Multiple sequence alignment - TraesCS3A01G390900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G390900 chr3A 100.000 9973 0 0 1 9973 638984439 638994411 0.000000e+00 18417.0
1 TraesCS3A01G390900 chr3A 83.333 108 15 3 2830 2935 536902533 536902427 8.250000e-16 97.1
2 TraesCS3A01G390900 chr3B 95.725 7696 246 38 548 8177 659585738 659593416 0.000000e+00 12312.0
3 TraesCS3A01G390900 chr3B 94.862 1090 42 10 8174 9257 659594253 659595334 0.000000e+00 1690.0
4 TraesCS3A01G390900 chr3B 89.696 427 39 5 2 424 659585314 659585739 3.170000e-149 540.0
5 TraesCS3A01G390900 chr3B 93.333 150 6 4 416 565 741865983 741865838 1.690000e-52 219.0
6 TraesCS3A01G390900 chr3B 96.212 132 5 0 420 551 723626478 723626609 6.070000e-52 217.0
7 TraesCS3A01G390900 chr3B 87.850 107 7 5 9293 9393 659595545 659595651 4.890000e-23 121.0
8 TraesCS3A01G390900 chr3B 98.333 60 1 0 9914 9973 651887407 651887466 1.370000e-18 106.0
9 TraesCS3A01G390900 chr3B 92.857 70 3 2 9905 9973 818353749 818353817 6.370000e-17 100.0
10 TraesCS3A01G390900 chr3B 96.000 50 2 0 9711 9760 659597541 659597590 2.310000e-11 82.4
11 TraesCS3A01G390900 chr3D 95.310 6930 218 37 548 7416 498874657 498881540 0.000000e+00 10898.0
12 TraesCS3A01G390900 chr3D 93.120 2442 83 41 7415 9825 498881644 498884031 0.000000e+00 3500.0
13 TraesCS3A01G390900 chr3D 91.784 426 33 2 2 425 498874234 498874659 8.630000e-165 592.0
14 TraesCS3A01G390900 chr3D 94.928 138 6 1 418 555 496172751 496172887 2.180000e-51 215.0
15 TraesCS3A01G390900 chr3D 92.517 147 9 2 407 553 443434380 443434236 1.020000e-49 209.0
16 TraesCS3A01G390900 chr3D 96.825 63 1 1 9911 9973 81200916 81200977 4.930000e-18 104.0
17 TraesCS3A01G390900 chr3D 93.182 44 3 0 9414 9457 500043908 500043951 2.330000e-06 65.8
18 TraesCS3A01G390900 chr7A 85.751 386 43 8 5273 5654 594576532 594576909 2.020000e-106 398.0
19 TraesCS3A01G390900 chr7A 84.456 386 46 9 5273 5654 110068754 110069129 1.580000e-97 368.0
20 TraesCS3A01G390900 chr7A 94.928 138 6 1 416 553 15084527 15084391 2.180000e-51 215.0
21 TraesCS3A01G390900 chr7A 92.683 41 3 0 9417 9457 481579900 481579940 1.080000e-04 60.2
22 TraesCS3A01G390900 chr2D 85.233 386 41 9 5273 5654 89205071 89204698 5.650000e-102 383.0
23 TraesCS3A01G390900 chr2D 84.974 386 42 10 5273 5654 104911795 104912168 2.630000e-100 377.0
24 TraesCS3A01G390900 chr2D 94.872 39 2 0 9417 9455 537789582 537789620 3.010000e-05 62.1
25 TraesCS3A01G390900 chr1D 96.241 133 5 0 421 553 406733789 406733921 1.690000e-52 219.0
26 TraesCS3A01G390900 chr1D 95.122 41 2 0 9417 9457 472748767 472748727 2.330000e-06 65.8
27 TraesCS3A01G390900 chr2A 95.556 135 6 0 420 554 40541994 40542128 6.070000e-52 217.0
28 TraesCS3A01G390900 chr2A 96.825 63 2 0 9911 9973 729131763 729131701 1.370000e-18 106.0
29 TraesCS3A01G390900 chr2A 95.000 40 2 0 9417 9456 550864918 550864957 8.360000e-06 63.9
30 TraesCS3A01G390900 chr7D 96.212 132 4 1 424 554 6484596 6484465 2.180000e-51 215.0
