Multiple sequence alignment - TraesCS3A01G391700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G391700 chr3A 100.000 6004 0 0 1 6004 639483097 639489100 0.000000e+00 11088.0
1 TraesCS3A01G391700 chr3A 94.558 147 8 0 5858 6004 33448283 33448429 1.680000e-55 228.0
2 TraesCS3A01G391700 chr3A 92.568 148 10 1 5857 6004 61877516 61877662 1.700000e-50 211.0
3 TraesCS3A01G391700 chr3B 96.386 3403 80 11 1965 5338 661203310 661206698 0.000000e+00 5563.0
4 TraesCS3A01G391700 chr3B 90.555 1747 83 23 264 1968 661201426 661203132 0.000000e+00 2237.0
5 TraesCS3A01G391700 chr3B 96.139 259 10 0 1 259 661201102 661201360 2.000000e-114 424.0
6 TraesCS3A01G391700 chr3B 92.857 154 10 1 5851 6004 580114638 580114790 7.830000e-54 222.0
7 TraesCS3A01G391700 chr3B 90.000 150 6 2 5856 6004 41313735 41313876 1.030000e-42 185.0
8 TraesCS3A01G391700 chr3D 95.911 3424 94 14 1965 5349 499991118 499994534 0.000000e+00 5505.0
9 TraesCS3A01G391700 chr3D 88.728 1242 59 32 784 1968 499989725 499990942 0.000000e+00 1443.0
10 TraesCS3A01G391700 chr3D 77.860 673 92 28 1 653 499988756 499989391 1.230000e-96 364.0
11 TraesCS3A01G391700 chr3D 92.568 148 11 0 5857 6004 49450276 49450423 4.710000e-51 213.0
12 TraesCS3A01G391700 chr3D 80.132 151 27 3 5708 5857 121882380 121882232 6.360000e-20 110.0
13 TraesCS3A01G391700 chr4D 95.973 149 6 0 5856 6004 505305656 505305804 6.010000e-60 243.0
14 TraesCS3A01G391700 chr4D 92.617 149 11 0 5856 6004 390905105 390905253 1.310000e-51 215.0
15 TraesCS3A01G391700 chr4D 91.391 151 13 0 5854 6004 234449733 234449583 2.190000e-49 207.0
16 TraesCS3A01G391700 chr4D 89.583 48 3 2 5760 5807 104472618 104472663 6.500000e-05 60.2
17 TraesCS3A01G391700 chr2A 94.631 149 8 0 5856 6004 776499439 776499587 1.300000e-56 231.0
18 TraesCS3A01G391700 chr7B 81.579 152 22 6 5708 5857 175894521 175894374 2.940000e-23 121.0
19 TraesCS3A01G391700 chr2D 81.250 112 17 2 5735 5843 3426587 3426477 2.980000e-13 87.9
20 TraesCS3A01G391700 chr4B 94.595 37 2 0 696 732 571046684 571046648 2.340000e-04 58.4
21 TraesCS3A01G391700 chr4A 100.000 28 0 0 704 731 227091259 227091286 1.100000e-02 52.8
22 TraesCS3A01G391700 chr1A 100.000 28 0 0 232 259 165176792 165176765 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G391700 chr3A 639483097 639489100 6003 False 11088.000000 11088 100.000000 1 6004 1 chr3A.!!$F3 6003
1 TraesCS3A01G391700 chr3B 661201102 661206698 5596 False 2741.333333 5563 94.360000 1 5338 3 chr3B.!!$F3 5337
2 TraesCS3A01G391700 chr3D 499988756 499994534 5778 False 2437.333333 5505 87.499667 1 5349 3 chr3D.!!$F2 5348

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
921 1294 0.693049 ACACGAATCCTTCAGGCCTT 59.307 50.0 0.0 0.0 34.44 4.35 F
1515 1937 0.038166 TGGAGTGAACTGATTGGGGC 59.962 55.0 0.0 0.0 0.00 5.80 F
1922 2352 0.179097 GGTGACTCATCCTTCCTCGC 60.179 60.0 0.0 0.0 0.00 5.03 F
1923 2353 0.532573 GTGACTCATCCTTCCTCGCA 59.467 55.0 0.0 0.0 0.00 5.10 F
3209 3821 0.772341 GCGCTCAAAACTTTTGCTCG 59.228 50.0 16.7 16.7 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1834 2264 0.916086 ACTACCATCGCCCAATTCCA 59.084 50.000 0.00 0.0 0.00 3.53 R
2652 3264 3.006323 AGTCACATACAGCATAGCTAGCC 59.994 47.826 12.13 0.0 36.40 3.93 R
3153 3765 3.775316 AGTTTATACCAGTCCCCTGTCAG 59.225 47.826 0.00 0.0 36.95 3.51 R
3251 3863 4.261801 GGAGAACTGCTGCTGGTTTATTA 58.738 43.478 11.29 0.0 31.32 0.98 R
5062 5681 1.207329 GCTCCGGCTTCTTCTTTCCTA 59.793 52.381 0.00 0.0 35.22 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 8.433421 AAAAATGTCTGTATTATAGACCGTGG 57.567 34.615 15.46 0.00 43.00 4.94
247 249 5.054477 CCGTCCCACAAACGATCTTATATT 58.946 41.667 0.00 0.00 42.62 1.28
259 261 4.217767 CGATCTTATATTGTGGGACGGAGA 59.782 45.833 0.00 0.00 0.00 3.71
260 262 5.278808 CGATCTTATATTGTGGGACGGAGAA 60.279 44.000 0.00 0.00 0.00 2.87
261 263 5.531122 TCTTATATTGTGGGACGGAGAAG 57.469 43.478 0.00 0.00 0.00 2.85
262 264 4.960469 TCTTATATTGTGGGACGGAGAAGT 59.040 41.667 0.00 0.00 0.00 3.01
279 342 7.148272 ACGGAGAAGTTACTACTGATCTAACAC 60.148 40.741 0.00 0.00 34.01 3.32
280 343 7.148289 CGGAGAAGTTACTACTGATCTAACACA 60.148 40.741 0.00 0.00 34.01 3.72
299 362 4.141733 ACACAAAAGAATTTCTTGGGTGGG 60.142 41.667 28.55 21.98 41.59 4.61
308 371 2.855014 TTGGGTGGGGTAGCGGTT 60.855 61.111 0.00 0.00 0.00 4.44
354 420 9.461312 TGATACAAACCAAAACTAATCTAGCAT 57.539 29.630 0.00 0.00 0.00 3.79
370 436 5.677567 TCTAGCATCTGCAAAGATGAATGA 58.322 37.500 17.60 9.46 46.25 2.57
468 534 2.203126 GCCTCCGGCCAATCTGAG 60.203 66.667 2.24 0.00 44.06 3.35
469 535 2.203126 CCTCCGGCCAATCTGAGC 60.203 66.667 2.24 0.00 0.00 4.26
501 576 2.929641 TGACTCTGTTGTGATGCCAAA 58.070 42.857 0.00 0.00 0.00 3.28
503 578 3.316029 TGACTCTGTTGTGATGCCAAAAG 59.684 43.478 0.00 0.00 31.98 2.27
645 761 4.237349 AGTTTCAAGGTTTACGCATTGG 57.763 40.909 0.00 0.00 0.00 3.16
669 791 7.093814 TGGCCGACAACTAGATTTTTACTACTA 60.094 37.037 0.00 0.00 0.00 1.82
671 793 7.221645 GCCGACAACTAGATTTTTACTACTACC 59.778 40.741 0.00 0.00 0.00 3.18
692 814 5.308825 ACCTCTGTCTCAAAATGTTAGTGG 58.691 41.667 0.00 0.00 0.00 4.00
693 815 4.697352 CCTCTGTCTCAAAATGTTAGTGGG 59.303 45.833 0.00 0.00 0.00 4.61
694 816 4.072131 TCTGTCTCAAAATGTTAGTGGGC 58.928 43.478 0.00 0.00 0.00 5.36
700 822 6.705825 GTCTCAAAATGTTAGTGGGCAAAAAT 59.294 34.615 0.00 0.00 0.00 1.82
702 824 5.238214 TCAAAATGTTAGTGGGCAAAAATGC 59.762 36.000 0.00 0.00 0.00 3.56
726 848 6.712276 CCTTACATTTTAAGACAGAGGGAGT 58.288 40.000 0.00 0.00 0.00 3.85
727 849 7.580882 GCCTTACATTTTAAGACAGAGGGAGTA 60.581 40.741 0.00 0.00 0.00 2.59
728 850 8.487028 CCTTACATTTTAAGACAGAGGGAGTAT 58.513 37.037 0.00 0.00 0.00 2.12
763 935 6.861055 ACAATTTTGCTACCGTAGTGATTTTG 59.139 34.615 7.40 8.58 0.00 2.44
764 936 6.569179 ATTTTGCTACCGTAGTGATTTTGT 57.431 33.333 7.40 0.00 0.00 2.83
769 941 5.636121 TGCTACCGTAGTGATTTTGTAACTG 59.364 40.000 7.40 0.00 0.00 3.16
789 1162 4.945246 CTGCGAACAGGGTGTAGTATTAT 58.055 43.478 0.00 0.00 40.48 1.28
815 1188 3.636764 ACAAGCTTTGAACCTTACCCAAG 59.363 43.478 0.00 0.00 0.00 3.61
817 1190 3.487372 AGCTTTGAACCTTACCCAAGAC 58.513 45.455 0.00 0.00 33.20 3.01
903 1276 1.513586 CGTCGCCTTCCGTCAGTAC 60.514 63.158 0.00 0.00 38.35 2.73
918 1291 2.094182 TCAGTACACGAATCCTTCAGGC 60.094 50.000 0.00 0.00 34.44 4.85
919 1292 1.207329 AGTACACGAATCCTTCAGGCC 59.793 52.381 0.00 0.00 34.44 5.19
920 1293 1.207329 GTACACGAATCCTTCAGGCCT 59.793 52.381 0.00 0.00 34.44 5.19
921 1294 0.693049 ACACGAATCCTTCAGGCCTT 59.307 50.000 0.00 0.00 34.44 4.35
922 1295 1.339151 ACACGAATCCTTCAGGCCTTC 60.339 52.381 0.00 0.00 34.44 3.46
923 1296 0.984230 ACGAATCCTTCAGGCCTTCA 59.016 50.000 0.00 0.00 34.44 3.02
924 1297 1.065854 ACGAATCCTTCAGGCCTTCAG 60.066 52.381 0.00 0.71 34.44 3.02
925 1298 1.745141 CGAATCCTTCAGGCCTTCAGG 60.745 57.143 18.16 18.16 38.53 3.86
1057 1466 4.467084 CGGCCGTGGTGTATGCCT 62.467 66.667 19.50 0.00 41.80 4.75
1351 1760 0.328258 CCTCCTCGTTCCCCATTTGT 59.672 55.000 0.00 0.00 0.00 2.83
1354 1763 1.173913 CCTCGTTCCCCATTTGTTCC 58.826 55.000 0.00 0.00 0.00 3.62
1356 1765 1.539827 CTCGTTCCCCATTTGTTCCAC 59.460 52.381 0.00 0.00 0.00 4.02
1357 1766 1.144093 TCGTTCCCCATTTGTTCCACT 59.856 47.619 0.00 0.00 0.00 4.00
1370 1779 2.750237 CCACTTTACCCTGCGCCC 60.750 66.667 4.18 0.00 0.00 6.13
1404 1813 5.163034 TGAAACTTCTGGGGTTAGGATTTGA 60.163 40.000 0.00 0.00 0.00 2.69
1494 1916 0.533951 CTTGATTTGGCAGGCCCTTC 59.466 55.000 8.02 2.82 34.56 3.46
1507 1929 1.528129 GCCCTTCTTGGAGTGAACTG 58.472 55.000 0.00 0.00 38.35 3.16
1515 1937 0.038166 TGGAGTGAACTGATTGGGGC 59.962 55.000 0.00 0.00 0.00 5.80
1518 1940 1.747355 GAGTGAACTGATTGGGGCATG 59.253 52.381 0.00 0.00 0.00 4.06
1527 1949 4.202749 ACTGATTGGGGCATGGATGAATAT 60.203 41.667 0.00 0.00 0.00 1.28
1528 1950 4.090819 TGATTGGGGCATGGATGAATATG 58.909 43.478 0.00 0.00 0.00 1.78
1529 1951 3.899612 TTGGGGCATGGATGAATATGA 57.100 42.857 0.00 0.00 0.00 2.15
1530 1952 3.899612 TGGGGCATGGATGAATATGAA 57.100 42.857 0.00 0.00 0.00 2.57
1531 1953 4.407329 TGGGGCATGGATGAATATGAAT 57.593 40.909 0.00 0.00 0.00 2.57
1532 1954 5.533333 TGGGGCATGGATGAATATGAATA 57.467 39.130 0.00 0.00 0.00 1.75
1569 1991 6.975196 TTTCCTCATTTGGAATGAAAGTGA 57.025 33.333 5.04 0.00 44.55 3.41
1574 1996 6.088016 TCATTTGGAATGAAAGTGACCTTG 57.912 37.500 1.10 0.00 0.00 3.61
1586 2016 4.918810 AGTGACCTTGGTGTTCATTTTC 57.081 40.909 0.00 0.00 0.00 2.29
1587 2017 3.636764 AGTGACCTTGGTGTTCATTTTCC 59.363 43.478 0.00 0.00 0.00 3.13
1602 2032 1.697082 TTTCCGTGTGCAGGTACCCA 61.697 55.000 8.74 0.00 0.00 4.51
1647 2077 1.200020 GTACATTGGTTGGAGCACAGC 59.800 52.381 0.00 0.00 0.00 4.40
1716 2146 4.932200 CAGATTGTTAGAGGCCCGATTATC 59.068 45.833 0.00 0.00 0.00 1.75
1823 2253 5.248640 TCCTTCTGTCCATTTTCTGCTTAG 58.751 41.667 0.00 0.00 0.00 2.18
1834 2264 8.052748 TCCATTTTCTGCTTAGTATGGTAATGT 58.947 33.333 0.00 0.00 35.26 2.71
1885 2315 4.617253 ACTGAAATAGTGCTGTACCACA 57.383 40.909 5.26 0.00 38.49 4.17
