00 2.32
696 697 7.309194 GGGCCGCATATTTTCAGTCTATTATTT 60.309 37.037 0.00 0.00 0.00 1.40
697 698 6.151144 GGGCCGCATATTTTCAGTCTATTATT 59.849 38.462 0.00 0.00 0.00 1.40
698 699 5.648092 GGGCCGCATATTTTCAGTCTATTAT 59.352 40.000 0.00 0.00 0.00 1.28
699 700 5.001232 GGGCCGCATATTTTCAGTCTATTA 58.999 41.667 0.00 0.00 0.00 0.98
700 701 3.821033 GGGCCGCATATTTTCAGTCTATT 59.179 43.478 0.00 0.00 0.00 1.73
701 702 3.181445 TGGGCCGCATATTTTCAGTCTAT 60.181 43.478 0.00 0.00 0.00 1.98
702 703 2.171659 TGGGCCGCATATTTTCAGTCTA 59.828 45.455 0.00 0.00 0.00 2.59
703 704 1.064758 TGGGCCGCATATTTTCAGTCT 60.065 47.619 0.00 0.00 0.00 3.24
704 705 1.065551 GTGGGCCGCATATTTTCAGTC 59.934 52.381 13.30 0.00 0.00 3.51
705 706 1.102978 GTGGGCCGCATATTTTCAGT 58.897 50.000 13.30 0.00 0.00 3.41
706 707 0.385390 GGTGGGCCGCATATTTTCAG 59.615 55.000 20.39 0.00 0.00 3.02
707 708 2.499214 GGTGGGCCGCATATTTTCA 58.501 52.632 20.39 0.00 0.00 2.69
718 719 3.428282 CGTTTAGCACGGTGGGCC 61.428 66.667 10.60 0.00 45.89 5.80
726 727 2.255881 ACGTTGGCCCGTTTAGCAC 61.256 57.895 0.00 0.00 37.96 4.40
727 728 2.111460 ACGTTGGCCCGTTTAGCA 59.889 55.556 0.00 0.00 37.96 3.49
728 729 2.559330 CACGTTGGCCCGTTTAGC 59.441 61.111 4.13 0.00 39.45 3.09
729 730 2.559330 GCACGTTGGCCCGTTTAG 59.441 61.111 4.13 0.00 39.45 1.85
738 739 1.247419 TAAATGGGCTGGCACGTTGG 61.247 55.000 2.89 0.00 0.00 3.77
739 740 0.109319 GTAAATGGGCTGGCACGTTG 60.109 55.000 2.89 0.00 0.00 4.10
740 741 0.251165 AGTAAATGGGCTGGCACGTT 60.251 50.000 2.88 0.00 0.00 3.99
741 742 0.616371 TAGTAAATGGGCTGGCACGT 59.384 50.000 2.88 0.00 0.00 4.49
742 743 1.745232 TTAGTAAATGGGCTGGCACG 58.255 50.000 2.88 0.00 0.00 5.34
743 744 3.181476 CCAATTAGTAAATGGGCTGGCAC 60.181 47.826 8.90 0.00 29.13 5.01
744 745 3.030291 CCAATTAGTAAATGGGCTGGCA 58.970 45.455 8.90 0.00 29.13 4.92
745 746 2.365293 CCCAATTAGTAAATGGGCTGGC 59.635 50.000 20.76 0.00 35.09 4.85
746 747 3.642141 ACCCAATTAGTAAATGGGCTGG 58.358 45.455 29.00 11.39 35.09 4.85
747 748 4.466015 ACAACCCAATTAGTAAATGGGCTG 59.534 41.667 29.00 28.13 35.09 4.85
748 749 4.466015 CACAACCCAATTAGTAAATGGGCT 59.534 41.667 29.00 18.55 35.09 5.19
749 750 4.754322 CACAACCCAATTAGTAAATGGGC 58.246 43.478 29.00 0.00 35.09 5.36
750 751 4.382577 GGCACAACCCAATTAGTAAATGGG 60.383 45.833 27.90 27.90 38.44 4.00
751 752 4.754322 GGCACAACCCAATTAGTAAATGG 58.246 43.478 9.71 9.71 0.00 3.16
799 800 1.108727 TACTATACGGGCCGTGTGGG 61.109 60.000 39.80 29.10 41.39 4.61
800 801 0.746063 TTACTATACGGGCCGTGTGG 59.254 55.000 39.80 35.36 41.39 4.17