31 TraesCS3A01G390900 chr7D 96.774 62 2 0 9912 9973 405908545 405908606 4.930000e-18 104.0
32 TraesCS3A01G390900 chr5B 92.105 152 9 3 418 566 406873495 406873344 2.820000e-50 211.0
33 TraesCS3A01G390900 chr5B 90.000 100 9 1 2828 2927 680856571 680856473 2.920000e-25 128.0
34 TraesCS3A01G390900 chr4B 87.879 99 10 2 2830 2927 158268741 158268838 2.280000e-21 115.0
35 TraesCS3A01G390900 chr4B 94.030 67 2 2 9907 9973 67290479 67290415 6.370000e-17 100.0
36 TraesCS3A01G390900 chr1A 98.413 63 1 0 9911 9973 548742998 548743060 2.940000e-20 111.0
37 TraesCS3A01G390900 chr1A 84.259 108 10 7 2830 2934 451364265 451364368 2.290000e-16 99.0
38 TraesCS3A01G390900 chr1A 89.130 46 2 3 9484 9529 62454165 62454207 5.000000e-03 54.7
39 TraesCS3A01G390900 chr2B 86.869 99 9 4 2830 2926 402257305 402257209 3.810000e-19 108.0
40 TraesCS3A01G390900 chr2B 94.030 67 4 0 9907 9973 738486756 738486690 1.770000e-17 102.0
41 TraesCS3A01G390900 chr2B 85.000 100 13 2 2829 2927 726436212 726436310 6.370000e-17 100.0
42 TraesCS3A01G390900 chr5A 92.537 67 5 0 9907 9973 475529041 475528975 8.250000e-16 97.1
43 TraesCS3A01G390900 chr5A 82.407 108 12 7 2822 2926 569297667 569297564 4.960000e-13 87.9
44 TraesCS3A01G390900 chr6A 93.333 45 2 1 9417 9461 8000384 8000341 2.330000e-06 65.8
45 TraesCS3A01G390900 chr5D 92.683 41 3 0 9417 9457 40302748 40302788 1.080000e-04 60.2
46 TraesCS3A01G390900 chr5D 92.683 41 3 0 9417 9457 123089668 123089628 1.080000e-04 60.2
47 TraesCS3A01G390900 chr6D 100.000 30 0 0 9495 9524 10063977 10063948 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G390900 chr3A 638984439 638994411 9972 False 18417.000000 18417 100.000000 1 9973 1 chr3A.!!$F1 9972
1 TraesCS3A01G390900 chr3B 659585314 659597590 12276 False 2949.080000 12312 92.826600 2 9760 5 chr3B.!!$F4 9758
2 TraesCS3A01G390900 chr3D 498874234 498884031 9797 False 4996.666667 10898 93.404667 2 9825 3 chr3D.!!$F4 9823

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
439 443 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12 F
440 444 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28 F
1337 1354 0.460311 CAGGTTCGGGCTCGTTATCT 59.540 55.000 5.57 0.00 37.69 1.98 F
1342 1359 0.745486 TCGGGCTCGTTATCTCGTGA 60.745 55.000 5.57 0.00 37.69 4.35 F
1616 1677 1.069049 GCCACAAATGCTGTTCAGGTT 59.931 47.619 1.97 0.00 35.47 3.50 F
2336 2400 1.239968 CCTTCAGGCAGTGAACCAGC 61.240 60.000 0.00 0.00 40.45 4.85 F
3636 3701 1.216678 TGCTTCTTTTCCAGGACCCAA 59.783 47.619 0.00 0.00 0.00 4.12 F
4050 4116 0.179215 GCCAAACACTCTGCGATTCG 60.179 55.000 0.62 0.62 0.00 3.34 F
4137 4203 0.456221 ACCACGACTGCTCGGAATAG 59.544 55.000 0.18 0.00 44.80 1.73 F
4845 4911 0.457851 TGGTCAAAACTTTGCCGGTG 59.542 50.000 1.90 0.00 37.25 4.94 F
5251 5318 0.983467 TGCTTGATCCAGGTGTGCTA 59.017 50.000 0.00 0.00 0.00 3.49 F
6492 6565 1.021968 GTCTCGGTGCAAAGTTGGTT 58.978 50.000 0.00 0.00 0.00 3.67 F
7267 7345 0.031585 CGAAGTTATCGCCCCATCGA 59.968 55.000 0.00 0.00 45.89 3.59 F