1901 2331 7.495934 GCTGTACCACATCAATAGTTTAGACAT 59.504 37.037 0.00 0.00 0.00 3.06
1922 2352 0.179097 GGTGACTCATCCTTCCTCGC 60.179 60.000 0.00 0.00 0.00 5.03
1923 2353 0.532573 GTGACTCATCCTTCCTCGCA 59.467 55.000 0.00 0.00 0.00 5.10
2109 2721 5.186797 TCCAGAATTTTGTGACAAAGTTGGT 59.813 36.000 20.97 7.53 0.00 3.67
2142 2754 7.605449 TGATCATGCATATCGATGACTTAAGA 58.395 34.615 10.09 0.00 34.73 2.10
2303 2915 6.761099 AGTAAGCTCGATTACTCTTCTTCA 57.239 37.500 5.75 0.00 41.11 3.02
2306 2918 4.992688 AGCTCGATTACTCTTCTTCACTG 58.007 43.478 0.00 0.00 0.00 3.66
2336 2948 5.642919 TGCATTGTGAAAGCAAATATTTCCC 59.357 36.000 0.00 0.00 36.11 3.97
2360 2972 8.277713 CCCGAGTATATTTTATGTGGTTTTACG 58.722 37.037 0.00 0.00 0.00 3.18
2670 3282 2.968574 AGTGGCTAGCTATGCTGTATGT 59.031 45.455 15.72 0.00 40.10 2.29
2873 3485 3.815401 GCAAAAGGTTCTCAGAGCTTACA 59.185 43.478 0.00 0.00 36.42 2.41
3098 3710 6.969828 ACAGACGAGGAATTGAAGAATTAC 57.030 37.500 0.00 0.00 33.03 1.89
3153 3765 3.197766 TCCATCTATGAACAGACACCCAC 59.802 47.826 0.00 0.00 0.00 4.61
3180 3792 3.780850 AGGGGACTGGTATAAACTTCTGG 59.219 47.826 0.00 0.00 41.13 3.86
3209 3821 0.772341 GCGCTCAAAACTTTTGCTCG 59.228 50.000 16.70 16.70 0.00 5.03
3251 3863 5.222048 TGTTCTTCTTAGGTACCCAGCAATT 60.222 40.000 8.74 0.00 0.00 2.32
3421 4033 6.876257 CCCTATGAGTAAGATTCTTATGTGGC 59.124 42.308 9.28 0.00 0.00 5.01
3468 4080 7.119116 TGTTGCTGTGGTTTAGTGATATTACAG 59.881 37.037 0.00 0.00 37.82 2.74
3700 4312 3.609853 TGTCAGTTATCTCATTGGGTGC 58.390 45.455 0.00 0.00 0.00 5.01
3962 4574 6.041637 AGTGGTTTATCTTTTCCCCTTTTGTC 59.958 38.462 0.00 0.00 0.00 3.18
4100 4712 8.218488 TGTAACTGCTAGAGATAGTCTATGGAA 58.782 37.037 0.00 0.00 37.14 3.53
4171 4783 3.488384 GCAGTTAGATCTCTCGGTGTCAG 60.488 52.174 0.00 0.00 0.00 3.51
4174 4786 5.007234 CAGTTAGATCTCTCGGTGTCAGTAG 59.993 48.000 0.00 0.00 0.00 2.57
4263 4875 7.176490 AGTATAGACGATGAACTATAAGGGCT 58.824 38.462 0.00 0.00 34.68 5.19
4466 5085 1.888512 GATTGGAGCTTTGACAAGGCA 59.111 47.619 22.55 3.96 0.00 4.75
4736 5355 0.459078 TTACACAACGGTCGTCCACA 59.541 50.000 0.00 0.00 0.00 4.17
4839 5458 6.071560 ACGTGTACATGGATCAAAGAGACTAA 60.072 38.462 19.05 0.00 0.00 2.24
4895 5514 5.381757 TGGGCAACATCTGTAGTAGTTTTT 58.618 37.500 0.00 0.00 39.74 1.94
5057 5676 2.727429 AGGGGGTACAGTACAAGGAA 57.273 50.000 12.89 0.00 0.00 3.36
5062 5681 4.906060 GGGGGTACAGTACAAGGAATCTAT 59.094 45.833 12.89 0.00 0.00 1.98
5066 5685 7.008941 GGGTACAGTACAAGGAATCTATAGGA 58.991 42.308 12.89 0.00 0.00 2.94
5067 5686 7.508296 GGGTACAGTACAAGGAATCTATAGGAA 59.492 40.741 12.89 0.00 0.00 3.36
5165 5807 2.602878 TGCAACTACTGTAGCTAACGC 58.397 47.619 14.55 10.25 0.00 4.84
5215 5857 9.855021 GTTTGTTTAGCTTGGTGTAATTGATAT 57.145 29.630 0.00 0.00 0.00 1.63
5219 5861 7.496529 TTAGCTTGGTGTAATTGATATGCTC 57.503 36.000 0.00 0.00 0.00 4.26
5262 5906 7.990886 AGTCAATTAAGGTGTCTGTGTAGAAAA 59.009 33.333 0.00 0.00 34.01 2.29
5338 5986 7.072454 TCCCTCTGGACTGCTATACAAAATTAT 59.928 37.037 0.00 0.00 35.03 1.28
5362 6010 6.720012 ATGTGTTTTCAAGTTTTTGGTCAC 57.280 33.333 0.00 0.00 34.97 3.67
5363 6011 5.601662 TGTGTTTTCAAGTTTTTGGTCACA 58.398 33.333 0.00 0.00 34.97 3.58
5364 6012 5.463724 TGTGTTTTCAAGTTTTTGGTCACAC 59.536 36.000 0.00 0.00 37.71 3.82
5365 6013 5.463724 GTGTTTTCAAGTTTTTGGTCACACA 59.536 36.000 0.00 0.00 37.46 3.72
5366 6014 6.018669 GTGTTTTCAAGTTTTTGGTCACACAA 60.019 34.615 0.00 0.00 37.46 3.33
5367 6015 6.708054 TGTTTTCAAGTTTTTGGTCACACAAT 59.292 30.769 0.00 0.00 34.97 2.71
5368 6016 6.959671 TTTCAAGTTTTTGGTCACACAATC 57.040 33.333 0.00 0.00 34.97 2.67
5369 6017 5.004922 TCAAGTTTTTGGTCACACAATCC 57.995 39.130 0.00 0.00 34.97 3.01
5370 6018 4.119136 CAAGTTTTTGGTCACACAATCCC 58.881 43.478 0.00 0.00 0.00 3.85
5371 6019 3.642141 AGTTTTTGGTCACACAATCCCT 58.358 40.909 0.00 0.00 0.00 4.20
5372 6020 3.384467 AGTTTTTGGTCACACAATCCCTG 59.616 43.478 0.00 0.00 0.00 4.45
5373 6021 2.746279 TTTGGTCACACAATCCCTGT 57.254 45.000 0.00 0.00 39.56 4.00
5374 6022 3.866703 TTTGGTCACACAATCCCTGTA 57.133 42.857 0.00 0.00 36.10 2.74
5375 6023 3.417069 TTGGTCACACAATCCCTGTAG 57.583 47.619 0.00 0.00 36.10 2.74
5376 6024 1.003118 TGGTCACACAATCCCTGTAGC 59.997 52.381 0.00 0.00 36.10 3.58
5377 6025 1.003118 GGTCACACAATCCCTGTAGCA 59.997 52.381 0.00 0.00 36.10 3.49
5378 6026 2.076863 GTCACACAATCCCTGTAGCAC 58.923 52.381 0.00 0.00 36.10 4.40
5379 6027 1.696884 TCACACAATCCCTGTAGCACA 59.303 47.619 0.00 0.00 36.10 4.57
5380 6028 2.105649 TCACACAATCCCTGTAGCACAA 59.894 45.455 0.00 0.00 36.10 3.33
5381 6029 2.226437 CACACAATCCCTGTAGCACAAC 59.774 50.000 0.00 0.00 36.10 3.32
5382 6030 1.812571 CACAATCCCTGTAGCACAACC 59.187 52.381 0.00 0.00 36.10 3.77
5383 6031 1.086696 CAATCCCTGTAGCACAACCG 58.913 55.000 0.00 0.00 0.00 4.44
5384 6032 0.676782 AATCCCTGTAGCACAACCGC 60.677 55.000 0.00 0.00 0.00 5.68
5385 6033 1.553690 ATCCCTGTAGCACAACCGCT 61.554 55.000 0.00 0.00 46.26 5.52
5386 6034 1.741770 CCCTGTAGCACAACCGCTC 60.742 63.158 0.00 0.00 42.62 5.03
5387 6035 1.293498 CCTGTAGCACAACCGCTCT 59.707 57.895 0.00 0.00 42.62 4.09
5388 6036 1.016130 CCTGTAGCACAACCGCTCTG 61.016 60.000 0.00 0.00 42.62 3.35
5389 6037 0.319900 CTGTAGCACAACCGCTCTGT 60.320 55.000 0.00 0.00 42.62 3.41
5390 6038 0.319555 TGTAGCACAACCGCTCTGTC 60.320 55.000 0.00 0.00 42.62 3.51
5391 6039 0.038159 GTAGCACAACCGCTCTGTCT 60.038 55.000 0.00 0.00 42.62 3.41
5392 6040 0.679505 TAGCACAACCGCTCTGTCTT 59.320 50.000 0.00 0.00 42.62 3.01
5393 6041 0.601311 AGCACAACCGCTCTGTCTTC 60.601 55.000 0.00 0.00 37.91 2.87
5394 6042 0.880278 GCACAACCGCTCTGTCTTCA 60.880 55.000 0.00 0.00 0.00 3.02
5395 6043 1.581934 CACAACCGCTCTGTCTTCAA 58.418 50.000 0.00 0.00 0.00 2.69
5396 6044 1.528586 CACAACCGCTCTGTCTTCAAG 59.471 52.381 0.00 0.00 0.00 3.02
5397 6045 1.139058 ACAACCGCTCTGTCTTCAAGT 59.861 47.619 0.00 0.00 0.00 3.16
5398 6046 2.213499 CAACCGCTCTGTCTTCAAGTT 58.787 47.619 0.00 0.00 0.00 2.66
5399 6047 2.614057 CAACCGCTCTGTCTTCAAGTTT 59.386 45.455 0.00 0.00 0.00 2.66
5400 6048 2.919228 ACCGCTCTGTCTTCAAGTTTT 58.081 42.857 0.00 0.00 0.00 2.43
5401 6049 3.279434 ACCGCTCTGTCTTCAAGTTTTT 58.721 40.909 0.00 0.00 0.00 1.94
5424 6072 7.979115 TTTTTCCACATCTTTAAACGACAAG 57.021 32.000 0.00 0.00 0.00 3.16
5425 6073 6.687081 TTTCCACATCTTTAAACGACAAGT 57.313 33.333 0.00 0.00 0.00 3.16
5426 6074 7.789273 TTTCCACATCTTTAAACGACAAGTA 57.211 32.000 0.00 0.00 0.00 2.24
5427 6075 7.972832 TTCCACATCTTTAAACGACAAGTAT 57.027 32.000 0.00 0.00 0.00 2.12
5428 6076 7.972832 TCCACATCTTTAAACGACAAGTATT 57.027 32.000 0.00 0.00 0.00 1.89
5429 6077 8.385898 TCCACATCTTTAAACGACAAGTATTT 57.614 30.769 0.00 0.00 0.00 1.40
5430 6078 8.500773 TCCACATCTTTAAACGACAAGTATTTC 58.499 33.333 0.00 0.00 0.00 2.17
5431 6079 7.477422 CCACATCTTTAAACGACAAGTATTTCG 59.523 37.037 0.00 0.00 41.14 3.46
5442 6090 8.080083 ACGACAAGTATTTCGTAAAAACATCT 57.920 30.769 0.00 0.00 46.34 2.90
5443 6091 8.219105 ACGACAAGTATTTCGTAAAAACATCTC 58.781 33.333 0.00 0.00 46.34 2.75
5444 6092 7.686938 CGACAAGTATTTCGTAAAAACATCTCC 59.313 37.037 0.00 0.00 0.00 3.71
5445 6093 8.385898 ACAAGTATTTCGTAAAAACATCTCCA 57.614 30.769 0.00 0.00 0.00 3.86
5446 6094 8.842280 ACAAGTATTTCGTAAAAACATCTCCAA 58.158 29.630 0.00 0.00 0.00 3.53
5447 6095 9.113876 CAAGTATTTCGTAAAAACATCTCCAAC 57.886 33.333 0.00 0.00 0.00 3.77
5448 6096 8.385898 AGTATTTCGTAAAAACATCTCCAACA 57.614 30.769 0.00 0.00 0.00 3.33
5449 6097 8.842280 AGTATTTCGTAAAAACATCTCCAACAA 58.158 29.630 0.00 0.00 0.00 2.83
5450 6098 7.924103 ATTTCGTAAAAACATCTCCAACAAC 57.076 32.000 0.00 0.00 0.00 3.32
5451 6099 6.687081 TTCGTAAAAACATCTCCAACAACT 57.313 33.333 0.00 0.00 0.00 3.16
5452 6100 6.687081 TCGTAAAAACATCTCCAACAACTT 57.313 33.333 0.00 0.00 0.00 2.66
5453 6101 6.721321 TCGTAAAAACATCTCCAACAACTTC 58.279 36.000 0.00 0.00 0.00 3.01
5454 6102 6.540914 TCGTAAAAACATCTCCAACAACTTCT 59.459 34.615 0.00 0.00 0.00 2.85
5455 6103 6.851330 CGTAAAAACATCTCCAACAACTTCTC 59.149 38.462 0.00 0.00 0.00 2.87
5456 6104 7.254795 CGTAAAAACATCTCCAACAACTTCTCT 60.255 37.037 0.00 0.00 0.00 3.10
5457 6105 7.410120 AAAAACATCTCCAACAACTTCTCTT 57.590 32.000 0.00 0.00 0.00 2.85
5458 6106 7.410120 AAAACATCTCCAACAACTTCTCTTT 57.590 32.000 0.00 0.00 0.00 2.52
5459 6107 6.625873 AACATCTCCAACAACTTCTCTTTC 57.374 37.500 0.00 0.00 0.00 2.62
5460 6108 5.066593 ACATCTCCAACAACTTCTCTTTCC 58.933 41.667 0.00 0.00 0.00 3.13
5461 6109 5.163152 ACATCTCCAACAACTTCTCTTTCCT 60.163 40.000 0.00 0.00 0.00 3.36
5462 6110 4.708177 TCTCCAACAACTTCTCTTTCCTG 58.292 43.478 0.00 0.00 0.00 3.86
5463 6111 4.164221 TCTCCAACAACTTCTCTTTCCTGT 59.836 41.667 0.00 0.00 0.00 4.00
5464 6112 4.451900 TCCAACAACTTCTCTTTCCTGTC 58.548 43.478 0.00 0.00 0.00 3.51
5465 6113 3.565902 CCAACAACTTCTCTTTCCTGTCC 59.434 47.826 0.00 0.00 0.00 4.02
5466 6114 4.455606 CAACAACTTCTCTTTCCTGTCCT 58.544 43.478 0.00 0.00 0.00 3.85
5467 6115 4.779993 ACAACTTCTCTTTCCTGTCCTT 57.220 40.909 0.00 0.00 0.00 3.36
