Multiple sequence alignment - TraesCS3A01G394400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G394400 chr3A 100.000 4100 0 0 1 4100 642035305 642031206 0.000000e+00 7572.0
1 TraesCS3A01G394400 chr3A 99.338 151 1 0 3477 3627 642031682 642031532 1.450000e-69 274.0
2 TraesCS3A01G394400 chr3A 99.338 151 1 0 3624 3774 642031829 642031679 1.450000e-69 274.0
3 TraesCS3A01G394400 chr3A 98.765 81 1 0 3424 3504 589538722 589538802 1.190000e-30 145.0
4 TraesCS3A01G394400 chr3A 100.000 51 0 0 3665 3715 642031591 642031541 1.210000e-15 95.3
5 TraesCS3A01G394400 chr3A 100.000 51 0 0 3518 3568 642031591 642031541 1.210000e-15 95.3
6 TraesCS3A01G394400 chr3A 100.000 51 0 0 3715 3765 642031641 642031591 1.210000e-15 95.3
7 TraesCS3A01G394400 chr3A 100.000 51 0 0 3568 3618 642031641 642031591 1.210000e-15 95.3
8 TraesCS3A01G394400 chr3A 100.000 51 0 0 3665 3715 642031738 642031688 1.210000e-15 95.3
9 TraesCS3A01G394400 chr3A 100.000 51 0 0 3518 3568 642031738 642031688 1.210000e-15 95.3
10 TraesCS3A01G394400 chr3A 100.000 51 0 0 3715 3765 642031788 642031738 1.210000e-15 95.3
11 TraesCS3A01G394400 chr3A 100.000 51 0 0 3568 3618 642031788 642031738 1.210000e-15 95.3
12 TraesCS3A01G394400 chr3A 94.118 34 2 0 3618 3651 589538769 589538802 7.000000e-03 52.8
13 TraesCS3A01G394400 chr3B 90.988 2419 157 25 896 3289 664890959 664888577 0.000000e+00 3203.0
14 TraesCS3A01G394400 chr3B 90.015 651 33 12 2 633 664892422 664891785 0.000000e+00 813.0
15 TraesCS3A01G394400 chr3B 88.645 273 23 6 3829 4098 664888255 664887988 3.950000e-85 326.0
16 TraesCS3A01G394400 chr3B 88.321 274 23 7 3829 4098 664887899 664887631 1.840000e-83 320.0
17 TraesCS3A01G394400 chr3B 83.410 217 22 6 3297 3504 664888526 664888315 5.410000e-44 189.0
18 TraesCS3A01G394400 chr3B 84.236 203 11 6 442 635 664891453 664891263 1.170000e-40 178.0
19 TraesCS3A01G394400 chr3B 94.118 34 2 0 3618 3651 587988370 587988403 7.000000e-03 52.8
20 TraesCS3A01G394400 chr3B 100.000 28 0 0 3624 3651 664888342 664888315 7.000000e-03 52.8
21 TraesCS3A01G394400 chr3D 91.700 1771 119 14 1538 3290 503737599 503735839 0.000000e+00 2431.0
22 TraesCS3A01G394400 chr3D 87.325 1499 88 40 2 1444 503739151 503737699 0.000000e+00 1622.0
23 TraesCS3A01G394400 chr3D 90.370 270 22 2 3829 4098 503731432 503731167 6.520000e-93 351.0
24 TraesCS3A01G394400 chr3D 93.651 189 8 2 3866 4054 503731682 503731498 3.120000e-71 279.0
25 TraesCS3A01G394400 chr3D 82.063 223 35 4 3292 3511 503731962 503731742 7.000000e-43 185.0
26 TraesCS3A01G394400 chr3D 97.647 85 0 2 3428 3511 448267706 448267789 1.190000e-30 145.0
27 TraesCS3A01G394400 chr3D 90.476 42 2 2 3618 3658 448267749 448267789 2.000000e-03 54.7
28 TraesCS3A01G394400 chr5D 96.629 89 2 1 3428 3516 246672163 246672076 3.300000e-31 147.0
29 TraesCS3A01G394400 chr1A 95.506 89 3 1 3424 3512 554300718 554300631 1.540000e-29 141.0
30 TraesCS3A01G394400 chr1A 95.455 88 3 1 3425 3511 554243898 554243985 5.530000e-29 139.0
31 TraesCS3A01G394400 chr7D 91.667 96 7 1 3429 3523 199564232 199564327 9.250000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G394400 chr3A 642031206 642035305 4099 True 807.490909 7572 99.879636 1 4100 11 chr3A.!!$R1 4099
1 TraesCS3A01G394400 chr3B 664887631 664892422 4791 True 725.971429 3203 89.373571 2 4098 7 chr3B.!!$R1 4096
2 TraesCS3A01G394400 chr3D 503731167 503739151 7984 True 973.600000 2431 89.021800 2 4098 5 chr3D.!!$R1 4096

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
865 1535 0.446222 CGTGGGATTCGCGTGAATTT 59.554 50.0 24.00 5.02 44.79 1.82 F
1033 1703 0.038310 CCCCCTTCCTTTCTCGCTTT 59.962 55.0 0.00 0.00 0.00 3.51 F
1670 2403 0.105039 GTATGGAGGAGGTTGAGCCG 59.895 60.0 0.00 0.00 43.70 5.52 F
2931 3676 0.321564 TGAGAATCAACCCAGCGGTG 60.322 55.0 7.86 7.86 45.97 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2536 3280 0.651031 GCGCCTTTTCGACTGGATAC 59.349 55.0 0.00 0.00 0.00 2.24 R
2886 3631 1.098129 GGAATTCCTGGCTCGCCTTC 61.098 60.0 17.73 4.12 36.94 3.46 R
3056 3801 0.034059 CAGGAACTCCAAGACGCACT 59.966 55.0 0.00 0.00 34.60 4.40 R
3771 8428 0.038526 GTGTGGAGTCTGTACGGTGG 60.039 60.0 0.64 0.00 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 5.193679 AGATTAAAACAGGAGAAATCGGGG 58.806 41.667 0.00 0.00 32.95 5.73
42 43 1.208165 AACAGGAGAAATCGGGGCCT 61.208 55.000 0.84 0.00 0.00 5.19
159 160 4.986708 CCCCCAACCCACAACCCG 62.987 72.222 0.00 0.00 0.00 5.28
176 177 2.688958 ACCCGTCCGAAAATGAAAACAA 59.311 40.909 0.00 0.00 0.00 2.83
177 178 3.047093 CCCGTCCGAAAATGAAAACAAC 58.953 45.455 0.00 0.00 0.00 3.32
186 187 5.443955 CGAAAATGAAAACAACACACGCTTT 60.444 36.000 0.00 0.00 0.00 3.51
187 188 4.838665 AATGAAAACAACACACGCTTTG 57.161 36.364 0.00 0.00 0.00 2.77
188 189 1.989165 TGAAAACAACACACGCTTTGC 59.011 42.857 0.00 0.00 0.00 3.68
236 240 2.603776 AGTTTCGACCTCGGGGCT 60.604 61.111 0.00 0.00 40.29 5.19
364 374 0.702706 GGGAGGATTTGGGGAGGGAT 60.703 60.000 0.00 0.00 0.00 3.85
454 472 0.599991 CCTCCTTTTGTTTTGCGCCC 60.600 55.000 4.18 0.00 0.00 6.13
469 487 3.465403 CCCCCGGTCTCTGCTCTG 61.465 72.222 0.00 0.00 0.00 3.35
470 488 4.154347 CCCCGGTCTCTGCTCTGC 62.154 72.222 0.00 0.00 0.00 4.26
471 489 3.073735 CCCGGTCTCTGCTCTGCT 61.074 66.667 0.00 0.00 0.00 4.24
472 490 2.493973 CCGGTCTCTGCTCTGCTC 59.506 66.667 0.00 0.00 0.00 4.26
598 1142 3.966026 GACGAACTGCCCGAGACCG 62.966 68.421 0.00 0.00 0.00 4.79
655 1199 1.154150 CGTCCACGGAAGTACGACC 60.154 63.158 0.00 2.06 46.00 4.79
656 1200 1.580845 CGTCCACGGAAGTACGACCT 61.581 60.000 9.08 0.00 46.00 3.85
670 1214 3.404224 ACGACCTCCTTTTCTTCTTCC 57.596 47.619 0.00 0.00 0.00 3.46
671 1215 2.038689 ACGACCTCCTTTTCTTCTTCCC 59.961 50.000 0.00 0.00 0.00 3.97
724 1276 1.004440 ACAGCCGCTTTCTCTGGAC 60.004 57.895 0.00 0.00 32.42 4.02
785 1368 3.839432 CTTCGTCTCCCTCGGCCC 61.839 72.222 0.00 0.00 0.00 5.80
802 1385 1.460255 CCTGCCACTTTCTCCCCAA 59.540 57.895 0.00 0.00 0.00 4.12
812 1395 3.118000 ACTTTCTCCCCAAAGTTTCGAGT 60.118 43.478 0.00 0.00 42.81 4.18
817 1400 4.530946 TCTCCCCAAAGTTTCGAGTAAGAT 59.469 41.667 0.00 0.00 0.00 2.40
818 1401 4.828829 TCCCCAAAGTTTCGAGTAAGATC 58.171 43.478 0.00 0.00 0.00 2.75
819 1402 3.939592 CCCCAAAGTTTCGAGTAAGATCC 59.060 47.826 0.00 0.00 0.00 3.36
820 1403 3.617263 CCCAAAGTTTCGAGTAAGATCCG 59.383 47.826 0.00 0.00 0.00 4.18
821 1404 3.617263 CCAAAGTTTCGAGTAAGATCCGG 59.383 47.826 0.00 0.00 0.00 5.14
822 1405 3.521947 AAGTTTCGAGTAAGATCCGGG 57.478 47.619 0.00 0.00 0.00 5.73
823 1406 1.136500 AGTTTCGAGTAAGATCCGGGC 59.864 52.381 0.00 0.00 0.00 6.13
824 1407 1.134907 GTTTCGAGTAAGATCCGGGCA 60.135 52.381 0.00 0.00 0.00 5.36
865 1535 0.446222 CGTGGGATTCGCGTGAATTT 59.554 50.000 24.00 5.02 44.79 1.82
867 1537 1.091537 TGGGATTCGCGTGAATTTCC 58.908 50.000 24.00 24.81 44.79 3.13
881 1551 0.688487 ATTTCCCCGTCGTTCTCCAA 59.312 50.000 0.00 0.00 0.00 3.53
894 1564 3.612247 CTCCAAGGACTGTGCCCCG 62.612 68.421 0.00 0.00 0.00 5.73
902 1572 2.438434 CTGTGCCCCGAACCATCC 60.438 66.667 0.00 0.00 0.00 3.51
935 1605 2.662006 TCGCTTTGAGTGAGATCCAG 57.338 50.000 0.00 0.00 30.20 3.86
998 1668 1.274728 CAACAGGAGGAGGTCTCTGTG 59.725 57.143 0.00 0.00 42.10 3.66
1032 1702 1.685820 CCCCCTTCCTTTCTCGCTT 59.314 57.895 0.00 0.00 0.00 4.68
1033 1703 0.038310 CCCCCTTCCTTTCTCGCTTT 59.962 55.000 0.00 0.00 0.00 3.51
1034 1704 1.547901 CCCCCTTCCTTTCTCGCTTTT 60.548 52.381 0.00 0.00 0.00 2.27
1039 1709 1.238439 TCCTTTCTCGCTTTTGCCAG 58.762 50.000 0.00 0.00 43.93 4.85
1122 1792 2.880963 GAGGTAATCTGAGCTCGCTT 57.119 50.000 9.64 4.92 34.50 4.68
1123 1793 3.172229 GAGGTAATCTGAGCTCGCTTT 57.828 47.619 9.64 4.74 34.50 3.51