8128 8322 0.459585 GGCAGCCAATGAGTGCAATG 60.460 55.000 6.55 0.00 39.05 2.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1351 1368 0.179070 TGCGAACCACAACACTGCTA 60.179 50.000 0.00 0.00 0.00 3.49 R
2316 2380 0.607489 CTGGTTCACTGCCTGAAGGG 60.607 60.000 0.00 0.00 39.69 3.95 R
2637 2701 1.666189 GCCGCTGATAAAACCTCACTC 59.334 52.381 0.00 0.00 0.00 3.51 R
2762 2826 2.206576 AGTCAGGATTCCCAAACTGC 57.793 50.000 0.00 0.00 31.01 4.40 R
2820 2884 5.422331 TGAGATAGAGGGAGTACAACTTTGG 59.578 44.000 0.00 0.00 0.00 3.28 R
4044 4110 1.584483 GCCTGCATTGCACGAATCG 60.584 57.895 7.38 0.00 33.79 3.34 R
4863 4929 0.179040 ACGGACGGCTTCAGGAAAAA 60.179 50.000 0.00 0.00 0.00 1.94 R
6015 6087 2.088423 ACGTTTTGGTGAACAGCAGAA 58.912 42.857 6.78 6.37 40.18 3.02 R
6101 6174 0.817013 ACACACTTGTTTGCAGTGGG 59.183 50.000 3.89 3.89 42.19 4.61 R
6492 6565 1.362932 ACTAAGCTTCCCTCTCCTCCA 59.637 52.381 0.00 0.00 0.00 3.86 R
6508 6581 2.100252 GGTACATGCTGCTCCGTACTAA 59.900 50.000 18.92 0.00 35.61 2.24 R
8456 9492 0.739561 GGAGAGCACGGTAGGTACTG 59.260 60.000 0.00 0.00 41.52 2.74 R
8684 9723 0.913934 TAGGGTGCTTGATGCTGGGA 60.914 55.000 0.00 0.00 43.37 4.37 R
9707 10955 0.036388 TCAAGCATGGAAGGTCGTCC 60.036 55.000 0.00 0.00 38.27 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 6.147164 ACAGTACCAAATGAACTACACAATCG 59.853 38.462 0.00 0.00 0.00 3.34
35 37 3.487942 TGAACTACACAATCGACACAACG 59.512 43.478 0.00 0.00 0.00 4.10
54 56 6.948228 CACAACGAAAACTTGTATCGACTATG 59.052 38.462 13.25 9.55 39.73 2.23
58 60 5.500290 CGAAAACTTGTATCGACTATGCCAC 60.500 44.000 0.00 0.00 38.82 5.01
60 62 2.764010 ACTTGTATCGACTATGCCACCA 59.236 45.455 0.00 0.00 0.00 4.17
109 111 1.527433 GAGCAAAGCCAAGTCCACCC 61.527 60.000 0.00 0.00 0.00 4.61
127 129 0.451783 CCAATACCCGCTTTGCAGTC 59.548 55.000 0.00 0.00 0.00 3.51
130 132 0.676782 ATACCCGCTTTGCAGTCCAC 60.677 55.000 0.00 0.00 0.00 4.02
132 134 2.972505 CCGCTTTGCAGTCCACGT 60.973 61.111 0.00 0.00 0.00 4.49
186 190 2.116238 GGCCTAGTCACTATTGTGGGA 58.884 52.381 7.45 0.00 43.94 4.37
231 235 7.766278 GCGGATTTGTTACCATCTATATGATCT 59.234 37.037 0.00 0.00 34.84 2.75
263 267 3.628053 GCATTGATCAACAACGCATTG 57.372 42.857 11.07 3.65 45.33 2.82
313 317 1.546998 CGGCTTTCCCCCTTACTTTGT 60.547 52.381 0.00 0.00 0.00 2.83
314 318 1.893137 GGCTTTCCCCCTTACTTTGTG 59.107 52.381 0.00 0.00 0.00 3.33
316 320 3.227614 GCTTTCCCCCTTACTTTGTGAA 58.772 45.455 0.00 0.00 0.00 3.18
322 326 2.556622 CCCCTTACTTTGTGAATGCGTT 59.443 45.455 0.00 0.00 0.00 4.84
323 327 3.754323 CCCCTTACTTTGTGAATGCGTTA 59.246 43.478 0.00 0.00 0.00 3.18
335 339 1.278238 ATGCGTTAGAAGCTACGTGC 58.722 50.000 8.43 0.00 39.80 5.34
366 370 1.702957 CTCCACCAAACCCTAACCTCA 59.297 52.381 0.00 0.00 0.00 3.86
402 406 7.279981 GCCAACCTTGAAATTTGAACTTTAAGT 59.720 33.333 0.00 0.00 0.00 2.24
425 429 8.999220 AGTGTAGGTTTTAGAAGCTTATGTAC 57.001 34.615 3.25 0.00 43.06 2.90
426 430 8.813951 AGTGTAGGTTTTAGAAGCTTATGTACT 58.186 33.333 3.25 0.00 43.06 2.73
427 431 9.085250 GTGTAGGTTTTAGAAGCTTATGTACTC 57.915 37.037 3.25 0.00 43.06 2.59
