Multiple sequence alignment - TraesCS3A01G391400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G391400 chr3A 100.000 4614 0 0 1 4614 639243047 639247660 0.000000e+00 8521.0
1 TraesCS3A01G391400 chr3B 90.557 2891 191 47 54 2909 660707697 660704854 0.000000e+00 3751.0
2 TraesCS3A01G391400 chr3B 89.540 956 47 15 3338 4275 660703369 660702449 0.000000e+00 1162.0
3 TraesCS3A01G391400 chr3B 91.743 218 15 3 2899 3114 660703580 660703364 2.700000e-77 300.0
4 TraesCS3A01G391400 chr3B 86.806 144 13 1 4359 4496 660702362 660702219 6.180000e-34 156.0
5 TraesCS3A01G391400 chr3D 92.273 2640 115 35 511 3110 499851572 499848982 0.000000e+00 3663.0
6 TraesCS3A01G391400 chr3D 94.717 814 29 6 3338 4150 499848984 499848184 0.000000e+00 1253.0
7 TraesCS3A01G391400 chr3D 93.111 450 11 10 4175 4613 499847554 499847114 3.890000e-180 641.0
8 TraesCS3A01G391400 chr6A 92.308 39 0 3 4112 4150 410908832 410908797 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G391400 chr3A 639243047 639247660 4613 False 8521.000000 8521 100.0000 1 4614 1 chr3A.!!$F1 4613
1 TraesCS3A01G391400 chr3B 660702219 660707697 5478 True 1342.250000 3751 89.6615 54 4496 4 chr3B.!!$R1 4442
2 TraesCS3A01G391400 chr3D 499847114 499851572 4458 True 1852.333333 3663 93.3670 511 4613 3 chr3D.!!$R1 4102

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
179 181 0.034089 CTCCCTTCCCCTTTCGCAAT 60.034 55.0 0.00 0.0 0.00 3.56 F
1109 1139 0.030705 CCTCTCCTTCCCCTCCATGA 60.031 60.0 0.00 0.0 0.00 3.07 F
1510 1553 0.108472 GCTGCAGGCCCTCAAATTTC 60.108 55.0 17.12 0.0 34.27 2.17 F
2513 2568 0.029300 TTTGCTTGCACTGAACGCTC 59.971 50.0 0.00 0.0 0.00 5.03 F
3188 4545 0.454452 GCCCGACGCAGAAAATTGTC 60.454 55.0 0.00 0.0 37.47 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1818 1866 0.178990 ACCACCCTTTCTCCTTGCAC 60.179 55.0 0.00 0.0 0.00 4.57 R
2243 2293 0.385390 ACAGCGCCAAGGTTGAAAAG 59.615 50.0 2.29 0.0 0.00 2.27 R
3169 4526 0.454452 GACAATTTTCTGCGTCGGGC 60.454 55.0 0.00 0.0 43.96 6.13 R
3505 4862 0.612174 TCTCCTTCTCCAGGGTCACG 60.612 60.0 0.00 0.0 44.12 4.35 R
4356 6337 0.945813 TGGCCGTAAAAAGTTGACCG 59.054 50.0 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.606717 GGGTTGTCCGAAAATCGAAC 57.393 50.000 0.58 0.00 43.74 3.95
20 21 1.136169 GGGTTGTCCGAAAATCGAACG 60.136 52.381 0.58 0.00 43.74 3.95
21 22 1.136169 GGTTGTCCGAAAATCGAACGG 60.136 52.381 14.36 14.36 43.74 4.44
22 23 1.528161 GTTGTCCGAAAATCGAACGGT 59.472 47.619 17.94 0.00 43.74 4.83
23 24 1.141645 TGTCCGAAAATCGAACGGTG 58.858 50.000 17.94 0.00 43.74 4.94
24 25 0.179233 GTCCGAAAATCGAACGGTGC 60.179 55.000 17.94 11.49 43.74 5.01
25 26 0.600518 TCCGAAAATCGAACGGTGCA 60.601 50.000 17.94 0.00 43.74 4.57
26 27 0.452122 CCGAAAATCGAACGGTGCAC 60.452 55.000 8.80 8.80 43.74 4.57
27 28 0.784250 CGAAAATCGAACGGTGCACG 60.784 55.000 11.45 8.92 43.74 5.34
37 38 3.596865 CGGTGCACGCGAAATTTAT 57.403 47.368 15.93 0.00 34.82 1.40
38 39 1.179332 CGGTGCACGCGAAATTTATG 58.821 50.000 15.93 0.00 34.82 1.90
39 40 1.544686 GGTGCACGCGAAATTTATGG 58.455 50.000 15.93 0.00 0.00 2.74
40 41 1.544686 GTGCACGCGAAATTTATGGG 58.455 50.000 15.93 0.00 0.00 4.00
41 42 0.453793 TGCACGCGAAATTTATGGGG 59.546 50.000 15.93 5.71 0.00 4.96
42 43 0.736053 GCACGCGAAATTTATGGGGA 59.264 50.000 15.93 0.00 0.00 4.81
43 44 1.133407 GCACGCGAAATTTATGGGGAA 59.867 47.619 15.93 0.00 0.00 3.97
44 45 2.223711 GCACGCGAAATTTATGGGGAAT 60.224 45.455 15.93 0.00 0.00 3.01
45 46 3.371168 CACGCGAAATTTATGGGGAATG 58.629 45.455 15.93 0.00 0.00 2.67
46 47 3.020984 ACGCGAAATTTATGGGGAATGT 58.979 40.909 15.93 0.00 0.00 2.71
47 48 3.181491 ACGCGAAATTTATGGGGAATGTG 60.181 43.478 15.93 0.00 0.00 3.21
48 49 3.066064 CGCGAAATTTATGGGGAATGTGA 59.934 43.478 0.00 0.00 0.00 3.58
49 50 4.439426 CGCGAAATTTATGGGGAATGTGAA 60.439 41.667 0.00 0.00 0.00 3.18
50 51 5.043248 GCGAAATTTATGGGGAATGTGAAG 58.957 41.667 0.00 0.00 0.00 3.02
51 52 5.163561 GCGAAATTTATGGGGAATGTGAAGA 60.164 40.000 0.00 0.00 0.00 2.87
52 53 6.461509 GCGAAATTTATGGGGAATGTGAAGAT 60.462 38.462 0.00 0.00 0.00 2.40
73 74 0.678950 CATCCAACAACCACCAACCC 59.321 55.000 0.00 0.00 0.00 4.11
79 80 1.419381 ACAACCACCAACCCAAATCC 58.581 50.000 0.00 0.00 0.00 3.01
82 83 0.266152 ACCACCAACCCAAATCCCAA 59.734 50.000 0.00 0.00 0.00 4.12
96 97 6.103997 CCAAATCCCAATGTTCATCTTCTTG 58.896 40.000 0.00 0.00 0.00 3.02
101 102 3.094572 CAATGTTCATCTTCTTGCCCCT 58.905 45.455 0.00 0.00 0.00 4.79
102 103 2.496899 TGTTCATCTTCTTGCCCCTC 57.503 50.000 0.00 0.00 0.00 4.30
103 104 1.988107 TGTTCATCTTCTTGCCCCTCT 59.012 47.619 0.00 0.00 0.00 3.69
105 106 3.013219 GTTCATCTTCTTGCCCCTCTTC 58.987 50.000 0.00 0.00 0.00 2.87
106 107 1.208052 TCATCTTCTTGCCCCTCTTCG 59.792 52.381 0.00 0.00 0.00 3.79
116 118 0.966370 CCCCTCTTCGTCTTCCTCGT 60.966 60.000 0.00 0.00 0.00 4.18
136 138 4.760047 CGTCGCCCTCCAACCCAG 62.760 72.222 0.00 0.00 0.00 4.45
146 148 2.754375 CAACCCAGCCCTAACCGT 59.246 61.111 0.00 0.00 0.00 4.83
148 150 2.951101 AACCCAGCCCTAACCGTCG 61.951 63.158 0.00 0.00 0.00 5.12
149 151 4.832608 CCCAGCCCTAACCGTCGC 62.833 72.222 0.00 0.00 0.00 5.19
151 153 4.832608 CAGCCCTAACCGTCGCCC 62.833 72.222 0.00 0.00 0.00 6.13
154 156 3.846430 CCCTAACCGTCGCCCTCC 61.846 72.222 0.00 0.00 0.00 4.30
178 180 1.378762 CTCCCTTCCCCTTTCGCAA 59.621 57.895 0.00 0.00 0.00 4.85
179 181 0.034089 CTCCCTTCCCCTTTCGCAAT 60.034 55.000 0.00 0.00 0.00 3.56
180 182 0.034477 TCCCTTCCCCTTTCGCAATC 60.034 55.000 0.00 0.00 0.00 2.67
181 183 0.323360 CCCTTCCCCTTTCGCAATCA 60.323 55.000 0.00 0.00 0.00 2.57
182 184 0.811281 CCTTCCCCTTTCGCAATCAC 59.189 55.000 0.00 0.00 0.00 3.06
184 186 0.250553 TTCCCCTTTCGCAATCACGT 60.251 50.000 0.00 0.00 0.00 4.49
186 188 0.953471 CCCCTTTCGCAATCACGTCA 60.953 55.000 0.00 0.00 0.00 4.35
188 190 0.165944 CCTTTCGCAATCACGTCACC 59.834 55.000 0.00 0.00 0.00 4.02
189 191 0.865111 CTTTCGCAATCACGTCACCA 59.135 50.000 0.00 0.00 0.00 4.17
190 192 0.584396 TTTCGCAATCACGTCACCAC 59.416 50.000 0.00 0.00 0.00 4.16
191 193 0.249699 TTCGCAATCACGTCACCACT 60.250 50.000 0.00 0.00 0.00 4.00
192 194 0.666274 TCGCAATCACGTCACCACTC 60.666 55.000 0.00 0.00 0.00 3.51
193 195 0.667487 CGCAATCACGTCACCACTCT 60.667 55.000 0.00 0.00 0.00 3.24
194 196 0.792640 GCAATCACGTCACCACTCTG 59.207 55.000 0.00 0.00 0.00 3.35
195 197 0.792640 CAATCACGTCACCACTCTGC 59.207 55.000 0.00 0.00 0.00 4.26
206 208 1.817099 CACTCTGCCCTTCCATCGC 60.817 63.158 0.00 0.00 0.00 4.58
223 225 3.792047 CCGCAGTGCACCGTCATG 61.792 66.667 16.83 5.89 0.00 3.07
224 226 4.450122 CGCAGTGCACCGTCATGC 62.450 66.667 16.83 15.37 46.32 4.06
226 228 3.434319 CAGTGCACCGTCATGCCC 61.434 66.667 14.63 0.00 45.50 5.36
227 229 3.640407 AGTGCACCGTCATGCCCT 61.640 61.111 14.63 0.00 45.50 5.19
228 230 3.434319 GTGCACCGTCATGCCCTG 61.434 66.667 5.22 0.00 45.50 4.45
229 231 3.952508 TGCACCGTCATGCCCTGT 61.953 61.111 1.61 0.00 45.50 4.00
230 232 3.127533 GCACCGTCATGCCCTGTC 61.128 66.667 0.00 0.00 39.86 3.51
232 235 4.760047 ACCGTCATGCCCTGTCGC 62.760 66.667 0.00 0.00 35.46 5.19
248 251 2.832201 GCCCAAGGCCATCTCTGC 60.832 66.667 5.01 0.00 44.06 4.26
249 252 3.004951 CCCAAGGCCATCTCTGCT 58.995 61.111 5.01 0.00 0.00 4.24
253 256 2.381941 AAGGCCATCTCTGCTCCCC 61.382 63.158 5.01 0.00 0.00 4.81
254 257 3.092511 GGCCATCTCTGCTCCCCA 61.093 66.667 0.00 0.00 0.00 4.96
257 260 2.750657 CCATCTCTGCTCCCCACCC 61.751 68.421 0.00 0.00 0.00 4.61
258 261 2.367512 ATCTCTGCTCCCCACCCC 60.368 66.667 0.00 0.00 0.00 4.95
284 287 2.884639 CCACTTTCCTGTTTTCCGACAT 59.115 45.455 0.00 0.00 0.00 3.06
291 294 4.900684 TCCTGTTTTCCGACATCAACATA 58.099 39.130 0.00 0.00 0.00 2.29
292 295 5.496556 TCCTGTTTTCCGACATCAACATAT 58.503 37.500 0.00 0.00 0.00 1.78
298 301 3.792401 TCCGACATCAACATATCCACAC 58.208 45.455 0.00 0.00 0.00 3.82
307 310 0.255604 CATATCCACACCTGCACCCA 59.744 55.000 0.00 0.00 0.00 4.51
314 317 1.978617 CACCTGCACCCATCAACCC 60.979 63.158 0.00 0.00 0.00 4.11
337 340 1.153005 CCTCGCCTACCTAGGACGT 60.153 63.158 17.98 0.00 46.63 4.34
342 345 2.023318 CCTACCTAGGACGTCGCAG 58.977 63.158 17.98 8.69 46.63 5.18
343 346 0.747283 CCTACCTAGGACGTCGCAGT 60.747 60.000 17.98 6.91 46.63 4.40
344 347 1.093159 CTACCTAGGACGTCGCAGTT 58.907 55.000 17.98 0.00 0.00 3.16
345 348 1.471684 CTACCTAGGACGTCGCAGTTT 59.528 52.381 17.98 1.25 0.00 2.66