5468 6116 5.888982 ACAACTTCTCTTTCCTGTCCTTA 57.111 39.130 0.00 0.00 0.00 2.69
5469 6117 5.612351 ACAACTTCTCTTTCCTGTCCTTAC 58.388 41.667 0.00 0.00 0.00 2.34
5470 6118 5.367060 ACAACTTCTCTTTCCTGTCCTTACT 59.633 40.000 0.00 0.00 0.00 2.24
5471 6119 5.731957 ACTTCTCTTTCCTGTCCTTACTC 57.268 43.478 0.00 0.00 0.00 2.59
5472 6120 5.399113 ACTTCTCTTTCCTGTCCTTACTCT 58.601 41.667 0.00 0.00 0.00 3.24
5473 6121 5.841783 ACTTCTCTTTCCTGTCCTTACTCTT 59.158 40.000 0.00 0.00 0.00 2.85
5474 6122 7.011382 ACTTCTCTTTCCTGTCCTTACTCTTA 58.989 38.462 0.00 0.00 0.00 2.10
5475 6123 7.177744 ACTTCTCTTTCCTGTCCTTACTCTTAG 59.822 40.741 0.00 0.00 0.00 2.18
5476 6124 6.791371 TCTCTTTCCTGTCCTTACTCTTAGA 58.209 40.000 0.00 0.00 0.00 2.10
5477 6125 7.239438 TCTCTTTCCTGTCCTTACTCTTAGAA 58.761 38.462 0.00 0.00 0.00 2.10
5478 6126 7.896496 TCTCTTTCCTGTCCTTACTCTTAGAAT 59.104 37.037 0.00 0.00 0.00 2.40
5479 6127 8.437274 TCTTTCCTGTCCTTACTCTTAGAATT 57.563 34.615 0.00 0.00 0.00 2.17
5480 6128 8.314751 TCTTTCCTGTCCTTACTCTTAGAATTG 58.685 37.037 0.00 0.00 0.00 2.32
5481 6129 7.792364 TTCCTGTCCTTACTCTTAGAATTGA 57.208 36.000 0.00 0.00 0.00 2.57
5482 6130 7.411486 TCCTGTCCTTACTCTTAGAATTGAG 57.589 40.000 0.00 0.00 36.47 3.02
5483 6131 6.045955 CCTGTCCTTACTCTTAGAATTGAGC 58.954 44.000 0.00 0.00 33.92 4.26
5484 6132 5.978814 TGTCCTTACTCTTAGAATTGAGCC 58.021 41.667 0.00 0.00 33.92 4.70
5485 6133 5.483937 TGTCCTTACTCTTAGAATTGAGCCA 59.516 40.000 0.00 0.00 33.92 4.75
5486 6134 6.013725 TGTCCTTACTCTTAGAATTGAGCCAA 60.014 38.462 0.00 0.00 33.92 4.52
5487 6135 6.879458 GTCCTTACTCTTAGAATTGAGCCAAA 59.121 38.462 0.00 0.00 33.92 3.28
5488 6136 7.390718 GTCCTTACTCTTAGAATTGAGCCAAAA 59.609 37.037 0.00 0.00 33.92 2.44
5489 6137 7.942341 TCCTTACTCTTAGAATTGAGCCAAAAA 59.058 33.333 0.00 0.00 33.92 1.94
5507 6155 4.338379 AAAAAGCTAGTCCAACGACTCT 57.662 40.909 0.00 0.00 46.90 3.24
5508 6156 3.579335 AAAGCTAGTCCAACGACTCTC 57.421 47.619 0.00 0.00 46.90 3.20
5509 6157 1.088306 AGCTAGTCCAACGACTCTCG 58.912 55.000 0.00 0.00 46.90 4.04
5519 6167 3.888093 CGACTCTCGTTTTCCCAGT 57.112 52.632 0.00 0.00 34.72 4.00
5521 6169 3.293311 CGACTCTCGTTTTCCCAGTAA 57.707 47.619 0.00 0.00 34.72 2.24
5522 6170 3.645884 CGACTCTCGTTTTCCCAGTAAA 58.354 45.455 0.00 0.00 34.72 2.01
5523 6171 4.053295 CGACTCTCGTTTTCCCAGTAAAA 58.947 43.478 0.00 0.00 34.72 1.52
5524 6172 4.689345 CGACTCTCGTTTTCCCAGTAAAAT 59.311 41.667 0.00 0.00 34.72 1.82
5525 6173 5.865552 CGACTCTCGTTTTCCCAGTAAAATA 59.134 40.000 0.00 0.00 34.72 1.40
5526 6174 6.534079 CGACTCTCGTTTTCCCAGTAAAATAT 59.466 38.462 0.00 0.00 34.72 1.28
5527 6175 7.064253 CGACTCTCGTTTTCCCAGTAAAATATT 59.936 37.037 0.00 0.00 34.72 1.28
5528 6176 8.040716 ACTCTCGTTTTCCCAGTAAAATATTG 57.959 34.615 0.00 0.00 31.43 1.90
5529 6177 7.120726 ACTCTCGTTTTCCCAGTAAAATATTGG 59.879 37.037 0.00 0.00 35.51 3.16
5530 6178 6.943718 TCTCGTTTTCCCAGTAAAATATTGGT 59.056 34.615 0.00 0.00 34.04 3.67
5531 6179 6.915349 TCGTTTTCCCAGTAAAATATTGGTG 58.085 36.000 0.00 0.00 34.04 4.17
5532 6180 6.715718 TCGTTTTCCCAGTAAAATATTGGTGA 59.284 34.615 0.00 0.00 34.04 4.02
5533 6181 7.394923 TCGTTTTCCCAGTAAAATATTGGTGAT 59.605 33.333 0.00 0.00 34.04 3.06
5534 6182 8.679100 CGTTTTCCCAGTAAAATATTGGTGATA 58.321 33.333 0.00 0.00 34.04 2.15
5553 6201 2.484558 AAAAACGCAACCTCCACGT 58.515 47.368 0.00 0.00 42.81 4.49
5554 6202 1.666054 AAAAACGCAACCTCCACGTA 58.334 45.000 0.00 0.00 39.49 3.57
5555 6203 1.223187 AAAACGCAACCTCCACGTAG 58.777 50.000 0.00 0.00 39.49 3.51
5556 6204 0.390124 AAACGCAACCTCCACGTAGA 59.610 50.000 0.00 0.00 39.49 2.59
5557 6205 0.038526 AACGCAACCTCCACGTAGAG 60.039 55.000 3.79 3.79 39.49 2.43
5558 6206 0.892358 ACGCAACCTCCACGTAGAGA 60.892 55.000 12.88 0.00 38.45 3.10
5559 6207 0.179161 CGCAACCTCCACGTAGAGAG 60.179 60.000 12.88 7.45 35.82 3.20
5562 6210 4.261701 CCTCCACGTAGAGAGGGG 57.738 66.667 12.88 0.00 43.99 4.79
5563 6211 1.455959 CCTCCACGTAGAGAGGGGG 60.456 68.421 12.88 2.60 43.99 5.40
5564 6212 1.306970 CTCCACGTAGAGAGGGGGT 59.693 63.158 4.89 0.00 35.37 4.95
5565 6213 0.752376 CTCCACGTAGAGAGGGGGTC 60.752 65.000 4.89 0.00 35.37 4.46
5566 6214 1.000019 CCACGTAGAGAGGGGGTCA 60.000 63.158 0.00 0.00 0.00 4.02
5567 6215 1.038130 CCACGTAGAGAGGGGGTCAG 61.038 65.000 0.00 0.00 0.00 3.51
5568 6216 1.038130 CACGTAGAGAGGGGGTCAGG 61.038 65.000 0.00 0.00 0.00 3.86
5569 6217 1.212934 ACGTAGAGAGGGGGTCAGGA 61.213 60.000 0.00 0.00 0.00 3.86
5570 6218 0.033405 CGTAGAGAGGGGGTCAGGAA 60.033 60.000 0.00 0.00 0.00 3.36
5571 6219 1.783071 GTAGAGAGGGGGTCAGGAAG 58.217 60.000 0.00 0.00 0.00 3.46
5572 6220 1.288335 GTAGAGAGGGGGTCAGGAAGA 59.712 57.143 0.00 0.00 0.00 2.87
5573 6221 0.338120 AGAGAGGGGGTCAGGAAGAG 59.662 60.000 0.00 0.00 0.00 2.85
5574 6222 1.306568 AGAGGGGGTCAGGAAGAGC 60.307 63.158 0.00 0.00 43.99 4.09
5575 6223 1.613630 GAGGGGGTCAGGAAGAGCA 60.614 63.158 0.00 0.00 46.51 4.26
5579 6227 2.934083 GGGTCAGGAAGAGCACAAC 58.066 57.895 0.00 0.00 46.51 3.32
5580 6228 0.398318 GGGTCAGGAAGAGCACAACT 59.602 55.000 0.00 0.00 46.51 3.16
5581 6229 1.609320 GGGTCAGGAAGAGCACAACTC 60.609 57.143 0.00 0.00 46.51 3.01
5589 6237 3.944476 GAGCACAACTCCCTCATGT 57.056 52.632 0.00 0.00 39.75 3.21
5590 6238 1.446907 GAGCACAACTCCCTCATGTG 58.553 55.000 0.97 0.97 45.54 3.21
5591 6239 1.002430 GAGCACAACTCCCTCATGTGA 59.998 52.381 9.14 0.00 45.61 3.58
5592 6240 1.002888 AGCACAACTCCCTCATGTGAG 59.997 52.381 9.14 3.01 45.61 3.51
5601 6249 2.559785 CTCATGTGAGGGGTGTTGC 58.440 57.895 2.03 0.00 38.48 4.17
5602 6250 0.962356 CTCATGTGAGGGGTGTTGCC 60.962 60.000 2.03 0.00 38.48 4.52
5611 6259 4.898607 GGTGTTGCCCTTCTCACA 57.101 55.556 0.00 0.00 33.17 3.58
5612 6260 3.109847 GGTGTTGCCCTTCTCACAA 57.890 52.632 0.00 0.00 33.17 3.33
5613 6261 1.620822 GGTGTTGCCCTTCTCACAAT 58.379 50.000 0.00 0.00 33.17 2.71
5614 6262 2.790433 GGTGTTGCCCTTCTCACAATA 58.210 47.619 0.00 0.00 33.17 1.90
5615 6263 2.488153 GGTGTTGCCCTTCTCACAATAC 59.512 50.000 0.00 0.00 35.45 1.89
5616 6264 2.488153 GTGTTGCCCTTCTCACAATACC 59.512 50.000 0.00 0.00 31.54 2.73
5617 6265 2.107378 TGTTGCCCTTCTCACAATACCA 59.893 45.455 0.00 0.00 0.00 3.25
5618 6266 2.488153 GTTGCCCTTCTCACAATACCAC 59.512 50.000 0.00 0.00 0.00 4.16
5619 6267 1.004277 TGCCCTTCTCACAATACCACC 59.996 52.381 0.00 0.00 0.00 4.61
5620 6268 1.682087 GCCCTTCTCACAATACCACCC 60.682 57.143 0.00 0.00 0.00 4.61
5621 6269 1.633432 CCCTTCTCACAATACCACCCA 59.367 52.381 0.00 0.00 0.00 4.51
5622 6270 2.041081 CCCTTCTCACAATACCACCCAA 59.959 50.000 0.00 0.00 0.00 4.12
5623 6271 3.499563 CCCTTCTCACAATACCACCCAAA 60.500 47.826 0.00 0.00 0.00 3.28
5624 6272 3.506067 CCTTCTCACAATACCACCCAAAC 59.494 47.826 0.00 0.00 0.00 2.93
5625 6273 3.149005 TCTCACAATACCACCCAAACC 57.851 47.619 0.00 0.00 0.00 3.27
5626 6274 1.810151 CTCACAATACCACCCAAACCG 59.190 52.381 0.00 0.00 0.00 4.44
5627 6275 1.143277 TCACAATACCACCCAAACCGT 59.857 47.619 0.00 0.00 0.00 4.83
5628 6276 1.268352 CACAATACCACCCAAACCGTG 59.732 52.381 0.00 0.00 0.00 4.94
5636 6284 2.357056 CCAAACCGTGGGCCCATA 59.643 61.111 31.45 1.27 44.64 2.74
5637 6285 1.076339 CCAAACCGTGGGCCCATAT 60.076 57.895 31.45 14.20 44.64 1.78
5638 6286 1.391157 CCAAACCGTGGGCCCATATG 61.391 60.000 31.45 21.46 44.64 1.78
5639 6287 0.682855 CAAACCGTGGGCCCATATGT 60.683 55.000 31.45 22.17 0.00 2.29
5640 6288 0.395173 AAACCGTGGGCCCATATGTC 60.395 55.000 31.45 14.19 0.00 3.06
5641 6289 1.567208 AACCGTGGGCCCATATGTCA 61.567 55.000 31.45 0.00 0.00 3.58
5642 6290 1.525995 CCGTGGGCCCATATGTCAC 60.526 63.158 31.45 12.49 0.00 3.67
5643 6291 1.223211 CGTGGGCCCATATGTCACA 59.777 57.895 31.45 0.00 0.00 3.58
5644 6292 1.095228 CGTGGGCCCATATGTCACAC 61.095 60.000 31.45 10.79 0.00 3.82
5645 6293 0.034574 GTGGGCCCATATGTCACACA 60.035 55.000 31.45 0.00 0.00 3.72
5646 6294 0.034574 TGGGCCCATATGTCACACAC 60.035 55.000 24.45 0.00 0.00 3.82
5647 6295 0.751643 GGGCCCATATGTCACACACC 60.752 60.000 19.95 0.00 0.00 4.16
5648 6296 1.095228 GGCCCATATGTCACACACCG 61.095 60.000 1.24 0.00 0.00 4.94
5649 6297 1.714899 GCCCATATGTCACACACCGC 61.715 60.000 1.24 0.00 0.00 5.68
5650 6298 1.095228 CCCATATGTCACACACCGCC 61.095 60.000 1.24 0.00 0.00 6.13
5651 6299 0.107703 CCATATGTCACACACCGCCT 60.108 55.000 1.24 0.00 0.00 5.52
5652 6300 1.678728 CCATATGTCACACACCGCCTT 60.679 52.381 1.24 0.00 0.00 4.35
5653 6301 1.665679 CATATGTCACACACCGCCTTC 59.334 52.381 0.00 0.00 0.00 3.46
5654 6302 0.036765 TATGTCACACACCGCCTTCC 60.037 55.000 0.00 0.00 0.00 3.46
5655 6303 2.668550 GTCACACACCGCCTTCCC 60.669 66.667 0.00 0.00 0.00 3.97
5656 6304 3.164977 TCACACACCGCCTTCCCA 61.165 61.111 0.00 0.00 0.00 4.37
5657 6305 2.034066 CACACACCGCCTTCCCAT 59.966 61.111 0.00 0.00 0.00 4.00
5658 6306 2.040544 CACACACCGCCTTCCCATC 61.041 63.158 0.00 0.00 0.00 3.51
5659 6307 2.438434 CACACCGCCTTCCCATCC 60.438 66.667 0.00 0.00 0.00 3.51
5660 6308 4.096003 ACACCGCCTTCCCATCCG 62.096 66.667 0.00 0.00 0.00 4.18