1124 1794 3.120041 GAGGTAATCTGAGCTCGCTTTC 58.880 50.000 9.64 0.49 34.50 2.62
1125 1795 2.763448 AGGTAATCTGAGCTCGCTTTCT 59.237 45.455 9.64 0.00 0.00 2.52
1126 1796 3.120041 GGTAATCTGAGCTCGCTTTCTC 58.880 50.000 9.64 0.00 0.00 2.87
1127 1797 3.181480 GGTAATCTGAGCTCGCTTTCTCT 60.181 47.826 9.64 0.00 0.00 3.10
1128 1798 2.582728 ATCTGAGCTCGCTTTCTCTG 57.417 50.000 9.64 0.00 0.00 3.35
1129 1799 1.539157 TCTGAGCTCGCTTTCTCTGA 58.461 50.000 9.64 0.00 35.75 3.27
1130 1800 1.889170 TCTGAGCTCGCTTTCTCTGAA 59.111 47.619 9.64 0.00 35.37 3.02
1131 1801 2.094803 TCTGAGCTCGCTTTCTCTGAAG 60.095 50.000 9.64 0.00 35.37 3.02
1132 1802 1.615883 TGAGCTCGCTTTCTCTGAAGT 59.384 47.619 9.64 0.00 0.00 3.01
1133 1803 2.036475 TGAGCTCGCTTTCTCTGAAGTT 59.964 45.455 9.64 0.00 0.00 2.66
1134 1804 2.666022 GAGCTCGCTTTCTCTGAAGTTC 59.334 50.000 0.00 0.00 0.00 3.01
1135 1805 2.036475 AGCTCGCTTTCTCTGAAGTTCA 59.964 45.455 5.25 5.25 0.00 3.18
1136 1806 2.999355 GCTCGCTTTCTCTGAAGTTCAT 59.001 45.455 5.91 0.00 0.00 2.57
1137 1807 3.181522 GCTCGCTTTCTCTGAAGTTCATG 60.182 47.826 5.91 2.99 0.00 3.07
1138 1808 3.993081 CTCGCTTTCTCTGAAGTTCATGT 59.007 43.478 5.91 0.00 0.00 3.21
1139 1809 3.990469 TCGCTTTCTCTGAAGTTCATGTC 59.010 43.478 5.91 0.00 0.00 3.06
1171 1859 5.405571 GTGCTTCCGGTCAACTATGTATATG 59.594 44.000 0.00 0.00 0.00 1.78
1176 1864 4.923871 CCGGTCAACTATGTATATGCTGTC 59.076 45.833 0.00 0.00 0.00 3.51
1210 1898 2.029073 CTTGTCGCTGACGGTGGT 59.971 61.111 0.00 0.00 40.63 4.16
1225 1913 2.900337 GGTTCGCCCCATTAGCCG 60.900 66.667 0.00 0.00 0.00 5.52
1348 2039 1.725665 CAGTGCAGATGCGAATGGG 59.274 57.895 0.00 0.00 45.83 4.00
1392 2083 4.281182 GGGCTAGAGCTGTACTGCTTAATA 59.719 45.833 25.66 17.59 44.17 0.98
1447 2146 4.270834 CTCCACTGCTAACTAGTACTCCA 58.729 47.826 0.00 0.00 0.00 3.86
1588 2321 0.736053 TTTTTGTGTGGTCTGACGCC 59.264 50.000 1.07 0.00 0.00 5.68
1593 2326 4.664677 GTGGTCTGACGCCGCTGT 62.665 66.667 1.07 0.00 33.96 4.40
1670 2403 0.105039 GTATGGAGGAGGTTGAGCCG 59.895 60.000 0.00 0.00 43.70 5.52
1746 2479 8.883731 GCACTTCTGTATGTTGTTGATAACTAT 58.116 33.333 0.00 0.00 0.00 2.12
1781 2515 5.105756 GGAAACTGAGTGTATTGGGAAATGG 60.106 44.000 0.00 0.00 0.00 3.16
1785 2519 3.013921 GAGTGTATTGGGAAATGGCGAA 58.986 45.455 0.00 0.00 0.00 4.70
1807 2541 1.609208 GTTGTTGCAGTGGGATGACT 58.391 50.000 0.00 0.00 0.00 3.41
2051 2789 4.636206 GTCCTCCAACCATTTCATAGTGAC 59.364 45.833 0.00 0.00 0.00 3.67
2078 2816 9.511144 AAGTTCAATTTCACTAAAGTTAAACCG 57.489 29.630 0.00 0.00 0.00 4.44
2186 2924 2.937591 AGCAGCATTTTGATCAACGTG 58.062 42.857 7.89 10.89 0.00 4.49
2222 2960 6.424509 CGTCTCTGATATTACTTCTACCTCGT 59.575 42.308 0.00 0.00 0.00 4.18
2223 2961 7.598118 CGTCTCTGATATTACTTCTACCTCGTA 59.402 40.741 0.00 0.00 0.00 3.43
2317 3061 2.429610 CCCTCAAATCCAGGAATGCTTG 59.570 50.000 0.00 0.00 31.91 4.01
2359 3103 3.118592 AGAGCTTCTTACTGGCCATGTAC 60.119 47.826 5.51 0.00 0.00 2.90
2376 3120 2.102109 TACGTCGCAAGGGAGGCAAA 62.102 55.000 0.00 0.00 38.47 3.68
2416 3160 1.486726 GGCTATAACAGTCTGGGTGCT 59.513 52.381 4.53 0.00 0.00 4.40
2419 3163 3.623510 GCTATAACAGTCTGGGTGCTTTC 59.376 47.826 4.53 0.00 0.00 2.62
2468 3212 8.375506 TCCAAGTTAGTCATACTCAAACTTCAT 58.624 33.333 5.42 0.00 35.79 2.57
2490 3234 7.229308 TCATTGATTATCTCTGCCTTATGCTT 58.771 34.615 0.00 0.00 42.00 3.91
2501 3245 2.744494 GCCTTATGCTTCCCTCTCACAG 60.744 54.545 0.00 0.00 36.87 3.66
2536 3280 4.510711 CAGGCATACTATCTGAAAGTGCAG 59.489 45.833 0.00 0.00 37.24 4.41
2557 3301 2.463589 ATCCAGTCGAAAAGGCGCCA 62.464 55.000 31.54 2.66 0.00 5.69
2563 3307 0.816018 TCGAAAAGGCGCCAACAGAA 60.816 50.000 31.54 6.85 0.00 3.02
2566 3310 2.127251 GAAAAGGCGCCAACAGAAAAG 58.873 47.619 31.54 0.00 0.00 2.27
2631 3375 0.675522 TACCCAGTAAGCGGCTTTGC 60.676 55.000 21.72 13.91 0.00 3.68
2641 3385 1.015607 GCGGCTTTGCATTTGAAGGG 61.016 55.000 0.00 0.00 34.15 3.95
2747 3491 6.239657 CCTTATCTCTGAATCTGGCAAGAGAT 60.240 42.308 24.37 24.37 43.11 2.75
2931 3676 0.321564 TGAGAATCAACCCAGCGGTG 60.322 55.000 7.86 7.86 45.97 4.94
2988 3733 1.752683 AGGACTACGACGAAGCATCT 58.247 50.000 0.00 0.00 0.00 2.90
2990 3735 1.192793 GACTACGACGAAGCATCTGC 58.807 55.000 0.00 0.00 42.49 4.26
3056 3801 2.301296 CAGAGTTCCAGGAGCTGAAGAA 59.699 50.000 11.22 0.00 32.44 2.52
3098 3843 2.033801 CCAGTGCAAGTCCTGAAAAGTG 59.966 50.000 3.73 0.00 0.00 3.16
3099 3844 2.945008 CAGTGCAAGTCCTGAAAAGTGA 59.055 45.455 0.00 0.00 0.00 3.41
3100 3845 3.378112 CAGTGCAAGTCCTGAAAAGTGAA 59.622 43.478 0.00 0.00 0.00 3.18
3101 3846 4.016444 AGTGCAAGTCCTGAAAAGTGAAA 58.984 39.130 0.00 0.00 0.00 2.69
3102 3847 4.462483 AGTGCAAGTCCTGAAAAGTGAAAA 59.538 37.500 0.00 0.00 0.00 2.29
3103 3848 4.800471 GTGCAAGTCCTGAAAAGTGAAAAG 59.200 41.667 0.00 0.00 0.00 2.27
3104 3849 4.462483 TGCAAGTCCTGAAAAGTGAAAAGT 59.538 37.500 0.00 0.00 0.00 2.66
3162 3908 4.154195 CAGTAATGTTGGGTGTGCTAAGTC 59.846 45.833 0.00 0.00 0.00 3.01
3181 3927 4.428209 AGTCGTTTCAGATATGCTGTCAG 58.572 43.478 0.00 0.00 45.14 3.51
3184 3930 3.001026 CGTTTCAGATATGCTGTCAGCTG 59.999 47.826 24.76 14.50 45.14 4.24
3186 3932 3.449528 TCAGATATGCTGTCAGCTGTC 57.550 47.619 24.76 18.23 45.14 3.51
3188 3934 3.124560 CAGATATGCTGTCAGCTGTCAG 58.875 50.000 29.45 29.45 42.97 3.51
3189 3935 2.765135 AGATATGCTGTCAGCTGTCAGT 59.235 45.455 32.04 20.73 42.97 3.41
3216 3972 1.930204 TGGTCCTGAGGGTCTCTATGA 59.070 52.381 0.00 0.00 0.00 2.15
3226 3982 5.163269 TGAGGGTCTCTATGATTGTTCCATG 60.163 44.000 0.00 0.00 0.00 3.66
3229 3985 6.386927 AGGGTCTCTATGATTGTTCCATGTAA 59.613 38.462 0.00 0.00 0.00 2.41
3232 3988 7.047891 GTCTCTATGATTGTTCCATGTAACCA 58.952 38.462 0.00 0.00 0.00 3.67
3233 3989 7.552687 GTCTCTATGATTGTTCCATGTAACCAA 59.447 37.037 0.00 0.00 0.00 3.67
3234 3990 7.552687 TCTCTATGATTGTTCCATGTAACCAAC 59.447 37.037 0.00 0.00 0.00 3.77
3235 3991 7.402054 TCTATGATTGTTCCATGTAACCAACT 58.598 34.615 0.00 0.00 0.00 3.16
3236 3992 8.544622 TCTATGATTGTTCCATGTAACCAACTA 58.455 33.333 0.00 0.00 0.00 2.24
3237 3993 9.173021 CTATGATTGTTCCATGTAACCAACTAA 57.827 33.333 0.00 0.00 0.00 2.24
3267 4023 5.748592 GACAACTTGTACATTGTCCTTCAC 58.251 41.667 23.19 6.08 45.90 3.18
3317 7948 3.947910 ATCAAAGCCTCAAACACCATG 57.052 42.857 0.00 0.00 0.00 3.66
3321 7952 3.446442 AAGCCTCAAACACCATGATCT 57.554 42.857 0.00 0.00 0.00 2.75
3328 7959 3.940852 TCAAACACCATGATCTTCCATCG 59.059 43.478 0.00 0.00 0.00 3.84
3329 7960 1.959042 ACACCATGATCTTCCATCGC 58.041 50.000 0.00 0.00 0.00 4.58
3355 7986 1.740285 CTACCGAGGCCGTGCTATT 59.260 57.895 0.00 0.00 0.00 1.73
3362 7993 3.937062 GCCGTGCTATTTCGGGCG 61.937 66.667 5.78 0.00 45.85 6.13
3363 7994 2.510691 CCGTGCTATTTCGGGCGT 60.511 61.111 0.00 0.00 42.61 5.68
3369 8000 1.937223 TGCTATTTCGGGCGTACAATG 59.063 47.619 0.00 0.00 0.00 2.82
3373 8004 0.875728 TTTCGGGCGTACAATGGTTG 59.124 50.000 0.00 0.00 0.00 3.77
3378 8009 0.596082 GGCGTACAATGGTTGCAACT 59.404 50.000 27.64 11.27 0.00 3.16
3383 8014 3.124636 CGTACAATGGTTGCAACTAGTCC 59.875 47.826 27.64 12.53 0.00 3.85
3386 8017 1.826385 ATGGTTGCAACTAGTCCTGC 58.174 50.000 27.64 11.84 39.09 4.85
3388 8019 1.298859 GGTTGCAACTAGTCCTGCCG 61.299 60.000 27.64 0.00 37.79 5.69
3392 8023 0.107654 GCAACTAGTCCTGCCGGATT 60.108 55.000 5.05 0.00 42.43 3.01
3394 8025 0.541863 AACTAGTCCTGCCGGATTGG 59.458 55.000 5.05 3.06 42.43 3.16
3399 8030 1.625818 AGTCCTGCCGGATTGGATATC 59.374 52.381 5.05 0.00 42.43 1.63
3403 8034 3.706594 TCCTGCCGGATTGGATATCTATC 59.293 47.826 5.05 6.30 42.00 2.08
3408 8039 5.939883 TGCCGGATTGGATATCTATCTTTTG 59.060 40.000 5.05 0.27 42.00 2.44
3410 8041 6.092807 GCCGGATTGGATATCTATCTTTTGTC 59.907 42.308 5.05 0.00 42.00 3.18