346 349 0.038526 ACCTAGGACGTCGCAGTTTG 60.039 55.000 17.98 0.00 0.00 2.93
347 350 1.352156 CCTAGGACGTCGCAGTTTGC 61.352 60.000 9.92 0.00 40.69 3.68
348 351 0.388649 CTAGGACGTCGCAGTTTGCT 60.389 55.000 9.92 0.57 42.25 3.91
349 352 0.883153 TAGGACGTCGCAGTTTGCTA 59.117 50.000 9.92 0.00 42.25 3.49
350 353 0.666577 AGGACGTCGCAGTTTGCTAC 60.667 55.000 9.92 0.00 42.25 3.58
352 355 1.941476 GACGTCGCAGTTTGCTACCG 61.941 60.000 0.00 1.73 42.25 4.02
376 379 4.176752 GCGTCACCCCCATCTCCC 62.177 72.222 0.00 0.00 0.00 4.30
394 397 4.154347 GGCGAGGTCCTGGCTCAG 62.154 72.222 23.39 0.00 35.57 3.35
418 421 3.902063 CGGCATCAACGCTCGTCG 61.902 66.667 0.00 0.00 45.38 5.12
419 422 4.210304 GGCATCAACGCTCGTCGC 62.210 66.667 0.00 0.00 43.23 5.19
449 452 0.758734 CACATAGCCCCCATCTTCGA 59.241 55.000 0.00 0.00 0.00 3.71
458 461 0.394565 CCCATCTTCGACCTCATCCC 59.605 60.000 0.00 0.00 0.00 3.85
463 466 4.202441 CATCTTCGACCTCATCCCAAAAT 58.798 43.478 0.00 0.00 0.00 1.82
468 471 2.289565 GACCTCATCCCAAAATCGACC 58.710 52.381 0.00 0.00 0.00 4.79
469 472 1.633432 ACCTCATCCCAAAATCGACCA 59.367 47.619 0.00 0.00 0.00 4.02
471 474 1.672881 CTCATCCCAAAATCGACCAGC 59.327 52.381 0.00 0.00 0.00 4.85
475 478 2.574212 CAAAATCGACCAGCGCGC 60.574 61.111 26.66 26.66 40.61 6.86
487 490 2.314033 GCGCGCGCAAAATTCATG 59.686 55.556 46.11 12.36 41.49 3.07
497 500 5.276161 CGCGCAAAATTCATGGGTAAATTAC 60.276 40.000 8.75 0.00 33.64 1.89
502 505 8.327429 GCAAAATTCATGGGTAAATTACGATTG 58.673 33.333 0.00 0.00 0.00 2.67
505 508 4.527944 TCATGGGTAAATTACGATTGGCA 58.472 39.130 0.00 0.00 0.00 4.92
521 524 8.450578 ACGATTGGCAAATAGAATCAATAGAA 57.549 30.769 3.01 0.00 0.00 2.10
585 594 2.206576 AAACTGTTCCTCCATGCCTC 57.793 50.000 0.00 0.00 0.00 4.70
667 676 4.675065 TCCTTTCTATCTATCCTCCCCTCA 59.325 45.833 0.00 0.00 0.00 3.86
722 731 0.105408 AAAAGCAAAGCAGCCACAGG 59.895 50.000 0.00 0.00 34.23 4.00
855 869 2.750350 CCCACACCCAGACCTCAC 59.250 66.667 0.00 0.00 0.00 3.51
889 903 2.737252 CGGTCTTCTTCTTGCTTGGTAC 59.263 50.000 0.00 0.00 0.00 3.34
954 978 3.430651 CCAGCTTCTCTCTCTGAACCATC 60.431 52.174 0.00 0.00 0.00 3.51
957 981 1.769026 TCTCTCTCTGAACCATCCCG 58.231 55.000 0.00 0.00 0.00 5.14
983 1013 2.840753 GCCACAGGGGGTTCTTGGA 61.841 63.158 0.00 0.00 37.04 3.53
1011 1041 1.986575 GAAGAGCCATGCTTCACGGC 61.987 60.000 6.67 0.00 46.62 5.68
1109 1139 0.030705 CCTCTCCTTCCCCTCCATGA 60.031 60.000 0.00 0.00 0.00 3.07
1131 1172 4.320608 TTTTCTTGATTCTGGGTGTTGC 57.679 40.909 0.00 0.00 0.00 4.17
1136 1177 1.980765 TGATTCTGGGTGTTGCTCTCT 59.019 47.619 0.00 0.00 0.00 3.10
1154 1195 7.865707 TGCTCTCTTTCTGTACTTGATTTTTC 58.134 34.615 0.00 0.00 0.00 2.29
1217 1258 0.675633 CTGGCTGTTTTTGGTCCCTG 59.324 55.000 0.00 0.00 0.00 4.45
1242 1283 4.994220 TGACATGTTTGATGCAATTTGC 57.006 36.364 14.49 14.49 45.29 3.68
1263 1304 2.384828 GGGGGTGTTAAATCCATGTCC 58.615 52.381 0.00 0.00 0.00 4.02
1287 1328 2.159198 AGGCATGTTTTGATGAATCGGC 60.159 45.455 0.00 0.00 0.00 5.54
1509 1552 0.832983 TGCTGCAGGCCCTCAAATTT 60.833 50.000 17.12 0.00 40.92 1.82
1510 1553 0.108472 GCTGCAGGCCCTCAAATTTC 60.108 55.000 17.12 0.00 34.27 2.17
1512 1555 1.897802 CTGCAGGCCCTCAAATTTCTT 59.102 47.619 5.57 0.00 0.00 2.52
1523 1566 6.875726 GCCCTCAAATTTCTTAGCTGAATTTT 59.124 34.615 0.00 0.00 32.91 1.82
1619 1662 2.034558 GGTTTATGTTGATGGGGATGCG 59.965 50.000 0.00 0.00 0.00 4.73
1687 1734 1.531423 ATGCATAGCAGGCACATAGC 58.469 50.000 0.00 0.00 45.23 2.97
1716 1764 5.459536 AAATTCTTCAGTTTCAGGCCTTC 57.540 39.130 0.00 0.00 0.00 3.46
1720 1768 3.136443 TCTTCAGTTTCAGGCCTTCTTCA 59.864 43.478 0.00 0.00 0.00 3.02
1733 1781 1.462283 CTTCTTCATGCACTGACACCG 59.538 52.381 0.00 0.00 32.17 4.94
1814 1862 0.108804 GAGGAGAACGTCATGGCGAA 60.109 55.000 28.94 0.00 35.59 4.70
1815 1863 0.108615 AGGAGAACGTCATGGCGAAG 60.109 55.000 28.94 0.00 35.59 3.79
1818 1866 0.108615 AGAACGTCATGGCGAAGGAG 60.109 55.000 28.94 0.00 35.59 3.69
1830 1878 1.878102 GCGAAGGAGTGCAAGGAGAAA 60.878 52.381 0.00 0.00 0.00 2.52
2006 2054 0.463833 CGAGACTGGTAATTGCCCCC 60.464 60.000 10.34 0.00 0.00 5.40
2037 2087 2.722094 TGCTTATCCGTTTGAGGCATT 58.278 42.857 0.00 0.00 0.00 3.56
2192 2242 1.098050 GGCGACAGCTTTGGAATCAT 58.902 50.000 0.00 0.00 44.37 2.45
2225 2275 3.214697 TGCATTTGTATTGTGCGAAGG 57.785 42.857 0.00 0.00 41.61 3.46
2236 2286 2.422597 TGTGCGAAGGAGTTATTGGTG 58.577 47.619 0.00 0.00 0.00 4.17
2243 2293 3.073274 AGGAGTTATTGGTGCAGTTCC 57.927 47.619 0.00 0.00 0.00 3.62
2284 2335 1.273606 TGTGAGCTGCTCCTACTCAAC 59.726 52.381 25.61 15.58 41.80 3.18
2308 2359 0.043637 TGTTGGTAGGGGTAGGGAGG 59.956 60.000 0.00 0.00 0.00 4.30
2335 2389 4.196971 AGTTCAACAACCCAACAGTAGTC 58.803 43.478 0.00 0.00 32.22 2.59
2341 2395 5.048846 ACAACCCAACAGTAGTCTTTGAT 57.951 39.130 0.00 0.00 0.00 2.57
2369 2423 7.756272 CACACAATTCTGCATTTTATTGCTCTA 59.244 33.333 9.01 0.00 43.18 2.43
2466 2520 4.438797 CGCTGATTCACTGTTGTTTGAAAG 59.561 41.667 0.00 0.00 35.42 2.62
2467 2521 5.581605 GCTGATTCACTGTTGTTTGAAAGA 58.418 37.500 0.00 0.00 35.42 2.52
2510 2565 0.248580 TGCTTTGCTTGCACTGAACG 60.249 50.000 0.00 0.00 35.31 3.95
2513 2568 0.029300 TTTGCTTGCACTGAACGCTC 59.971 50.000 0.00 0.00 0.00 5.03
2565 2628 5.940470 CAGTGTTTCTTATTGGCCTTCTACT 59.060 40.000 3.32 0.00 0.00 2.57
2566 2629 5.940470 AGTGTTTCTTATTGGCCTTCTACTG 59.060 40.000 3.32 0.00 0.00 2.74
2567 2630 5.705905 GTGTTTCTTATTGGCCTTCTACTGT 59.294 40.000 3.32 0.00 0.00 3.55
2568 2631 5.938125 TGTTTCTTATTGGCCTTCTACTGTC 59.062 40.000 3.32 0.00 0.00 3.51
2569 2632 5.755409 TTCTTATTGGCCTTCTACTGTCA 57.245 39.130 3.32 0.00 0.00 3.58
2570 2633 5.755409 TCTTATTGGCCTTCTACTGTCAA 57.245 39.130 3.32 0.00 0.00 3.18
2571 2634 5.488341 TCTTATTGGCCTTCTACTGTCAAC 58.512 41.667 3.32 0.00 0.00 3.18
2572 2635 5.248477 TCTTATTGGCCTTCTACTGTCAACT 59.752 40.000 3.32 0.00 0.00 3.16
2573 2636 6.439375 TCTTATTGGCCTTCTACTGTCAACTA 59.561 38.462 3.32 0.00 0.00 2.24
2616 2679 3.510719 CAACCATTCCAACTTTATGCCG 58.489 45.455 0.00 0.00 0.00 5.69
2647 2710 5.424252 AGAGACACATTCGGTTATCCCTTTA 59.576 40.000 0.00 0.00 0.00 1.85
2649 2712 6.659824 AGACACATTCGGTTATCCCTTTAAT 58.340 36.000 0.00 0.00 0.00 1.40
2651 2714 8.269317 AGACACATTCGGTTATCCCTTTAATTA 58.731 33.333 0.00 0.00 0.00 1.40
2653 2716 7.501225 ACACATTCGGTTATCCCTTTAATTAGG 59.499 37.037 0.00 0.00 34.92 2.69
2654 2717 6.489022 ACATTCGGTTATCCCTTTAATTAGGC 59.511 38.462 0.00 0.00 33.73 3.93
2655 2718 5.633655 TCGGTTATCCCTTTAATTAGGCA 57.366 39.130 0.00 0.00 33.73 4.75
2656 2719 5.370679 TCGGTTATCCCTTTAATTAGGCAC 58.629 41.667 0.00 0.00 33.73 5.01
2657 2720 5.131475 TCGGTTATCCCTTTAATTAGGCACT 59.869 40.000 0.00 0.00 46.37 4.40
2658 2721 5.238650 CGGTTATCCCTTTAATTAGGCACTG 59.761 44.000 0.00 0.00 41.52 3.66
2659 2722 6.127101 GGTTATCCCTTTAATTAGGCACTGT 58.873 40.000 0.00 0.00 41.52 3.55
2660 2723 7.284820 GGTTATCCCTTTAATTAGGCACTGTA 58.715 38.462 0.00 0.00 41.52 2.74
2662 2725 9.350951 GTTATCCCTTTAATTAGGCACTGTATT 57.649 33.333 0.00 0.00 41.52 1.89
2666 2729 9.349713 TCCCTTTAATTAGGCACTGTATTTATG 57.650 33.333 0.00 0.00 41.52 1.90
2742 2812 6.491394 TGCTGTTTGTCACACTAAATACAAC 58.509 36.000 0.00 0.00 31.92 3.32
2745 2815 5.816258 TGTTTGTCACACTAAATACAACGGA 59.184 36.000 0.00 0.00 31.92 4.69
2746 2816 5.910637 TTGTCACACTAAATACAACGGAC 57.089 39.130 0.00 0.00 0.00 4.79
2747 2817 5.204409 TGTCACACTAAATACAACGGACT 57.796 39.130 0.00 0.00 0.00 3.85
2748 2818 6.330004 TGTCACACTAAATACAACGGACTA 57.670 37.500 0.00 0.00 0.00 2.59
2854 2924 3.361644 GCAATTGTCAATAGCACAACACG 59.638 43.478 7.40 0.00 36.59 4.49
2972 4328 3.439129 GTGTACCAAGGCAAGTGTTATCC 59.561 47.826 0.00 0.00 0.00 2.59
3040 4397 7.931407 TGTCGTTATAATGATAATGAACTGGCT 59.069 33.333 10.52 0.00 42.53 4.75
3047 4404 3.943381 TGATAATGAACTGGCTGCTTCAG 59.057 43.478 8.47 6.65 38.16 3.02
3052 4409 2.158827 TGAACTGGCTGCTTCAGTACAA 60.159 45.455 11.15 0.00 43.82 2.41
3060 4417 3.411446 CTGCTTCAGTACAATGTTGGGA 58.589 45.455 0.00 0.00 0.00 4.37
3063 4420 3.411446 CTTCAGTACAATGTTGGGAGCA 58.589 45.455 0.00 0.00 0.00 4.26
3078 4435 1.065564 GGAGCAGTCAATGGCTTCTCT 60.066 52.381 13.63 0.00 41.22 3.10
3097 4454 6.590234 TCTCTAACAGCATTACTTCAGACA 57.410 37.500 0.00 0.00 0.00 3.41
3101 4458 7.615403 TCTAACAGCATTACTTCAGACAAGAT 58.385 34.615 0.00 0.00 0.00 2.40