5661 6309 4.096003 CACCGCCTTCCCATCCGT 62.096 66.667 0.00 0.00 0.00 4.69
5662 6310 3.782443 ACCGCCTTCCCATCCGTC 61.782 66.667 0.00 0.00 0.00 4.79
5663 6311 3.781307 CCGCCTTCCCATCCGTCA 61.781 66.667 0.00 0.00 0.00 4.35
5664 6312 2.505982 CGCCTTCCCATCCGTCAT 59.494 61.111 0.00 0.00 0.00 3.06
5665 6313 1.595382 CGCCTTCCCATCCGTCATC 60.595 63.158 0.00 0.00 0.00 2.92
5666 6314 1.595382 GCCTTCCCATCCGTCATCG 60.595 63.158 0.00 0.00 0.00 3.84
5667 6315 1.595382 CCTTCCCATCCGTCATCGC 60.595 63.158 0.00 0.00 35.54 4.58
5668 6316 1.595382 CTTCCCATCCGTCATCGCC 60.595 63.158 0.00 0.00 35.54 5.54
5669 6317 3.439513 TTCCCATCCGTCATCGCCG 62.440 63.158 0.00 0.00 35.54 6.46
5670 6318 4.221422 CCCATCCGTCATCGCCGT 62.221 66.667 0.00 0.00 35.54 5.68
5671 6319 2.202878 CCATCCGTCATCGCCGTT 60.203 61.111 0.00 0.00 35.54 4.44
5672 6320 2.525248 CCATCCGTCATCGCCGTTG 61.525 63.158 0.00 0.00 35.54 4.10
5673 6321 1.518352 CATCCGTCATCGCCGTTGA 60.518 57.895 0.00 0.00 35.54 3.18
5674 6322 1.518572 ATCCGTCATCGCCGTTGAC 60.519 57.895 16.32 16.32 40.06 3.18
5675 6323 1.945354 ATCCGTCATCGCCGTTGACT 61.945 55.000 21.81 5.04 41.05 3.41
5676 6324 1.138036 CCGTCATCGCCGTTGACTA 59.862 57.895 21.81 0.00 41.05 2.59
5677 6325 0.866061 CCGTCATCGCCGTTGACTAG 60.866 60.000 21.81 11.99 41.05 2.57
5678 6326 1.472276 CGTCATCGCCGTTGACTAGC 61.472 60.000 21.81 1.08 41.05 3.42
5687 6335 4.789075 TTGACTAGCGCCGCCGTC 62.789 66.667 18.57 18.57 36.67 4.79
5699 6347 4.200283 GCCGTCCGCCAGAGAGAG 62.200 72.222 0.00 0.00 0.00 3.20
5700 6348 2.438614 CCGTCCGCCAGAGAGAGA 60.439 66.667 0.00 0.00 0.00 3.10
5701 6349 2.477176 CCGTCCGCCAGAGAGAGAG 61.477 68.421 0.00 0.00 0.00 3.20
5702 6350 2.477176 CGTCCGCCAGAGAGAGAGG 61.477 68.421 0.00 0.00 0.00 3.69
5703 6351 2.441164 TCCGCCAGAGAGAGAGGC 60.441 66.667 0.00 0.00 44.89 4.70
5707 6355 3.953300 CCAGAGAGAGAGGCAGGG 58.047 66.667 0.00 0.00 0.00 4.45
5708 6356 1.001503 CCAGAGAGAGAGGCAGGGT 59.998 63.158 0.00 0.00 0.00 4.34
5709 6357 1.329171 CCAGAGAGAGAGGCAGGGTG 61.329 65.000 0.00 0.00 0.00 4.61
5710 6358 0.614415 CAGAGAGAGAGGCAGGGTGT 60.614 60.000 0.00 0.00 0.00 4.16
5711 6359 0.324275 AGAGAGAGAGGCAGGGTGTC 60.324 60.000 0.00 0.00 0.00 3.67
5712 6360 0.613292 GAGAGAGAGGCAGGGTGTCA 60.613 60.000 0.00 0.00 0.00 3.58
5713 6361 0.042431 AGAGAGAGGCAGGGTGTCAT 59.958 55.000 0.00 0.00 0.00 3.06
5714 6362 1.289231 AGAGAGAGGCAGGGTGTCATA 59.711 52.381 0.00 0.00 0.00 2.15
5715 6363 1.410882 GAGAGAGGCAGGGTGTCATAC 59.589 57.143 0.00 0.00 0.00 2.39
5716 6364 1.195115 GAGAGGCAGGGTGTCATACA 58.805 55.000 0.00 0.00 0.00 2.29
5717 6365 1.555075 GAGAGGCAGGGTGTCATACAA 59.445 52.381 0.00 0.00 0.00 2.41
5718 6366 1.556911 AGAGGCAGGGTGTCATACAAG 59.443 52.381 0.00 0.00 0.00 3.16
5719 6367 1.555075 GAGGCAGGGTGTCATACAAGA 59.445 52.381 0.00 0.00 0.00 3.02
5720 6368 1.279271 AGGCAGGGTGTCATACAAGAC 59.721 52.381 0.00 0.00 38.99 3.01
5721 6369 1.279271 GGCAGGGTGTCATACAAGACT 59.721 52.381 0.00 0.00 39.27 3.24
5722 6370 2.290323 GGCAGGGTGTCATACAAGACTT 60.290 50.000 0.00 0.00 39.27 3.01
5723 6371 3.003480 GCAGGGTGTCATACAAGACTTC 58.997 50.000 0.00 0.00 39.27 3.01
5724 6372 3.557054 GCAGGGTGTCATACAAGACTTCA 60.557 47.826 0.00 0.00 39.27 3.02
5725 6373 4.836825 CAGGGTGTCATACAAGACTTCAT 58.163 43.478 0.00 0.00 39.27 2.57
5726 6374 5.248640 CAGGGTGTCATACAAGACTTCATT 58.751 41.667 0.00 0.00 39.27 2.57
5727 6375 5.707298 CAGGGTGTCATACAAGACTTCATTT 59.293 40.000 0.00 0.00 39.27 2.32
5728 6376 6.878923 CAGGGTGTCATACAAGACTTCATTTA 59.121 38.462 0.00 0.00 39.27 1.40
5729 6377 7.554118 CAGGGTGTCATACAAGACTTCATTTAT 59.446 37.037 0.00 0.00 39.27 1.40
5730 6378 7.770897 AGGGTGTCATACAAGACTTCATTTATC 59.229 37.037 0.00 0.00 39.27 1.75
5731 6379 7.770897 GGGTGTCATACAAGACTTCATTTATCT 59.229 37.037 0.00 0.00 39.27 1.98
5732 6380 9.817809 GGTGTCATACAAGACTTCATTTATCTA 57.182 33.333 0.00 0.00 39.27 1.98
5743 6391 9.084533 AGACTTCATTTATCTAGATGTAGACCC 57.915 37.037 15.79 0.00 38.14 4.46
5744 6392 8.783660 ACTTCATTTATCTAGATGTAGACCCA 57.216 34.615 15.79 0.00 38.14 4.51
5745 6393 9.386122 ACTTCATTTATCTAGATGTAGACCCAT 57.614 33.333 15.79 0.00 38.14 4.00
5751 6399 8.677148 TTATCTAGATGTAGACCCATTTTTGC 57.323 34.615 15.79 0.00 38.14 3.68
5752 6400 5.437060 TCTAGATGTAGACCCATTTTTGCC 58.563 41.667 0.00 0.00 29.69 4.52
5753 6401 4.322057 AGATGTAGACCCATTTTTGCCT 57.678 40.909 0.00 0.00 0.00 4.75
5754 6402 4.677182 AGATGTAGACCCATTTTTGCCTT 58.323 39.130 0.00 0.00 0.00 4.35
5755 6403 4.463891 AGATGTAGACCCATTTTTGCCTTG 59.536 41.667 0.00 0.00 0.00 3.61
5756 6404 2.896685 TGTAGACCCATTTTTGCCTTGG 59.103 45.455 0.00 0.00 0.00 3.61
5759 6407 2.462301 CCCATTTTTGCCTTGGGGT 58.538 52.632 0.00 0.00 45.37 4.95
5760 6408 0.036590 CCCATTTTTGCCTTGGGGTG 59.963 55.000 0.00 0.00 45.37 4.61
5761 6409 0.606130 CCATTTTTGCCTTGGGGTGC 60.606 55.000 0.00 0.00 34.45 5.01
5762 6410 0.950071 CATTTTTGCCTTGGGGTGCG 60.950 55.000 0.00 0.00 34.45 5.34
5763 6411 1.406860 ATTTTTGCCTTGGGGTGCGT 61.407 50.000 0.00 0.00 34.45 5.24
5764 6412 1.617947 TTTTTGCCTTGGGGTGCGTT 61.618 50.000 0.00 0.00 34.45 4.84
5765 6413 0.755698 TTTTGCCTTGGGGTGCGTTA 60.756 50.000 0.00 0.00 34.45 3.18
5766 6414 0.540830 TTTGCCTTGGGGTGCGTTAT 60.541 50.000 0.00 0.00 34.45 1.89
5767 6415 1.247419 TTGCCTTGGGGTGCGTTATG 61.247 55.000 0.00 0.00 34.45 1.90
5768 6416 1.677633 GCCTTGGGGTGCGTTATGT 60.678 57.895 0.00 0.00 34.45 2.29
5769 6417 1.248101 GCCTTGGGGTGCGTTATGTT 61.248 55.000 0.00 0.00 34.45 2.71
5770 6418 1.951424 GCCTTGGGGTGCGTTATGTTA 60.951 52.381 0.00 0.00 34.45 2.41
5771 6419 1.741145 CCTTGGGGTGCGTTATGTTAC 59.259 52.381 0.00 0.00 0.00 2.50
5772 6420 1.395608 CTTGGGGTGCGTTATGTTACG 59.604 52.381 0.00 0.00 44.09 3.18
5773 6421 0.391395 TGGGGTGCGTTATGTTACGG 60.391 55.000 0.00 0.00 41.65 4.02
5774 6422 0.391528 GGGGTGCGTTATGTTACGGT 60.392 55.000 0.00 0.00 41.65 4.83
5775 6423 1.134848 GGGGTGCGTTATGTTACGGTA 60.135 52.381 0.00 0.00 41.65 4.02
5776 6424 2.615869 GGGTGCGTTATGTTACGGTAA 58.384 47.619 0.00 0.00 41.65 2.85
5777 6425 3.197265 GGGTGCGTTATGTTACGGTAAT 58.803 45.455 3.59 0.00 41.65 1.89
5778 6426 4.367450 GGGTGCGTTATGTTACGGTAATA 58.633 43.478 3.59 1.55 41.65 0.98
5779 6427 4.990426 GGGTGCGTTATGTTACGGTAATAT 59.010 41.667 13.54 13.54 41.65 1.28
5780 6428 6.155827 GGGTGCGTTATGTTACGGTAATATA 58.844 40.000 11.79 11.79 41.65 0.86
5781 6429 6.813152 GGGTGCGTTATGTTACGGTAATATAT 59.187 38.462 15.27 8.56 41.65 0.86
5782 6430 7.331687 GGGTGCGTTATGTTACGGTAATATATT 59.668 37.037 15.27 2.97 41.65 1.28
5783 6431 9.352784 GGTGCGTTATGTTACGGTAATATATTA 57.647 33.333 15.27 0.81 41.65 0.98
5806 6454 6.889301 ATGTCATCACAAACATCTGTTTCT 57.111 33.333 5.35 0.00 45.54 2.52
5807 6455 6.304356 TGTCATCACAAACATCTGTTTCTC 57.696 37.500 5.35 0.00 45.54 2.87
5808 6456 5.239306 TGTCATCACAAACATCTGTTTCTCC 59.761 40.000 5.35 0.00 45.54 3.71
5809 6457 5.239306 GTCATCACAAACATCTGTTTCTCCA 59.761 40.000 5.35 0.00 45.54 3.86
5810 6458 6.005823 TCATCACAAACATCTGTTTCTCCAT 58.994 36.000 5.35 0.00 45.54 3.41
5811 6459 6.491062 TCATCACAAACATCTGTTTCTCCATT 59.509 34.615 5.35 0.00 45.54 3.16
5812 6460 7.665145 TCATCACAAACATCTGTTTCTCCATTA 59.335 33.333 5.35 0.00 45.54 1.90
5813 6461 7.815840 TCACAAACATCTGTTTCTCCATTAA 57.184 32.000 5.35 0.00 45.54 1.40
5814 6462 7.648142 TCACAAACATCTGTTTCTCCATTAAC 58.352 34.615 5.35 0.00 45.54 2.01
5815 6463 7.502226 TCACAAACATCTGTTTCTCCATTAACT 59.498 33.333 5.35 0.00 45.54 2.24
5816 6464 8.783093 CACAAACATCTGTTTCTCCATTAACTA 58.217 33.333 5.35 0.00 45.54 2.24
5817 6465 9.520515 ACAAACATCTGTTTCTCCATTAACTAT 57.479 29.630 5.35 0.00 45.54 2.12
5821 6469 9.520515 ACATCTGTTTCTCCATTAACTATTTGT 57.479 29.630 0.00 0.00 0.00 2.83
5822 6470 9.994432 CATCTGTTTCTCCATTAACTATTTGTC 57.006 33.333 0.00 0.00 0.00 3.18
5823 6471 9.739276 ATCTGTTTCTCCATTAACTATTTGTCA 57.261 29.630 0.00 0.00 0.00 3.58
5824 6472 8.999431 TCTGTTTCTCCATTAACTATTTGTCAC 58.001 33.333 0.00 0.00 0.00 3.67
5825 6473 8.684386 TGTTTCTCCATTAACTATTTGTCACA 57.316 30.769 0.00 0.00 0.00 3.58
5826 6474 9.295825 TGTTTCTCCATTAACTATTTGTCACAT 57.704 29.630 0.00 0.00 0.00 3.21
5830 6478 9.109393 TCTCCATTAACTATTTGTCACATAAGC 57.891 33.333 0.00 0.00 0.00 3.09
5831 6479 8.800370 TCCATTAACTATTTGTCACATAAGCA 57.200 30.769 0.00 0.00 0.00 3.91
5832 6480 9.237187 TCCATTAACTATTTGTCACATAAGCAA 57.763 29.630 0.00 0.00 0.00 3.91
5833 6481 9.853555 CCATTAACTATTTGTCACATAAGCAAA 57.146 29.630 0.00 0.00 36.68 3.68
5852 6500 5.133707 CAAATTTGCCTTGATATGCGTTG 57.866 39.130 5.01 0.00 0.00 4.10
5853 6501 4.454728 AATTTGCCTTGATATGCGTTGT 57.545 36.364 0.00 0.00 0.00 3.32
5854 6502 2.917701 TTGCCTTGATATGCGTTGTG 57.082 45.000 0.00 0.00 0.00 3.33
5855 6503 1.819928 TGCCTTGATATGCGTTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
5856 6504 2.158559 TGCCTTGATATGCGTTGTGTT 58.841 42.857 0.00 0.00 0.00 3.32
5857 6505 2.556189 TGCCTTGATATGCGTTGTGTTT 59.444 40.909 0.00 0.00 0.00 2.83
5858 6506 3.005261 TGCCTTGATATGCGTTGTGTTTT 59.995 39.130 0.00 0.00 0.00 2.43