3411 8042 6.311445 CCGGATTGGATATCTATCTTTTGTCG 59.689 42.308 0.00 4.70 42.00 4.35
3414 8045 8.930760 GGATTGGATATCTATCTTTTGTCGAAG 58.069 37.037 2.05 0.00 33.28 3.79
3415 8046 9.698309 GATTGGATATCTATCTTTTGTCGAAGA 57.302 33.333 2.05 0.00 39.76 2.87
3417 8048 8.873215 TGGATATCTATCTTTTGTCGAAGAAC 57.127 34.615 2.05 0.00 38.98 3.01
3418 8049 7.648112 TGGATATCTATCTTTTGTCGAAGAACG 59.352 37.037 2.05 0.00 38.98 3.95
3505 8140 2.724520 GACCTGCATGGGCCAATAG 58.275 57.895 11.89 9.25 38.13 1.73
3508 8143 1.273211 ACCTGCATGGGCCAATAGTTT 60.273 47.619 11.89 0.00 41.11 2.66
3509 8144 1.832998 CCTGCATGGGCCAATAGTTTT 59.167 47.619 11.89 0.00 40.13 2.43
3511 8146 3.524541 CTGCATGGGCCAATAGTTTTTC 58.475 45.455 11.89 0.00 40.13 2.29
3512 8147 2.235898 TGCATGGGCCAATAGTTTTTCC 59.764 45.455 11.89 0.00 40.13 3.13
3513 8148 2.235898 GCATGGGCCAATAGTTTTTCCA 59.764 45.455 11.89 0.00 0.00 3.53
3514 8149 3.860641 CATGGGCCAATAGTTTTTCCAC 58.139 45.455 11.89 0.00 0.00 4.02
3516 8151 3.515562 TGGGCCAATAGTTTTTCCACAT 58.484 40.909 2.13 0.00 0.00 3.21
3527 8184 3.363341 TTTTCCACATGGCTTCGTTTC 57.637 42.857 0.00 0.00 34.44 2.78
3532 8189 3.057596 TCCACATGGCTTCGTTTCATTTC 60.058 43.478 0.00 0.00 34.44 2.17
3536 8193 6.092092 CACATGGCTTCGTTTCATTTCATTA 58.908 36.000 0.00 0.00 0.00 1.90
3539 8196 8.465999 ACATGGCTTCGTTTCATTTCATTATTA 58.534 29.630 0.00 0.00 0.00 0.98
3540 8197 9.467258 CATGGCTTCGTTTCATTTCATTATTAT 57.533 29.630 0.00 0.00 0.00 1.28
3542 8199 9.299963 TGGCTTCGTTTCATTTCATTATTATTG 57.700 29.630 0.00 0.00 0.00 1.90
3543 8200 8.268738 GGCTTCGTTTCATTTCATTATTATTGC 58.731 33.333 0.00 0.00 0.00 3.56
3544 8201 8.806634 GCTTCGTTTCATTTCATTATTATTGCA 58.193 29.630 0.00 0.00 0.00 4.08
3546 8203 8.321678 TCGTTTCATTTCATTATTATTGCACG 57.678 30.769 0.00 0.00 0.00 5.34
3547 8204 7.430793 TCGTTTCATTTCATTATTATTGCACGG 59.569 33.333 0.00 0.00 0.00 4.94
3548 8205 7.305935 CGTTTCATTTCATTATTATTGCACGGG 60.306 37.037 0.00 0.00 0.00 5.28
3549 8206 5.527951 TCATTTCATTATTATTGCACGGGC 58.472 37.500 0.34 0.34 41.68 6.13
3559 8216 4.769047 GCACGGGCAAACCATTTT 57.231 50.000 3.77 0.00 40.22 1.82
3560 8217 3.896317 GCACGGGCAAACCATTTTA 57.104 47.368 3.77 0.00 40.22 1.52
3561 8218 2.378445 GCACGGGCAAACCATTTTAT 57.622 45.000 3.77 0.00 40.22 1.40
3562 8219 2.267426 GCACGGGCAAACCATTTTATC 58.733 47.619 3.77 0.00 40.22 1.75
3563 8220 2.353208 GCACGGGCAAACCATTTTATCA 60.353 45.455 3.77 0.00 40.22 2.15
3564 8221 3.510719 CACGGGCAAACCATTTTATCAG 58.489 45.455 0.00 0.00 40.22 2.90
3565 8222 3.192422 CACGGGCAAACCATTTTATCAGA 59.808 43.478 0.00 0.00 40.22 3.27
3566 8223 3.829601 ACGGGCAAACCATTTTATCAGAA 59.170 39.130 0.00 0.00 40.22 3.02
3567 8224 4.082245 ACGGGCAAACCATTTTATCAGAAG 60.082 41.667 0.00 0.00 40.22 2.85
3568 8225 4.677779 CGGGCAAACCATTTTATCAGAAGG 60.678 45.833 0.00 0.00 40.22 3.46
3569 8226 4.183865 GGCAAACCATTTTATCAGAAGGC 58.816 43.478 0.00 0.00 35.26 4.35
3570 8227 4.081476 GGCAAACCATTTTATCAGAAGGCT 60.081 41.667 0.00 0.00 35.26 4.58
3571 8228 5.482006 GCAAACCATTTTATCAGAAGGCTT 58.518 37.500 0.00 0.00 0.00 4.35
3572 8229 5.578336 GCAAACCATTTTATCAGAAGGCTTC 59.422 40.000 19.53 19.53 0.00 3.86
3573 8230 5.567138 AACCATTTTATCAGAAGGCTTCG 57.433 39.130 20.78 15.49 34.02 3.79
3574 8231 4.589908 ACCATTTTATCAGAAGGCTTCGT 58.410 39.130 20.78 13.51 34.02 3.85
3575 8232 5.010282 ACCATTTTATCAGAAGGCTTCGTT 58.990 37.500 20.78 12.21 34.02 3.85
3576 8233 5.476945 ACCATTTTATCAGAAGGCTTCGTTT 59.523 36.000 20.78 11.88 34.02 3.60
3577 8234 6.030228 CCATTTTATCAGAAGGCTTCGTTTC 58.970 40.000 20.78 0.00 34.02 2.78
3578 8235 6.349280 CCATTTTATCAGAAGGCTTCGTTTCA 60.349 38.462 20.78 4.65 34.02 2.69
3579 8236 6.817765 TTTTATCAGAAGGCTTCGTTTCAT 57.182 33.333 20.78 11.77 34.02 2.57
3580 8237 6.817765 TTTATCAGAAGGCTTCGTTTCATT 57.182 33.333 20.78 0.00 34.02 2.57
3581 8238 6.817765 TTATCAGAAGGCTTCGTTTCATTT 57.182 33.333 20.78 0.00 34.02 2.32
3582 8239 4.749245 TCAGAAGGCTTCGTTTCATTTC 57.251 40.909 20.78 0.00 34.02 2.17
3583 8240 4.133820 TCAGAAGGCTTCGTTTCATTTCA 58.866 39.130 20.78 0.00 34.02 2.69
3584 8241 4.761739 TCAGAAGGCTTCGTTTCATTTCAT 59.238 37.500 20.78 0.00 34.02 2.57
3585 8242 5.241506 TCAGAAGGCTTCGTTTCATTTCATT 59.758 36.000 20.78 0.00 34.02 2.57
3586 8243 6.429692 TCAGAAGGCTTCGTTTCATTTCATTA 59.570 34.615 20.78 0.00 34.02 1.90
3587 8244 7.121168 TCAGAAGGCTTCGTTTCATTTCATTAT 59.879 33.333 20.78 0.00 34.02 1.28
3588 8245 7.756722 CAGAAGGCTTCGTTTCATTTCATTATT 59.243 33.333 20.78 0.00 34.02 1.40
3589 8246 8.956426 AGAAGGCTTCGTTTCATTTCATTATTA 58.044 29.630 20.78 0.00 34.02 0.98
3590 8247 9.736023 GAAGGCTTCGTTTCATTTCATTATTAT 57.264 29.630 12.12 0.00 0.00 1.28
3592 8249 9.520204 AGGCTTCGTTTCATTTCATTATTATTG 57.480 29.630 0.00 0.00 0.00 1.90
3593 8250 8.268738 GGCTTCGTTTCATTTCATTATTATTGC 58.731 33.333 0.00 0.00 0.00 3.56
3594 8251 8.806634 GCTTCGTTTCATTTCATTATTATTGCA 58.193 29.630 0.00 0.00 0.00 4.08
3596 8253 8.321678 TCGTTTCATTTCATTATTATTGCACG 57.678 30.769 0.00 0.00 0.00 5.34
3597 8254 7.430793 TCGTTTCATTTCATTATTATTGCACGG 59.569 33.333 0.00 0.00 0.00 4.94
3598 8255 7.305935 CGTTTCATTTCATTATTATTGCACGGG 60.306 37.037 0.00 0.00 0.00 5.28
3599 8256 5.527951 TCATTTCATTATTATTGCACGGGC 58.472 37.500 0.34 0.34 41.68 6.13
3609 8266 4.769047 GCACGGGCAAACCATTTT 57.231 50.000 3.77 0.00 40.22 1.82
3610 8267 3.896317 GCACGGGCAAACCATTTTA 57.104 47.368 3.77 0.00 40.22 1.52
3611 8268 2.378445 GCACGGGCAAACCATTTTAT 57.622 45.000 3.77 0.00 40.22 1.40
3612 8269 2.267426 GCACGGGCAAACCATTTTATC 58.733 47.619 3.77 0.00 40.22 1.75
3613 8270 2.353208 GCACGGGCAAACCATTTTATCA 60.353 45.455 3.77 0.00 40.22 2.15
3614 8271 3.510719 CACGGGCAAACCATTTTATCAG 58.489 45.455 0.00 0.00 40.22 2.90
3615 8272 3.192422 CACGGGCAAACCATTTTATCAGA 59.808 43.478 0.00 0.00 40.22 3.27
3616 8273 3.829601 ACGGGCAAACCATTTTATCAGAA 59.170 39.130 0.00 0.00 40.22 3.02
3617 8274 4.082245 ACGGGCAAACCATTTTATCAGAAG 60.082 41.667 0.00 0.00 40.22 2.85
3618 8275 4.157656 CGGGCAAACCATTTTATCAGAAGA 59.842 41.667 0.00 0.00 40.22 2.87
3619 8276 5.163519 CGGGCAAACCATTTTATCAGAAGAT 60.164 40.000 0.00 0.00 40.22 2.40
3620 8277 6.044682 GGGCAAACCATTTTATCAGAAGATG 58.955 40.000 0.00 0.00 39.85 2.90
3621 8278 6.044682 GGCAAACCATTTTATCAGAAGATGG 58.955 40.000 0.00 0.00 42.28 3.51
3622 8279 6.127366 GGCAAACCATTTTATCAGAAGATGGA 60.127 38.462 8.53 0.00 39.66 3.41
3623 8280 6.753744 GCAAACCATTTTATCAGAAGATGGAC 59.246 38.462 8.53 0.00 39.66 4.02
3624 8281 6.683974 AACCATTTTATCAGAAGATGGACG 57.316 37.500 8.53 0.00 39.66 4.79
3625 8282 4.576463 ACCATTTTATCAGAAGATGGACGC 59.424 41.667 8.53 0.00 39.66 5.19
3626 8283 4.576053 CCATTTTATCAGAAGATGGACGCA 59.424 41.667 0.00 0.00 39.66 5.24
3627 8284 5.277683 CCATTTTATCAGAAGATGGACGCAG 60.278 44.000 0.00 0.00 39.66 5.18
3628 8285 3.459232 TTATCAGAAGATGGACGCAGG 57.541 47.619 0.00 0.00 35.67 4.85
3629 8286 1.198713 ATCAGAAGATGGACGCAGGT 58.801 50.000 0.00 0.00 31.91 4.00
3630 8287 0.976641 TCAGAAGATGGACGCAGGTT 59.023 50.000 0.00 0.00 0.00 3.50
3631 8288 1.066858 TCAGAAGATGGACGCAGGTTC 60.067 52.381 0.00 0.00 0.00 3.62
3632 8289 0.108615 AGAAGATGGACGCAGGTTCG 60.109 55.000 0.00 0.00 0.00 3.95
3633 8290 0.108804 GAAGATGGACGCAGGTTCGA 60.109 55.000 0.00 0.00 0.00 3.71
3634 8291 0.108615 AAGATGGACGCAGGTTCGAG 60.109 55.000 0.00 0.00 0.00 4.04
3635 8292 0.965866 AGATGGACGCAGGTTCGAGA 60.966 55.000 0.00 0.00 0.00 4.04
3636 8293 0.802607 GATGGACGCAGGTTCGAGAC 60.803 60.000 0.00 0.00 0.00 3.36
3644 8301 4.208632 GGTTCGAGACCTGCATGG 57.791 61.111 8.87 0.00 45.55 3.66
3645 8302 1.450312 GGTTCGAGACCTGCATGGG 60.450 63.158 8.87 0.00 45.55 4.00
3652 8309 2.724520 GACCTGCATGGGCCAATAG 58.275 57.895 11.89 9.25 38.13 1.73