3102 4459 6.492007 AACAGCATTACTTCAGACAAGATG 57.508 37.500 0.00 0.00 0.00 2.90
3103 4460 4.394300 ACAGCATTACTTCAGACAAGATGC 59.606 41.667 0.00 0.00 38.84 3.91
3104 4461 4.393990 CAGCATTACTTCAGACAAGATGCA 59.606 41.667 7.96 0.00 40.47 3.96
3105 4462 4.634883 AGCATTACTTCAGACAAGATGCAG 59.365 41.667 7.96 0.00 40.47 4.41
3106 4463 4.394300 GCATTACTTCAGACAAGATGCAGT 59.606 41.667 0.00 0.00 38.52 4.40
3107 4464 5.106396 GCATTACTTCAGACAAGATGCAGTT 60.106 40.000 0.00 0.00 38.52 3.16
3108 4465 6.569226 GCATTACTTCAGACAAGATGCAGTTT 60.569 38.462 0.00 0.00 38.52 2.66
3109 4466 4.825546 ACTTCAGACAAGATGCAGTTTG 57.174 40.909 10.47 10.47 0.00 2.93
3110 4467 3.004106 ACTTCAGACAAGATGCAGTTTGC 59.996 43.478 11.64 6.23 45.29 3.68
3111 4468 2.854963 TCAGACAAGATGCAGTTTGCT 58.145 42.857 11.64 7.95 45.31 3.91
3112 4469 2.551032 TCAGACAAGATGCAGTTTGCTG 59.449 45.455 19.50 19.50 45.31 4.41
3125 4482 4.801891 CAGTTTGCTGCAATTGTATCTGT 58.198 39.130 16.77 0.00 35.77 3.41
3126 4483 5.941733 CAGTTTGCTGCAATTGTATCTGTA 58.058 37.500 16.77 0.00 35.77 2.74
3127 4484 6.025896 CAGTTTGCTGCAATTGTATCTGTAG 58.974 40.000 16.77 0.00 35.77 2.74
3128 4485 5.939883 AGTTTGCTGCAATTGTATCTGTAGA 59.060 36.000 16.77 0.00 0.00 2.59
3129 4486 6.600822 AGTTTGCTGCAATTGTATCTGTAGAT 59.399 34.615 16.77 0.00 38.51 1.98
3130 4487 7.770433 AGTTTGCTGCAATTGTATCTGTAGATA 59.230 33.333 16.77 0.00 36.05 1.98
3145 4502 7.549147 TCTGTAGATACTTTTGGTAACTGGT 57.451 36.000 0.00 0.00 34.96 4.00
3146 4503 7.609056 TCTGTAGATACTTTTGGTAACTGGTC 58.391 38.462 0.00 0.00 34.96 4.02
3147 4504 7.453752 TCTGTAGATACTTTTGGTAACTGGTCT 59.546 37.037 0.00 0.00 34.96 3.85
3148 4505 8.654485 TGTAGATACTTTTGGTAACTGGTCTA 57.346 34.615 0.00 0.00 34.96 2.59
3149 4506 9.263446 TGTAGATACTTTTGGTAACTGGTCTAT 57.737 33.333 0.00 0.00 34.96 1.98
3150 4507 9.747293 GTAGATACTTTTGGTAACTGGTCTATC 57.253 37.037 0.00 0.00 34.96 2.08
3151 4508 7.490000 AGATACTTTTGGTAACTGGTCTATCG 58.510 38.462 0.00 0.00 33.25 2.92
3152 4509 4.251268 ACTTTTGGTAACTGGTCTATCGC 58.749 43.478 0.00 0.00 37.61 4.58
3153 4510 4.020485 ACTTTTGGTAACTGGTCTATCGCT 60.020 41.667 0.00 0.00 37.61 4.93
3154 4511 5.186409 ACTTTTGGTAACTGGTCTATCGCTA 59.814 40.000 0.00 0.00 37.61 4.26
3155 4512 5.864418 TTTGGTAACTGGTCTATCGCTAT 57.136 39.130 0.00 0.00 37.61 2.97
3156 4513 5.864418 TTGGTAACTGGTCTATCGCTATT 57.136 39.130 0.00 0.00 37.61 1.73
3157 4514 6.964807 TTGGTAACTGGTCTATCGCTATTA 57.035 37.500 0.00 0.00 37.61 0.98
3158 4515 6.570672 TGGTAACTGGTCTATCGCTATTAG 57.429 41.667 0.00 0.00 37.61 1.73
3159 4516 5.048224 TGGTAACTGGTCTATCGCTATTAGC 60.048 44.000 5.56 5.56 35.84 3.09
3160 4517 4.522722 AACTGGTCTATCGCTATTAGCC 57.477 45.455 10.04 0.00 38.18 3.93
3161 4518 3.768878 ACTGGTCTATCGCTATTAGCCT 58.231 45.455 10.04 0.89 38.18 4.58
3162 4519 4.153411 ACTGGTCTATCGCTATTAGCCTT 58.847 43.478 10.04 0.72 38.18 4.35
3163 4520 4.021894 ACTGGTCTATCGCTATTAGCCTTG 60.022 45.833 10.04 0.00 38.18 3.61
3164 4521 3.254892 GGTCTATCGCTATTAGCCTTGC 58.745 50.000 10.04 0.00 38.18 4.01
3165 4522 3.306088 GGTCTATCGCTATTAGCCTTGCA 60.306 47.826 10.04 0.00 38.18 4.08
3166 4523 3.923461 GTCTATCGCTATTAGCCTTGCAG 59.077 47.826 10.04 1.58 38.18 4.41
3167 4524 2.918712 ATCGCTATTAGCCTTGCAGT 57.081 45.000 10.04 0.00 38.18 4.40
3168 4525 1.939974 TCGCTATTAGCCTTGCAGTG 58.060 50.000 10.04 0.00 38.18 3.66
3169 4526 0.940126 CGCTATTAGCCTTGCAGTGG 59.060 55.000 10.04 3.73 38.18 4.00
3181 4538 4.680237 CAGTGGCCCGACGCAGAA 62.680 66.667 0.00 0.00 40.31 3.02
3182 4539 3.936203 AGTGGCCCGACGCAGAAA 61.936 61.111 0.00 0.00 40.31 2.52
3183 4540 2.975799 GTGGCCCGACGCAGAAAA 60.976 61.111 0.00 0.00 40.31 2.29
3184 4541 2.033448 TGGCCCGACGCAGAAAAT 59.967 55.556 0.00 0.00 40.31 1.82
3185 4542 1.602323 TGGCCCGACGCAGAAAATT 60.602 52.632 0.00 0.00 40.31 1.82
3186 4543 1.154035 GGCCCGACGCAGAAAATTG 60.154 57.895 0.00 0.00 40.31 2.32
3187 4544 1.579429 GCCCGACGCAGAAAATTGT 59.421 52.632 0.00 0.00 37.47 2.71
3188 4545 0.454452 GCCCGACGCAGAAAATTGTC 60.454 55.000 0.00 0.00 37.47 3.18
3189 4546 0.871722 CCCGACGCAGAAAATTGTCA 59.128 50.000 0.00 0.00 0.00 3.58
3190 4547 1.265635 CCCGACGCAGAAAATTGTCAA 59.734 47.619 0.00 0.00 0.00 3.18
3191 4548 2.574322 CCGACGCAGAAAATTGTCAAG 58.426 47.619 0.00 0.00 0.00 3.02
3192 4549 2.032030 CCGACGCAGAAAATTGTCAAGT 60.032 45.455 0.00 0.00 0.00 3.16
3193 4550 3.548014 CCGACGCAGAAAATTGTCAAGTT 60.548 43.478 0.00 0.00 0.00 2.66
3194 4551 4.319190 CCGACGCAGAAAATTGTCAAGTTA 60.319 41.667 0.00 0.00 0.00 2.24
3195 4552 5.201910 CGACGCAGAAAATTGTCAAGTTAA 58.798 37.500 0.00 0.00 0.00 2.01
3196 4553 5.336990 CGACGCAGAAAATTGTCAAGTTAAG 59.663 40.000 0.00 0.00 0.00 1.85
3197 4554 5.519722 ACGCAGAAAATTGTCAAGTTAAGG 58.480 37.500 0.00 0.00 0.00 2.69
3198 4555 4.917415 CGCAGAAAATTGTCAAGTTAAGGG 59.083 41.667 0.00 0.00 0.00 3.95
3199 4556 5.278266 CGCAGAAAATTGTCAAGTTAAGGGA 60.278 40.000 0.00 0.00 0.00 4.20
3200 4557 6.512297 GCAGAAAATTGTCAAGTTAAGGGAA 58.488 36.000 0.00 0.00 0.00 3.97
3201 4558 6.642540 GCAGAAAATTGTCAAGTTAAGGGAAG 59.357 38.462 0.00 0.00 0.00 3.46
3202 4559 7.470009 GCAGAAAATTGTCAAGTTAAGGGAAGA 60.470 37.037 0.00 0.00 0.00 2.87
3203 4560 8.413229 CAGAAAATTGTCAAGTTAAGGGAAGAA 58.587 33.333 0.00 0.00 0.00 2.52
3204 4561 8.633561 AGAAAATTGTCAAGTTAAGGGAAGAAG 58.366 33.333 0.00 0.00 0.00 2.85
3205 4562 6.901081 AATTGTCAAGTTAAGGGAAGAAGG 57.099 37.500 0.00 0.00 0.00 3.46
3206 4563 5.382664 TTGTCAAGTTAAGGGAAGAAGGT 57.617 39.130 0.00 0.00 0.00 3.50
3207 4564 5.382664 TGTCAAGTTAAGGGAAGAAGGTT 57.617 39.130 0.00 0.00 0.00 3.50
3208 4565 5.374071 TGTCAAGTTAAGGGAAGAAGGTTC 58.626 41.667 0.00 0.00 0.00 3.62
3209 4566 4.760715 GTCAAGTTAAGGGAAGAAGGTTCC 59.239 45.833 0.00 0.00 37.86 3.62
3210 4567 3.697619 AGTTAAGGGAAGAAGGTTCCG 57.302 47.619 0.00 0.00 39.46 4.30
3211 4568 2.977580 AGTTAAGGGAAGAAGGTTCCGT 59.022 45.455 0.00 0.00 39.46 4.69
3212 4569 3.393609 AGTTAAGGGAAGAAGGTTCCGTT 59.606 43.478 14.29 14.29 45.36 4.44
3213 4570 4.594491 AGTTAAGGGAAGAAGGTTCCGTTA 59.406 41.667 12.65 12.65 42.73 3.18
3215 4572 3.413846 AGGGAAGAAGGTTCCGTTAAC 57.586 47.619 0.00 0.00 39.46 2.01
3216 4573 2.977580 AGGGAAGAAGGTTCCGTTAACT 59.022 45.455 3.71 0.00 39.46 2.24
3217 4574 3.007723 AGGGAAGAAGGTTCCGTTAACTC 59.992 47.826 3.71 0.00 39.46 3.01
3218 4575 2.991866 GGAAGAAGGTTCCGTTAACTCG 59.008 50.000 3.71 0.00 38.23 4.18
3219 4576 3.305608 GGAAGAAGGTTCCGTTAACTCGA 60.306 47.826 3.71 0.00 38.23 4.04
3220 4577 4.492611 GAAGAAGGTTCCGTTAACTCGAT 58.507 43.478 3.71 0.00 38.23 3.59
3221 4578 4.532314 AGAAGGTTCCGTTAACTCGATT 57.468 40.909 3.71 0.00 38.23 3.34
3222 4579 4.492611 AGAAGGTTCCGTTAACTCGATTC 58.507 43.478 3.71 1.36 38.23 2.52
3223 4580 3.242549 AGGTTCCGTTAACTCGATTCC 57.757 47.619 3.71 5.45 38.23 3.01
3224 4581 2.830321 AGGTTCCGTTAACTCGATTCCT 59.170 45.455 3.71 7.30 38.23 3.36
3225 4582 3.260128 AGGTTCCGTTAACTCGATTCCTT 59.740 43.478 3.71 0.00 38.23 3.36
3226 4583 3.999001 GGTTCCGTTAACTCGATTCCTTT 59.001 43.478 3.71 0.00 38.23 3.11
3227 4584 4.453478 GGTTCCGTTAACTCGATTCCTTTT 59.547 41.667 3.71 0.00 38.23 2.27
3228 4585 5.379827 GTTCCGTTAACTCGATTCCTTTTG 58.620 41.667 3.71 0.00 35.05 2.44
3229 4586 4.885413 TCCGTTAACTCGATTCCTTTTGA 58.115 39.130 3.71 0.00 0.00 2.69
3230 4587 5.484715 TCCGTTAACTCGATTCCTTTTGAT 58.515 37.500 3.71 0.00 0.00 2.57
3231 4588 5.579511 TCCGTTAACTCGATTCCTTTTGATC 59.420 40.000 3.71 0.00 0.00 2.92
3232 4589 5.350365 CCGTTAACTCGATTCCTTTTGATCA 59.650 40.000 3.71 0.00 0.00 2.92
3233 4590 6.128391 CCGTTAACTCGATTCCTTTTGATCAA 60.128 38.462 3.38 3.38 0.00 2.57
3234 4591 7.295201 CGTTAACTCGATTCCTTTTGATCAAA 58.705 34.615 16.91 16.91 0.00 2.69
3235 4592 7.478667 CGTTAACTCGATTCCTTTTGATCAAAG 59.521 37.037 19.64 13.84 41.64 2.77
3236 4593 5.302357 ACTCGATTCCTTTTGATCAAAGC 57.698 39.130 19.64 1.78 40.75 3.51
3237 4594 5.006386 ACTCGATTCCTTTTGATCAAAGCT 58.994 37.500 19.64 5.56 40.75 3.74
3238 4595 6.173339 ACTCGATTCCTTTTGATCAAAGCTA 58.827 36.000 19.64 5.98 40.75 3.32
3239 4596 6.655003 ACTCGATTCCTTTTGATCAAAGCTAA 59.345 34.615 19.64 14.83 40.75 3.09
3240 4597 7.337942 ACTCGATTCCTTTTGATCAAAGCTAAT 59.662 33.333 19.64 18.13 40.75 1.73
3241 4598 8.055279 TCGATTCCTTTTGATCAAAGCTAATT 57.945 30.769 19.64 6.22 40.75 1.40