5859 6507 3.987220 GCCTTGATATGCGTTGTGTTTTT 59.013 39.130 0.00 0.00 0.00 1.94
5930 6578 7.545362 CAGTATGTGGAAGAATAAAGTCAGG 57.455 40.000 0.00 0.00 0.00 3.86
5931 6579 6.540189 CAGTATGTGGAAGAATAAAGTCAGGG 59.460 42.308 0.00 0.00 0.00 4.45
5932 6580 4.301072 TGTGGAAGAATAAAGTCAGGGG 57.699 45.455 0.00 0.00 0.00 4.79
5933 6581 3.010138 TGTGGAAGAATAAAGTCAGGGGG 59.990 47.826 0.00 0.00 0.00 5.40
5934 6582 3.265995 GTGGAAGAATAAAGTCAGGGGGA 59.734 47.826 0.00 0.00 0.00 4.81
5935 6583 4.079730 GTGGAAGAATAAAGTCAGGGGGAT 60.080 45.833 0.00 0.00 0.00 3.85
5936 6584 4.544152 TGGAAGAATAAAGTCAGGGGGATT 59.456 41.667 0.00 0.00 0.00 3.01
5937 6585 4.889995 GGAAGAATAAAGTCAGGGGGATTG 59.110 45.833 0.00 0.00 0.00 2.67
5938 6586 4.526438 AGAATAAAGTCAGGGGGATTGG 57.474 45.455 0.00 0.00 0.00 3.16
5939 6587 4.119155 AGAATAAAGTCAGGGGGATTGGA 58.881 43.478 0.00 0.00 0.00 3.53
5940 6588 4.166919 AGAATAAAGTCAGGGGGATTGGAG 59.833 45.833 0.00 0.00 0.00 3.86
5941 6589 1.760405 AAAGTCAGGGGGATTGGAGT 58.240 50.000 0.00 0.00 0.00 3.85
5942 6590 1.290134 AAGTCAGGGGGATTGGAGTC 58.710 55.000 0.00 0.00 0.00 3.36
5943 6591 0.621862 AGTCAGGGGGATTGGAGTCC 60.622 60.000 0.73 0.73 37.56 3.85
5959 6607 6.834168 TGGAGTCCCAAAATTCAGATAAAC 57.166 37.500 6.74 0.00 40.09 2.01
5960 6608 5.714806 TGGAGTCCCAAAATTCAGATAAACC 59.285 40.000 6.74 0.00 40.09 3.27
5961 6609 5.714806 GGAGTCCCAAAATTCAGATAAACCA 59.285 40.000 0.00 0.00 0.00 3.67
5962 6610 6.210584 GGAGTCCCAAAATTCAGATAAACCAA 59.789 38.462 0.00 0.00 0.00 3.67
5963 6611 7.232118 AGTCCCAAAATTCAGATAAACCAAG 57.768 36.000 0.00 0.00 0.00 3.61
5964 6612 6.211384 AGTCCCAAAATTCAGATAAACCAAGG 59.789 38.462 0.00 0.00 0.00 3.61
5965 6613 5.046663 TCCCAAAATTCAGATAAACCAAGGC 60.047 40.000 0.00 0.00 0.00 4.35
5966 6614 5.046376 CCCAAAATTCAGATAAACCAAGGCT 60.046 40.000 0.00 0.00 0.00 4.58
5967 6615 6.154363 CCCAAAATTCAGATAAACCAAGGCTA 59.846 38.462 0.00 0.00 0.00 3.93
5968 6616 7.310361 CCCAAAATTCAGATAAACCAAGGCTAA 60.310 37.037 0.00 0.00 0.00 3.09
5969 6617 8.093927 CCAAAATTCAGATAAACCAAGGCTAAA 58.906 33.333 0.00 0.00 0.00 1.85
5970 6618 9.143631 CAAAATTCAGATAAACCAAGGCTAAAG 57.856 33.333 0.00 0.00 0.00 1.85
5971 6619 5.897377 TTCAGATAAACCAAGGCTAAAGC 57.103 39.130 0.00 0.00 41.14 3.51
5972 6620 4.917385 TCAGATAAACCAAGGCTAAAGCA 58.083 39.130 4.07 0.00 44.36 3.91
5973 6621 4.943705 TCAGATAAACCAAGGCTAAAGCAG 59.056 41.667 4.07 0.00 44.36 4.24
5974 6622 4.702131 CAGATAAACCAAGGCTAAAGCAGT 59.298 41.667 4.07 0.00 44.36 4.40
5975 6623 4.702131 AGATAAACCAAGGCTAAAGCAGTG 59.298 41.667 4.07 1.05 44.36 3.66
5976 6624 0.961753 AACCAAGGCTAAAGCAGTGC 59.038 50.000 7.13 7.13 44.36 4.40
5977 6625 0.111253 ACCAAGGCTAAAGCAGTGCT 59.889 50.000 13.14 13.14 44.36 4.40
5991 6639 3.641648 GCAGTGCTTTGCTAAACAATCA 58.358 40.909 8.18 0.00 40.89 2.57
5992 6640 3.671928 GCAGTGCTTTGCTAAACAATCAG 59.328 43.478 8.18 0.00 40.89 2.90
5993 6641 3.671928 CAGTGCTTTGCTAAACAATCAGC 59.328 43.478 0.00 0.00 40.88 4.26
5994 6642 3.318839 AGTGCTTTGCTAAACAATCAGCA 59.681 39.130 1.69 1.69 45.47 4.41
6001 6649 5.710513 TGCTAAACAATCAGCAACAAGAT 57.289 34.783 0.00 0.00 44.49 2.40
6002 6650 6.088016 TGCTAAACAATCAGCAACAAGATT 57.912 33.333 0.00 0.00 44.49 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 1.734465 GCGAAAATCTACAGCAGTGCT 59.266 47.619 13.14 13.14 40.77 4.40
247 249 2.005370 AGTAACTTCTCCGTCCCACA 57.995 50.000 0.00 0.00 0.00 4.17
279 342 3.390967 ACCCCACCCAAGAAATTCTTTTG 59.609 43.478 5.36 3.98 33.78 2.44
280 343 3.664320 ACCCCACCCAAGAAATTCTTTT 58.336 40.909 5.36 0.00 33.78 2.27
299 362 4.708726 TCAAAGTCTACTAACCGCTACC 57.291 45.455 0.00 0.00 0.00 3.18
308 371 9.131791 TGTATCATACTGCATCAAAGTCTACTA 57.868 33.333 0.00 0.00 0.00 1.82
354 420 6.936335 TCTACTGTTTCATTCATCTTTGCAGA 59.064 34.615 0.00 0.00 0.00 4.26
370 436 6.714810 TGGTTATGATTGCAACTCTACTGTTT 59.285 34.615 0.00 0.00 0.00 2.83
467 533 1.160137 GAGTCAAATGGAAGCACGCT 58.840 50.000 0.00 0.00 0.00 5.07
468 534 1.135859 CAGAGTCAAATGGAAGCACGC 60.136 52.381 0.00 0.00 0.00 5.34
469 535 2.146342 ACAGAGTCAAATGGAAGCACG 58.854 47.619 0.00 0.00 0.00 5.34
645 761 7.221645 GGTAGTAGTAAAAATCTAGTTGTCGGC 59.778 40.741 0.00 0.00 0.00 5.54
669 791 5.308825 CCACTAACATTTTGAGACAGAGGT 58.691 41.667 0.00 0.00 0.00 3.85
671 793 4.154918 GCCCACTAACATTTTGAGACAGAG 59.845 45.833 0.00 0.00 0.00 3.35
700 822 5.013704 TCCCTCTGTCTTAAAATGTAAGGCA 59.986 40.000 0.00 0.00 36.88 4.75
702 824 6.712276 ACTCCCTCTGTCTTAAAATGTAAGG 58.288 40.000 0.00 0.00 0.00 2.69
763 935 2.288640 ACTACACCCTGTTCGCAGTTAC 60.289 50.000 0.00 0.00 43.51 2.50
764 936 1.965643 ACTACACCCTGTTCGCAGTTA 59.034 47.619 0.00 0.00 43.51 2.24
769 941 4.743644 GTGATAATACTACACCCTGTTCGC 59.256 45.833 0.00 0.00 0.00 4.70
789 1162 3.630312 GGTAAGGTTCAAAGCTTGTGTGA 59.370 43.478 15.49 0.00 45.43 3.58
815 1188 0.312102 GTCAAAAGGCAGTGCTGGTC 59.688 55.000 16.11 0.00 0.00 4.02
817 1190 1.035139 AAGTCAAAAGGCAGTGCTGG 58.965 50.000 16.11 0.53 0.00 4.85
918 1291 1.904032 GAGCCTCTGACCCTGAAGG 59.096 63.158 0.00 0.00 43.78 3.46
919 1292 1.515020 CGAGCCTCTGACCCTGAAG 59.485 63.158 0.00 0.00 0.00 3.02
920 1293 1.984570 CCGAGCCTCTGACCCTGAA 60.985 63.158 0.00 0.00 0.00 3.02
921 1294 2.363018 CCGAGCCTCTGACCCTGA 60.363 66.667 0.00 0.00 0.00 3.86
922 1295 2.363018 TCCGAGCCTCTGACCCTG 60.363 66.667 0.00 0.00 0.00 4.45
923 1296 2.363147 GTCCGAGCCTCTGACCCT 60.363 66.667 5.06 0.00 0.00 4.34
924 1297 2.680352 TGTCCGAGCCTCTGACCC 60.680 66.667 12.90 0.00 30.82 4.46
925 1298 1.816863 TTGTGTCCGAGCCTCTGACC 61.817 60.000 12.90 5.98 30.82 4.02
1351 1760 1.302993 GGCGCAGGGTAAAGTGGAA 60.303 57.895 10.83 0.00 0.00 3.53
1354 1763 3.124921 CGGGCGCAGGGTAAAGTG 61.125 66.667 10.83 0.00 0.00 3.16
1370 1779 0.951040 AGAAGTTTCAGCTTCGGCCG 60.951 55.000 22.12 22.12 46.82 6.13
1380 1789 5.076873 CAAATCCTAACCCCAGAAGTTTCA 58.923 41.667 0.00 0.00 0.00 2.69
1386 1795 3.055385 CGTCTCAAATCCTAACCCCAGAA 60.055 47.826 0.00 0.00 0.00 3.02
1404 1813 4.246458 GCAACTAATTTCTCAGTCCGTCT 58.754 43.478 0.00 0.00 0.00 4.18
1494 1916 2.440409 CCCCAATCAGTTCACTCCAAG 58.560 52.381 0.00 0.00 0.00 3.61
1507 1929 4.346730 TCATATTCATCCATGCCCCAATC 58.653 43.478 0.00 0.00 0.00 2.67
1515 1937 7.463780 CGAAGCTCGTATTCATATTCATCCATG 60.464 40.741 0.00 0.00 34.72 3.66
1518 1940 6.093404 TCGAAGCTCGTATTCATATTCATCC 58.907 40.000 0.00 0.00 41.35 3.51
1527 1949 4.804139 GGAAATCTTCGAAGCTCGTATTCA 59.196 41.667 20.56 0.00 41.35 2.57
1528 1950 5.044558 AGGAAATCTTCGAAGCTCGTATTC 58.955 41.667 20.56 15.18 41.35 1.75
1529 1951 5.012328 AGGAAATCTTCGAAGCTCGTATT 57.988 39.130 20.56 11.29 41.35 1.89
1530 1952 4.098044 TGAGGAAATCTTCGAAGCTCGTAT 59.902 41.667 20.56 5.39 41.35 3.06
1531 1953 3.442625 TGAGGAAATCTTCGAAGCTCGTA 59.557 43.478 20.56 2.93 41.35 3.43
1532 1954 2.231478 TGAGGAAATCTTCGAAGCTCGT 59.769 45.455 20.56 16.17 41.35 4.18
1569 1991 2.360801 CACGGAAAATGAACACCAAGGT 59.639 45.455 0.00 0.00 0.00 3.50
1574 1996 1.066303 TGCACACGGAAAATGAACACC 59.934 47.619 0.00 0.00 0.00 4.16
1602 2032 1.228644 TGCAGGCTTGTTGATGGCT 60.229 52.632 0.00 0.00 39.75 4.75
1647 2077 3.934391 GACGTTGTCCGCCTCTGGG 62.934 68.421 0.00 0.00 41.42 4.45
1716 2146 2.269241 GCTCCGAGTTCCCAAGGG 59.731 66.667 0.00 0.00 0.00 3.95
1823 2253 3.004315 CGCCCAATTCCACATTACCATAC 59.996 47.826 0.00 0.00 0.00 2.39
1834 2264 0.916086 ACTACCATCGCCCAATTCCA 59.084 50.000 0.00 0.00 0.00 3.53
1875 2305 6.816640 TGTCTAAACTATTGATGTGGTACAGC 59.183 38.462 0.00 0.00 41.80 4.40
1885 2315 8.321353 TGAGTCACCAATGTCTAAACTATTGAT 58.679 33.333 0.00 0.00 34.55 2.57
1901 2331 1.550524 CGAGGAAGGATGAGTCACCAA 59.449 52.381 12.45 0.00 0.00 3.67
1922 2352 5.349817 CACTCAGTACAAAAGGTATGCTCTG 59.650 44.000 0.00 0.00 33.76 3.35
1923 2353 5.012148 ACACTCAGTACAAAAGGTATGCTCT 59.988 40.000 0.00 0.00 33.76 4.09
2040 2652 5.640147 AGGATGTTATCACAACCCTTCAAA 58.360 37.500 2.90 0.00 45.18 2.69
2109 2721 5.797051 TCGATATGCATGATCAGAATTCCA 58.203 37.500 10.16 0.00 0.00 3.53
2142 2754 1.382420 CCACAGAGGGGCTAGAGCT 60.382 63.158 0.81 0.00 41.70 4.09
2303 2915 6.513806 TGCTTTCACAATGCATAATACAGT 57.486 33.333 0.00 0.00 36.74 3.55
2395 3007 4.108501 TGTGTCTTAGACCTACCTGTCA 57.891 45.455 10.10 0.00 37.73 3.58
2652 3264 3.006323 AGTCACATACAGCATAGCTAGCC 59.994 47.826 12.13 0.00 36.40 3.93
2873 3485 5.506708 AGACTGTTCCAGTACTTTGGTTTT 58.493 37.500 0.00 0.00 45.44 2.43
3153 3765 3.775316 AGTTTATACCAGTCCCCTGTCAG 59.225 47.826 0.00 0.00 36.95 3.51
3180 3792 6.632171 AAAGTTTTGAGCGCATTATTAAGC 57.368 33.333 11.47 0.00 0.00 3.09
3209 3821 9.201127 AGAAGAACAAGTAAAAGATTACGTACC 57.799 33.333 0.00 0.00 44.97 3.34
3251 3863 4.261801 GGAGAACTGCTGCTGGTTTATTA 58.738 43.478 11.29 0.00 31.32 0.98
3548 4160 5.754890 GGTAAGTTGGTTCAACGAACTCTTA 59.245 40.000 17.24 5.71 44.54 2.10
3700 4312 7.846107 GTGTGTATCTTTGCAAGTATGTTATCG 59.154 37.037 0.00 0.00 0.00 2.92
3999 4611 3.887621 AGCCAGTAAGTTCTAATGCGA 57.112 42.857 0.00 0.00 0.00 5.10