3653 8310 0.106519 GACCTGCATGGGCCAATAGT 60.107 55.000 11.89 3.76 38.13 2.12
3654 8311 0.336048 ACCTGCATGGGCCAATAGTT 59.664 50.000 11.89 0.00 41.11 2.24
3655 8312 1.273211 ACCTGCATGGGCCAATAGTTT 60.273 47.619 11.89 0.00 41.11 2.66
3656 8313 1.832998 CCTGCATGGGCCAATAGTTTT 59.167 47.619 11.89 0.00 40.13 2.43
3657 8314 2.236893 CCTGCATGGGCCAATAGTTTTT 59.763 45.455 11.89 0.00 40.13 1.94
3658 8315 3.524541 CTGCATGGGCCAATAGTTTTTC 58.475 45.455 11.89 0.00 40.13 2.29
3659 8316 2.235898 TGCATGGGCCAATAGTTTTTCC 59.764 45.455 11.89 0.00 40.13 3.13
3660 8317 2.235898 GCATGGGCCAATAGTTTTTCCA 59.764 45.455 11.89 0.00 0.00 3.53
3661 8318 3.860641 CATGGGCCAATAGTTTTTCCAC 58.139 45.455 11.89 0.00 0.00 4.02
3662 8319 2.964209 TGGGCCAATAGTTTTTCCACA 58.036 42.857 2.13 0.00 0.00 4.17
3663 8320 3.515562 TGGGCCAATAGTTTTTCCACAT 58.484 40.909 2.13 0.00 0.00 3.21
3664 8321 3.260380 TGGGCCAATAGTTTTTCCACATG 59.740 43.478 2.13 0.00 0.00 3.21
3665 8322 3.369366 GGGCCAATAGTTTTTCCACATGG 60.369 47.826 4.39 0.00 0.00 3.66
3666 8323 3.261580 GCCAATAGTTTTTCCACATGGC 58.738 45.455 0.00 0.00 44.44 4.40
3667 8324 3.055891 GCCAATAGTTTTTCCACATGGCT 60.056 43.478 6.22 0.00 46.52 4.75
3668 8325 4.563374 GCCAATAGTTTTTCCACATGGCTT 60.563 41.667 6.22 0.00 46.52 4.35
3669 8326 5.170748 CCAATAGTTTTTCCACATGGCTTC 58.829 41.667 0.00 0.00 34.44 3.86
3670 8327 4.701956 ATAGTTTTTCCACATGGCTTCG 57.298 40.909 0.00 0.00 34.44 3.79
3671 8328 2.306847 AGTTTTTCCACATGGCTTCGT 58.693 42.857 0.00 0.00 34.44 3.85
3672 8329 2.693074 AGTTTTTCCACATGGCTTCGTT 59.307 40.909 0.00 0.00 34.44 3.85
3673 8330 3.132111 AGTTTTTCCACATGGCTTCGTTT 59.868 39.130 0.00 0.00 34.44 3.60
3674 8331 3.363341 TTTTCCACATGGCTTCGTTTC 57.637 42.857 0.00 0.00 34.44 2.78
3675 8332 1.974265 TTCCACATGGCTTCGTTTCA 58.026 45.000 0.00 0.00 34.44 2.69
3676 8333 2.198827 TCCACATGGCTTCGTTTCAT 57.801 45.000 0.00 0.00 34.44 2.57
3677 8334 2.513753 TCCACATGGCTTCGTTTCATT 58.486 42.857 0.00 0.00 34.44 2.57
3678 8335 2.890311 TCCACATGGCTTCGTTTCATTT 59.110 40.909 0.00 0.00 34.44 2.32
3679 8336 3.057596 TCCACATGGCTTCGTTTCATTTC 60.058 43.478 0.00 0.00 34.44 2.17
3680 8337 3.305267 CCACATGGCTTCGTTTCATTTCA 60.305 43.478 0.00 0.00 0.00 2.69
3681 8338 4.487948 CACATGGCTTCGTTTCATTTCAT 58.512 39.130 0.00 0.00 0.00 2.57
3682 8339 4.925054 CACATGGCTTCGTTTCATTTCATT 59.075 37.500 0.00 0.00 0.00 2.57
3683 8340 6.092092 CACATGGCTTCGTTTCATTTCATTA 58.908 36.000 0.00 0.00 0.00 1.90
3684 8341 6.753279 CACATGGCTTCGTTTCATTTCATTAT 59.247 34.615 0.00 0.00 0.00 1.28
3685 8342 7.276218 CACATGGCTTCGTTTCATTTCATTATT 59.724 33.333 0.00 0.00 0.00 1.40
3686 8343 8.465999 ACATGGCTTCGTTTCATTTCATTATTA 58.534 29.630 0.00 0.00 0.00 0.98
3687 8344 9.467258 CATGGCTTCGTTTCATTTCATTATTAT 57.533 29.630 0.00 0.00 0.00 1.28
3689 8346 9.299963 TGGCTTCGTTTCATTTCATTATTATTG 57.700 29.630 0.00 0.00 0.00 1.90
3690 8347 8.268738 GGCTTCGTTTCATTTCATTATTATTGC 58.731 33.333 0.00 0.00 0.00 3.56
3691 8348 8.806634 GCTTCGTTTCATTTCATTATTATTGCA 58.193 29.630 0.00 0.00 0.00 4.08
3693 8350 8.321678 TCGTTTCATTTCATTATTATTGCACG 57.678 30.769 0.00 0.00 0.00 5.34
3694 8351 7.430793 TCGTTTCATTTCATTATTATTGCACGG 59.569 33.333 0.00 0.00 0.00 4.94
3695 8352 7.305935 CGTTTCATTTCATTATTATTGCACGGG 60.306 37.037 0.00 0.00 0.00 5.28
3696 8353 5.527951 TCATTTCATTATTATTGCACGGGC 58.472 37.500 0.34 0.34 41.68 6.13
3706 8363 4.769047 GCACGGGCAAACCATTTT 57.231 50.000 3.77 0.00 40.22 1.82
3707 8364 3.896317 GCACGGGCAAACCATTTTA 57.104 47.368 3.77 0.00 40.22 1.52
3708 8365 2.378445 GCACGGGCAAACCATTTTAT 57.622 45.000 3.77 0.00 40.22 1.40
3709 8366 2.267426 GCACGGGCAAACCATTTTATC 58.733 47.619 3.77 0.00 40.22 1.75
3710 8367 2.353208 GCACGGGCAAACCATTTTATCA 60.353 45.455 3.77 0.00 40.22 2.15
3711 8368 3.510719 CACGGGCAAACCATTTTATCAG 58.489 45.455 0.00 0.00 40.22 2.90
3712 8369 3.192422 CACGGGCAAACCATTTTATCAGA 59.808 43.478 0.00 0.00 40.22 3.27
3713 8370 3.829601 ACGGGCAAACCATTTTATCAGAA 59.170 39.130 0.00 0.00 40.22 3.02
3714 8371 4.082245 ACGGGCAAACCATTTTATCAGAAG 60.082 41.667 0.00 0.00 40.22 2.85
3715 8372 4.677779 CGGGCAAACCATTTTATCAGAAGG 60.678 45.833 0.00 0.00 40.22 3.46
3716 8373 4.183865 GGCAAACCATTTTATCAGAAGGC 58.816 43.478 0.00 0.00 35.26 4.35
3717 8374 4.081476 GGCAAACCATTTTATCAGAAGGCT 60.081 41.667 0.00 0.00 35.26 4.58
3718 8375 5.482006 GCAAACCATTTTATCAGAAGGCTT 58.518 37.500 0.00 0.00 0.00 4.35
3719 8376 5.578336 GCAAACCATTTTATCAGAAGGCTTC 59.422 40.000 19.53 19.53 0.00 3.86
3720 8377 5.567138 AACCATTTTATCAGAAGGCTTCG 57.433 39.130 20.78 15.49 34.02 3.79
3721 8378 4.589908 ACCATTTTATCAGAAGGCTTCGT 58.410 39.130 20.78 13.51 34.02 3.85
3722 8379 5.010282 ACCATTTTATCAGAAGGCTTCGTT 58.990 37.500 20.78 12.21 34.02 3.85
3723 8380 5.476945 ACCATTTTATCAGAAGGCTTCGTTT 59.523 36.000 20.78 11.88 34.02 3.60
3724 8381 6.030228 CCATTTTATCAGAAGGCTTCGTTTC 58.970 40.000 20.78 0.00 34.02 2.78
3725 8382 6.349280 CCATTTTATCAGAAGGCTTCGTTTCA 60.349 38.462 20.78 4.65 34.02 2.69
3726 8383 6.817765 TTTTATCAGAAGGCTTCGTTTCAT 57.182 33.333 20.78 11.77 34.02 2.57
3727 8384 6.817765 TTTATCAGAAGGCTTCGTTTCATT 57.182 33.333 20.78 0.00 34.02 2.57
3728 8385 6.817765 TTATCAGAAGGCTTCGTTTCATTT 57.182 33.333 20.78 0.00 34.02 2.32
3729 8386 4.749245 TCAGAAGGCTTCGTTTCATTTC 57.251 40.909 20.78 0.00 34.02 2.17
3730 8387 4.133820 TCAGAAGGCTTCGTTTCATTTCA 58.866 39.130 20.78 0.00 34.02 2.69
3731 8388 4.761739 TCAGAAGGCTTCGTTTCATTTCAT 59.238 37.500 20.78 0.00 34.02 2.57
3732 8389 5.241506 TCAGAAGGCTTCGTTTCATTTCATT 59.758 36.000 20.78 0.00 34.02 2.57
3733 8390 6.429692 TCAGAAGGCTTCGTTTCATTTCATTA 59.570 34.615 20.78 0.00 34.02 1.90
3734 8391 7.121168 TCAGAAGGCTTCGTTTCATTTCATTAT 59.879 33.333 20.78 0.00 34.02 1.28
3735 8392 7.756722 CAGAAGGCTTCGTTTCATTTCATTATT 59.243 33.333 20.78 0.00 34.02 1.40
3736 8393 8.956426 AGAAGGCTTCGTTTCATTTCATTATTA 58.044 29.630 20.78 0.00 34.02 0.98
3737 8394 9.736023 GAAGGCTTCGTTTCATTTCATTATTAT 57.264 29.630 12.12 0.00 0.00 1.28
3739 8396 9.520204 AGGCTTCGTTTCATTTCATTATTATTG 57.480 29.630 0.00 0.00 0.00 1.90
3740 8397 8.268738 GGCTTCGTTTCATTTCATTATTATTGC 58.731 33.333 0.00 0.00 0.00 3.56
3741 8398 8.806634 GCTTCGTTTCATTTCATTATTATTGCA 58.193 29.630 0.00 0.00 0.00 4.08
3743 8400 8.321678 TCGTTTCATTTCATTATTATTGCACG 57.678 30.769 0.00 0.00 0.00 5.34
3744 8401 7.430793 TCGTTTCATTTCATTATTATTGCACGG 59.569 33.333 0.00 0.00 0.00 4.94
3745 8402 7.305935 CGTTTCATTTCATTATTATTGCACGGG 60.306 37.037 0.00 0.00 0.00 5.28
3746 8403 5.527951 TCATTTCATTATTATTGCACGGGC 58.472 37.500 0.34 0.34 41.68 6.13
3756 8413 4.769047 GCACGGGCAAACCATTTT 57.231 50.000 3.77 0.00 40.22 1.82
3757 8414 3.896317 GCACGGGCAAACCATTTTA 57.104 47.368 3.77 0.00 40.22 1.52
3758 8415 2.378445 GCACGGGCAAACCATTTTAT 57.622 45.000 3.77 0.00 40.22 1.40
3759 8416 2.267426 GCACGGGCAAACCATTTTATC 58.733 47.619 3.77 0.00 40.22 1.75
3760 8417 2.353208 GCACGGGCAAACCATTTTATCA 60.353 45.455 3.77 0.00 40.22 2.15
3761 8418 3.510719 CACGGGCAAACCATTTTATCAG 58.489 45.455 0.00 0.00 40.22 2.90
3762 8419 3.192422 CACGGGCAAACCATTTTATCAGA 59.808 43.478 0.00 0.00 40.22 3.27
3763 8420 3.829601 ACGGGCAAACCATTTTATCAGAA 59.170 39.130 0.00 0.00 40.22 3.02
3764 8421 4.082245 ACGGGCAAACCATTTTATCAGAAG 60.082 41.667 0.00 0.00 40.22 2.85
3765 8422 4.157656 CGGGCAAACCATTTTATCAGAAGA 59.842 41.667 0.00 0.00 40.22 2.87
3766 8423 5.163519 CGGGCAAACCATTTTATCAGAAGAT 60.164 40.000 0.00 0.00 40.22 2.40
3767 8424 6.044682 GGGCAAACCATTTTATCAGAAGATG 58.955 40.000 0.00 0.00 39.85 2.90
3768 8425 6.044682 GGCAAACCATTTTATCAGAAGATGG 58.955 40.000 0.00 0.00 42.28 3.51