3242 4599 8.522830 TCGATTCCTTTTGATCAAAGCTAATTT 58.477 29.630 19.64 4.77 40.75 1.82
3243 4600 9.143631 CGATTCCTTTTGATCAAAGCTAATTTT 57.856 29.630 19.64 3.44 40.75 1.82
3245 4602 7.656707 TCCTTTTGATCAAAGCTAATTTTGC 57.343 32.000 19.64 0.00 40.75 3.68
3246 4603 7.215789 TCCTTTTGATCAAAGCTAATTTTGCA 58.784 30.769 19.64 1.35 40.75 4.08
3247 4604 7.714377 TCCTTTTGATCAAAGCTAATTTTGCAA 59.286 29.630 19.64 0.00 40.75 4.08
3248 4605 8.508875 CCTTTTGATCAAAGCTAATTTTGCAAT 58.491 29.630 19.64 0.00 40.75 3.56
3249 4606 9.325150 CTTTTGATCAAAGCTAATTTTGCAATG 57.675 29.630 19.64 4.11 37.83 2.82
3250 4607 7.966246 TTGATCAAAGCTAATTTTGCAATGT 57.034 28.000 5.45 0.00 37.83 2.71
3251 4608 9.486497 TTTGATCAAAGCTAATTTTGCAATGTA 57.514 25.926 16.91 0.00 37.83 2.29
3252 4609 8.692110 TGATCAAAGCTAATTTTGCAATGTAG 57.308 30.769 0.00 3.66 37.83 2.74
3253 4610 7.760794 TGATCAAAGCTAATTTTGCAATGTAGG 59.239 33.333 0.00 0.00 37.83 3.18
3254 4611 5.868801 TCAAAGCTAATTTTGCAATGTAGGC 59.131 36.000 0.00 3.03 37.83 3.93
3255 4612 5.404466 AAGCTAATTTTGCAATGTAGGCA 57.596 34.783 0.00 0.00 40.00 4.75
3272 4629 3.004752 GGCAACTGGATGAGGTTATGT 57.995 47.619 0.00 0.00 0.00 2.29
3273 4630 4.150897 GGCAACTGGATGAGGTTATGTA 57.849 45.455 0.00 0.00 0.00 2.29
3274 4631 3.877508 GGCAACTGGATGAGGTTATGTAC 59.122 47.826 0.00 0.00 0.00 2.90
3275 4632 4.513442 GCAACTGGATGAGGTTATGTACA 58.487 43.478 0.00 0.00 0.00 2.90
3276 4633 4.941263 GCAACTGGATGAGGTTATGTACAA 59.059 41.667 0.00 0.00 0.00 2.41
3277 4634 5.590259 GCAACTGGATGAGGTTATGTACAAT 59.410 40.000 0.00 0.00 0.00 2.71
3278 4635 6.765989 GCAACTGGATGAGGTTATGTACAATA 59.234 38.462 0.00 0.00 0.00 1.90
3279 4636 7.041780 GCAACTGGATGAGGTTATGTACAATAG 60.042 40.741 0.00 0.00 0.00 1.73
3280 4637 7.676683 ACTGGATGAGGTTATGTACAATAGT 57.323 36.000 0.00 0.00 0.00 2.12
3281 4638 7.500992 ACTGGATGAGGTTATGTACAATAGTG 58.499 38.462 0.00 0.00 0.00 2.74
3282 4639 7.125811 ACTGGATGAGGTTATGTACAATAGTGT 59.874 37.037 0.00 0.00 42.09 3.55
3283 4640 7.272244 TGGATGAGGTTATGTACAATAGTGTG 58.728 38.462 5.98 0.00 38.82 3.82
3284 4641 6.706270 GGATGAGGTTATGTACAATAGTGTGG 59.294 42.308 5.98 0.00 38.82 4.17
3285 4642 6.614694 TGAGGTTATGTACAATAGTGTGGT 57.385 37.500 5.98 0.00 38.82 4.16
3286 4643 6.636705 TGAGGTTATGTACAATAGTGTGGTC 58.363 40.000 5.98 0.00 38.82 4.02
3287 4644 6.439375 TGAGGTTATGTACAATAGTGTGGTCT 59.561 38.462 5.98 0.00 38.82 3.85
3288 4645 7.616542 TGAGGTTATGTACAATAGTGTGGTCTA 59.383 37.037 5.98 0.00 38.82 2.59
3289 4646 8.548880 AGGTTATGTACAATAGTGTGGTCTAT 57.451 34.615 5.98 0.00 38.82 1.98
3290 4647 8.989131 AGGTTATGTACAATAGTGTGGTCTATT 58.011 33.333 5.98 0.00 40.06 1.73
3291 4648 9.609346 GGTTATGTACAATAGTGTGGTCTATTT 57.391 33.333 5.98 0.00 38.19 1.40
3295 4652 8.771920 TGTACAATAGTGTGGTCTATTTTCTG 57.228 34.615 5.98 0.00 38.19 3.02
3296 4653 8.372459 TGTACAATAGTGTGGTCTATTTTCTGT 58.628 33.333 5.98 0.00 38.19 3.41
3297 4654 9.216117 GTACAATAGTGTGGTCTATTTTCTGTT 57.784 33.333 5.98 0.00 38.19 3.16
3298 4655 8.691661 ACAATAGTGTGGTCTATTTTCTGTTT 57.308 30.769 0.00 0.00 38.19 2.83
3299 4656 8.784043 ACAATAGTGTGGTCTATTTTCTGTTTC 58.216 33.333 0.00 0.00 38.19 2.78
3300 4657 9.003658 CAATAGTGTGGTCTATTTTCTGTTTCT 57.996 33.333 0.00 0.00 38.19 2.52
3301 4658 6.867662 AGTGTGGTCTATTTTCTGTTTCTG 57.132 37.500 0.00 0.00 0.00 3.02
3302 4659 6.591935 AGTGTGGTCTATTTTCTGTTTCTGA 58.408 36.000 0.00 0.00 0.00 3.27
3303 4660 7.054124 AGTGTGGTCTATTTTCTGTTTCTGAA 58.946 34.615 0.00 0.00 0.00 3.02
3304 4661 7.012421 AGTGTGGTCTATTTTCTGTTTCTGAAC 59.988 37.037 0.00 0.00 36.29 3.18
3305 4662 7.012421 GTGTGGTCTATTTTCTGTTTCTGAACT 59.988 37.037 0.00 0.00 36.70 3.01
3306 4663 7.226720 TGTGGTCTATTTTCTGTTTCTGAACTC 59.773 37.037 0.00 0.00 36.70 3.01
3307 4664 7.442666 GTGGTCTATTTTCTGTTTCTGAACTCT 59.557 37.037 0.00 0.00 36.70 3.24
3308 4665 8.647796 TGGTCTATTTTCTGTTTCTGAACTCTA 58.352 33.333 0.00 0.00 36.70 2.43
3309 4666 9.660180 GGTCTATTTTCTGTTTCTGAACTCTAT 57.340 33.333 0.00 0.00 36.70 1.98
3313 4670 8.833231 ATTTTCTGTTTCTGAACTCTATTCGA 57.167 30.769 0.00 0.00 36.70 3.71
3314 4671 8.657074 TTTTCTGTTTCTGAACTCTATTCGAA 57.343 30.769 0.00 0.00 36.70 3.71
3315 4672 7.639162 TTCTGTTTCTGAACTCTATTCGAAC 57.361 36.000 0.00 0.00 36.70 3.95
3316 4673 6.745116 TCTGTTTCTGAACTCTATTCGAACA 58.255 36.000 0.00 0.00 36.70 3.18
3317 4674 7.207383 TCTGTTTCTGAACTCTATTCGAACAA 58.793 34.615 0.00 0.00 36.70 2.83
3318 4675 7.169308 TCTGTTTCTGAACTCTATTCGAACAAC 59.831 37.037 0.00 0.00 36.70 3.32
3319 4676 6.074516 TGTTTCTGAACTCTATTCGAACAACG 60.075 38.462 0.00 0.00 38.75 4.10
3320 4677 5.117355 TCTGAACTCTATTCGAACAACGT 57.883 39.130 0.00 0.00 43.13 3.99
3321 4678 5.526115 TCTGAACTCTATTCGAACAACGTT 58.474 37.500 0.00 0.00 43.13 3.99
3322 4679 5.628193 TCTGAACTCTATTCGAACAACGTTC 59.372 40.000 17.98 17.98 43.13 3.95
3323 4680 5.283294 TGAACTCTATTCGAACAACGTTCA 58.717 37.500 21.16 21.16 43.13 3.18
3324 4681 5.401376 TGAACTCTATTCGAACAACGTTCAG 59.599 40.000 21.16 0.00 43.13 3.02
3325 4682 4.868067 ACTCTATTCGAACAACGTTCAGT 58.132 39.130 0.00 0.00 43.13 3.41
3326 4683 4.916249 ACTCTATTCGAACAACGTTCAGTC 59.084 41.667 0.00 0.00 43.13 3.51
3327 4684 3.910170 TCTATTCGAACAACGTTCAGTCG 59.090 43.478 15.20 15.20 43.13 4.18
3328 4685 2.191815 TTCGAACAACGTTCAGTCGA 57.808 45.000 18.42 18.42 43.13 4.20
3329 4686 2.410785 TCGAACAACGTTCAGTCGAT 57.589 45.000 18.42 0.00 43.13 3.59
3330 4687 2.734670 TCGAACAACGTTCAGTCGATT 58.265 42.857 18.42 0.00 43.13 3.34
3331 4688 3.117794 TCGAACAACGTTCAGTCGATTT 58.882 40.909 18.42 0.00 43.13 2.17
3332 4689 3.552699 TCGAACAACGTTCAGTCGATTTT 59.447 39.130 18.42 0.00 43.13 1.82
3333 4690 3.653113 CGAACAACGTTCAGTCGATTTTG 59.347 43.478 15.96 0.00 37.22 2.44
3334 4691 4.584394 GAACAACGTTCAGTCGATTTTGT 58.416 39.130 0.00 0.00 32.10 2.83
3335 4692 4.609691 ACAACGTTCAGTCGATTTTGTT 57.390 36.364 0.00 0.00 28.44 2.83
3336 4693 4.339429 ACAACGTTCAGTCGATTTTGTTG 58.661 39.130 0.00 13.17 40.78 3.33
3340 4697 3.177643 CGTTCAGTCGATTTTGTTGTTGC 59.822 43.478 0.00 0.00 0.00 4.17
3421 4778 3.511934 ACAGGTACACAAGATCTCAGTCC 59.488 47.826 0.00 0.00 0.00 3.85
3466 4823 2.060980 GCGAGTCCAGTCCAGGGAT 61.061 63.158 0.00 0.00 36.67 3.85
3574 4931 2.765807 CTGCCCCTCATCGTCCCT 60.766 66.667 0.00 0.00 0.00 4.20
3623 4980 0.814410 CCTAGTCTAGCGACGCTCCA 60.814 60.000 28.21 11.36 44.93 3.86
3872 5241 7.908827 TTTTACTTGTTTGGTATCGATGCTA 57.091 32.000 13.38 4.26 0.00 3.49
3931 5300 5.762179 TTCTGGGTAATGAGTCAATCTGT 57.238 39.130 0.00 0.00 0.00 3.41
3932 5301 5.089970 TCTGGGTAATGAGTCAATCTGTG 57.910 43.478 0.00 0.00 0.00 3.66
3933 5302 4.532126 TCTGGGTAATGAGTCAATCTGTGT 59.468 41.667 0.00 0.00 0.00 3.72
3934 5303 4.578871 TGGGTAATGAGTCAATCTGTGTG 58.421 43.478 0.00 0.00 0.00 3.82
3935 5304 4.041567 TGGGTAATGAGTCAATCTGTGTGT 59.958 41.667 0.00 0.00 0.00 3.72
3936 5305 4.393062 GGGTAATGAGTCAATCTGTGTGTG 59.607 45.833 0.00 0.00 0.00 3.82
3968 5337 2.755103 CACCATTGGTAGAAAAGGAGCC 59.245 50.000 8.31 0.00 32.11 4.70
4005 5381 2.310538 CTGCTTCTTCCCTTTGTGGTT 58.689 47.619 0.00 0.00 0.00 3.67
4006 5382 2.031120 TGCTTCTTCCCTTTGTGGTTG 58.969 47.619 0.00 0.00 0.00 3.77
4007 5383 2.031870 GCTTCTTCCCTTTGTGGTTGT 58.968 47.619 0.00 0.00 0.00 3.32
4086 5462 9.906660 GTTCAAAATTTATAGACCACATCACAA 57.093 29.630 0.00 0.00 0.00 3.33
4107 5483 7.069578 TCACAAGTTCATAATAGGTACTCCCTC 59.930 40.741 0.00 0.00 44.81 4.30
4108 5484 6.326843 ACAAGTTCATAATAGGTACTCCCTCC 59.673 42.308 0.00 0.00 44.81 4.30
4109 5485 5.078256 AGTTCATAATAGGTACTCCCTCCG 58.922 45.833 0.00 0.00 44.81 4.63
4110 5486 5.075493 GTTCATAATAGGTACTCCCTCCGA 58.925 45.833 0.00 0.00 44.81 4.55
4150 5526 3.256136 AGTGTCGTGGTTTTGGTTCAAAA 59.744 39.130 2.14 2.14 40.41 2.44
4151 5527 3.988517 GTGTCGTGGTTTTGGTTCAAAAA 59.011 39.130 7.29 0.00 43.50 1.94
4240 6221 0.517316 CCAGAAACCCGAAGAAAGCG 59.483 55.000 0.00 0.00 0.00 4.68
4316 6297 7.280428 TGTCAAACTTAAAACTTATGTCCGTGA 59.720 33.333 0.00 0.00 0.00 4.35
4331 6312 2.685388 TCCGTGAACTTGCAAATTGTGA 59.315 40.909 0.00 0.00 0.00 3.58
4352 6333 1.520787 GTACGCCCCATCAGTTCCG 60.521 63.158 0.00 0.00 0.00 4.30
4356 6337 1.153229 GCCCCATCAGTTCCGTACC 60.153 63.158 0.00 0.00 0.00 3.34
4357 6338 1.143183 CCCCATCAGTTCCGTACCG 59.857 63.158 0.00 0.00 0.00 4.02