4171 4783 6.793349 TCCATACTAGCTTTCGAACTTCTAC 58.207 40.000 0.00 0.00 0.00 2.59
4174 4786 6.363896 GCTATCCATACTAGCTTTCGAACTTC 59.636 42.308 0.00 0.00 38.82 3.01
4263 4875 5.682234 TTGCAGAGAAGGACAAGATCATA 57.318 39.130 0.00 0.00 0.00 2.15
4466 5085 4.081420 ACAATATCAGCGTTTCTCCAGTCT 60.081 41.667 0.00 0.00 0.00 3.24
4736 5355 5.067273 TCCACATTTCGTCCAATTGTAGTT 58.933 37.500 4.43 0.00 29.28 2.24
4839 5458 4.849813 TCCACATCTTTGATGATCTGGT 57.150 40.909 13.63 0.00 35.12 4.00
4895 5514 8.842358 AGAAAAACATCGAGATTACCAGTAAA 57.158 30.769 0.00 0.00 0.00 2.01
5057 5676 5.148502 TCCGGCTTCTTCTTTCCTATAGAT 58.851 41.667 0.00 0.00 0.00 1.98
5062 5681 1.207329 GCTCCGGCTTCTTCTTTCCTA 59.793 52.381 0.00 0.00 35.22 2.94
5165 5807 8.964476 ACACCTATAGGAATTGAACATAACAG 57.036 34.615 26.01 0.00 38.94 3.16
5215 5857 5.876357 ACTAGGGAAAACAATACAAGAGCA 58.124 37.500 0.00 0.00 0.00 4.26
5262 5906 8.364894 TCCGTATGCTAGTTAATCACATACAAT 58.635 33.333 15.27 0.00 41.92 2.71
5338 5986 7.329717 GTGTGACCAAAAACTTGAAAACACATA 59.670 33.333 0.00 0.00 37.01 2.29
5341 5989 5.463724 TGTGTGACCAAAAACTTGAAAACAC 59.536 36.000 0.00 0.00 35.82 3.32
5342 5990 5.601662 TGTGTGACCAAAAACTTGAAAACA 58.398 33.333 0.00 0.00 0.00 2.83
5345 5993 5.872070 GGATTGTGTGACCAAAAACTTGAAA 59.128 36.000 0.00 0.00 0.00 2.69
5348 5996 4.119136 GGGATTGTGTGACCAAAAACTTG 58.881 43.478 0.00 0.00 0.00 3.16
5349 5997 4.030216 AGGGATTGTGTGACCAAAAACTT 58.970 39.130 0.00 0.00 0.00 2.66
5350 5998 3.384467 CAGGGATTGTGTGACCAAAAACT 59.616 43.478 0.00 0.00 0.00 2.66
5351 5999 3.132111 ACAGGGATTGTGTGACCAAAAAC 59.868 43.478 0.00 0.00 38.99 2.43
5352 6000 3.370104 ACAGGGATTGTGTGACCAAAAA 58.630 40.909 0.00 0.00 38.99 1.94
5353 6001 3.025322 ACAGGGATTGTGTGACCAAAA 57.975 42.857 0.00 0.00 38.99 2.44
5354 6002 2.746279 ACAGGGATTGTGTGACCAAA 57.254 45.000 0.00 0.00 38.99 3.28
5355 6003 2.552155 GCTACAGGGATTGTGTGACCAA 60.552 50.000 0.00 0.00 41.10 3.67
5356 6004 1.003118 GCTACAGGGATTGTGTGACCA 59.997 52.381 0.00 0.00 41.10 4.02
5357 6005 1.003118 TGCTACAGGGATTGTGTGACC 59.997 52.381 0.00 0.00 41.10 4.02
5358 6006 2.076863 GTGCTACAGGGATTGTGTGAC 58.923 52.381 0.00 0.00 41.10 3.67
5359 6007 1.696884 TGTGCTACAGGGATTGTGTGA 59.303 47.619 0.00 0.00 41.10 3.58
5360 6008 2.183478 TGTGCTACAGGGATTGTGTG 57.817 50.000 0.00 0.00 41.10 3.82
5361 6009 2.504367 GTTGTGCTACAGGGATTGTGT 58.496 47.619 0.00 0.00 41.10 3.72
5362 6010 1.812571 GGTTGTGCTACAGGGATTGTG 59.187 52.381 0.00 0.00 41.10 3.33
5363 6011 1.610624 CGGTTGTGCTACAGGGATTGT 60.611 52.381 0.00 0.00 43.96 2.71
5364 6012 1.086696 CGGTTGTGCTACAGGGATTG 58.913 55.000 0.00 0.00 0.00 2.67
5365 6013 0.676782 GCGGTTGTGCTACAGGGATT 60.677 55.000 0.00 0.00 0.00 3.01
5366 6014 1.078426 GCGGTTGTGCTACAGGGAT 60.078 57.895 0.00 0.00 0.00 3.85
5367 6015 2.214216 AGCGGTTGTGCTACAGGGA 61.214 57.895 0.00 0.00 45.14 4.20
5368 6016 2.347490 AGCGGTTGTGCTACAGGG 59.653 61.111 0.00 0.00 45.14 4.45
5375 6023 0.880278 TGAAGACAGAGCGGTTGTGC 60.880 55.000 7.07 0.00 0.00 4.57
5376 6024 1.528586 CTTGAAGACAGAGCGGTTGTG 59.471 52.381 7.07 2.32 0.00 3.33
5377 6025 1.139058 ACTTGAAGACAGAGCGGTTGT 59.861 47.619 0.00 0.00 0.00 3.32
5378 6026 1.871080 ACTTGAAGACAGAGCGGTTG 58.129 50.000 0.00 0.00 0.00 3.77
5379 6027 2.622064 AACTTGAAGACAGAGCGGTT 57.378 45.000 0.00 0.00 0.00 4.44
5380 6028 2.622064 AAACTTGAAGACAGAGCGGT 57.378 45.000 0.00 0.00 0.00 5.68
5381 6029 3.971032 AAAAACTTGAAGACAGAGCGG 57.029 42.857 0.00 0.00 0.00 5.52
5400 6048 7.540299 ACTTGTCGTTTAAAGATGTGGAAAAA 58.460 30.769 0.00 0.00 0.00 1.94
5401 6049 7.090953 ACTTGTCGTTTAAAGATGTGGAAAA 57.909 32.000 0.00 0.00 0.00 2.29
5402 6050 6.687081 ACTTGTCGTTTAAAGATGTGGAAA 57.313 33.333 0.00 0.00 0.00 3.13
5403 6051 7.972832 ATACTTGTCGTTTAAAGATGTGGAA 57.027 32.000 0.00 0.00 0.00 3.53
5404 6052 7.972832 AATACTTGTCGTTTAAAGATGTGGA 57.027 32.000 0.00 0.00 0.00 4.02
5405 6053 7.477422 CGAAATACTTGTCGTTTAAAGATGTGG 59.523 37.037 0.00 0.00 32.61 4.17
5406 6054 8.352110 CGAAATACTTGTCGTTTAAAGATGTG 57.648 34.615 0.00 0.00 32.61 3.21
5418 6066 7.686938 GGAGATGTTTTTACGAAATACTTGTCG 59.313 37.037 0.00 0.00 42.91 4.35
5419 6067 8.500773 TGGAGATGTTTTTACGAAATACTTGTC 58.499 33.333 0.00 0.00 0.00 3.18
5420 6068 8.385898 TGGAGATGTTTTTACGAAATACTTGT 57.614 30.769 0.00 0.00 0.00 3.16
5421 6069 9.113876 GTTGGAGATGTTTTTACGAAATACTTG 57.886 33.333 0.00 0.00 0.00 3.16
5422 6070 8.842280 TGTTGGAGATGTTTTTACGAAATACTT 58.158 29.630 0.00 0.00 0.00 2.24
5423 6071 8.385898 TGTTGGAGATGTTTTTACGAAATACT 57.614 30.769 0.00 0.00 0.00 2.12
5424 6072 8.898792 GTTGTTGGAGATGTTTTTACGAAATAC 58.101 33.333 0.00 0.00 0.00 1.89
5425 6073 8.842280 AGTTGTTGGAGATGTTTTTACGAAATA 58.158 29.630 0.00 0.00 0.00 1.40
5426 6074 7.712797 AGTTGTTGGAGATGTTTTTACGAAAT 58.287 30.769 0.00 0.00 0.00 2.17
5427 6075 7.090953 AGTTGTTGGAGATGTTTTTACGAAA 57.909 32.000 0.00 0.00 0.00 3.46
5428 6076 6.687081 AGTTGTTGGAGATGTTTTTACGAA 57.313 33.333 0.00 0.00 0.00 3.85
5429 6077 6.540914 AGAAGTTGTTGGAGATGTTTTTACGA 59.459 34.615 0.00 0.00 0.00 3.43
5430 6078 6.725246 AGAAGTTGTTGGAGATGTTTTTACG 58.275 36.000 0.00 0.00 0.00 3.18
5431 6079 7.931275 AGAGAAGTTGTTGGAGATGTTTTTAC 58.069 34.615 0.00 0.00 0.00 2.01
5432 6080 8.519799 AAGAGAAGTTGTTGGAGATGTTTTTA 57.480 30.769 0.00 0.00 0.00 1.52
5433 6081 7.410120 AAGAGAAGTTGTTGGAGATGTTTTT 57.590 32.000 0.00 0.00 0.00 1.94
5434 6082 7.410120 AAAGAGAAGTTGTTGGAGATGTTTT 57.590 32.000 0.00 0.00 0.00 2.43
5435 6083 6.039829 GGAAAGAGAAGTTGTTGGAGATGTTT 59.960 38.462 0.00 0.00 0.00 2.83
5436 6084 5.532779 GGAAAGAGAAGTTGTTGGAGATGTT 59.467 40.000 0.00 0.00 0.00 2.71
5437 6085 5.066593 GGAAAGAGAAGTTGTTGGAGATGT 58.933 41.667 0.00 0.00 0.00 3.06
5438 6086 5.180868 CAGGAAAGAGAAGTTGTTGGAGATG 59.819 44.000 0.00 0.00 0.00 2.90
5439 6087 5.163152 ACAGGAAAGAGAAGTTGTTGGAGAT 60.163 40.000 0.00 0.00 0.00 2.75
5440 6088 4.164221 ACAGGAAAGAGAAGTTGTTGGAGA 59.836 41.667 0.00 0.00 0.00 3.71
5441 6089 4.455606 ACAGGAAAGAGAAGTTGTTGGAG 58.544 43.478 0.00 0.00 0.00 3.86
5442 6090 4.451900 GACAGGAAAGAGAAGTTGTTGGA 58.548 43.478 0.00 0.00 0.00 3.53
5443 6091 3.565902 GGACAGGAAAGAGAAGTTGTTGG 59.434 47.826 0.00 0.00 0.00 3.77
5444 6092 4.455606 AGGACAGGAAAGAGAAGTTGTTG 58.544 43.478 0.00 0.00 0.00 3.33
5445 6093 4.779993 AGGACAGGAAAGAGAAGTTGTT 57.220 40.909 0.00 0.00 0.00 2.83
5446 6094 4.779993 AAGGACAGGAAAGAGAAGTTGT 57.220 40.909 0.00 0.00 0.00 3.32
5447 6095 5.859495 AGTAAGGACAGGAAAGAGAAGTTG 58.141 41.667 0.00 0.00 0.00 3.16
5448 6096 5.841783 AGAGTAAGGACAGGAAAGAGAAGTT 59.158 40.000 0.00 0.00 0.00 2.66
5449 6097 5.399113 AGAGTAAGGACAGGAAAGAGAAGT 58.601 41.667 0.00 0.00 0.00 3.01
5450 6098 5.993748 AGAGTAAGGACAGGAAAGAGAAG 57.006 43.478 0.00 0.00 0.00 2.85
5451 6099 7.239438 TCTAAGAGTAAGGACAGGAAAGAGAA 58.761 38.462 0.00 0.00 0.00 2.87
5452 6100 6.791371 TCTAAGAGTAAGGACAGGAAAGAGA 58.209 40.000 0.00 0.00 0.00 3.10
5453 6101 7.469537 TTCTAAGAGTAAGGACAGGAAAGAG 57.530 40.000 0.00 0.00 0.00 2.85
5454 6102 8.314751 CAATTCTAAGAGTAAGGACAGGAAAGA 58.685 37.037 0.00 0.00 0.00 2.52
5455 6103 8.314751 TCAATTCTAAGAGTAAGGACAGGAAAG 58.685 37.037 0.00 0.00 0.00 2.62
5456 6104 8.202461 TCAATTCTAAGAGTAAGGACAGGAAA 57.798 34.615 0.00 0.00 0.00 3.13
5457 6105 7.579723 GCTCAATTCTAAGAGTAAGGACAGGAA 60.580 40.741 0.00 0.00 34.39 3.36
5458 6106 6.127310 GCTCAATTCTAAGAGTAAGGACAGGA 60.127 42.308 0.00 0.00 34.39 3.86
5459 6107 6.045955 GCTCAATTCTAAGAGTAAGGACAGG 58.954 44.000 0.00 0.00 34.39 4.00
5460 6108 6.045955 GGCTCAATTCTAAGAGTAAGGACAG 58.954 44.000 0.00 0.00 34.39 3.51
5461 6109 5.483937 TGGCTCAATTCTAAGAGTAAGGACA 59.516 40.000 0.00 0.00 34.39 4.02
5462 6110 5.978814 TGGCTCAATTCTAAGAGTAAGGAC 58.021 41.667 0.00 0.00 34.39 3.85
5463 6111 6.620877 TTGGCTCAATTCTAAGAGTAAGGA 57.379 37.500 0.00 0.00 34.39 3.36
5464 6112 7.687941 TTTTGGCTCAATTCTAAGAGTAAGG 57.312 36.000 0.00 0.00 34.39 2.69
5504 6152 7.120726 ACCAATATTTTACTGGGAAAACGAGAG 59.879 37.037 0.00 0.00 34.31 3.20
5505 6153 6.943718 ACCAATATTTTACTGGGAAAACGAGA 59.056 34.615 0.00 0.00 34.31 4.04
5506 6154 7.027161 CACCAATATTTTACTGGGAAAACGAG 58.973 38.462 0.00 0.00 34.31 4.18
5507 6155 6.715718 TCACCAATATTTTACTGGGAAAACGA 59.284 34.615 0.00 0.00 34.31 3.85
5508 6156 6.915349 TCACCAATATTTTACTGGGAAAACG 58.085 36.000 0.00 0.00 34.31 3.60
5535 6183 1.600485 CTACGTGGAGGTTGCGTTTTT 59.400 47.619 0.00 0.00 39.64 1.94
5536 6184 1.202557 TCTACGTGGAGGTTGCGTTTT 60.203 47.619 0.00 0.00 39.64 2.43
5537 6185 0.390124 TCTACGTGGAGGTTGCGTTT 59.610 50.000 0.00 0.00 39.64 3.60
5538 6186 0.038526 CTCTACGTGGAGGTTGCGTT 60.039 55.000 20.34 0.00 39.64 4.84
5539 6187 0.892358 TCTCTACGTGGAGGTTGCGT 60.892 55.000 26.27 0.00 41.86 5.24
5540 6188 0.179161 CTCTCTACGTGGAGGTTGCG 60.179 60.000 26.27 8.45 34.39 4.85
5541 6189 0.173708 CCTCTCTACGTGGAGGTTGC 59.826 60.000 26.27 0.00 42.86 4.17
5542 6190 0.818296 CCCTCTCTACGTGGAGGTTG 59.182 60.000 26.27 16.74 45.46 3.77