3769 8426 6.127366 GGCAAACCATTTTATCAGAAGATGGA 60.127 38.462 8.53 0.00 39.66 3.41
3770 8427 6.753744 GCAAACCATTTTATCAGAAGATGGAC 59.246 38.462 8.53 0.00 39.66 4.02
3771 8428 7.260603 CAAACCATTTTATCAGAAGATGGACC 58.739 38.462 8.53 0.00 39.66 4.46
3772 8429 5.449553 ACCATTTTATCAGAAGATGGACCC 58.550 41.667 8.53 0.00 39.66 4.46
3773 8430 5.044179 ACCATTTTATCAGAAGATGGACCCA 60.044 40.000 8.53 0.00 39.66 4.51
3774 8431 5.300286 CCATTTTATCAGAAGATGGACCCAC 59.700 44.000 0.00 0.00 39.66 4.61
3775 8432 4.503714 TTTATCAGAAGATGGACCCACC 57.496 45.455 0.00 0.00 35.67 4.61
3776 8433 0.833287 ATCAGAAGATGGACCCACCG 59.167 55.000 0.00 0.00 42.61 4.94
3777 8434 0.544357 TCAGAAGATGGACCCACCGT 60.544 55.000 0.00 0.00 42.61 4.83
3778 8435 1.191535 CAGAAGATGGACCCACCGTA 58.808 55.000 0.00 0.00 42.61 4.02
3779 8436 1.134788 CAGAAGATGGACCCACCGTAC 60.135 57.143 0.00 0.00 42.61 3.67
3780 8437 0.899720 GAAGATGGACCCACCGTACA 59.100 55.000 0.00 0.00 40.56 2.90
3781 8438 0.902531 AAGATGGACCCACCGTACAG 59.097 55.000 0.00 0.00 39.26 2.74
3782 8439 0.040646 AGATGGACCCACCGTACAGA 59.959 55.000 0.00 0.00 39.26 3.41
3783 8440 0.175073 GATGGACCCACCGTACAGAC 59.825 60.000 0.00 0.00 39.26 3.51
3784 8441 0.252103 ATGGACCCACCGTACAGACT 60.252 55.000 0.00 0.00 39.26 3.24
3785 8442 0.896940 TGGACCCACCGTACAGACTC 60.897 60.000 0.00 0.00 42.61 3.36
3786 8443 1.602327 GGACCCACCGTACAGACTCC 61.602 65.000 0.00 0.00 0.00 3.85
3787 8444 0.896940 GACCCACCGTACAGACTCCA 60.897 60.000 0.00 0.00 0.00 3.86
3788 8445 1.183676 ACCCACCGTACAGACTCCAC 61.184 60.000 0.00 0.00 0.00 4.02
3789 8446 1.183030 CCCACCGTACAGACTCCACA 61.183 60.000 0.00 0.00 0.00 4.17
3790 8447 0.038526 CCACCGTACAGACTCCACAC 60.039 60.000 0.00 0.00 0.00 3.82
3791 8448 0.671796 CACCGTACAGACTCCACACA 59.328 55.000 0.00 0.00 0.00 3.72
3792 8449 1.067974 CACCGTACAGACTCCACACAA 59.932 52.381 0.00 0.00 0.00 3.33
3793 8450 1.968493 ACCGTACAGACTCCACACAAT 59.032 47.619 0.00 0.00 0.00 2.71
3794 8451 3.057104 CACCGTACAGACTCCACACAATA 60.057 47.826 0.00 0.00 0.00 1.90
3795 8452 3.192844 ACCGTACAGACTCCACACAATAG 59.807 47.826 0.00 0.00 0.00 1.73
3796 8453 3.192844 CCGTACAGACTCCACACAATAGT 59.807 47.826 0.00 0.00 0.00 2.12
3797 8454 4.321750 CCGTACAGACTCCACACAATAGTT 60.322 45.833 0.00 0.00 0.00 2.24
3798 8455 5.227908 CGTACAGACTCCACACAATAGTTT 58.772 41.667 0.00 0.00 0.00 2.66
3799 8456 5.694910 CGTACAGACTCCACACAATAGTTTT 59.305 40.000 0.00 0.00 0.00 2.43
3800 8457 6.202188 CGTACAGACTCCACACAATAGTTTTT 59.798 38.462 0.00 0.00 0.00 1.94
3819 8476 2.927864 TTTTTGAGGGGGTCGCCA 59.072 55.556 8.40 0.00 0.00 5.69
3820 8477 1.462928 TTTTTGAGGGGGTCGCCAT 59.537 52.632 8.40 0.00 0.00 4.40
3821 8478 0.699399 TTTTTGAGGGGGTCGCCATA 59.301 50.000 8.40 0.00 0.00 2.74
3822 8479 0.254747 TTTTGAGGGGGTCGCCATAG 59.745 55.000 8.40 0.00 0.00 2.23
3823 8480 2.265467 TTTGAGGGGGTCGCCATAGC 62.265 60.000 8.40 0.00 0.00 2.97
3824 8481 2.844839 GAGGGGGTCGCCATAGCT 60.845 66.667 8.40 0.00 36.60 3.32
3825 8482 2.844839 AGGGGGTCGCCATAGCTC 60.845 66.667 8.40 0.00 36.60 4.09
3826 8483 4.301027 GGGGGTCGCCATAGCTCG 62.301 72.222 8.40 0.00 36.60 5.03
3827 8484 4.301027 GGGGTCGCCATAGCTCGG 62.301 72.222 0.00 0.00 36.60 4.63
3851 8508 0.546598 GGGGACGGAGACCATTTCAT 59.453 55.000 0.00 0.00 46.08 2.57
3856 8513 3.947834 GGACGGAGACCATTTCATTTCAT 59.052 43.478 0.00 0.00 43.12 2.57
3864 8521 5.479375 AGACCATTTCATTTCATGCAGAAGT 59.521 36.000 0.00 0.00 37.57 3.01
3878 8535 2.535317 AAGTGGACCAGGCCCCAT 60.535 61.111 0.00 0.00 34.58 4.00
3960 8974 3.924507 CGAAAGGGGGAAGCCATG 58.075 61.111 0.00 0.00 0.00 3.66
4079 9093 1.449601 CTGTACCCATGCCGTCCAC 60.450 63.158 0.00 0.00 0.00 4.02
4082 9096 2.585341 TACCCATGCCGTCCACGTT 61.585 57.895 0.00 0.00 37.74 3.99
4083 9097 2.114488 TACCCATGCCGTCCACGTTT 62.114 55.000 0.00 0.00 37.74 3.60
4092 9106 3.334751 TCCACGTTTGCGCTCACG 61.335 61.111 24.34 24.34 42.83 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.191535 ATCTCGATTTCCCACCGTGA 58.808 50.000 0.00 0.00 0.00 4.35
57 58 0.806492 GGTCTCGGAGTTTGATCGGC 60.806 60.000 4.69 0.00 0.00 5.54
152 153 1.970092 TTCATTTTCGGACGGGTTGT 58.030 45.000 0.00 0.00 0.00 3.32
159 160 4.028026 CGTGTGTTGTTTTCATTTTCGGAC 60.028 41.667 0.00 0.00 0.00 4.79
190 191 3.947132 CTGCCCTCTCCGCTGTGTG 62.947 68.421 0.00 0.00 0.00 3.82
409 421 1.576421 GGCCGAAAACACTGAGCAG 59.424 57.895 0.00 0.00 0.00 4.24
431 449 1.602920 CGCAAAACAAAAGGAGGAGGC 60.603 52.381 0.00 0.00 0.00 4.70
454 472 3.073735 AGCAGAGCAGAGACCGGG 61.074 66.667 6.32 0.00 0.00 5.73
536 1080 3.998672 GTCGTCGCAGGTCCCCAA 61.999 66.667 0.00 0.00 0.00 4.12
569 1113 1.370172 AGTTCGTCGACGCAGACAC 60.370 57.895 32.19 20.83 40.98 3.67
640 1184 1.509923 GGAGGTCGTACTTCCGTGG 59.490 63.158 0.00 0.00 34.57 4.94
655 1199 2.291217 CCAGGGGGAAGAAGAAAAGGAG 60.291 54.545 0.00 0.00 35.59 3.69
656 1200 1.710809 CCAGGGGGAAGAAGAAAAGGA 59.289 52.381 0.00 0.00 35.59 3.36
724 1276 0.179006 GCCTCTTATTGGGCCTCCAG 60.179 60.000 4.53 0.00 45.04 3.86
760 1338 0.971447 AGGGAGACGAAGGTACTGGC 60.971 60.000 0.00 0.00 40.86 4.85
761 1339 1.104630 GAGGGAGACGAAGGTACTGG 58.895 60.000 0.00 0.00 40.86 4.00
785 1368 1.251251 CTTTGGGGAGAAAGTGGCAG 58.749 55.000 0.00 0.00 0.00 4.85
802 1385 2.418334 GCCCGGATCTTACTCGAAACTT 60.418 50.000 0.73 0.00 0.00 2.66
823 1406 3.866582 GTGGAGGGGAGCCGGATG 61.867 72.222 5.05 0.00 0.00 3.51
865 1535 2.280552 CCTTGGAGAACGACGGGGA 61.281 63.158 0.00 0.00 0.00 4.81
867 1537 1.080025 GTCCTTGGAGAACGACGGG 60.080 63.158 0.00 0.00 0.00 5.28
881 1551 3.637273 GGTTCGGGGCACAGTCCT 61.637 66.667 0.00 0.00 0.00 3.85
912 1582 0.107945 ATCTCACTCAAAGCGAGCCC 60.108 55.000 0.00 0.00 46.63 5.19
935 1605 2.573340 CAATGGCGGCCCAAGAAC 59.427 61.111 17.97 0.00 46.14 3.01
976 1646 0.907230 AGAGACCTCCTCCTGTTGCC 60.907 60.000 0.00 0.00 42.97 4.52
998 1668 2.592861 GGGAGATGACGGGCATGC 60.593 66.667 9.90 9.90 37.34 4.06
1097 1767 3.262420 GAGCTCAGATTACCTCGCAAAA 58.738 45.455 9.40 0.00 0.00 2.44
1122 1792 7.554118 ACAAAAGAAGACATGAACTTCAGAGAA 59.446 33.333 25.87 0.00 44.01 2.87
1123 1793 7.011763 CACAAAAGAAGACATGAACTTCAGAGA 59.988 37.037 25.87 0.00 44.01 3.10
1124 1794 7.130917 CACAAAAGAAGACATGAACTTCAGAG 58.869 38.462 25.87 18.57 44.01 3.35
1125 1795 6.458751 GCACAAAAGAAGACATGAACTTCAGA 60.459 38.462 25.87 0.00 44.01 3.27
1126 1796 5.684626 GCACAAAAGAAGACATGAACTTCAG 59.315 40.000 25.87 18.58 44.01 3.02
1127 1797 5.357878 AGCACAAAAGAAGACATGAACTTCA 59.642 36.000 25.87 0.00 44.01 3.02
1128 1798 5.825507 AGCACAAAAGAAGACATGAACTTC 58.174 37.500 20.77 20.77 42.53 3.01
1129 1799 5.841957 AGCACAAAAGAAGACATGAACTT 57.158 34.783 0.00 4.59 0.00 2.66
1130 1800 5.221126 GGAAGCACAAAAGAAGACATGAACT 60.221 40.000 0.00 0.00 0.00 3.01
1131 1801 4.978580 GGAAGCACAAAAGAAGACATGAAC 59.021 41.667 0.00 0.00 0.00 3.18
1132 1802 4.261155 CGGAAGCACAAAAGAAGACATGAA 60.261 41.667 0.00 0.00 0.00 2.57
1133 1803 3.250762 CGGAAGCACAAAAGAAGACATGA 59.749 43.478 0.00 0.00 0.00 3.07
1134 1804 3.558505 CGGAAGCACAAAAGAAGACATG 58.441 45.455 0.00 0.00 0.00 3.21
1135 1805 2.554032 CCGGAAGCACAAAAGAAGACAT 59.446 45.455 0.00 0.00 0.00 3.06
1136 1806 1.946768 CCGGAAGCACAAAAGAAGACA 59.053 47.619 0.00 0.00 0.00 3.41
1137 1807 1.947456 ACCGGAAGCACAAAAGAAGAC 59.053 47.619 9.46 0.00 0.00 3.01
1138 1808 2.218603 GACCGGAAGCACAAAAGAAGA 58.781 47.619 9.46 0.00 0.00 2.87
1139 1809 1.946768 TGACCGGAAGCACAAAAGAAG 59.053 47.619 9.46 0.00 0.00 2.85
1171 1859 3.357079 CAAGGCCACACCGACAGC 61.357 66.667 5.01 0.00 46.52 4.40
1225 1913 3.550437 AGTGTATCCATTCCAGAGCAC 57.450 47.619 0.00 0.00 0.00 4.40
1348 2039 3.265791 CAAGACCACAGTCCAGATTAGC 58.734 50.000 0.00 0.00 44.72 3.09