801 802 2.669364 GATTACTATACGGGCCGTGTG 58.331 52.381 39.80 28.72 41.39 3.82
802 803 1.267806 CGATTACTATACGGGCCGTGT 59.732 52.381 39.80 35.09 41.39 4.49
803 804 1.267806 ACGATTACTATACGGGCCGTG 59.732 52.381 39.80 26.05 41.39 4.94
804 805 1.267806 CACGATTACTATACGGGCCGT 59.732 52.381 35.91 35.91 44.35 5.68
805 806 1.973138 CACGATTACTATACGGGCCG 58.027 55.000 27.06 27.06 0.00 6.13
808 809 1.891150 AGGGCACGATTACTATACGGG 59.109 52.381 0.00 0.00 0.00 5.28
809 810 2.352421 CCAGGGCACGATTACTATACGG 60.352 54.545 0.00 0.00 0.00 4.02
810 811 2.925306 GCCAGGGCACGATTACTATACG 60.925 54.545 5.20 0.00 41.49 3.06
811 812 2.685100 GCCAGGGCACGATTACTATAC 58.315 52.381 5.20 0.00 41.49 1.47
812 813 1.271379 CGCCAGGGCACGATTACTATA 59.729 52.381 11.42 0.00 42.06 1.31
813 814 0.033504 CGCCAGGGCACGATTACTAT 59.966 55.000 11.42 0.00 42.06 2.12
814 815 1.440060 CGCCAGGGCACGATTACTA 59.560 57.895 11.42 0.00 42.06 1.82
815 816 2.186903 CGCCAGGGCACGATTACT 59.813 61.111 11.42 0.00 42.06 2.24
816 817 2.895372 CCGCCAGGGCACGATTAC 60.895 66.667 11.42 0.00 42.06 1.89
840 841 4.169696 TAATCGTGCCTGGCCCGG 62.170 66.667 22.84 9.24 0.00 5.73
841 842 2.895372 GTAATCGTGCCTGGCCCG 60.895 66.667 17.67 17.67 0.00 6.13
842 843 0.751643 ATTGTAATCGTGCCTGGCCC 60.752 55.000 17.53 2.94 0.00 5.80
843 844 0.381801 CATTGTAATCGTGCCTGGCC 59.618 55.000 17.53 6.66 0.00 5.36
844 845 0.381801 CCATTGTAATCGTGCCTGGC 59.618 55.000 12.87 12.87 0.00 4.85
845 846 1.024271 CCCATTGTAATCGTGCCTGG 58.976 55.000 0.00 0.00 0.00 4.45
846 847 0.381801 GCCCATTGTAATCGTGCCTG 59.618 55.000 0.00 0.00 0.00 4.85
847 848 0.751643 GGCCCATTGTAATCGTGCCT 60.752 55.000 0.00 0.00 34.61 4.75
848 849 1.733526 GGCCCATTGTAATCGTGCC 59.266 57.895 0.00 0.00 0.00 5.01
849 850 1.355210 CGGCCCATTGTAATCGTGC 59.645 57.895 0.00 0.00 0.00 5.34
850 851 1.444119 CCCGGCCCATTGTAATCGTG 61.444 60.000 0.00 0.00 0.00 4.35
851 852 1.153046 CCCGGCCCATTGTAATCGT 60.153 57.895 0.00 0.00 0.00 3.73
852 853 2.551912 GCCCGGCCCATTGTAATCG 61.552 63.158 0.00 0.00 0.00 3.34
853 854 2.200337 GGCCCGGCCCATTGTAATC 61.200 63.158 18.83 0.00 44.06 1.75
854 855 2.123468 GGCCCGGCCCATTGTAAT 60.123 61.111 18.83 0.00 44.06 1.89
880 881 1.378514 AGCATACCTGGCCAAACGG 60.379 57.895 7.01 7.56 0.00 4.44
881 882 1.802636 CAGCATACCTGGCCAAACG 59.197 57.895 7.01 0.00 37.93 3.60
882 883 1.512694 GCAGCATACCTGGCCAAAC 59.487 57.895 7.01 0.00 42.03 2.93
883 884 4.016838 GCAGCATACCTGGCCAAA 57.983 55.556 7.01 0.00 42.03 3.28
888 889 2.684881 CAAACTAAGGCAGCATACCTGG 59.315 50.000 0.00 0.00 42.03 4.45