5543 6191 0.324460 CCCCTCTCTACGTGGAGGTT 60.324 60.000 26.27 0.00 45.46 3.50
5544 6192 1.306970 CCCCTCTCTACGTGGAGGT 59.693 63.158 26.27 0.00 45.46 3.85
5545 6193 1.455959 CCCCCTCTCTACGTGGAGG 60.456 68.421 26.27 22.75 46.22 4.30
5546 6194 0.752376 GACCCCCTCTCTACGTGGAG 60.752 65.000 21.86 21.86 34.88 3.86
5547 6195 1.305623 GACCCCCTCTCTACGTGGA 59.694 63.158 0.34 0.34 0.00 4.02
5548 6196 1.000019 TGACCCCCTCTCTACGTGG 60.000 63.158 0.00 0.00 0.00 4.94
5549 6197 1.038130 CCTGACCCCCTCTCTACGTG 61.038 65.000 0.00 0.00 0.00 4.49
5550 6198 1.212934 TCCTGACCCCCTCTCTACGT 61.213 60.000 0.00 0.00 0.00 3.57
5551 6199 0.033405 TTCCTGACCCCCTCTCTACG 60.033 60.000 0.00 0.00 0.00 3.51
5552 6200 1.288335 TCTTCCTGACCCCCTCTCTAC 59.712 57.143 0.00 0.00 0.00 2.59
5553 6201 1.571457 CTCTTCCTGACCCCCTCTCTA 59.429 57.143 0.00 0.00 0.00 2.43
5554 6202 0.338120 CTCTTCCTGACCCCCTCTCT 59.662 60.000 0.00 0.00 0.00 3.10
5555 6203 1.334384 GCTCTTCCTGACCCCCTCTC 61.334 65.000 0.00 0.00 0.00 3.20
5556 6204 1.306568 GCTCTTCCTGACCCCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
5557 6205 1.613630 TGCTCTTCCTGACCCCCTC 60.614 63.158 0.00 0.00 0.00 4.30
5558 6206 1.920835 GTGCTCTTCCTGACCCCCT 60.921 63.158 0.00 0.00 0.00 4.79
5559 6207 1.779061 TTGTGCTCTTCCTGACCCCC 61.779 60.000 0.00 0.00 0.00 5.40
5560 6208 0.606673 GTTGTGCTCTTCCTGACCCC 60.607 60.000 0.00 0.00 0.00 4.95
5561 6209 0.398318 AGTTGTGCTCTTCCTGACCC 59.602 55.000 0.00 0.00 0.00 4.46
5562 6210 1.609320 GGAGTTGTGCTCTTCCTGACC 60.609 57.143 0.00 0.00 43.62 4.02
5563 6211 1.609320 GGGAGTTGTGCTCTTCCTGAC 60.609 57.143 0.00 0.00 43.62 3.51
5564 6212 0.687354 GGGAGTTGTGCTCTTCCTGA 59.313 55.000 0.00 0.00 43.62 3.86
5565 6213 0.689623 AGGGAGTTGTGCTCTTCCTG 59.310 55.000 0.00 0.00 43.62 3.86
5566 6214 0.980423 GAGGGAGTTGTGCTCTTCCT 59.020 55.000 0.00 0.00 43.62 3.36
5567 6215 0.687354 TGAGGGAGTTGTGCTCTTCC 59.313 55.000 0.00 0.00 43.62 3.46
5568 6216 2.289945 ACATGAGGGAGTTGTGCTCTTC 60.290 50.000 0.00 0.00 43.62 2.87
5569 6217 1.701847 ACATGAGGGAGTTGTGCTCTT 59.298 47.619 0.00 0.00 43.62 2.85
5570 6218 1.002888 CACATGAGGGAGTTGTGCTCT 59.997 52.381 0.00 0.00 43.62 4.09
5571 6219 1.002430 TCACATGAGGGAGTTGTGCTC 59.998 52.381 0.00 0.00 40.38 4.26
5572 6220 1.002888 CTCACATGAGGGAGTTGTGCT 59.997 52.381 0.00 0.00 40.38 4.40
5573 6221 1.446907 CTCACATGAGGGAGTTGTGC 58.553 55.000 0.00 0.00 40.38 4.57
5583 6231 0.962356 GGCAACACCCCTCACATGAG 60.962 60.000 0.00 1.63 41.71 2.90
5584 6232 1.074775 GGCAACACCCCTCACATGA 59.925 57.895 0.00 0.00 0.00 3.07
5585 6233 3.685435 GGCAACACCCCTCACATG 58.315 61.111 0.00 0.00 0.00 3.21
5594 6242 1.620822 ATTGTGAGAAGGGCAACACC 58.379 50.000 0.00 0.00 39.74 4.16
5595 6243 2.488153 GGTATTGTGAGAAGGGCAACAC 59.512 50.000 0.00 0.00 39.74 3.32
5596 6244 2.107378 TGGTATTGTGAGAAGGGCAACA 59.893 45.455 0.00 0.00 39.74 3.33
5597 6245 2.488153 GTGGTATTGTGAGAAGGGCAAC 59.512 50.000 0.00 0.00 0.00 4.17
5598 6246 2.554344 GGTGGTATTGTGAGAAGGGCAA 60.554 50.000 0.00 0.00 0.00 4.52
5599 6247 1.004277 GGTGGTATTGTGAGAAGGGCA 59.996 52.381 0.00 0.00 0.00 5.36
5600 6248 1.682087 GGGTGGTATTGTGAGAAGGGC 60.682 57.143 0.00 0.00 0.00 5.19
5601 6249 1.633432 TGGGTGGTATTGTGAGAAGGG 59.367 52.381 0.00 0.00 0.00 3.95
5602 6250 3.433306 TTGGGTGGTATTGTGAGAAGG 57.567 47.619 0.00 0.00 0.00 3.46
5603 6251 3.506067 GGTTTGGGTGGTATTGTGAGAAG 59.494 47.826 0.00 0.00 0.00 2.85
5604 6252 3.492337 GGTTTGGGTGGTATTGTGAGAA 58.508 45.455 0.00 0.00 0.00 2.87
5605 6253 2.551287 CGGTTTGGGTGGTATTGTGAGA 60.551 50.000 0.00 0.00 0.00 3.27
5606 6254 1.810151 CGGTTTGGGTGGTATTGTGAG 59.190 52.381 0.00 0.00 0.00 3.51
5607 6255 1.143277 ACGGTTTGGGTGGTATTGTGA 59.857 47.619 0.00 0.00 0.00 3.58
5608 6256 1.268352 CACGGTTTGGGTGGTATTGTG 59.732 52.381 0.00 0.00 0.00 3.33
5609 6257 1.611519 CACGGTTTGGGTGGTATTGT 58.388 50.000 0.00 0.00 0.00 2.71
5619 6267 1.076339 ATATGGGCCCACGGTTTGG 60.076 57.895 31.51 0.00 46.47 3.28
5620 6268 0.682855 ACATATGGGCCCACGGTTTG 60.683 55.000 31.51 21.52 0.00 2.93
5621 6269 0.395173 GACATATGGGCCCACGGTTT 60.395 55.000 31.51 14.42 0.00 3.27
5622 6270 1.226262 GACATATGGGCCCACGGTT 59.774 57.895 31.51 14.89 0.00 4.44
5623 6271 1.998438 TGACATATGGGCCCACGGT 60.998 57.895 31.51 25.37 0.00 4.83
5624 6272 1.525995 GTGACATATGGGCCCACGG 60.526 63.158 31.51 22.00 0.00 4.94
5625 6273 1.095228 GTGTGACATATGGGCCCACG 61.095 60.000 31.51 21.52 0.00 4.94
5626 6274 0.034574 TGTGTGACATATGGGCCCAC 60.035 55.000 31.51 15.44 0.00 4.61
5627 6275 0.034574 GTGTGTGACATATGGGCCCA 60.035 55.000 30.92 30.92 0.00 5.36
5628 6276 0.751643 GGTGTGTGACATATGGGCCC 60.752 60.000 17.59 17.59 0.00 5.80
5629 6277 1.095228 CGGTGTGTGACATATGGGCC 61.095 60.000 7.80 0.00 0.00 5.80
5630 6278 1.714899 GCGGTGTGTGACATATGGGC 61.715 60.000 7.80 0.00 0.00 5.36
5631 6279 1.095228 GGCGGTGTGTGACATATGGG 61.095 60.000 7.80 0.00 0.00 4.00
5632 6280 0.107703 AGGCGGTGTGTGACATATGG 60.108 55.000 7.80 0.00 0.00 2.74
5633 6281 1.665679 GAAGGCGGTGTGTGACATATG 59.334 52.381 0.00 0.00 0.00 1.78
5634 6282 1.406887 GGAAGGCGGTGTGTGACATAT 60.407 52.381 0.00 0.00 0.00 1.78
5635 6283 0.036765 GGAAGGCGGTGTGTGACATA 60.037 55.000 0.00 0.00 0.00 2.29
5636 6284 1.302511 GGAAGGCGGTGTGTGACAT 60.303 57.895 0.00 0.00 0.00 3.06
5637 6285 2.110213 GGAAGGCGGTGTGTGACA 59.890 61.111 0.00 0.00 0.00 3.58
5638 6286 2.668550 GGGAAGGCGGTGTGTGAC 60.669 66.667 0.00 0.00 0.00 3.67
5639 6287 2.463589 GATGGGAAGGCGGTGTGTGA 62.464 60.000 0.00 0.00 0.00 3.58
5640 6288 2.034066 ATGGGAAGGCGGTGTGTG 59.966 61.111 0.00 0.00 0.00 3.82
5641 6289 2.351276 GATGGGAAGGCGGTGTGT 59.649 61.111 0.00 0.00 0.00 3.72
5642 6290 2.438434 GGATGGGAAGGCGGTGTG 60.438 66.667 0.00 0.00 0.00 3.82
5643 6291 4.096003 CGGATGGGAAGGCGGTGT 62.096 66.667 0.00 0.00 0.00 4.16
5644 6292 4.096003 ACGGATGGGAAGGCGGTG 62.096 66.667 0.00 0.00 0.00 4.94
5645 6293 3.782443 GACGGATGGGAAGGCGGT 61.782 66.667 0.00 0.00 0.00 5.68
5646 6294 2.996168 GATGACGGATGGGAAGGCGG 62.996 65.000 0.00 0.00 0.00 6.13
5647 6295 1.595382 GATGACGGATGGGAAGGCG 60.595 63.158 0.00 0.00 0.00 5.52
5648 6296 1.595382 CGATGACGGATGGGAAGGC 60.595 63.158 0.00 0.00 35.72 4.35
5649 6297 1.595382 GCGATGACGGATGGGAAGG 60.595 63.158 0.00 0.00 40.15 3.46
5650 6298 1.595382 GGCGATGACGGATGGGAAG 60.595 63.158 0.00 0.00 40.15 3.46
5651 6299 2.504032 GGCGATGACGGATGGGAA 59.496 61.111 0.00 0.00 40.15 3.97
5652 6300 3.911698 CGGCGATGACGGATGGGA 61.912 66.667 0.00 0.00 40.15 4.37
5653 6301 3.733344 AACGGCGATGACGGATGGG 62.733 63.158 16.62 0.00 39.02 4.00
5654 6302 2.202878 AACGGCGATGACGGATGG 60.203 61.111 16.62 0.00 39.02 3.51
5655 6303 1.518352 TCAACGGCGATGACGGATG 60.518 57.895 16.16 0.00 39.02 3.51
5656 6304 1.518572 GTCAACGGCGATGACGGAT 60.519 57.895 29.66 0.00 39.02 4.18
5657 6305 2.126228 GTCAACGGCGATGACGGA 60.126 61.111 29.66 3.38 39.02 4.69
5660 6308 2.288969 GCTAGTCAACGGCGATGAC 58.711 57.895 34.06 34.06 45.94 3.06
5661 6309 4.806571 GCTAGTCAACGGCGATGA 57.193 55.556 16.16 16.16 0.00 2.92
5670 6318 4.789075 GACGGCGGCGCTAGTCAA 62.789 66.667 36.06 0.00 36.68 3.18
5682 6330 4.200283 CTCTCTCTGGCGGACGGC 62.200 72.222 11.56 11.56 42.51 5.68
5683 6331 2.438614 TCTCTCTCTGGCGGACGG 60.439 66.667 0.00 0.00 0.00 4.79
5684 6332 2.477176 CCTCTCTCTCTGGCGGACG 61.477 68.421 0.00 0.00 0.00 4.79
5685 6333 2.781158 GCCTCTCTCTCTGGCGGAC 61.781 68.421 0.00 0.00 37.11 4.79
5686 6334 2.441164 GCCTCTCTCTCTGGCGGA 60.441 66.667 0.00 0.00 37.11 5.54
5689 6337 2.433994 CCCTGCCTCTCTCTCTGGC 61.434 68.421 0.00 0.00 46.26 4.85
5690 6338 1.001503 ACCCTGCCTCTCTCTCTGG 59.998 63.158 0.00 0.00 0.00 3.86
5691 6339 0.614415 ACACCCTGCCTCTCTCTCTG 60.614 60.000 0.00 0.00 0.00 3.35
5692 6340 0.324275 GACACCCTGCCTCTCTCTCT 60.324 60.000 0.00 0.00 0.00 3.10
5693 6341 0.613292 TGACACCCTGCCTCTCTCTC 60.613 60.000 0.00 0.00 0.00 3.20
5694 6342 0.042431 ATGACACCCTGCCTCTCTCT 59.958 55.000 0.00 0.00 0.00 3.10
5695 6343 1.410882 GTATGACACCCTGCCTCTCTC 59.589 57.143 0.00 0.00 0.00 3.20
5696 6344 1.273267 TGTATGACACCCTGCCTCTCT 60.273 52.381 0.00 0.00 0.00 3.10
5697 6345 1.195115 TGTATGACACCCTGCCTCTC 58.805 55.000 0.00 0.00 0.00 3.20
5698 6346 1.556911 CTTGTATGACACCCTGCCTCT 59.443 52.381 0.00 0.00 0.00 3.69
5699 6347 1.555075 TCTTGTATGACACCCTGCCTC 59.445 52.381 0.00 0.00 0.00 4.70
5700 6348 1.279271 GTCTTGTATGACACCCTGCCT 59.721 52.381 0.00 0.00 36.97 4.75
5701 6349 1.279271 AGTCTTGTATGACACCCTGCC 59.721 52.381 0.00 0.00 39.27 4.85
5702 6350 2.770164 AGTCTTGTATGACACCCTGC 57.230 50.000 0.00 0.00 39.27 4.85
5703 6351 4.271696 TGAAGTCTTGTATGACACCCTG 57.728 45.455 0.00 0.00 39.27 4.45
5704 6352 5.505181 AATGAAGTCTTGTATGACACCCT 57.495 39.130 0.00 0.00 39.27 4.34
5705 6353 7.770897 AGATAAATGAAGTCTTGTATGACACCC 59.229 37.037 0.00 0.00 39.27 4.61
5706 6354 8.723942 AGATAAATGAAGTCTTGTATGACACC 57.276 34.615 0.00 0.00 39.27 4.16
5717 6365 9.084533 GGGTCTACATCTAGATAAATGAAGTCT 57.915 37.037 4.54 0.00 31.39 3.24