1447 2146 8.757982 ATTGAACTACTCCATTATGCTTCATT 57.242 30.769 0.00 0.00 0.00 2.57
1588 2321 2.531508 GCTTTTGTTTCAACTGACAGCG 59.468 45.455 1.25 0.00 0.00 5.18
1593 2326 2.495270 TGCCTGCTTTTGTTTCAACTGA 59.505 40.909 0.00 0.00 0.00 3.41
1670 2403 6.683861 GCTTGTGGAGAAATGGGGATAAATTC 60.684 42.308 0.00 0.00 0.00 2.17
1746 2479 8.918202 ATACACTCAGTTTCCATTTCTGTTTA 57.082 30.769 0.00 0.00 0.00 2.01
1747 2480 7.823745 ATACACTCAGTTTCCATTTCTGTTT 57.176 32.000 0.00 0.00 0.00 2.83
1749 2482 6.207417 CCAATACACTCAGTTTCCATTTCTGT 59.793 38.462 0.00 0.00 0.00 3.41
1750 2483 6.349611 CCCAATACACTCAGTTTCCATTTCTG 60.350 42.308 0.00 0.00 0.00 3.02
1752 2485 5.710099 TCCCAATACACTCAGTTTCCATTTC 59.290 40.000 0.00 0.00 0.00 2.17
1756 2490 4.715534 TTCCCAATACACTCAGTTTCCA 57.284 40.909 0.00 0.00 0.00 3.53
1766 2500 3.490761 CCATTCGCCATTTCCCAATACAC 60.491 47.826 0.00 0.00 0.00 2.90
1781 2515 0.664166 CCACTGCAACAACCATTCGC 60.664 55.000 0.00 0.00 0.00 4.70
1785 2519 1.203038 TCATCCCACTGCAACAACCAT 60.203 47.619 0.00 0.00 0.00 3.55
1807 2541 2.045045 CAATCCCCTCGCCTTGCA 60.045 61.111 0.00 0.00 0.00 4.08
1852 2586 3.118371 AGAGAAGAACGTGAAACCTTGGT 60.118 43.478 0.00 0.00 0.00 3.67
1908 2644 5.875359 GTGACACTAGGAAATTCAACTAGGG 59.125 44.000 6.90 6.90 42.50 3.53
1914 2650 5.235616 GTCAACGTGACACTAGGAAATTCAA 59.764 40.000 3.68 0.00 46.22 2.69
2027 2763 4.536090 TCACTATGAAATGGTTGGAGGACT 59.464 41.667 0.00 0.00 35.00 3.85
2078 2816 1.872773 ACCTGAAGATCACCTCCTCC 58.127 55.000 0.00 0.00 0.00 4.30
2186 2924 0.952280 TCAGAGACGGACACACACTC 59.048 55.000 0.00 0.00 0.00 3.51
2194 2932 6.711645 AGGTAGAAGTAATATCAGAGACGGAC 59.288 42.308 0.00 0.00 0.00 4.79
2198 2936 7.733402 ACGAGGTAGAAGTAATATCAGAGAC 57.267 40.000 0.00 0.00 0.00 3.36
2317 3061 1.982073 CTCGATCAACCCTTTGCGGC 61.982 60.000 0.00 0.00 32.17 6.53
2359 3103 2.668212 TTTGCCTCCCTTGCGACG 60.668 61.111 0.00 0.00 0.00 5.12
2416 3160 3.057596 GGAGGTGATTGATTGTTGCGAAA 60.058 43.478 0.00 0.00 0.00 3.46
2419 3163 1.811965 TGGAGGTGATTGATTGTTGCG 59.188 47.619 0.00 0.00 0.00 4.85
2490 3234 3.776969 ACAAGCAATATCTGTGAGAGGGA 59.223 43.478 0.00 0.00 0.00 4.20
2501 3245 7.064371 CAGATAGTATGCCTGACAAGCAATATC 59.936 40.741 2.20 10.78 44.83 1.63
2536 3280 0.651031 GCGCCTTTTCGACTGGATAC 59.349 55.000 0.00 0.00 0.00 2.24
2557 3301 2.906354 ACGACTGTGAGCTTTTCTGTT 58.094 42.857 0.00 0.00 0.00 3.16
2563 3307 1.629043 TCCCTACGACTGTGAGCTTT 58.371 50.000 0.00 0.00 0.00 3.51
2566 3310 3.420397 GTTCCCTACGACTGTGAGC 57.580 57.895 0.00 0.00 0.00 4.26
2631 3375 1.379642 GCTCGCTCCCCCTTCAAATG 61.380 60.000 0.00 0.00 0.00 2.32
2747 3491 9.401058 GTACTGTACCTGTAGTAGAAGGAATAA 57.599 37.037 6.70 0.00 37.01 1.40
2886 3631 1.098129 GGAATTCCTGGCTCGCCTTC 61.098 60.000 17.73 4.12 36.94 3.46
2988 3733 3.124270 CCGCATAGTGTTGCCGCA 61.124 61.111 0.00 0.00 39.52 5.69
2990 3735 1.582610 AAACCCGCATAGTGTTGCCG 61.583 55.000 0.00 0.00 39.52 5.69
3004 3749 1.537348 GGACGCTTCAACCAAAAACCC 60.537 52.381 0.00 0.00 0.00 4.11
3056 3801 0.034059 CAGGAACTCCAAGACGCACT 59.966 55.000 0.00 0.00 34.60 4.40
3098 3843 7.272037 TGGTTTGGTTTCATCTCTACTTTTC 57.728 36.000 0.00 0.00 0.00 2.29
3099 3844 7.654022 TTGGTTTGGTTTCATCTCTACTTTT 57.346 32.000 0.00 0.00 0.00 2.27
3100 3845 7.839680 ATTGGTTTGGTTTCATCTCTACTTT 57.160 32.000 0.00 0.00 0.00 2.66
3101 3846 7.725844 AGAATTGGTTTGGTTTCATCTCTACTT 59.274 33.333 0.00 0.00 0.00 2.24
3102 3847 7.175641 CAGAATTGGTTTGGTTTCATCTCTACT 59.824 37.037 0.00 0.00 0.00 2.57
3103 3848 7.174946 TCAGAATTGGTTTGGTTTCATCTCTAC 59.825 37.037 0.00 0.00 0.00 2.59
3104 3849 7.230747 TCAGAATTGGTTTGGTTTCATCTCTA 58.769 34.615 0.00 0.00 0.00 2.43
3162 3908 3.001026 CAGCTGACAGCATATCTGAAACG 59.999 47.826 28.43 0.00 45.56 3.60
3184 3930 1.002430 TCAGGACCATGCTGAACTGAC 59.998 52.381 0.00 0.00 41.94 3.51
3186 3932 1.678123 CCTCAGGACCATGCTGAACTG 60.678 57.143 1.58 0.00 44.20 3.16
3188 3934 0.393537 CCCTCAGGACCATGCTGAAC 60.394 60.000 0.00 0.00 44.20 3.18
3189 3935 0.842030 ACCCTCAGGACCATGCTGAA 60.842 55.000 0.00 0.00 44.20 3.02
3197 3943 2.757894 TCATAGAGACCCTCAGGACC 57.242 55.000 0.00 0.00 36.73 4.46
3199 3945 4.271807 ACAATCATAGAGACCCTCAGGA 57.728 45.455 0.00 0.00 36.73 3.86
3216 3972 7.657336 CAACTTAGTTGGTTACATGGAACAAT 58.343 34.615 22.22 4.79 40.16 2.71
3262 4018 0.319555 TCGGCTCCGAAACAGTGAAG 60.320 55.000 8.76 0.00 46.01 3.02
3282 4038 7.178983 TGAGGCTTTGATTAAAAATGGAGTGAT 59.821 33.333 0.00 0.00 0.00 3.06
3290 4046 7.278875 TGGTGTTTGAGGCTTTGATTAAAAAT 58.721 30.769 0.00 0.00 0.00 1.82
3295 7926 5.076182 TCATGGTGTTTGAGGCTTTGATTA 58.924 37.500 0.00 0.00 0.00 1.75
3317 7948 1.206072 GCATGCGCGATGGAAGATC 59.794 57.895 12.10 0.00 31.99 2.75
3347 7978 0.802994 TGTACGCCCGAAATAGCACG 60.803 55.000 0.00 0.00 0.00 5.34
3351 7982 2.557317 ACCATTGTACGCCCGAAATAG 58.443 47.619 0.00 0.00 0.00 1.73
3355 7986 1.579084 GCAACCATTGTACGCCCGAA 61.579 55.000 0.00 0.00 0.00 4.30
3362 7993 4.154195 CAGGACTAGTTGCAACCATTGTAC 59.846 45.833 25.62 18.20 0.00 2.90
3363 7994 4.323417 CAGGACTAGTTGCAACCATTGTA 58.677 43.478 25.62 10.33 0.00 2.41
3369 8000 1.298859 CGGCAGGACTAGTTGCAACC 61.299 60.000 25.62 10.46 42.02 3.77
3373 8004 2.978824 TCCGGCAGGACTAGTTGC 59.021 61.111 10.53 10.53 42.75 4.17
3378 8009 9.453858 AGATAGATATCCAATCCGGCAGGACTA 62.454 44.444 8.08 2.86 40.42 2.59
3383 8014 5.350504 AAGATAGATATCCAATCCGGCAG 57.649 43.478 0.00 0.00 33.17 4.85
3386 8017 6.311445 CGACAAAAGATAGATATCCAATCCGG 59.689 42.308 0.00 0.00 33.17 5.14
3388 8019 8.833231 TTCGACAAAAGATAGATATCCAATCC 57.167 34.615 10.58 0.00 33.17 3.01
3392 8023 7.648112 CGTTCTTCGACAAAAGATAGATATCCA 59.352 37.037 0.00 0.00 42.86 3.41
3394 8025 8.783999 TCGTTCTTCGACAAAAGATAGATATC 57.216 34.615 0.00 0.00 44.01 1.63
3410 8041 0.443869 CCACTTGGCATCGTTCTTCG 59.556 55.000 0.00 0.00 41.41 3.79
3505 8140 2.793278 ACGAAGCCATGTGGAAAAAC 57.207 45.000 2.55 0.00 37.39 2.43
3508 8143 2.302260 TGAAACGAAGCCATGTGGAAA 58.698 42.857 2.55 0.00 37.39 3.13
3509 8144 1.974265 TGAAACGAAGCCATGTGGAA 58.026 45.000 2.55 0.00 37.39 3.53
3511 8146 3.244976 GAAATGAAACGAAGCCATGTGG 58.755 45.455 0.00 0.00 38.53 4.17
3512 8147 3.899734 TGAAATGAAACGAAGCCATGTG 58.100 40.909 0.00 0.00 0.00 3.21
3513 8148 4.789012 ATGAAATGAAACGAAGCCATGT 57.211 36.364 0.00 0.00 0.00 3.21
3514 8149 7.760131 AATAATGAAATGAAACGAAGCCATG 57.240 32.000 0.00 0.00 0.00 3.66
3516 8151 9.299963 CAATAATAATGAAATGAAACGAAGCCA 57.700 29.630 0.00 0.00 0.00 4.75
3527 8184 5.288015 TGCCCGTGCAATAATAATGAAATG 58.712 37.500 0.00 0.00 46.66 2.32
3542 8199 2.267426 GATAAAATGGTTTGCCCGTGC 58.733 47.619 0.00 0.00 35.15 5.34
3543 8200 3.192422 TCTGATAAAATGGTTTGCCCGTG 59.808 43.478 0.00 0.00 35.15 4.94
3544 8201 3.426615 TCTGATAAAATGGTTTGCCCGT 58.573 40.909 0.00 0.00 35.15 5.28
3545 8202 4.423732 CTTCTGATAAAATGGTTTGCCCG 58.576 43.478 0.00 0.00 35.15 6.13
3546 8203 4.758688 CCTTCTGATAAAATGGTTTGCCC 58.241 43.478 0.00 0.00 0.00 5.36
3547 8204 4.081476 AGCCTTCTGATAAAATGGTTTGCC 60.081 41.667 0.00 0.00 0.00 4.52
3548 8205 5.077134 AGCCTTCTGATAAAATGGTTTGC 57.923 39.130 0.00 0.00 0.00 3.68
3549 8206 5.801947 CGAAGCCTTCTGATAAAATGGTTTG 59.198 40.000 2.49 0.00 0.00 2.93
3550 8207 5.476945 ACGAAGCCTTCTGATAAAATGGTTT 59.523 36.000 2.49 0.00 0.00 3.27
3551 8208 5.010282 ACGAAGCCTTCTGATAAAATGGTT 58.990 37.500 2.49 0.00 0.00 3.67
3552 8209 4.589908 ACGAAGCCTTCTGATAAAATGGT 58.410 39.130 2.49 0.00 0.00 3.55
3553 8210 5.567138 AACGAAGCCTTCTGATAAAATGG 57.433 39.130 2.49 0.00 0.00 3.16
3554 8211 6.611381 TGAAACGAAGCCTTCTGATAAAATG 58.389 36.000 2.49 0.00 0.00 2.32