889 890 2.098117 GCAAACTAAGGCAGCATACCTG 59.902 50.000 0.00 0.00 44.67 4.00
890 891 2.369394 GCAAACTAAGGCAGCATACCT 58.631 47.619 0.00 0.00 40.02 3.08
891 892 1.405463 GGCAAACTAAGGCAGCATACC 59.595 52.381 0.00 0.00 0.00 2.73
892 893 1.405463 GGGCAAACTAAGGCAGCATAC 59.595 52.381 0.00 0.00 0.00 2.39
893 894 1.684869 GGGGCAAACTAAGGCAGCATA 60.685 52.381 0.00 0.00 0.00 3.14
894 895 0.972471 GGGGCAAACTAAGGCAGCAT 60.972 55.000 0.00 0.00 0.00 3.79
895 896 1.606313 GGGGCAAACTAAGGCAGCA 60.606 57.895 0.00 0.00 0.00 4.41
896 897 2.351244 GGGGGCAAACTAAGGCAGC 61.351 63.158 0.00 0.00 0.00 5.25
897 898 0.541764 TTGGGGGCAAACTAAGGCAG 60.542 55.000 0.00 0.00 0.00 4.85
898 899 0.105453 TTTGGGGGCAAACTAAGGCA 60.105 50.000 0.00 0.00 0.00 4.75
899 900 1.052617 TTTTGGGGGCAAACTAAGGC 58.947 50.000 0.00 0.00 0.00 4.35
921 922 0.107557 AGTCCAAAACGAACCACCGT 60.108 50.000 0.00 0.00 45.64 4.83
970 971 3.998672 CGGCGGGTACACTGTGGT 61.999 66.667 13.09 0.64 0.00 4.16
1067 1088 3.000819 AGGGGAACGCATCGGTGA 61.001 61.111 0.00 0.00 46.88 4.02
1069 1090 3.782443 GGAGGGGAACGCATCGGT 61.782 66.667 0.00 0.00 46.88 4.69
1088 1109 4.154347 GAGCGAGGAGGTGGGCTG 62.154 72.222 0.00 0.00 35.54 4.85
1090 1111 4.154347 CAGAGCGAGGAGGTGGGC 62.154 72.222 0.00 0.00 0.00 5.36
1236 1257 0.753479 GGAGGATCTGCACGAGGAGA 60.753 60.000 6.52 6.52 46.70 3.71
1335 1356 4.764336 TCGTAGGCGTCGGCGTTG 62.764 66.667 12.58 6.99 41.24 4.10
1542 1563 2.610859 AACTCCTGGGCATCGGGT 60.611 61.111 0.00 0.00 42.62 5.28
1633 1654 9.107177 ACTATCTGCAATCAATCAAACTAAGAG 57.893 33.333 0.00 0.00 0.00 2.85
1638 1659 8.565896 TTACACTATCTGCAATCAATCAAACT 57.434 30.769 0.00 0.00 0.00 2.66
1639 1660 7.912250 CCTTACACTATCTGCAATCAATCAAAC 59.088 37.037 0.00 0.00 0.00 2.93
1653 1674 7.363094 GCAGTGTTAAGAGACCTTACACTATCT 60.363 40.741 0.00 0.00 40.72 1.98
1687 1759 6.947464 ACTACAACAGGCATAGTACAGAAAT 58.053 36.000 0.00 0.00 0.00 2.17
1754 1834 4.260538 GCAACAAAACAATGAAAATCGCCA 60.261 37.500 0.00 0.00 0.00 5.69
1769 1849 6.183360 GCTCACAATTGTAACTTGCAACAAAA 60.183 34.615 11.53 0.00 38.95 2.44
1887 1967 1.270550 CCAAGAGTTTCATGGTGCACC 59.729 52.381 29.67 29.67 31.05 5.01
1928 2008 1.846007 ACCAAACTGCAGACCACAAA 58.154 45.000 23.35 0.00 0.00 2.83
1967 2047 4.988540 TGAAACGTCTCATCAAACTACAGG 59.011 41.667 0.00 0.00 0.00 4.00
1968 2048 6.712241 ATGAAACGTCTCATCAAACTACAG 57.288 37.500 0.00 0.00 29.80 2.74
2022 2102 7.235935 AGAGGAAAATTTGCAGATTGAATCA 57.764 32.000 8.03 0.00 0.00 2.57