4386 6370 5.925969 ACTTTTTACGGCCATTGAAATTGAG 59.074 36.000 2.24 0.00 0.00 3.02
4487 6480 2.625314 CGCTCTAGGTTGGATGATCTCA 59.375 50.000 0.00 0.00 0.00 3.27
4526 6519 5.989777 GTCAAGTCTGCCAAGTAAGAAACTA 59.010 40.000 0.00 0.00 37.50 2.24
4529 6522 5.785243 AGTCTGCCAAGTAAGAAACTACTC 58.215 41.667 0.00 0.00 37.50 2.59
4530 6523 5.304614 AGTCTGCCAAGTAAGAAACTACTCA 59.695 40.000 0.00 0.00 37.50 3.41
4531 6524 5.635700 GTCTGCCAAGTAAGAAACTACTCAG 59.364 44.000 0.00 0.00 37.50 3.35
4595 6596 8.778059 AGTTTGTATTACCTCCATCCAGAATTA 58.222 33.333 0.00 0.00 0.00 1.40
4613 6614 8.188799 CCAGAATTAGTTGTCTCAGATACGTAA 58.811 37.037 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.179233 GCACCGTTCGATTTTCGGAC 60.179 55.000 19.87 0.00 44.58 4.79
6 7 0.600518 TGCACCGTTCGATTTTCGGA 60.601 50.000 19.87 1.90 46.05 4.55
8 9 0.784250 CGTGCACCGTTCGATTTTCG 60.784 55.000 12.15 0.00 42.10 3.46
9 10 1.058057 GCGTGCACCGTTCGATTTTC 61.058 55.000 12.15 0.00 39.32 2.29
10 11 1.082366 GCGTGCACCGTTCGATTTT 60.082 52.632 12.15 0.00 39.32 1.82
11 12 2.554272 GCGTGCACCGTTCGATTT 59.446 55.556 12.15 0.00 39.32 2.17
12 13 3.773630 CGCGTGCACCGTTCGATT 61.774 61.111 12.15 0.00 39.32 3.34
13 14 4.710695 TCGCGTGCACCGTTCGAT 62.711 61.111 21.61 0.00 39.32 3.59
14 15 4.927444 TTCGCGTGCACCGTTCGA 62.927 61.111 21.61 16.97 39.32 3.71
15 16 2.757946 AATTTCGCGTGCACCGTTCG 62.758 55.000 21.61 15.31 39.32 3.95
16 17 0.659123 AAATTTCGCGTGCACCGTTC 60.659 50.000 21.61 5.55 39.32 3.95
17 18 0.587285 TAAATTTCGCGTGCACCGTT 59.413 45.000 21.61 13.74 39.32 4.44
18 19 0.800012 ATAAATTTCGCGTGCACCGT 59.200 45.000 21.61 9.31 39.32 4.83
19 20 1.179332 CATAAATTTCGCGTGCACCG 58.821 50.000 12.15 15.73 40.40 4.94
20 21 1.544686 CCATAAATTTCGCGTGCACC 58.455 50.000 12.15 3.09 0.00 5.01
21 22 1.544686 CCCATAAATTTCGCGTGCAC 58.455 50.000 6.82 6.82 0.00 4.57
22 23 0.453793 CCCCATAAATTTCGCGTGCA 59.546 50.000 5.77 0.00 0.00 4.57
23 24 0.736053 TCCCCATAAATTTCGCGTGC 59.264 50.000 5.77 0.00 0.00 5.34
24 25 3.181491 ACATTCCCCATAAATTTCGCGTG 60.181 43.478 5.77 0.00 0.00 5.34
25 26 3.020984 ACATTCCCCATAAATTTCGCGT 58.979 40.909 5.77 0.00 0.00 6.01
26 27 3.066064 TCACATTCCCCATAAATTTCGCG 59.934 43.478 0.00 0.00 0.00 5.87
27 28 4.647424 TCACATTCCCCATAAATTTCGC 57.353 40.909 0.00 0.00 0.00 4.70
28 29 6.449635 TCTTCACATTCCCCATAAATTTCG 57.550 37.500 0.00 0.00 0.00 3.46
29 30 8.477256 TGAATCTTCACATTCCCCATAAATTTC 58.523 33.333 0.00 0.00 32.51 2.17
30 31 8.378115 TGAATCTTCACATTCCCCATAAATTT 57.622 30.769 0.00 0.00 32.51 1.82
31 32 7.976414 TGAATCTTCACATTCCCCATAAATT 57.024 32.000 0.00 0.00 32.51 1.82
32 33 7.234166 GGATGAATCTTCACATTCCCCATAAAT 59.766 37.037 0.00 0.00 40.49 1.40
33 34 6.550854 GGATGAATCTTCACATTCCCCATAAA 59.449 38.462 0.00 0.00 40.49 1.40
34 35 6.070656 GGATGAATCTTCACATTCCCCATAA 58.929 40.000 0.00 0.00 40.49 1.90
35 36 5.134169 TGGATGAATCTTCACATTCCCCATA 59.866 40.000 8.04 0.00 40.49 2.74
36 37 4.079038 TGGATGAATCTTCACATTCCCCAT 60.079 41.667 8.04 0.00 40.49 4.00
37 38 3.269118 TGGATGAATCTTCACATTCCCCA 59.731 43.478 8.04 0.00 40.49 4.96
38 39 3.902218 TGGATGAATCTTCACATTCCCC 58.098 45.455 8.04 0.00 40.49 4.81
39 40 4.706476 TGTTGGATGAATCTTCACATTCCC 59.294 41.667 8.04 0.00 40.49 3.97
40 41 5.902613 TGTTGGATGAATCTTCACATTCC 57.097 39.130 0.00 0.00 40.49 3.01
41 42 6.095377 GGTTGTTGGATGAATCTTCACATTC 58.905 40.000 0.00 0.00 40.49 2.67
42 43 5.539574 TGGTTGTTGGATGAATCTTCACATT 59.460 36.000 0.00 0.00 40.49 2.71
43 44 5.047802 GTGGTTGTTGGATGAATCTTCACAT 60.048 40.000 0.00 0.00 40.49 3.21
44 45 4.278170 GTGGTTGTTGGATGAATCTTCACA 59.722 41.667 0.00 0.00 40.49 3.58
45 46 4.321230 GGTGGTTGTTGGATGAATCTTCAC 60.321 45.833 0.00 0.00 40.49 3.18
46 47 3.826157 GGTGGTTGTTGGATGAATCTTCA 59.174 43.478 0.00 0.00 42.14 3.02
47 48 3.826157 TGGTGGTTGTTGGATGAATCTTC 59.174 43.478 0.00 0.00 0.00 2.87
48 49 3.843422 TGGTGGTTGTTGGATGAATCTT 58.157 40.909 0.00 0.00 0.00 2.40
49 50 3.524095 TGGTGGTTGTTGGATGAATCT 57.476 42.857 0.00 0.00 0.00 2.40
50 51 3.306019 GGTTGGTGGTTGTTGGATGAATC 60.306 47.826 0.00 0.00 0.00 2.52
51 52 2.632512 GGTTGGTGGTTGTTGGATGAAT 59.367 45.455 0.00 0.00 0.00 2.57
52 53 2.035632 GGTTGGTGGTTGTTGGATGAA 58.964 47.619 0.00 0.00 0.00 2.57
73 74 5.579511 GCAAGAAGATGAACATTGGGATTTG 59.420 40.000 0.00 0.00 0.00 2.32
79 80 2.167075 GGGGCAAGAAGATGAACATTGG 59.833 50.000 0.00 0.00 0.00 3.16
82 83 2.579860 AGAGGGGCAAGAAGATGAACAT 59.420 45.455 0.00 0.00 0.00 2.71
96 97 1.518302 GAGGAAGACGAAGAGGGGC 59.482 63.158 0.00 0.00 0.00 5.80
101 102 0.516001 CGACACGAGGAAGACGAAGA 59.484 55.000 0.00 0.00 34.70 2.87
102 103 0.237761 ACGACACGAGGAAGACGAAG 59.762 55.000 0.00 0.00 34.70 3.79
103 104 0.236711 GACGACACGAGGAAGACGAA 59.763 55.000 0.00 0.00 34.70 3.85
105 106 1.509370 CGACGACACGAGGAAGACG 60.509 63.158 0.00 0.00 35.09 4.18
106 107 1.796749 GCGACGACACGAGGAAGAC 60.797 63.158 0.00 0.00 35.09 3.01
116 118 3.998672 GGTTGGAGGGCGACGACA 61.999 66.667 1.63 0.00 0.00 4.35
136 138 4.525949 GAGGGCGACGGTTAGGGC 62.526 72.222 0.00 0.00 0.00 5.19
160 162 0.034089 ATTGCGAAAGGGGAAGGGAG 60.034 55.000 0.00 0.00 0.00 4.30
165 167 0.250553 ACGTGATTGCGAAAGGGGAA 60.251 50.000 0.00 0.00 35.59 3.97
169 171 0.165944 GGTGACGTGATTGCGAAAGG 59.834 55.000 0.00 0.00 35.59 3.11
171 173 0.584396 GTGGTGACGTGATTGCGAAA 59.416 50.000 0.00 0.00 35.59 3.46
172 174 0.249699 AGTGGTGACGTGATTGCGAA 60.250 50.000 0.00 0.00 35.59 4.70
178 180 1.293498 GGCAGAGTGGTGACGTGAT 59.707 57.895 0.00 0.00 0.00 3.06
179 181 2.734591 GGCAGAGTGGTGACGTGA 59.265 61.111 0.00 0.00 0.00 4.35
180 182 2.357517 GGGCAGAGTGGTGACGTG 60.358 66.667 0.00 0.00 0.00 4.49
181 183 2.100879 GAAGGGCAGAGTGGTGACGT 62.101 60.000 0.00 0.00 0.00 4.34
182 184 1.374758 GAAGGGCAGAGTGGTGACG 60.375 63.158 0.00 0.00 0.00 4.35
184 186 0.842030 ATGGAAGGGCAGAGTGGTGA 60.842 55.000 0.00 0.00 0.00 4.02
186 188 1.903877 CGATGGAAGGGCAGAGTGGT 61.904 60.000 0.00 0.00 0.00 4.16
188 190 1.817099 GCGATGGAAGGGCAGAGTG 60.817 63.158 0.00 0.00 0.00 3.51
189 191 2.586792 GCGATGGAAGGGCAGAGT 59.413 61.111 0.00 0.00 0.00 3.24
190 192 2.203126 GGCGATGGAAGGGCAGAG 60.203 66.667 0.00 0.00 0.00 3.35
191 193 4.161295 CGGCGATGGAAGGGCAGA 62.161 66.667 0.00 0.00 0.00 4.26
195 197 4.473520 ACTGCGGCGATGGAAGGG 62.474 66.667 12.98 0.00 0.00 3.95
206 208 3.792047 CATGACGGTGCACTGCGG 61.792 66.667 25.67 10.51 0.00 5.69
209 211 3.434319 GGGCATGACGGTGCACTG 61.434 66.667 24.22 24.22 45.03 3.66
218 220 3.918253 TTGGGCGACAGGGCATGAC 62.918 63.158 5.99 0.00 44.56 3.06
232 235 1.153005 GAGCAGAGATGGCCTTGGG 60.153 63.158 3.32 0.00 0.00 4.12
253 256 2.983592 GAAAGTGGCGTGGGGGTG 60.984 66.667 0.00 0.00 0.00 4.61
254 257 4.280019 GGAAAGTGGCGTGGGGGT 62.280 66.667 0.00 0.00 0.00 4.95
257 260 1.106944 AAACAGGAAAGTGGCGTGGG 61.107 55.000 0.00 0.00 0.00 4.61
258 261 0.744281 AAAACAGGAAAGTGGCGTGG 59.256 50.000 0.00 0.00 0.00 4.94
260 263 1.029681 GGAAAACAGGAAAGTGGCGT 58.970 50.000 0.00 0.00 0.00 5.68
262 265 1.001706 GTCGGAAAACAGGAAAGTGGC 60.002 52.381 0.00 0.00 0.00 5.01
264 267 3.563808 TGATGTCGGAAAACAGGAAAGTG 59.436 43.478 0.00 0.00 31.50 3.16
267 270 3.948473 TGTTGATGTCGGAAAACAGGAAA 59.052 39.130 0.00 0.00 31.50 3.13
268 271 3.546724 TGTTGATGTCGGAAAACAGGAA 58.453 40.909 0.00 0.00 31.50 3.36
284 287 2.617788 GGTGCAGGTGTGGATATGTTGA 60.618 50.000 0.00 0.00 0.00 3.18
291 294 1.304282 GATGGGTGCAGGTGTGGAT 59.696 57.895 0.00 0.00 0.00 3.41
292 295 1.714011 TTGATGGGTGCAGGTGTGGA 61.714 55.000 0.00 0.00 0.00 4.02
298 301 2.751436 CGGGTTGATGGGTGCAGG 60.751 66.667 0.00 0.00 0.00 4.85
307 310 2.125106 GCGAGGAAGCGGGTTGAT 60.125 61.111 0.00 0.00 0.00 2.57
314 317 1.655329 CTAGGTAGGCGAGGAAGCG 59.345 63.158 0.00 0.00 38.18 4.68
361 364 3.480133 CCGGGAGATGGGGGTGAC 61.480 72.222 0.00 0.00 0.00 3.67
400 403 3.554692 GACGAGCGTTGATGCCGG 61.555 66.667 0.00 0.00 34.34 6.13
428 431 0.886490 GAAGATGGGGGCTATGTGCG 60.886 60.000 0.00 0.00 44.05 5.34
429 432 0.886490 CGAAGATGGGGGCTATGTGC 60.886 60.000 0.00 0.00 41.94 4.57
433 436 0.104934 AGGTCGAAGATGGGGGCTAT 60.105 55.000 0.00 0.00 40.67 2.97
435 438 2.041265 AGGTCGAAGATGGGGGCT 59.959 61.111 0.00 0.00 40.67 5.19
437 440 0.394565 GATGAGGTCGAAGATGGGGG 59.605 60.000 0.00 0.00 40.67 5.40