5718 6366 8.861086 TGGGTCTACATCTAGATAAATGAAGTC 58.139 37.037 4.54 0.00 31.39 3.01
5719 6367 8.783660 TGGGTCTACATCTAGATAAATGAAGT 57.216 34.615 4.54 0.00 31.39 3.01
5725 6373 9.120538 GCAAAAATGGGTCTACATCTAGATAAA 57.879 33.333 4.54 0.00 31.39 1.40
5726 6374 7.719633 GGCAAAAATGGGTCTACATCTAGATAA 59.280 37.037 4.54 0.00 31.39 1.75
5727 6375 7.072454 AGGCAAAAATGGGTCTACATCTAGATA 59.928 37.037 4.54 0.00 31.39 1.98
5728 6376 6.064717 GGCAAAAATGGGTCTACATCTAGAT 58.935 40.000 0.00 0.00 31.39 1.98
5729 6377 5.191722 AGGCAAAAATGGGTCTACATCTAGA 59.808 40.000 0.00 0.00 0.00 2.43
5730 6378 5.440610 AGGCAAAAATGGGTCTACATCTAG 58.559 41.667 0.00 0.00 0.00 2.43
5731 6379 5.450818 AGGCAAAAATGGGTCTACATCTA 57.549 39.130 0.00 0.00 0.00 1.98
5732 6380 4.322057 AGGCAAAAATGGGTCTACATCT 57.678 40.909 0.00 0.00 0.00 2.90
5733 6381 4.381932 CCAAGGCAAAAATGGGTCTACATC 60.382 45.833 0.00 0.00 0.00 3.06
5734 6382 3.515104 CCAAGGCAAAAATGGGTCTACAT 59.485 43.478 0.00 0.00 0.00 2.29
5735 6383 2.896685 CCAAGGCAAAAATGGGTCTACA 59.103 45.455 0.00 0.00 0.00 2.74
5736 6384 3.592898 CCAAGGCAAAAATGGGTCTAC 57.407 47.619 0.00 0.00 0.00 2.59
5742 6390 0.606130 GCACCCCAAGGCAAAAATGG 60.606 55.000 0.00 0.00 36.11 3.16
5743 6391 0.950071 CGCACCCCAAGGCAAAAATG 60.950 55.000 0.00 0.00 36.11 2.32
5744 6392 1.370810 CGCACCCCAAGGCAAAAAT 59.629 52.632 0.00 0.00 36.11 1.82
5745 6393 1.617947 AACGCACCCCAAGGCAAAAA 61.618 50.000 0.00 0.00 36.11 1.94
5746 6394 0.755698 TAACGCACCCCAAGGCAAAA 60.756 50.000 0.00 0.00 36.11 2.44
5747 6395 0.540830 ATAACGCACCCCAAGGCAAA 60.541 50.000 0.00 0.00 36.11 3.68
5748 6396 1.075836 ATAACGCACCCCAAGGCAA 59.924 52.632 0.00 0.00 36.11 4.52
5749 6397 1.677300 CATAACGCACCCCAAGGCA 60.677 57.895 0.00 0.00 36.11 4.75
5750 6398 1.248101 AACATAACGCACCCCAAGGC 61.248 55.000 0.00 0.00 36.11 4.35
5751 6399 1.741145 GTAACATAACGCACCCCAAGG 59.259 52.381 0.00 0.00 40.04 3.61
5752 6400 1.395608 CGTAACATAACGCACCCCAAG 59.604 52.381 0.00 0.00 35.87 3.61
5753 6401 1.440708 CGTAACATAACGCACCCCAA 58.559 50.000 0.00 0.00 35.87 4.12
5754 6402 0.391395 CCGTAACATAACGCACCCCA 60.391 55.000 0.00 0.00 41.51 4.96
5755 6403 0.391528 ACCGTAACATAACGCACCCC 60.392 55.000 0.00 0.00 41.51 4.95
5756 6404 2.292103 TACCGTAACATAACGCACCC 57.708 50.000 0.00 0.00 41.51 4.61
5757 6405 7.816945 ATATATTACCGTAACATAACGCACC 57.183 36.000 0.00 0.00 41.51 5.01
5795 6443 9.520515 ACAAATAGTTAATGGAGAAACAGATGT 57.479 29.630 0.00 0.00 0.00 3.06
5796 6444 9.994432 GACAAATAGTTAATGGAGAAACAGATG 57.006 33.333 0.00 0.00 0.00 2.90
5797 6445 9.739276 TGACAAATAGTTAATGGAGAAACAGAT 57.261 29.630 0.00 0.00 0.00 2.90
5798 6446 8.999431 GTGACAAATAGTTAATGGAGAAACAGA 58.001 33.333 0.00 0.00 0.00 3.41
5799 6447 8.783093 TGTGACAAATAGTTAATGGAGAAACAG 58.217 33.333 0.00 0.00 0.00 3.16
5800 6448 8.684386 TGTGACAAATAGTTAATGGAGAAACA 57.316 30.769 0.00 0.00 0.00 2.83
5804 6452 9.109393 GCTTATGTGACAAATAGTTAATGGAGA 57.891 33.333 0.00 0.00 0.00 3.71
5805 6453 8.892723 TGCTTATGTGACAAATAGTTAATGGAG 58.107 33.333 0.00 0.00 0.00 3.86
5806 6454 8.800370 TGCTTATGTGACAAATAGTTAATGGA 57.200 30.769 0.00 0.00 0.00 3.41
5807 6455 9.853555 TTTGCTTATGTGACAAATAGTTAATGG 57.146 29.630 0.00 0.00 0.00 3.16
5830 6478 4.626604 ACAACGCATATCAAGGCAAATTTG 59.373 37.500 14.03 14.03 31.14 2.32
5831 6479 4.626604 CACAACGCATATCAAGGCAAATTT 59.373 37.500 0.00 0.00 31.14 1.82
5832 6480 4.175516 CACAACGCATATCAAGGCAAATT 58.824 39.130 0.00 0.00 31.14 1.82
5833 6481 3.193267 ACACAACGCATATCAAGGCAAAT 59.807 39.130 0.00 0.00 31.14 2.32
5834 6482 2.556189 ACACAACGCATATCAAGGCAAA 59.444 40.909 0.00 0.00 31.14 3.68
5835 6483 2.158559 ACACAACGCATATCAAGGCAA 58.841 42.857 0.00 0.00 31.14 4.52
5836 6484 1.819928 ACACAACGCATATCAAGGCA 58.180 45.000 0.00 0.00 31.14 4.75
5837 6485 2.919666 AACACAACGCATATCAAGGC 57.080 45.000 0.00 0.00 0.00 4.35
5888 6536 9.271828 CACATACTGTAAATGACATGGCTATTA 57.728 33.333 0.00 0.00 37.45 0.98
5889 6537 7.229306 CCACATACTGTAAATGACATGGCTATT 59.771 37.037 0.00 0.00 37.45 1.73
5890 6538 6.712095 CCACATACTGTAAATGACATGGCTAT 59.288 38.462 0.00 0.00 37.45 2.97
5891 6539 6.054941 CCACATACTGTAAATGACATGGCTA 58.945 40.000 0.00 0.00 37.45 3.93
5892 6540 4.883585 CCACATACTGTAAATGACATGGCT 59.116 41.667 0.00 0.00 37.45 4.75
5893 6541 4.881273 TCCACATACTGTAAATGACATGGC 59.119 41.667 0.00 0.00 37.45 4.40
5894 6542 6.823182 TCTTCCACATACTGTAAATGACATGG 59.177 38.462 0.00 0.00 37.45 3.66
5895 6543 7.848223 TCTTCCACATACTGTAAATGACATG 57.152 36.000 0.00 0.00 37.45 3.21
5897 6545 9.952030 TTATTCTTCCACATACTGTAAATGACA 57.048 29.630 0.00 0.00 36.35 3.58
5903 6551 9.653287 CTGACTTTATTCTTCCACATACTGTAA 57.347 33.333 0.00 0.00 0.00 2.41
5904 6552 8.258007 CCTGACTTTATTCTTCCACATACTGTA 58.742 37.037 0.00 0.00 0.00 2.74
5905 6553 7.106239 CCTGACTTTATTCTTCCACATACTGT 58.894 38.462 0.00 0.00 0.00 3.55
5906 6554 6.540189 CCCTGACTTTATTCTTCCACATACTG 59.460 42.308 0.00 0.00 0.00 2.74
5907 6555 6.353082 CCCCTGACTTTATTCTTCCACATACT 60.353 42.308 0.00 0.00 0.00 2.12
5908 6556 5.823045 CCCCTGACTTTATTCTTCCACATAC 59.177 44.000 0.00 0.00 0.00 2.39
5909 6557 5.104109 CCCCCTGACTTTATTCTTCCACATA 60.104 44.000 0.00 0.00 0.00 2.29
5910 6558 4.325344 CCCCCTGACTTTATTCTTCCACAT 60.325 45.833 0.00 0.00 0.00 3.21
5911 6559 3.010138 CCCCCTGACTTTATTCTTCCACA 59.990 47.826 0.00 0.00 0.00 4.17
5912 6560 3.265995 TCCCCCTGACTTTATTCTTCCAC 59.734 47.826 0.00 0.00 0.00 4.02
5913 6561 3.537337 TCCCCCTGACTTTATTCTTCCA 58.463 45.455 0.00 0.00 0.00 3.53
5914 6562 4.797912 ATCCCCCTGACTTTATTCTTCC 57.202 45.455 0.00 0.00 0.00 3.46
5915 6563 4.889995 CCAATCCCCCTGACTTTATTCTTC 59.110 45.833 0.00 0.00 0.00 2.87
5916 6564 4.544152 TCCAATCCCCCTGACTTTATTCTT 59.456 41.667 0.00 0.00 0.00 2.52
5917 6565 4.119155 TCCAATCCCCCTGACTTTATTCT 58.881 43.478 0.00 0.00 0.00 2.40
5918 6566 4.079730 ACTCCAATCCCCCTGACTTTATTC 60.080 45.833 0.00 0.00 0.00 1.75
5919 6567 3.858638 ACTCCAATCCCCCTGACTTTATT 59.141 43.478 0.00 0.00 0.00 1.40
5920 6568 3.459969 GACTCCAATCCCCCTGACTTTAT 59.540 47.826 0.00 0.00 0.00 1.40
5921 6569 2.844348 GACTCCAATCCCCCTGACTTTA 59.156 50.000 0.00 0.00 0.00 1.85
5922 6570 1.636003 GACTCCAATCCCCCTGACTTT 59.364 52.381 0.00 0.00 0.00 2.66
5923 6571 1.290134 GACTCCAATCCCCCTGACTT 58.710 55.000 0.00 0.00 0.00 3.01
5924 6572 0.621862 GGACTCCAATCCCCCTGACT 60.622 60.000 0.00 0.00 31.94 3.41
5925 6573 1.915983 GGACTCCAATCCCCCTGAC 59.084 63.158 0.00 0.00 31.94 3.51
5926 6574 4.500125 GGACTCCAATCCCCCTGA 57.500 61.111 0.00 0.00 31.94 3.86
5936 6584 5.714806 GGTTTATCTGAATTTTGGGACTCCA 59.285 40.000 0.00 0.00 42.25 3.86
5937 6585 5.714806 TGGTTTATCTGAATTTTGGGACTCC 59.285 40.000 0.00 0.00 0.00 3.85
5938 6586 6.834168 TGGTTTATCTGAATTTTGGGACTC 57.166 37.500 0.00 0.00 0.00 3.36
5939 6587 6.211384 CCTTGGTTTATCTGAATTTTGGGACT 59.789 38.462 0.00 0.00 0.00 3.85
5940 6588 6.398095 CCTTGGTTTATCTGAATTTTGGGAC 58.602 40.000 0.00 0.00 0.00 4.46
5941 6589 5.046663 GCCTTGGTTTATCTGAATTTTGGGA 60.047 40.000 0.00 0.00 0.00 4.37
5942 6590 5.046376 AGCCTTGGTTTATCTGAATTTTGGG 60.046 40.000 0.00 0.00 0.00 4.12
5943 6591 6.041423 AGCCTTGGTTTATCTGAATTTTGG 57.959 37.500 0.00 0.00 0.00 3.28
5944 6592 9.143631 CTTTAGCCTTGGTTTATCTGAATTTTG 57.856 33.333 0.00 0.00 0.00 2.44
5945 6593 7.819415 GCTTTAGCCTTGGTTTATCTGAATTTT 59.181 33.333 0.00 0.00 34.31 1.82
5946 6594 7.039082 TGCTTTAGCCTTGGTTTATCTGAATTT 60.039 33.333 0.00 0.00 41.18 1.82
5947 6595 6.437162 TGCTTTAGCCTTGGTTTATCTGAATT 59.563 34.615 0.00 0.00 41.18 2.17
5948 6596 5.951747 TGCTTTAGCCTTGGTTTATCTGAAT 59.048 36.000 0.00 0.00 41.18 2.57
5949 6597 5.321102 TGCTTTAGCCTTGGTTTATCTGAA 58.679 37.500 0.00 0.00 41.18 3.02
5950 6598 4.917385 TGCTTTAGCCTTGGTTTATCTGA 58.083 39.130 0.00 0.00 41.18 3.27
5951 6599 4.702131 ACTGCTTTAGCCTTGGTTTATCTG 59.298 41.667 0.00 0.00 41.18 2.90
5952 6600 4.702131 CACTGCTTTAGCCTTGGTTTATCT 59.298 41.667 0.00 0.00 41.18 1.98
5953 6601 4.675408 GCACTGCTTTAGCCTTGGTTTATC 60.675 45.833 0.00 0.00 41.18 1.75
5954 6602 3.193479 GCACTGCTTTAGCCTTGGTTTAT 59.807 43.478 0.00 0.00 41.18 1.40
5955 6603 2.556622 GCACTGCTTTAGCCTTGGTTTA 59.443 45.455 0.00 0.00 41.18 2.01
5956 6604 1.341209 GCACTGCTTTAGCCTTGGTTT 59.659 47.619 0.00 0.00 41.18 3.27
5957 6605 0.961753 GCACTGCTTTAGCCTTGGTT 59.038 50.000 0.00 0.00 41.18 3.67
5958 6606 0.111253 AGCACTGCTTTAGCCTTGGT 59.889 50.000 0.00 0.00 41.18 3.67
5959 6607 2.952714 AGCACTGCTTTAGCCTTGG 58.047 52.632 0.00 0.00 41.18 3.61
5970 6618 3.641648 TGATTGTTTAGCAAAGCACTGC 58.358 40.909 1.96 1.96 40.91 4.40
5971 6619 3.671928 GCTGATTGTTTAGCAAAGCACTG 59.328 43.478 1.57 0.00 39.50 3.66
5972 6620 3.318839 TGCTGATTGTTTAGCAAAGCACT 59.681 39.130 4.48 0.00 46.06 4.40
5973 6621 3.641648 TGCTGATTGTTTAGCAAAGCAC 58.358 40.909 4.48 0.00 46.06 4.40
5980 6628 6.385537 CAATCTTGTTGCTGATTGTTTAGC 57.614 37.500 0.00 0.00 42.47 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.