428 432 8.255905 TGTAGGTTTTAGAAGCTTATGTACTCC 58.744 37.037 3.25 0.49 43.06 3.85
429 433 6.651086 AGGTTTTAGAAGCTTATGTACTCCC 58.349 40.000 3.25 0.00 40.54 4.30
430 434 6.444171 AGGTTTTAGAAGCTTATGTACTCCCT 59.556 38.462 3.25 0.00 40.54 4.20
431 435 6.762187 GGTTTTAGAAGCTTATGTACTCCCTC 59.238 42.308 3.25 0.00 0.00 4.30
432 436 6.481434 TTTAGAAGCTTATGTACTCCCTCC 57.519 41.667 3.25 0.00 0.00 4.30
433 437 2.959707 AGAAGCTTATGTACTCCCTCCG 59.040 50.000 0.00 0.00 0.00 4.63
434 438 2.456073 AGCTTATGTACTCCCTCCGT 57.544 50.000 0.00 0.00 0.00 4.69
435 439 2.308690 AGCTTATGTACTCCCTCCGTC 58.691 52.381 0.00 0.00 0.00 4.79
436 440 1.340568 GCTTATGTACTCCCTCCGTCC 59.659 57.143 0.00 0.00 0.00 4.79
437 441 1.962100 CTTATGTACTCCCTCCGTCCC 59.038 57.143 0.00 0.00 0.00 4.46
438 442 0.928505 TATGTACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
439 443 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
440 444 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
441 445 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
442 446 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
443 447 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
444 448 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
445 449 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
446 450 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
447 451 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
448 452 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
449 453 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
450 454 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
451 455 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
452 456 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
453 457 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
454 458 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
455 459 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
456 460 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
457 461 7.244192 CGTCCCAAAATTCTTGTCTTAGATTC 58.756 38.462 0.00 0.00 0.00 2.52
458 462 7.244192 GTCCCAAAATTCTTGTCTTAGATTCG 58.756 38.462 0.00 0.00 0.00 3.34
459 463 6.940298 TCCCAAAATTCTTGTCTTAGATTCGT 59.060 34.615 0.00 0.00 0.00 3.85
460 464 7.119262 TCCCAAAATTCTTGTCTTAGATTCGTC 59.881 37.037 0.00 0.00 0.00 4.20
461 465 7.119846 CCCAAAATTCTTGTCTTAGATTCGTCT 59.880 37.037 0.00 0.00 0.00 4.18
462 466 9.151471 CCAAAATTCTTGTCTTAGATTCGTCTA 57.849 33.333 0.00 0.00 0.00 2.59
468 472 8.074474 TCTTGTCTTAGATTCGTCTAGATACG 57.926 38.462 0.00 0.00 44.19 3.06
469 473 6.782298 TGTCTTAGATTCGTCTAGATACGG 57.218 41.667 0.00 0.00 43.05 4.02
470 474 6.519382 TGTCTTAGATTCGTCTAGATACGGA 58.481 40.000 0.00 0.00 43.05 4.69
471 475 7.160049 TGTCTTAGATTCGTCTAGATACGGAT 58.840 38.462 0.00 0.00 43.73 4.18
472 476 7.117956 TGTCTTAGATTCGTCTAGATACGGATG 59.882 40.741 2.64 0.00 41.14 3.51
473 477 7.118101 GTCTTAGATTCGTCTAGATACGGATGT 59.882 40.741 2.64 1.92 41.14 3.06