449 452 1.633432 TGGTCGATTTTGGGATGAGGT 59.367 47.619 0.00 0.00 0.00 3.85
458 461 2.574212 GCGCGCTGGTCGATTTTG 60.574 61.111 26.67 0.00 41.67 2.44
471 474 2.507193 CCCATGAATTTTGCGCGCG 61.507 57.895 28.44 28.44 0.00 6.86
475 478 6.030849 TCGTAATTTACCCATGAATTTTGCG 58.969 36.000 0.00 0.00 0.00 4.85
484 487 4.909696 TGCCAATCGTAATTTACCCATG 57.090 40.909 1.04 0.00 0.00 3.66
487 490 7.266922 TCTATTTGCCAATCGTAATTTACCC 57.733 36.000 1.04 0.00 0.00 3.69
497 500 9.734620 TTTTCTATTGATTCTATTTGCCAATCG 57.265 29.630 0.00 0.00 30.35 3.34
551 554 8.090788 AGGAACAGTTTTATGAGCCTATTCTA 57.909 34.615 0.00 0.00 0.00 2.10
553 556 6.261158 GGAGGAACAGTTTTATGAGCCTATTC 59.739 42.308 0.00 0.00 30.97 1.75
554 557 6.122964 GGAGGAACAGTTTTATGAGCCTATT 58.877 40.000 0.00 0.00 30.97 1.73
558 561 3.686016 TGGAGGAACAGTTTTATGAGCC 58.314 45.455 0.00 0.00 0.00 4.70
567 570 1.067295 TGAGGCATGGAGGAACAGTT 58.933 50.000 0.00 0.00 0.00 3.16
568 571 1.293062 ATGAGGCATGGAGGAACAGT 58.707 50.000 0.00 0.00 0.00 3.55
569 572 2.426024 CAAATGAGGCATGGAGGAACAG 59.574 50.000 0.00 0.00 0.00 3.16
570 573 2.225091 ACAAATGAGGCATGGAGGAACA 60.225 45.455 0.00 0.00 0.00 3.18
571 574 2.165030 CACAAATGAGGCATGGAGGAAC 59.835 50.000 0.00 0.00 0.00 3.62
572 575 2.225091 ACACAAATGAGGCATGGAGGAA 60.225 45.455 0.00 0.00 0.00 3.36
585 594 3.690460 AGAGGGAAAGGCTACACAAATG 58.310 45.455 0.00 0.00 0.00 2.32
667 676 0.971386 CATGGTTGCTTGAGGGCTTT 59.029 50.000 0.00 0.00 0.00 3.51
933 947 3.430651 GGATGGTTCAGAGAGAGAAGCTG 60.431 52.174 0.00 0.00 42.35 4.24
964 988 2.283173 CAAGAACCCCCTGTGGCC 60.283 66.667 0.00 0.00 0.00 5.36
983 1013 0.465097 CATGGCTCTTCTCCGGCAAT 60.465 55.000 0.00 0.00 39.23 3.56
1109 1139 4.590222 AGCAACACCCAGAATCAAGAAAAT 59.410 37.500 0.00 0.00 0.00 1.82
1131 1172 8.502387 CAGGAAAAATCAAGTACAGAAAGAGAG 58.498 37.037 0.00 0.00 0.00 3.20
1136 1177 6.369629 TCCCAGGAAAAATCAAGTACAGAAA 58.630 36.000 0.00 0.00 0.00 2.52
1154 1195 2.675658 TTCCACTCCTTTTTCCCAGG 57.324 50.000 0.00 0.00 0.00 4.45
1217 1258 6.141053 GCAAATTGCATCAAACATGTCAAAAC 59.859 34.615 13.73 0.00 44.26 2.43
1242 1283 2.021457 GACATGGATTTAACACCCCCG 58.979 52.381 0.00 0.00 0.00 5.73
1263 1304 2.350899 TTCATCAAAACATGCCTGCG 57.649 45.000 0.00 0.00 0.00 5.18
1363 1404 1.144503 GAGGATGATTGGAGCCATGGT 59.855 52.381 14.67 0.00 0.00 3.55
1449 1490 3.936372 TTGTAGACAAGAACCTCGAGG 57.064 47.619 30.11 30.11 42.17 4.63
1489 1531 1.255667 AATTTGAGGGCCTGCAGCAG 61.256 55.000 12.95 16.23 46.50 4.24
1619 1662 3.403038 CCTTTCGATGGTGGATATGGAC 58.597 50.000 0.00 0.00 0.00 4.02
1687 1734 5.279156 CCTGAAACTGAAGAATTTTCCCCAG 60.279 44.000 7.55 7.55 34.97 4.45
1716 1764 0.514255 CACGGTGTCAGTGCATGAAG 59.486 55.000 0.00 0.00 40.43 3.02
1720 1768 4.047834 CACACGGTGTCAGTGCAT 57.952 55.556 11.54 0.00 42.94 3.96
1733 1781 1.333258 GCACGTCAGAAAGAAGCACAC 60.333 52.381 0.00 0.00 0.00 3.82
1814 1862 0.695347 CCCTTTCTCCTTGCACTCCT 59.305 55.000 0.00 0.00 0.00 3.69
1815 1863 0.402121 ACCCTTTCTCCTTGCACTCC 59.598 55.000 0.00 0.00 0.00 3.85
1818 1866 0.178990 ACCACCCTTTCTCCTTGCAC 60.179 55.000 0.00 0.00 0.00 4.57
1830 1878 4.938756 TCCCCCTTGCACCACCCT 62.939 66.667 0.00 0.00 0.00 4.34
2167 2217 2.046892 AAAGCTGTCGCCGCTCAT 60.047 55.556 0.00 0.00 36.56 2.90
2225 2275 5.009610 TGAAAAGGAACTGCACCAATAACTC 59.990 40.000 0.00 0.00 40.86 3.01
2236 2286 2.803133 GCCAAGGTTGAAAAGGAACTGC 60.803 50.000 0.00 0.00 40.86 4.40
2243 2293 0.385390 ACAGCGCCAAGGTTGAAAAG 59.615 50.000 2.29 0.00 0.00 2.27
2284 2335 1.831736 CCTACCCCTACCAACACTGAG 59.168 57.143 0.00 0.00 0.00 3.35
2308 2359 3.547746 TGTTGGGTTGTTGAACTACTCC 58.452 45.455 7.29 8.43 32.15 3.85
2369 2423 4.929146 AAGTAGGGCTAAATGGAGTTGT 57.071 40.909 0.00 0.00 0.00 3.32
2510 2565 1.936547 CTTCCAGCCAACTAATCGAGC 59.063 52.381 0.00 0.00 0.00 5.03
2513 2568 1.667724 CAGCTTCCAGCCAACTAATCG 59.332 52.381 0.00 0.00 43.77 3.34
2616 2679 4.175787 ACCGAATGTGTCTCTTGAGTAC 57.824 45.455 0.00 0.00 0.00 2.73
2647 2710 9.243105 ACTCAAACATAAATACAGTGCCTAATT 57.757 29.630 0.00 0.00 0.00 1.40
2649 2712 8.630054 AACTCAAACATAAATACAGTGCCTAA 57.370 30.769 0.00 0.00 0.00 2.69
2651 2714 7.524717 AAACTCAAACATAAATACAGTGCCT 57.475 32.000 0.00 0.00 0.00 4.75
2656 2719 9.301153 GCCCATTAAACTCAAACATAAATACAG 57.699 33.333 0.00 0.00 0.00 2.74
2657 2720 8.807118 TGCCCATTAAACTCAAACATAAATACA 58.193 29.630 0.00 0.00 0.00 2.29
2658 2721 9.301153 CTGCCCATTAAACTCAAACATAAATAC 57.699 33.333 0.00 0.00 0.00 1.89
2659 2722 9.030452 ACTGCCCATTAAACTCAAACATAAATA 57.970 29.630 0.00 0.00 0.00 1.40
2660 2723 7.906327 ACTGCCCATTAAACTCAAACATAAAT 58.094 30.769 0.00 0.00 0.00 1.40
2662 2725 6.909550 ACTGCCCATTAAACTCAAACATAA 57.090 33.333 0.00 0.00 0.00 1.90
2666 2729 4.744631 CACAACTGCCCATTAAACTCAAAC 59.255 41.667 0.00 0.00 0.00 2.93
2742 2812 8.528643 TCCATACCACTGATAAAATATAGTCCG 58.471 37.037 0.00 0.00 0.00 4.79
2827 2897 3.057386 TGTGCTATTGACAATTGCCACTG 60.057 43.478 25.14 0.00 38.58 3.66
2854 2924 2.356135 TGCGCTTATCCCTTCAAGTTC 58.644 47.619 9.73 0.00 0.00 3.01
2915 4271 5.299279 TGCCAGCTAAGGAAACATAATTAGC 59.701 40.000 7.53 7.53 46.68 3.09
3017 4373 7.017645 GCAGCCAGTTCATTATCATTATAACG 58.982 38.462 0.00 0.00 30.42 3.18
3040 4397 3.411446 CTCCCAACATTGTACTGAAGCA 58.589 45.455 0.00 0.00 0.00 3.91
3047 4404 2.778299 TGACTGCTCCCAACATTGTAC 58.222 47.619 0.00 0.00 0.00 2.90
3052 4409 1.843368 CCATTGACTGCTCCCAACAT 58.157 50.000 0.00 0.00 0.00 2.71
3060 4417 3.008375 TGTTAGAGAAGCCATTGACTGCT 59.992 43.478 0.00 0.00 40.17 4.24
3063 4420 3.008375 TGCTGTTAGAGAAGCCATTGACT 59.992 43.478 0.00 0.00 38.71 3.41
3078 4435 6.092670 GCATCTTGTCTGAAGTAATGCTGTTA 59.907 38.462 8.31 0.00 36.12 2.41
3103 4460 7.414873 ATCTACAGATACAATTGCAGCAAACTG 60.415 37.037 12.97 14.68 38.86 3.16
3104 4461 5.939883 TCTACAGATACAATTGCAGCAAACT 59.060 36.000 12.97 0.00 0.00 2.66
3105 4462 6.182039 TCTACAGATACAATTGCAGCAAAC 57.818 37.500 12.97 0.34 0.00 2.93
3119 4476 9.263446 ACCAGTTACCAAAAGTATCTACAGATA 57.737 33.333 0.00 0.00 36.05 1.98
3120 4477 8.147244 ACCAGTTACCAAAAGTATCTACAGAT 57.853 34.615 0.00 0.00 38.51 2.90
3121 4478 7.453752 AGACCAGTTACCAAAAGTATCTACAGA 59.546 37.037 0.00 0.00 31.15 3.41
3122 4479 7.612677 AGACCAGTTACCAAAAGTATCTACAG 58.387 38.462 0.00 0.00 31.15 2.74
3123 4480 7.549147 AGACCAGTTACCAAAAGTATCTACA 57.451 36.000 0.00 0.00 31.15 2.74
3124 4481 9.747293 GATAGACCAGTTACCAAAAGTATCTAC 57.253 37.037 0.00 0.00 31.15 2.59
3125 4482 8.627403 CGATAGACCAGTTACCAAAAGTATCTA 58.373 37.037 0.00 0.00 39.76 1.98
3126 4483 7.490000 CGATAGACCAGTTACCAAAAGTATCT 58.510 38.462 0.00 0.00 39.76 1.98
3127 4484 6.200475 GCGATAGACCAGTTACCAAAAGTATC 59.800 42.308 0.00 0.00 39.76 2.24
3128 4485 6.047231 GCGATAGACCAGTTACCAAAAGTAT 58.953 40.000 0.00 0.00 39.76 2.12
3129 4486 5.186409 AGCGATAGACCAGTTACCAAAAGTA 59.814 40.000 0.00 0.00 39.76 2.24
3130 4487 4.020485 AGCGATAGACCAGTTACCAAAAGT 60.020 41.667 0.00 0.00 39.76 2.66
3131 4488 4.504858 AGCGATAGACCAGTTACCAAAAG 58.495 43.478 0.00 0.00 39.76 2.27
3132 4489 4.546829 AGCGATAGACCAGTTACCAAAA 57.453 40.909 0.00 0.00 39.76 2.44
3133 4490 5.864418 ATAGCGATAGACCAGTTACCAAA 57.136 39.130 0.00 0.00 39.76 3.28
3134 4491 5.864418 AATAGCGATAGACCAGTTACCAA 57.136 39.130 0.00 0.00 39.76 3.67
3135 4492 5.048224 GCTAATAGCGATAGACCAGTTACCA 60.048 44.000 0.00 0.00 39.76 3.25
3136 4493 5.400703 GCTAATAGCGATAGACCAGTTACC 58.599 45.833 0.00 0.00 39.76 2.85
3137 4494 5.183522 AGGCTAATAGCGATAGACCAGTTAC 59.816 44.000 6.15 0.00 43.62 2.50
3138 4495 5.322754 AGGCTAATAGCGATAGACCAGTTA 58.677 41.667 6.15 0.00 43.62 2.24
3139 4496 4.153411 AGGCTAATAGCGATAGACCAGTT 58.847 43.478 6.15 0.00 43.62 3.16
3140 4497 3.768878 AGGCTAATAGCGATAGACCAGT 58.231 45.455 6.15 0.00 43.62 4.00
3141 4498 4.489810 CAAGGCTAATAGCGATAGACCAG 58.510 47.826 6.15 0.00 43.62 4.00
3142 4499 3.306088 GCAAGGCTAATAGCGATAGACCA 60.306 47.826 6.15 0.00 43.62 4.02
3143 4500 3.254892 GCAAGGCTAATAGCGATAGACC 58.745 50.000 6.15 0.00 43.62 3.85
3144 4501 3.914312 TGCAAGGCTAATAGCGATAGAC 58.086 45.455 6.15 0.00 43.62 2.59
3145 4502 3.574396 ACTGCAAGGCTAATAGCGATAGA 59.426 43.478 6.15 0.00 43.62 1.98
3146 4503 3.677121 CACTGCAAGGCTAATAGCGATAG 59.323 47.826 6.15 3.19 43.62 2.08
3147 4504 3.554960 CCACTGCAAGGCTAATAGCGATA 60.555 47.826 6.15 0.00 43.62 2.92