3555 8212 6.817765 TGAAACGAAGCCTTCTGATAAAAT 57.182 33.333 2.49 0.00 0.00 1.82
3556 8213 6.817765 ATGAAACGAAGCCTTCTGATAAAA 57.182 33.333 2.49 0.00 0.00 1.52
3557 8214 6.817765 AATGAAACGAAGCCTTCTGATAAA 57.182 33.333 2.49 0.00 0.00 1.40
3558 8215 6.429692 TGAAATGAAACGAAGCCTTCTGATAA 59.570 34.615 2.49 0.00 0.00 1.75
3559 8216 5.937540 TGAAATGAAACGAAGCCTTCTGATA 59.062 36.000 2.49 0.00 0.00 2.15
3560 8217 4.761739 TGAAATGAAACGAAGCCTTCTGAT 59.238 37.500 2.49 0.00 0.00 2.90
3561 8218 4.133820 TGAAATGAAACGAAGCCTTCTGA 58.866 39.130 2.49 0.00 0.00 3.27
3562 8219 4.488126 TGAAATGAAACGAAGCCTTCTG 57.512 40.909 2.49 0.00 0.00 3.02
3563 8220 5.712152 AATGAAATGAAACGAAGCCTTCT 57.288 34.783 2.49 0.00 0.00 2.85
3564 8221 9.736023 ATAATAATGAAATGAAACGAAGCCTTC 57.264 29.630 0.00 0.00 0.00 3.46
3566 8223 9.520204 CAATAATAATGAAATGAAACGAAGCCT 57.480 29.630 0.00 0.00 0.00 4.58
3567 8224 8.268738 GCAATAATAATGAAATGAAACGAAGCC 58.731 33.333 0.00 0.00 0.00 4.35
3568 8225 8.806634 TGCAATAATAATGAAATGAAACGAAGC 58.193 29.630 0.00 0.00 0.00 3.86
3570 8227 8.793472 CGTGCAATAATAATGAAATGAAACGAA 58.207 29.630 0.00 0.00 0.00 3.85
3571 8228 7.430793 CCGTGCAATAATAATGAAATGAAACGA 59.569 33.333 0.00 0.00 0.00 3.85
3572 8229 7.305935 CCCGTGCAATAATAATGAAATGAAACG 60.306 37.037 0.00 0.00 0.00 3.60
3573 8230 7.516627 GCCCGTGCAATAATAATGAAATGAAAC 60.517 37.037 0.00 0.00 37.47 2.78
3574 8231 6.478344 GCCCGTGCAATAATAATGAAATGAAA 59.522 34.615 0.00 0.00 37.47 2.69
3575 8232 5.982516 GCCCGTGCAATAATAATGAAATGAA 59.017 36.000 0.00 0.00 37.47 2.57
3576 8233 5.068329 TGCCCGTGCAATAATAATGAAATGA 59.932 36.000 0.00 0.00 46.66 2.57
3577 8234 5.288015 TGCCCGTGCAATAATAATGAAATG 58.712 37.500 0.00 0.00 46.66 2.32
3578 8235 5.528043 TGCCCGTGCAATAATAATGAAAT 57.472 34.783 0.00 0.00 46.66 2.17
3579 8236 4.991153 TGCCCGTGCAATAATAATGAAA 57.009 36.364 0.00 0.00 46.66 2.69
3592 8249 2.267426 GATAAAATGGTTTGCCCGTGC 58.733 47.619 0.00 0.00 35.15 5.34
3593 8250 3.192422 TCTGATAAAATGGTTTGCCCGTG 59.808 43.478 0.00 0.00 35.15 4.94
3594 8251 3.426615 TCTGATAAAATGGTTTGCCCGT 58.573 40.909 0.00 0.00 35.15 5.28
3595 8252 4.157656 TCTTCTGATAAAATGGTTTGCCCG 59.842 41.667 0.00 0.00 35.15 6.13
3596 8253 5.659440 TCTTCTGATAAAATGGTTTGCCC 57.341 39.130 0.00 0.00 0.00 5.36
3597 8254 6.044682 CCATCTTCTGATAAAATGGTTTGCC 58.955 40.000 0.00 0.00 33.66 4.52
3598 8255 6.753744 GTCCATCTTCTGATAAAATGGTTTGC 59.246 38.462 0.00 0.00 38.41 3.68
3599 8256 6.968904 CGTCCATCTTCTGATAAAATGGTTTG 59.031 38.462 0.00 0.00 38.41 2.93
3600 8257 6.404734 GCGTCCATCTTCTGATAAAATGGTTT 60.405 38.462 0.00 0.00 38.41 3.27
3601 8258 5.066505 GCGTCCATCTTCTGATAAAATGGTT 59.933 40.000 0.00 0.00 38.41 3.67
3602 8259 4.576463 GCGTCCATCTTCTGATAAAATGGT 59.424 41.667 0.00 0.00 38.41 3.55
3603 8260 4.576053 TGCGTCCATCTTCTGATAAAATGG 59.424 41.667 0.00 0.00 38.58 3.16
3604 8261 5.277683 CCTGCGTCCATCTTCTGATAAAATG 60.278 44.000 0.00 0.00 0.00 2.32
3605 8262 4.818546 CCTGCGTCCATCTTCTGATAAAAT 59.181 41.667 0.00 0.00 0.00 1.82
3606 8263 4.191544 CCTGCGTCCATCTTCTGATAAAA 58.808 43.478 0.00 0.00 0.00 1.52
3607 8264 3.197766 ACCTGCGTCCATCTTCTGATAAA 59.802 43.478 0.00 0.00 0.00 1.40
3608 8265 2.766263 ACCTGCGTCCATCTTCTGATAA 59.234 45.455 0.00 0.00 0.00 1.75
3609 8266 2.388735 ACCTGCGTCCATCTTCTGATA 58.611 47.619 0.00 0.00 0.00 2.15
3610 8267 1.198713 ACCTGCGTCCATCTTCTGAT 58.801 50.000 0.00 0.00 0.00 2.90
3611 8268 0.976641 AACCTGCGTCCATCTTCTGA 59.023 50.000 0.00 0.00 0.00 3.27
3612 8269 1.363744 GAACCTGCGTCCATCTTCTG 58.636 55.000 0.00 0.00 0.00 3.02
3613 8270 0.108615 CGAACCTGCGTCCATCTTCT 60.109 55.000 0.00 0.00 0.00 2.85
3614 8271 0.108804 TCGAACCTGCGTCCATCTTC 60.109 55.000 0.00 0.00 0.00 2.87
3615 8272 0.108615 CTCGAACCTGCGTCCATCTT 60.109 55.000 0.00 0.00 0.00 2.40
3616 8273 0.965866 TCTCGAACCTGCGTCCATCT 60.966 55.000 0.00 0.00 0.00 2.90
3617 8274 0.802607 GTCTCGAACCTGCGTCCATC 60.803 60.000 0.00 0.00 0.00 3.51
3618 8275 1.215647 GTCTCGAACCTGCGTCCAT 59.784 57.895 0.00 0.00 0.00 3.41
3619 8276 2.649034 GTCTCGAACCTGCGTCCA 59.351 61.111 0.00 0.00 0.00 4.02
3620 8277 2.126031 GGTCTCGAACCTGCGTCC 60.126 66.667 8.87 0.00 45.45 4.79
3628 8285 2.109126 GCCCATGCAGGTCTCGAAC 61.109 63.158 0.00 0.00 37.47 3.95
3629 8286 2.268920 GCCCATGCAGGTCTCGAA 59.731 61.111 0.00 0.00 37.47 3.71
3630 8287 3.785859 GGCCCATGCAGGTCTCGA 61.786 66.667 0.00 0.00 40.13 4.04
3631 8288 2.898920 ATTGGCCCATGCAGGTCTCG 62.899 60.000 0.00 0.00 40.13 4.04
3632 8289 0.183492 TATTGGCCCATGCAGGTCTC 59.817 55.000 0.00 0.00 40.13 3.36
3633 8290 0.184451 CTATTGGCCCATGCAGGTCT 59.816 55.000 0.00 0.00 40.13 3.85
3634 8291 0.106519 ACTATTGGCCCATGCAGGTC 60.107 55.000 0.00 0.00 40.13 3.85
3635 8292 0.336048 AACTATTGGCCCATGCAGGT 59.664 50.000 0.00 0.00 40.13 4.00
3636 8293 1.488390 AAACTATTGGCCCATGCAGG 58.512 50.000 0.00 0.00 40.13 4.85
3637 8294 3.524541 GAAAAACTATTGGCCCATGCAG 58.475 45.455 0.00 0.00 40.13 4.41
3638 8295 2.235898 GGAAAAACTATTGGCCCATGCA 59.764 45.455 0.00 0.00 40.13 3.96
3639 8296 2.235898 TGGAAAAACTATTGGCCCATGC 59.764 45.455 0.00 0.00 0.00 4.06
3640 8297 3.260380 TGTGGAAAAACTATTGGCCCATG 59.740 43.478 0.00 0.00 0.00 3.66
3641 8298 3.515562 TGTGGAAAAACTATTGGCCCAT 58.484 40.909 0.00 0.00 0.00 4.00
3642 8299 2.964209 TGTGGAAAAACTATTGGCCCA 58.036 42.857 0.00 0.00 0.00 5.36
3643 8300 3.369366 CCATGTGGAAAAACTATTGGCCC 60.369 47.826 0.00 0.00 37.39 5.80
3644 8301 3.860641 CCATGTGGAAAAACTATTGGCC 58.139 45.455 0.00 0.00 37.39 5.36
3645 8302 3.055891 AGCCATGTGGAAAAACTATTGGC 60.056 43.478 2.55 2.47 46.78 4.52
3646 8303 4.806640 AGCCATGTGGAAAAACTATTGG 57.193 40.909 2.55 0.00 37.39 3.16
3647 8304 4.858692 CGAAGCCATGTGGAAAAACTATTG 59.141 41.667 2.55 0.00 37.39 1.90
3648 8305 4.522789 ACGAAGCCATGTGGAAAAACTATT 59.477 37.500 2.55 0.00 37.39 1.73
3649 8306 4.079253 ACGAAGCCATGTGGAAAAACTAT 58.921 39.130 2.55 0.00 37.39 2.12
3650 8307 3.482436 ACGAAGCCATGTGGAAAAACTA 58.518 40.909 2.55 0.00 37.39 2.24
3651 8308 2.306847 ACGAAGCCATGTGGAAAAACT 58.693 42.857 2.55 0.00 37.39 2.66
3652 8309 2.793278 ACGAAGCCATGTGGAAAAAC 57.207 45.000 2.55 0.00 37.39 2.43
3653 8310 3.131223 TGAAACGAAGCCATGTGGAAAAA 59.869 39.130 2.55 0.00 37.39 1.94
3654 8311 2.690497 TGAAACGAAGCCATGTGGAAAA 59.310 40.909 2.55 0.00 37.39 2.29
3655 8312 2.302260 TGAAACGAAGCCATGTGGAAA 58.698 42.857 2.55 0.00 37.39 3.13
3656 8313 1.974265 TGAAACGAAGCCATGTGGAA 58.026 45.000 2.55 0.00 37.39 3.53
3657 8314 2.198827 ATGAAACGAAGCCATGTGGA 57.801 45.000 2.55 0.00 37.39 4.02
3658 8315 3.244976 GAAATGAAACGAAGCCATGTGG 58.755 45.455 0.00 0.00 38.53 4.17
3659 8316 3.899734 TGAAATGAAACGAAGCCATGTG 58.100 40.909 0.00 0.00 0.00 3.21
3660 8317 4.789012 ATGAAATGAAACGAAGCCATGT 57.211 36.364 0.00 0.00 0.00 3.21
3661 8318 7.760131 AATAATGAAATGAAACGAAGCCATG 57.240 32.000 0.00 0.00 0.00 3.66
3663 8320 9.299963 CAATAATAATGAAATGAAACGAAGCCA 57.700 29.630 0.00 0.00 0.00 4.75
3664 8321 8.268738 GCAATAATAATGAAATGAAACGAAGCC 58.731 33.333 0.00 0.00 0.00 4.35
3665 8322 8.806634 TGCAATAATAATGAAATGAAACGAAGC 58.193 29.630 0.00 0.00 0.00 3.86
3667 8324 8.793472 CGTGCAATAATAATGAAATGAAACGAA 58.207 29.630 0.00 0.00 0.00 3.85
3668 8325 7.430793 CCGTGCAATAATAATGAAATGAAACGA 59.569 33.333 0.00 0.00 0.00 3.85
3669 8326 7.305935 CCCGTGCAATAATAATGAAATGAAACG 60.306 37.037 0.00 0.00 0.00 3.60
3670 8327 7.516627 GCCCGTGCAATAATAATGAAATGAAAC 60.517 37.037 0.00 0.00 37.47 2.78
3671 8328 6.478344 GCCCGTGCAATAATAATGAAATGAAA 59.522 34.615 0.00 0.00 37.47 2.69
3672 8329 5.982516 GCCCGTGCAATAATAATGAAATGAA 59.017 36.000 0.00 0.00 37.47 2.57
3673 8330 5.068329 TGCCCGTGCAATAATAATGAAATGA 59.932 36.000 0.00 0.00 46.66 2.57