2059 2139 7.011950 TGACCGACCAATTTCATACACAATATC 59.988 37.037 0.00 0.00 0.00 1.63
2170 2250 4.802563 GGATGCCGTCTAGTACTTACAAAC 59.197 45.833 0.00 0.00 0.00 2.93
2186 2266 4.276678 ACAGAATCATTATTGTGGATGCCG 59.723 41.667 2.26 0.00 39.95 5.69
2188 2268 5.300034 TGGACAGAATCATTATTGTGGATGC 59.700 40.000 2.26 0.00 39.95 3.91
2206 2286 1.264288 GAAGCCGAACAAACTGGACAG 59.736 52.381 0.00 0.00 0.00 3.51
2210 2290 1.600413 GCAAGAAGCCGAACAAACTGG 60.600 52.381 0.00 0.00 37.23 4.00
2269 2349 8.116026 ACAGGGATACTAAAATTCAGGTTTCAT 58.884 33.333 0.00 0.00 0.00 2.57
2314 2394 8.641541 AGAAAATGAACTGTGATATTGTGGTTT 58.358 29.630 0.00 0.00 0.00 3.27
2645 2727 9.903682 CCAAGCATTAAAAACATATCTAGATGG 57.096 33.333 15.79 9.76 0.00 3.51
2723 2806 6.096705 AGTTCAACATTCACAGGAAAACATCA 59.903 34.615 0.00 0.00 36.43 3.07
2786 2869 1.168714 GACATGAGGGCAAACCACTC 58.831 55.000 0.00 0.00 43.89 3.51
2840 2923 7.622893 AGAAATCCAAAATGCTTCTCTACTC 57.377 36.000 0.00 0.00 0.00 2.59
2890 2973 9.167311 CAGGCACTTAGTAAAGTTGATCTATTT 57.833 33.333 0.00 0.00 43.60 1.40
3147 3230 7.041098 CCAGTGGGCACATTAGAGAATTATTAC 60.041 40.741 0.00 0.00 0.00 1.89
3330 3413 2.628657 ACTATGTTCGGCTCTATCCCAC 59.371 50.000 0.00 0.00 0.00 4.61
3703 3786 6.460781 TCGGTACTCTTTGAAGAAGCAATTA 58.539 36.000 0.00 0.00 34.03 1.40
3849 3932 7.069331 TCCAAAGTTCCATAACAGTTTCATGTT 59.931 33.333 0.00 0.00 45.19 2.71
3919 4002 3.947910 AAACCATGAATCAGCAAGGTG 57.052 42.857 0.00 0.00 38.79 4.00
4223 4306 3.329889 TGCCCCGATCAAGCTGGT 61.330 61.111 0.00 0.00 0.00 4.00
4234 4317 1.086696 CATCTAACAACTGTGCCCCG 58.913 55.000 0.00 0.00 0.00 5.73
4247 4330 8.043113 GGAATGATAGTGCCATGATACATCTAA 58.957 37.037 0.00 0.00 0.00 2.10
4559 4643 5.052481 CGCCAATAATCTGATGTCTCTGAA 58.948 41.667 0.00 0.00 33.66 3.02
4618 4703 1.068055 CACCATCAAACAGCTGCCTTC 60.068 52.381 15.27 0.00 0.00 3.46
4625 4710 1.080298 GCCAGCACCATCAAACAGC 60.080 57.895 0.00 0.00 0.00 4.40
4749 4834 6.127338 TGCTATATCAGATACCCACAGCATAC 60.127 42.308 0.00 0.00 31.97 2.39
4860 4946 5.533528 AGTGTAATTGTTGGTCAAAGGTACC 59.466 40.000 2.73 2.73 39.62 3.34
4976 5125 6.536582 ACAGAAAATCCATGTCATTAGACTCG 59.463 38.462 0.00 0.00 45.20 4.18
5055 5204 8.915654 GCTTTTGACCAACAATTACTTTATGAG 58.084 33.333 0.00 0.00 38.36 2.90
5061 5382 5.128663 ACAGGCTTTTGACCAACAATTACTT 59.871 36.000 0.00 0.00 38.36 2.24
5110 5438 2.158871 AGAAAGTACACGGTGGCAAAGA 60.159 45.455 13.48 0.00 0.00 2.52
5135 5463 4.387026 AATATATGCAGCCCAAAGCCTA 57.613 40.909 0.00 0.00 45.47 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.