3148 4505 2.487934 CACTGCAAGGCTAATAGCGAT 58.512 47.619 6.15 0.00 43.62 4.58
3149 4506 1.473257 CCACTGCAAGGCTAATAGCGA 60.473 52.381 6.15 0.00 43.62 4.93
3150 4507 0.940126 CCACTGCAAGGCTAATAGCG 59.060 55.000 6.15 0.00 43.62 4.26
3164 4521 4.680237 TTCTGCGTCGGGCCACTG 62.680 66.667 4.39 0.00 42.61 3.66
3165 4522 2.748058 ATTTTCTGCGTCGGGCCACT 62.748 55.000 4.39 0.00 42.61 4.00
3166 4523 1.862602 AATTTTCTGCGTCGGGCCAC 61.863 55.000 4.39 0.00 42.61 5.01
3167 4524 1.602323 AATTTTCTGCGTCGGGCCA 60.602 52.632 4.39 0.00 42.61 5.36
3168 4525 1.154035 CAATTTTCTGCGTCGGGCC 60.154 57.895 0.00 0.00 42.61 5.80
3169 4526 0.454452 GACAATTTTCTGCGTCGGGC 60.454 55.000 0.00 0.00 43.96 6.13
3170 4527 0.871722 TGACAATTTTCTGCGTCGGG 59.128 50.000 0.00 0.00 0.00 5.14
3171 4528 2.032030 ACTTGACAATTTTCTGCGTCGG 60.032 45.455 0.00 0.00 0.00 4.79
3172 4529 3.253371 ACTTGACAATTTTCTGCGTCG 57.747 42.857 0.00 0.00 0.00 5.12
3173 4530 5.625311 CCTTAACTTGACAATTTTCTGCGTC 59.375 40.000 0.00 0.00 0.00 5.19
3174 4531 5.507315 CCCTTAACTTGACAATTTTCTGCGT 60.507 40.000 0.00 0.00 0.00 5.24
3175 4532 4.917415 CCCTTAACTTGACAATTTTCTGCG 59.083 41.667 0.00 0.00 0.00 5.18
3176 4533 6.084326 TCCCTTAACTTGACAATTTTCTGC 57.916 37.500 0.00 0.00 0.00 4.26
3177 4534 7.940850 TCTTCCCTTAACTTGACAATTTTCTG 58.059 34.615 0.00 0.00 0.00 3.02
3178 4535 8.533569 TTCTTCCCTTAACTTGACAATTTTCT 57.466 30.769 0.00 0.00 0.00 2.52
3179 4536 7.867909 CCTTCTTCCCTTAACTTGACAATTTTC 59.132 37.037 0.00 0.00 0.00 2.29
3180 4537 7.344612 ACCTTCTTCCCTTAACTTGACAATTTT 59.655 33.333 0.00 0.00 0.00 1.82
3181 4538 6.839134 ACCTTCTTCCCTTAACTTGACAATTT 59.161 34.615 0.00 0.00 0.00 1.82
3182 4539 6.373759 ACCTTCTTCCCTTAACTTGACAATT 58.626 36.000 0.00 0.00 0.00 2.32
3183 4540 5.953571 ACCTTCTTCCCTTAACTTGACAAT 58.046 37.500 0.00 0.00 0.00 2.71
3184 4541 5.382664 ACCTTCTTCCCTTAACTTGACAA 57.617 39.130 0.00 0.00 0.00 3.18
3185 4542 5.374071 GAACCTTCTTCCCTTAACTTGACA 58.626 41.667 0.00 0.00 0.00 3.58
3186 4543 4.760715 GGAACCTTCTTCCCTTAACTTGAC 59.239 45.833 0.00 0.00 32.48 3.18
3187 4544 4.504340 CGGAACCTTCTTCCCTTAACTTGA 60.504 45.833 0.00 0.00 35.17 3.02
3188 4545 3.751698 CGGAACCTTCTTCCCTTAACTTG 59.248 47.826 0.00 0.00 35.17 3.16
3189 4546 3.393609 ACGGAACCTTCTTCCCTTAACTT 59.606 43.478 0.00 0.00 35.17 2.66
3190 4547 2.977580 ACGGAACCTTCTTCCCTTAACT 59.022 45.455 0.00 0.00 35.17 2.24
3191 4548 3.413846 ACGGAACCTTCTTCCCTTAAC 57.586 47.619 0.00 0.00 35.17 2.01
3192 4549 5.072193 AGTTAACGGAACCTTCTTCCCTTAA 59.928 40.000 0.00 0.00 39.02 1.85
3193 4550 4.594491 AGTTAACGGAACCTTCTTCCCTTA 59.406 41.667 0.00 0.00 39.02 2.69
3194 4551 3.393609 AGTTAACGGAACCTTCTTCCCTT 59.606 43.478 0.00 0.00 39.02 3.95
3195 4552 2.977580 AGTTAACGGAACCTTCTTCCCT 59.022 45.455 0.00 0.00 39.02 4.20
3196 4553 3.332919 GAGTTAACGGAACCTTCTTCCC 58.667 50.000 0.00 0.00 39.02 3.97
3197 4554 2.991866 CGAGTTAACGGAACCTTCTTCC 59.008 50.000 0.00 0.00 39.02 3.46
3198 4555 3.905784 TCGAGTTAACGGAACCTTCTTC 58.094 45.455 0.00 0.00 39.02 2.87
3199 4556 4.532314 ATCGAGTTAACGGAACCTTCTT 57.468 40.909 0.00 0.00 39.02 2.52
3200 4557 4.492611 GAATCGAGTTAACGGAACCTTCT 58.507 43.478 0.00 0.00 39.02 2.85
3201 4558 3.615937 GGAATCGAGTTAACGGAACCTTC 59.384 47.826 0.00 3.64 39.02 3.46
3202 4559 3.260128 AGGAATCGAGTTAACGGAACCTT 59.740 43.478 17.24 6.46 39.02 3.50
3203 4560 2.830321 AGGAATCGAGTTAACGGAACCT 59.170 45.455 17.24 17.24 39.02 3.50
3204 4561 3.242549 AGGAATCGAGTTAACGGAACC 57.757 47.619 0.00 9.64 39.02 3.62
3205 4562 5.178067 TCAAAAGGAATCGAGTTAACGGAAC 59.822 40.000 0.00 0.00 38.44 3.62
3206 4563 5.299148 TCAAAAGGAATCGAGTTAACGGAA 58.701 37.500 0.00 0.00 0.00 4.30
3207 4564 4.885413 TCAAAAGGAATCGAGTTAACGGA 58.115 39.130 0.00 2.42 0.00 4.69
3208 4565 5.350365 TGATCAAAAGGAATCGAGTTAACGG 59.650 40.000 0.00 0.00 0.00 4.44
3209 4566 6.403333 TGATCAAAAGGAATCGAGTTAACG 57.597 37.500 0.00 0.00 0.00 3.18
3210 4567 7.271438 GCTTTGATCAAAAGGAATCGAGTTAAC 59.729 37.037 20.82 0.00 44.73 2.01
3211 4568 7.174946 AGCTTTGATCAAAAGGAATCGAGTTAA 59.825 33.333 20.82 0.00 44.73 2.01
3212 4569 6.655003 AGCTTTGATCAAAAGGAATCGAGTTA 59.345 34.615 20.82 0.00 44.73 2.24
3213 4570 5.474876 AGCTTTGATCAAAAGGAATCGAGTT 59.525 36.000 20.82 2.33 44.73 3.01
3214 4571 5.006386 AGCTTTGATCAAAAGGAATCGAGT 58.994 37.500 20.82 0.00 44.73 4.18
3215 4572 5.557891 AGCTTTGATCAAAAGGAATCGAG 57.442 39.130 20.82 7.82 44.73 4.04
3216 4573 7.630242 ATTAGCTTTGATCAAAAGGAATCGA 57.370 32.000 20.82 0.00 44.73 3.59
3217 4574 8.693542 AAATTAGCTTTGATCAAAAGGAATCG 57.306 30.769 20.82 9.24 44.73 3.34
3219 4576 8.724229 GCAAAATTAGCTTTGATCAAAAGGAAT 58.276 29.630 20.82 15.76 44.73 3.01
3220 4577 7.714377 TGCAAAATTAGCTTTGATCAAAAGGAA 59.286 29.630 20.82 14.40 44.73 3.36
3221 4578 7.215789 TGCAAAATTAGCTTTGATCAAAAGGA 58.784 30.769 20.82 8.59 44.73 3.36
3222 4579 7.424227 TGCAAAATTAGCTTTGATCAAAAGG 57.576 32.000 20.82 11.91 44.73 3.11
3223 4580 9.325150 CATTGCAAAATTAGCTTTGATCAAAAG 57.675 29.630 20.82 15.34 46.90 2.27
3224 4581 8.838365 ACATTGCAAAATTAGCTTTGATCAAAA 58.162 25.926 20.82 7.48 38.35 2.44
3225 4582 8.380743 ACATTGCAAAATTAGCTTTGATCAAA 57.619 26.923 19.45 19.45 38.35 2.69
3226 4583 7.966246 ACATTGCAAAATTAGCTTTGATCAA 57.034 28.000 1.71 3.38 38.35 2.57
3227 4584 7.760794 CCTACATTGCAAAATTAGCTTTGATCA 59.239 33.333 1.71 0.00 38.35 2.92
3228 4585 7.254218 GCCTACATTGCAAAATTAGCTTTGATC 60.254 37.037 1.71 0.00 38.35 2.92
3229 4586 6.536224 GCCTACATTGCAAAATTAGCTTTGAT 59.464 34.615 1.71 0.00 38.35 2.57
3230 4587 5.868801 GCCTACATTGCAAAATTAGCTTTGA 59.131 36.000 1.71 0.00 38.35 2.69
3231 4588 5.638657 TGCCTACATTGCAAAATTAGCTTTG 59.361 36.000 1.71 0.00 38.97 2.77
3232 4589 5.792741 TGCCTACATTGCAAAATTAGCTTT 58.207 33.333 1.71 0.00 35.40 3.51
3233 4590 5.404466 TGCCTACATTGCAAAATTAGCTT 57.596 34.783 1.71 0.00 35.40 3.74
3234 4591 5.404466 TTGCCTACATTGCAAAATTAGCT 57.596 34.783 1.71 0.00 45.11 3.32
3242 4599 2.284754 TCCAGTTGCCTACATTGCAA 57.715 45.000 0.00 0.00 45.83 4.08
3243 4600 2.093890 CATCCAGTTGCCTACATTGCA 58.906 47.619 0.00 0.00 36.84 4.08
3244 4601 2.357009 CTCATCCAGTTGCCTACATTGC 59.643 50.000 0.00 0.00 0.00 3.56
3245 4602 2.947652 CCTCATCCAGTTGCCTACATTG 59.052 50.000 0.00 0.00 0.00 2.82
3246 4603 2.578021 ACCTCATCCAGTTGCCTACATT 59.422 45.455 0.00 0.00 0.00 2.71
3247 4604 2.200081 ACCTCATCCAGTTGCCTACAT 58.800 47.619 0.00 0.00 0.00 2.29
3248 4605 1.656587 ACCTCATCCAGTTGCCTACA 58.343 50.000 0.00 0.00 0.00 2.74
3249 4606 2.789409 AACCTCATCCAGTTGCCTAC 57.211 50.000 0.00 0.00 0.00 3.18
3250 4607 3.780294 ACATAACCTCATCCAGTTGCCTA 59.220 43.478 0.00 0.00 0.00 3.93
3251 4608 2.578021 ACATAACCTCATCCAGTTGCCT 59.422 45.455 0.00 0.00 0.00 4.75
3252 4609 3.004752 ACATAACCTCATCCAGTTGCC 57.995 47.619 0.00 0.00 0.00 4.52
3253 4610 4.513442 TGTACATAACCTCATCCAGTTGC 58.487 43.478 0.00 0.00 0.00 4.17
3254 4611 7.987458 ACTATTGTACATAACCTCATCCAGTTG 59.013 37.037 0.00 0.00 0.00 3.16
3255 4612 7.987458 CACTATTGTACATAACCTCATCCAGTT 59.013 37.037 0.00 0.00 0.00 3.16
3256 4613 7.125811 ACACTATTGTACATAACCTCATCCAGT 59.874 37.037 0.00 0.00 32.60 4.00
3257 4614 7.439356 CACACTATTGTACATAACCTCATCCAG 59.561 40.741 0.00 0.00 33.30 3.86
3258 4615 7.272244 CACACTATTGTACATAACCTCATCCA 58.728 38.462 0.00 0.00 33.30 3.41
3259 4616 6.706270 CCACACTATTGTACATAACCTCATCC 59.294 42.308 0.00 0.00 33.30 3.51
3260 4617 7.272978 ACCACACTATTGTACATAACCTCATC 58.727 38.462 0.00 0.00 33.30 2.92
3261 4618 7.125811 AGACCACACTATTGTACATAACCTCAT 59.874 37.037 0.00 0.00 33.30 2.90
3262 4619 6.439375 AGACCACACTATTGTACATAACCTCA 59.561 38.462 0.00 0.00 33.30 3.86
3263 4620 6.875076 AGACCACACTATTGTACATAACCTC 58.125 40.000 0.00 0.00 33.30 3.85
3264 4621 6.869206 AGACCACACTATTGTACATAACCT 57.131 37.500 0.00 0.00 33.30 3.50
3265 4622 9.609346 AAATAGACCACACTATTGTACATAACC 57.391 33.333 0.00 0.00 40.69 2.85
3269 4626 9.383519 CAGAAAATAGACCACACTATTGTACAT 57.616 33.333 0.00 0.00 40.69 2.29
3270 4627 8.372459 ACAGAAAATAGACCACACTATTGTACA 58.628 33.333 0.00 0.00 40.69 2.90
3271 4628 8.773404 ACAGAAAATAGACCACACTATTGTAC 57.227 34.615 0.00 0.00 40.69 2.90
3272 4629 9.787435 AAACAGAAAATAGACCACACTATTGTA 57.213 29.630 0.00 0.00 40.69 2.41
3273 4630 8.691661 AAACAGAAAATAGACCACACTATTGT 57.308 30.769 0.00 0.00 40.69 2.71