3674 8331 5.288015 TGCCCGTGCAATAATAATGAAATG 58.712 37.500 0.00 0.00 46.66 2.32
3675 8332 5.528043 TGCCCGTGCAATAATAATGAAAT 57.472 34.783 0.00 0.00 46.66 2.17
3676 8333 4.991153 TGCCCGTGCAATAATAATGAAA 57.009 36.364 0.00 0.00 46.66 2.69
3689 8346 2.267426 GATAAAATGGTTTGCCCGTGC 58.733 47.619 0.00 0.00 35.15 5.34
3690 8347 3.192422 TCTGATAAAATGGTTTGCCCGTG 59.808 43.478 0.00 0.00 35.15 4.94
3691 8348 3.426615 TCTGATAAAATGGTTTGCCCGT 58.573 40.909 0.00 0.00 35.15 5.28
3692 8349 4.423732 CTTCTGATAAAATGGTTTGCCCG 58.576 43.478 0.00 0.00 35.15 6.13
3693 8350 4.758688 CCTTCTGATAAAATGGTTTGCCC 58.241 43.478 0.00 0.00 0.00 5.36
3694 8351 4.081476 AGCCTTCTGATAAAATGGTTTGCC 60.081 41.667 0.00 0.00 0.00 4.52
3695 8352 5.077134 AGCCTTCTGATAAAATGGTTTGC 57.923 39.130 0.00 0.00 0.00 3.68
3696 8353 5.801947 CGAAGCCTTCTGATAAAATGGTTTG 59.198 40.000 2.49 0.00 0.00 2.93
3697 8354 5.476945 ACGAAGCCTTCTGATAAAATGGTTT 59.523 36.000 2.49 0.00 0.00 3.27
3698 8355 5.010282 ACGAAGCCTTCTGATAAAATGGTT 58.990 37.500 2.49 0.00 0.00 3.67
3699 8356 4.589908 ACGAAGCCTTCTGATAAAATGGT 58.410 39.130 2.49 0.00 0.00 3.55
3700 8357 5.567138 AACGAAGCCTTCTGATAAAATGG 57.433 39.130 2.49 0.00 0.00 3.16
3701 8358 6.611381 TGAAACGAAGCCTTCTGATAAAATG 58.389 36.000 2.49 0.00 0.00 2.32
3702 8359 6.817765 TGAAACGAAGCCTTCTGATAAAAT 57.182 33.333 2.49 0.00 0.00 1.82
3703 8360 6.817765 ATGAAACGAAGCCTTCTGATAAAA 57.182 33.333 2.49 0.00 0.00 1.52
3704 8361 6.817765 AATGAAACGAAGCCTTCTGATAAA 57.182 33.333 2.49 0.00 0.00 1.40
3705 8362 6.429692 TGAAATGAAACGAAGCCTTCTGATAA 59.570 34.615 2.49 0.00 0.00 1.75
3706 8363 5.937540 TGAAATGAAACGAAGCCTTCTGATA 59.062 36.000 2.49 0.00 0.00 2.15
3707 8364 4.761739 TGAAATGAAACGAAGCCTTCTGAT 59.238 37.500 2.49 0.00 0.00 2.90
3708 8365 4.133820 TGAAATGAAACGAAGCCTTCTGA 58.866 39.130 2.49 0.00 0.00 3.27
3709 8366 4.488126 TGAAATGAAACGAAGCCTTCTG 57.512 40.909 2.49 0.00 0.00 3.02
3710 8367 5.712152 AATGAAATGAAACGAAGCCTTCT 57.288 34.783 2.49 0.00 0.00 2.85
3711 8368 9.736023 ATAATAATGAAATGAAACGAAGCCTTC 57.264 29.630 0.00 0.00 0.00 3.46
3713 8370 9.520204 CAATAATAATGAAATGAAACGAAGCCT 57.480 29.630 0.00 0.00 0.00 4.58
3714 8371 8.268738 GCAATAATAATGAAATGAAACGAAGCC 58.731 33.333 0.00 0.00 0.00 4.35
3715 8372 8.806634 TGCAATAATAATGAAATGAAACGAAGC 58.193 29.630 0.00 0.00 0.00 3.86
3717 8374 8.793472 CGTGCAATAATAATGAAATGAAACGAA 58.207 29.630 0.00 0.00 0.00 3.85
3718 8375 7.430793 CCGTGCAATAATAATGAAATGAAACGA 59.569 33.333 0.00 0.00 0.00 3.85
3719 8376 7.305935 CCCGTGCAATAATAATGAAATGAAACG 60.306 37.037 0.00 0.00 0.00 3.60
3720 8377 7.516627 GCCCGTGCAATAATAATGAAATGAAAC 60.517 37.037 0.00 0.00 37.47 2.78
3721 8378 6.478344 GCCCGTGCAATAATAATGAAATGAAA 59.522 34.615 0.00 0.00 37.47 2.69
3722 8379 5.982516 GCCCGTGCAATAATAATGAAATGAA 59.017 36.000 0.00 0.00 37.47 2.57
3723 8380 5.068329 TGCCCGTGCAATAATAATGAAATGA 59.932 36.000 0.00 0.00 46.66 2.57
3724 8381 5.288015 TGCCCGTGCAATAATAATGAAATG 58.712 37.500 0.00 0.00 46.66 2.32
3725 8382 5.528043 TGCCCGTGCAATAATAATGAAAT 57.472 34.783 0.00 0.00 46.66 2.17
3726 8383 4.991153 TGCCCGTGCAATAATAATGAAA 57.009 36.364 0.00 0.00 46.66 2.69
3739 8396 2.267426 GATAAAATGGTTTGCCCGTGC 58.733 47.619 0.00 0.00 35.15 5.34
3740 8397 3.192422 TCTGATAAAATGGTTTGCCCGTG 59.808 43.478 0.00 0.00 35.15 4.94
3741 8398 3.426615 TCTGATAAAATGGTTTGCCCGT 58.573 40.909 0.00 0.00 35.15 5.28
3742 8399 4.157656 TCTTCTGATAAAATGGTTTGCCCG 59.842 41.667 0.00 0.00 35.15 6.13
3743 8400 5.659440 TCTTCTGATAAAATGGTTTGCCC 57.341 39.130 0.00 0.00 0.00 5.36
3744 8401 6.044682 CCATCTTCTGATAAAATGGTTTGCC 58.955 40.000 0.00 0.00 33.66 4.52
3745 8402 6.753744 GTCCATCTTCTGATAAAATGGTTTGC 59.246 38.462 0.00 0.00 38.41 3.68
3746 8403 7.260603 GGTCCATCTTCTGATAAAATGGTTTG 58.739 38.462 0.00 0.00 38.41 2.93
3747 8404 6.381133 GGGTCCATCTTCTGATAAAATGGTTT 59.619 38.462 0.00 0.00 38.41 3.27
3748 8405 5.893824 GGGTCCATCTTCTGATAAAATGGTT 59.106 40.000 0.00 0.00 38.41 3.67
3749 8406 5.044179 TGGGTCCATCTTCTGATAAAATGGT 60.044 40.000 0.00 0.00 38.41 3.55
3750 8407 5.300286 GTGGGTCCATCTTCTGATAAAATGG 59.700 44.000 0.00 0.00 38.58 3.16
3751 8408 5.300286 GGTGGGTCCATCTTCTGATAAAATG 59.700 44.000 0.00 0.00 35.97 2.32
3752 8409 5.449553 GGTGGGTCCATCTTCTGATAAAAT 58.550 41.667 0.00 0.00 35.97 1.82
3753 8410 4.625324 CGGTGGGTCCATCTTCTGATAAAA 60.625 45.833 0.00 0.00 35.57 1.52
3754 8411 3.118408 CGGTGGGTCCATCTTCTGATAAA 60.118 47.826 0.00 0.00 35.57 1.40
3755 8412 2.434336 CGGTGGGTCCATCTTCTGATAA 59.566 50.000 0.00 0.00 35.57 1.75
3756 8413 2.039418 CGGTGGGTCCATCTTCTGATA 58.961 52.381 0.00 0.00 35.57 2.15
3757 8414 0.833287 CGGTGGGTCCATCTTCTGAT 59.167 55.000 0.00 0.00 35.57 2.90
3758 8415 0.544357 ACGGTGGGTCCATCTTCTGA 60.544 55.000 0.00 0.00 35.57 3.27
3759 8416 1.134788 GTACGGTGGGTCCATCTTCTG 60.135 57.143 0.00 0.00 35.57 3.02
3760 8417 1.192428 GTACGGTGGGTCCATCTTCT 58.808 55.000 0.00 0.00 35.57 2.85
3761 8418 0.899720 TGTACGGTGGGTCCATCTTC 59.100 55.000 0.00 0.00 35.57 2.87
3762 8419 0.902531 CTGTACGGTGGGTCCATCTT 59.097 55.000 0.00 0.00 35.57 2.40
3763 8420 0.040646 TCTGTACGGTGGGTCCATCT 59.959 55.000 0.64 0.00 35.57 2.90
3764 8421 0.175073 GTCTGTACGGTGGGTCCATC 59.825 60.000 0.64 0.00 35.57 3.51
3765 8422 0.252103 AGTCTGTACGGTGGGTCCAT 60.252 55.000 0.64 0.00 35.57 3.41
3766 8423 0.896940 GAGTCTGTACGGTGGGTCCA 60.897 60.000 0.64 0.00 35.57 4.02
3767 8424 1.602327 GGAGTCTGTACGGTGGGTCC 61.602 65.000 0.64 0.67 0.00 4.46
3768 8425 0.896940 TGGAGTCTGTACGGTGGGTC 60.897 60.000 0.64 0.00 0.00 4.46
3769 8426 1.154454 TGGAGTCTGTACGGTGGGT 59.846 57.895 0.64 0.00 0.00 4.51
3770 8427 1.183030 TGTGGAGTCTGTACGGTGGG 61.183 60.000 0.64 0.00 0.00 4.61
3771 8428 0.038526 GTGTGGAGTCTGTACGGTGG 60.039 60.000 0.64 0.00 0.00 4.61
3772 8429 0.671796 TGTGTGGAGTCTGTACGGTG 59.328 55.000 0.64 0.00 0.00 4.94
3773 8430 1.405872 TTGTGTGGAGTCTGTACGGT 58.594 50.000 0.64 0.00 0.00 4.83
3774 8431 2.743636 ATTGTGTGGAGTCTGTACGG 57.256 50.000 0.00 0.00 0.00 4.02
3775 8432 4.436242 ACTATTGTGTGGAGTCTGTACG 57.564 45.455 0.00 0.00 0.00 3.67
3776 8433 7.492352 AAAAACTATTGTGTGGAGTCTGTAC 57.508 36.000 0.00 0.00 0.00 2.90
3802 8459 0.699399 TATGGCGACCCCCTCAAAAA 59.301 50.000 0.00 0.00 0.00 1.94
3803 8460 0.254747 CTATGGCGACCCCCTCAAAA 59.745 55.000 0.00 0.00 0.00 2.44
3804 8461 1.912220 CTATGGCGACCCCCTCAAA 59.088 57.895 0.00 0.00 0.00 2.69
3805 8462 2.742116 GCTATGGCGACCCCCTCAA 61.742 63.158 0.00 0.00 0.00 3.02
3806 8463 3.161450 GCTATGGCGACCCCCTCA 61.161 66.667 0.00 0.00 0.00 3.86
3807 8464 2.844839 AGCTATGGCGACCCCCTC 60.845 66.667 0.00 0.00 44.37 4.30
3808 8465 2.844839 GAGCTATGGCGACCCCCT 60.845 66.667 0.00 0.00 44.37 4.79
3809 8466 4.301027 CGAGCTATGGCGACCCCC 62.301 72.222 0.00 0.00 44.37 5.40
3810 8467 4.301027 CCGAGCTATGGCGACCCC 62.301 72.222 0.00 0.00 44.37 4.95
3811 8468 3.214250 CTCCGAGCTATGGCGACCC 62.214 68.421 0.00 0.00 44.37 4.46
3812 8469 2.336809 CTCCGAGCTATGGCGACC 59.663 66.667 0.00 0.00 44.37 4.79
3813 8470 2.336809 CCTCCGAGCTATGGCGAC 59.663 66.667 0.00 0.00 44.37 5.19
3814 8471 3.606662 GCCTCCGAGCTATGGCGA 61.607 66.667 0.00 0.00 44.37 5.54
3816 8473 4.671569 CCGCCTCCGAGCTATGGC 62.672 72.222 8.23 8.23 41.76 4.40
3817 8474 3.996124 CCCGCCTCCGAGCTATGG 61.996 72.222 0.00 0.00 36.29 2.74
3818 8475 3.996124 CCCCGCCTCCGAGCTATG 61.996 72.222 0.00 0.00 36.29 2.23
3819 8476 4.220163 TCCCCGCCTCCGAGCTAT 62.220 66.667 0.00 0.00 36.29 2.97
3851 8508 2.507484 CTGGTCCACTTCTGCATGAAA 58.493 47.619 0.00 0.00 33.79 2.69
3856 8513 2.431683 GCCTGGTCCACTTCTGCA 59.568 61.111 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.