3274 4631 9.003658 AGAAACAGAAAATAGACCACACTATTG 57.996 33.333 0.00 0.00 40.69 1.90
3275 4632 9.003658 CAGAAACAGAAAATAGACCACACTATT 57.996 33.333 0.00 0.00 42.54 1.73
3276 4633 8.375506 TCAGAAACAGAAAATAGACCACACTAT 58.624 33.333 0.00 0.00 34.98 2.12
3277 4634 7.732025 TCAGAAACAGAAAATAGACCACACTA 58.268 34.615 0.00 0.00 0.00 2.74
3278 4635 6.591935 TCAGAAACAGAAAATAGACCACACT 58.408 36.000 0.00 0.00 0.00 3.55
3279 4636 6.861065 TCAGAAACAGAAAATAGACCACAC 57.139 37.500 0.00 0.00 0.00 3.82
3280 4637 7.054124 AGTTCAGAAACAGAAAATAGACCACA 58.946 34.615 0.00 0.00 37.88 4.17
3281 4638 7.442666 AGAGTTCAGAAACAGAAAATAGACCAC 59.557 37.037 0.00 0.00 37.88 4.16
3282 4639 7.509546 AGAGTTCAGAAACAGAAAATAGACCA 58.490 34.615 0.00 0.00 37.88 4.02
3283 4640 7.971183 AGAGTTCAGAAACAGAAAATAGACC 57.029 36.000 0.00 0.00 37.88 3.85
3287 4644 9.923143 TCGAATAGAGTTCAGAAACAGAAAATA 57.077 29.630 0.00 0.00 37.88 1.40
3288 4645 8.833231 TCGAATAGAGTTCAGAAACAGAAAAT 57.167 30.769 0.00 0.00 37.88 1.82
3289 4646 8.548721 GTTCGAATAGAGTTCAGAAACAGAAAA 58.451 33.333 0.00 0.00 37.88 2.29
3290 4647 7.709182 TGTTCGAATAGAGTTCAGAAACAGAAA 59.291 33.333 0.00 0.00 37.88 2.52
3291 4648 7.207383 TGTTCGAATAGAGTTCAGAAACAGAA 58.793 34.615 0.00 0.00 37.88 3.02
3292 4649 6.745116 TGTTCGAATAGAGTTCAGAAACAGA 58.255 36.000 0.00 0.00 37.88 3.41
3293 4650 7.284351 GTTGTTCGAATAGAGTTCAGAAACAG 58.716 38.462 0.00 0.00 37.88 3.16
3294 4651 6.074516 CGTTGTTCGAATAGAGTTCAGAAACA 60.075 38.462 0.00 0.00 42.86 2.83
3295 4652 6.074463 ACGTTGTTCGAATAGAGTTCAGAAAC 60.074 38.462 0.00 0.00 42.86 2.78
3296 4653 5.981315 ACGTTGTTCGAATAGAGTTCAGAAA 59.019 36.000 0.00 0.00 42.86 2.52
3297 4654 5.526115 ACGTTGTTCGAATAGAGTTCAGAA 58.474 37.500 0.00 0.00 42.86 3.02
3298 4655 5.117355 ACGTTGTTCGAATAGAGTTCAGA 57.883 39.130 0.00 0.00 42.86 3.27
3299 4656 5.401376 TGAACGTTGTTCGAATAGAGTTCAG 59.599 40.000 26.87 8.79 40.84 3.02
3300 4657 5.283294 TGAACGTTGTTCGAATAGAGTTCA 58.717 37.500 26.87 26.87 42.63 3.18
3301 4658 5.401674 ACTGAACGTTGTTCGAATAGAGTTC 59.598 40.000 24.01 24.01 42.86 3.01
3302 4659 5.287226 ACTGAACGTTGTTCGAATAGAGTT 58.713 37.500 5.00 13.74 42.86 3.01
3303 4660 4.868067 ACTGAACGTTGTTCGAATAGAGT 58.132 39.130 5.00 0.00 42.86 3.24
3304 4661 4.029198 CGACTGAACGTTGTTCGAATAGAG 59.971 45.833 5.00 0.00 42.86 2.43
3305 4662 3.910170 CGACTGAACGTTGTTCGAATAGA 59.090 43.478 5.00 0.00 42.86 1.98
3306 4663 3.910170 TCGACTGAACGTTGTTCGAATAG 59.090 43.478 18.17 0.00 42.86 1.73
3307 4664 3.887741 TCGACTGAACGTTGTTCGAATA 58.112 40.909 18.17 0.00 42.86 1.75
3308 4665 2.734670 TCGACTGAACGTTGTTCGAAT 58.265 42.857 18.17 0.00 42.86 3.34
3309 4666 2.191815 TCGACTGAACGTTGTTCGAA 57.808 45.000 18.17 0.00 42.86 3.71
3310 4667 2.410785 ATCGACTGAACGTTGTTCGA 57.589 45.000 21.08 21.08 42.86 3.71
3311 4668 3.499072 AAATCGACTGAACGTTGTTCG 57.501 42.857 5.00 10.91 46.00 3.95
3312 4669 4.584394 ACAAAATCGACTGAACGTTGTTC 58.416 39.130 5.00 2.80 30.19 3.18
3313 4670 4.609691 ACAAAATCGACTGAACGTTGTT 57.390 36.364 5.00 0.00 30.19 2.83
3314 4671 4.142773 ACAACAAAATCGACTGAACGTTGT 60.143 37.500 5.00 11.76 40.47 3.32
3315 4672 4.339429 ACAACAAAATCGACTGAACGTTG 58.661 39.130 5.00 10.79 38.68 4.10
3316 4673 4.609691 ACAACAAAATCGACTGAACGTT 57.390 36.364 0.00 0.00 34.70 3.99
3317 4674 4.339429 CAACAACAAAATCGACTGAACGT 58.661 39.130 0.00 0.00 34.70 3.99
3318 4675 3.177643 GCAACAACAAAATCGACTGAACG 59.822 43.478 0.00 0.00 0.00 3.95
3319 4676 3.177643 CGCAACAACAAAATCGACTGAAC 59.822 43.478 0.00 0.00 0.00 3.18
3320 4677 3.358775 CGCAACAACAAAATCGACTGAA 58.641 40.909 0.00 0.00 0.00 3.02
3321 4678 2.852901 GCGCAACAACAAAATCGACTGA 60.853 45.455 0.30 0.00 0.00 3.41
3322 4679 1.447938 GCGCAACAACAAAATCGACTG 59.552 47.619 0.30 0.00 0.00 3.51
3323 4680 1.333619 AGCGCAACAACAAAATCGACT 59.666 42.857 11.47 0.00 0.00 4.18
3324 4681 1.753956 AGCGCAACAACAAAATCGAC 58.246 45.000 11.47 0.00 0.00 4.20
3325 4682 2.483583 AAGCGCAACAACAAAATCGA 57.516 40.000 11.47 0.00 0.00 3.59
3326 4683 2.788786 AGAAAGCGCAACAACAAAATCG 59.211 40.909 11.47 0.00 0.00 3.34
3327 4684 6.452244 AATAGAAAGCGCAACAACAAAATC 57.548 33.333 11.47 0.00 0.00 2.17
3328 4685 6.648502 CAAATAGAAAGCGCAACAACAAAAT 58.351 32.000 11.47 0.00 0.00 1.82
3329 4686 5.501574 GCAAATAGAAAGCGCAACAACAAAA 60.502 36.000 11.47 0.00 0.00 2.44
3330 4687 4.026145 GCAAATAGAAAGCGCAACAACAAA 60.026 37.500 11.47 0.00 0.00 2.83
3331 4688 3.489047 GCAAATAGAAAGCGCAACAACAA 59.511 39.130 11.47 0.00 0.00 2.83
3332 4689 3.049206 GCAAATAGAAAGCGCAACAACA 58.951 40.909 11.47 0.00 0.00 3.33
3333 4690 3.120121 CAGCAAATAGAAAGCGCAACAAC 59.880 43.478 11.47 0.00 0.00 3.32
3334 4691 3.307674 CAGCAAATAGAAAGCGCAACAA 58.692 40.909 11.47 0.00 0.00 2.83
3335 4692 2.921912 GCAGCAAATAGAAAGCGCAACA 60.922 45.455 11.47 0.00 0.00 3.33
3336 4693 1.650645 GCAGCAAATAGAAAGCGCAAC 59.349 47.619 11.47 0.00 0.00 4.17
3340 4697 1.542544 GCAGCAGCAAATAGAAAGCG 58.457 50.000 0.00 0.00 41.58 4.68
3505 4862 0.612174 TCTCCTTCTCCAGGGTCACG 60.612 60.000 0.00 0.00 44.12 4.35
3574 4931 0.764369 AGACCAGCAGGAGGTTGTCA 60.764 55.000 0.35 0.00 39.57 3.58
3639 4996 1.730902 CATCGCTATCTCCACGCCG 60.731 63.158 0.00 0.00 0.00 6.46
3910 5279 4.532126 ACACAGATTGACTCATTACCCAGA 59.468 41.667 0.00 0.00 0.00 3.86
3963 5332 1.133853 AGCAGAATCATGAAGGGCTCC 60.134 52.381 0.00 0.00 0.00 4.70
3968 5337 3.806380 AGCAGTAGCAGAATCATGAAGG 58.194 45.455 0.00 0.00 45.49 3.46
4005 5381 2.019984 TGTGCTGCACAACATAACACA 58.980 42.857 31.31 5.58 41.69 3.72
4006 5382 2.033299 ACTGTGCTGCACAACATAACAC 59.967 45.455 32.33 4.85 44.08 3.32
4007 5383 2.296792 ACTGTGCTGCACAACATAACA 58.703 42.857 32.33 10.62 44.08 2.41
4073 5449 7.050377 CCTATTATGAACTTGTGATGTGGTCT 58.950 38.462 0.00 0.00 0.00 3.85
4074 5450 6.823689 ACCTATTATGAACTTGTGATGTGGTC 59.176 38.462 0.00 0.00 0.00 4.02
4107 5483 5.348724 CACTTATTATTGTGGATCGGATCGG 59.651 44.000 11.62 0.00 0.00 4.18
4108 5484 5.926542 ACACTTATTATTGTGGATCGGATCG 59.073 40.000 11.62 0.00 38.39 3.69
4109 5485 6.089551 CGACACTTATTATTGTGGATCGGATC 59.910 42.308 9.54 9.54 38.39 3.36
4110 5486 5.926542 CGACACTTATTATTGTGGATCGGAT 59.073 40.000 0.00 0.00 38.39 4.18
4154 5530 9.669887 TGGTTTTAGTTCAAACTACAAACTCTA 57.330 29.630 22.43 14.85 38.84 2.43
4156 5532 7.427318 CGTGGTTTTAGTTCAAACTACAAACTC 59.573 37.037 22.43 16.41 44.31 3.01
4157 5533 7.245604 CGTGGTTTTAGTTCAAACTACAAACT 58.754 34.615 22.43 0.00 44.31 2.66
4158 5534 6.469915 CCGTGGTTTTAGTTCAAACTACAAAC 59.530 38.462 19.22 19.22 44.31 2.93
4159 5535 6.553524 CCGTGGTTTTAGTTCAAACTACAAA 58.446 36.000 11.73 4.77 44.31 2.83
4160 5536 5.448904 GCCGTGGTTTTAGTTCAAACTACAA 60.449 40.000 11.73 0.33 44.31 2.41
4161 5537 4.035441 GCCGTGGTTTTAGTTCAAACTACA 59.965 41.667 11.73 0.00 44.31 2.74
4162 5538 4.035441 TGCCGTGGTTTTAGTTCAAACTAC 59.965 41.667 2.13 3.45 42.01 2.73
4164 5540 3.018149 TGCCGTGGTTTTAGTTCAAACT 58.982 40.909 0.46 0.46 42.91 2.66
4166 5542 3.018149 AGTGCCGTGGTTTTAGTTCAAA 58.982 40.909 0.00 0.00 0.00 2.69
4167 5543 2.645802 AGTGCCGTGGTTTTAGTTCAA 58.354 42.857 0.00 0.00 0.00 2.69
4168 5544 2.335316 AGTGCCGTGGTTTTAGTTCA 57.665 45.000 0.00 0.00 0.00 3.18
4170 5546 2.371306 ACAAGTGCCGTGGTTTTAGTT 58.629 42.857 0.00 0.00 0.00 2.24
4171 5547 2.047002 ACAAGTGCCGTGGTTTTAGT 57.953 45.000 0.00 0.00 0.00 2.24
4172 5548 4.472286 CATAACAAGTGCCGTGGTTTTAG 58.528 43.478 0.00 0.00 0.00 1.85
4173 5549 3.253677 CCATAACAAGTGCCGTGGTTTTA 59.746 43.478 0.00 0.00 0.00 1.52
4316 6297 4.502645 GCGTACTTTCACAATTTGCAAGTT 59.497 37.500 0.65 0.65 38.39 2.66
4331 6312 1.339727 GGAACTGATGGGGCGTACTTT 60.340 52.381 0.00 0.00 0.00 2.66
4352 6333 2.096268 GCCGTAAAAAGTTGACCGGTAC 60.096 50.000 7.34 2.29 37.76 3.34
4356 6337 0.945813 TGGCCGTAAAAAGTTGACCG 59.054 50.000 0.00 0.00 0.00 4.79
4357 6338 3.004944 TCAATGGCCGTAAAAAGTTGACC 59.995 43.478 0.00 0.00 0.00 4.02
4386 6370 5.673337 TTCACAACAATCTGCACTTAGTC 57.327 39.130 0.00 0.00 0.00 2.59
4487 6480 4.019501 AGACTTGACTGCCTTCTGATTGAT 60.020 41.667 0.00 0.00 0.00 2.57
4513 6506 6.916387 TGAACGACTGAGTAGTTTCTTACTTG 59.084 38.462 12.24 0.00 37.25 3.16
4520 6513 6.150318 TCTGATTGAACGACTGAGTAGTTTC 58.850 40.000 12.24 7.09 37.25 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.