474 478 8.309656 TCTTAGATTCGTCTAGATACGGATGTA 58.690 37.037 2.64 1.02 41.14 2.29
475 479 9.100554 CTTAGATTCGTCTAGATACGGATGTAT 57.899 37.037 2.64 0.00 41.14 2.29
491 495 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
492 496 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
493 497 9.622004 CGGATGTATCTAATACTAAAACGTGAT 57.378 33.333 0.00 0.00 36.70 3.06
537 541 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
538 542 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
539 543 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
540 544 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
541 545 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
542 546 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
543 547 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
544 548 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
545 549 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
546 550 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
547 551 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
548 552 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
567 571 9.583765 GAGGGAGTATATTTGAATATTCGTACC 57.416 37.037 10.80 4.29 33.78 3.34
620 625 5.164954 CCTCACTAGCAAGAAAGTCACTAC 58.835 45.833 0.00 0.00 0.00 2.73
651 656 7.789273 TTCATTTTACTCGACCAACAAGTTA 57.211 32.000 0.00 0.00 0.00 2.24
652 657 7.789273 TCATTTTACTCGACCAACAAGTTAA 57.211 32.000 0.00 0.00 0.00 2.01
653 658 8.211116 TCATTTTACTCGACCAACAAGTTAAA 57.789 30.769 0.00 0.00 0.00 1.52
654 659 8.675504 TCATTTTACTCGACCAACAAGTTAAAA 58.324 29.630 0.00 0.00 28.92 1.52
678 686 5.499004 AAAAATAGCCTGACTACCAGTGA 57.501 39.130 0.00 0.00 41.33 3.41
1157 1174 4.116328 CGAGCTTCGCTGTCCCGA 62.116 66.667 0.00 0.00 39.88 5.14
1171 1188 1.604278 GTCCCGAGATTTAGCATTGGC 59.396 52.381 0.00 0.00 41.61 4.52
1209 1226 2.787129 GGTTTACAGCTTGCGTTTGTTC 59.213 45.455 0.00 0.00 0.00 3.18
1327 1344 3.691342 TCCGACAGCAGGTTCGGG 61.691 66.667 17.58 2.85 44.92 5.14
1333 1350 3.626924 AGCAGGTTCGGGCTCGTT 61.627 61.111 5.57 0.00 34.76 3.85
1337 1354 0.460311 CAGGTTCGGGCTCGTTATCT 59.540 55.000 5.57 0.00 37.69 1.98
1342 1359 0.745486 TCGGGCTCGTTATCTCGTGA 60.745 55.000 5.57 0.00 37.69 4.35
1351 1368 5.006153 TCGTTATCTCGTGATCCATTTGT 57.994 39.130 2.72 0.00 34.32 2.83
1352 1369 6.139048 TCGTTATCTCGTGATCCATTTGTA 57.861 37.500 2.72 0.00 34.32 2.41
1359 1376 3.002791 CGTGATCCATTTGTAGCAGTGT 58.997 45.455 0.00 0.00 0.00 3.55
1364 1381 2.884012 TCCATTTGTAGCAGTGTTGTGG 59.116 45.455 0.00 0.00 0.00 4.17
1367 1384 4.290155 CATTTGTAGCAGTGTTGTGGTTC 58.710 43.478 0.00 0.00 0.00 3.62
1374 1391 2.095263 GCAGTGTTGTGGTTCGCAATAT 60.095 45.455 0.00 0.00 36.26 1.28
1376 1393 2.747446 AGTGTTGTGGTTCGCAATATCC 59.253 45.455 0.00 0.00 36.26 2.59
1377 1394 2.486203 GTGTTGTGGTTCGCAATATCCA 59.514 45.455 0.00 0.00 36.26 3.41
1390 1407 3.489738 GCAATATCCACGCTCTTTGCATT 60.490 43.478 0.00 0.00 43.06 3.56
1391 1408 4.675510 CAATATCCACGCTCTTTGCATTT 58.324 39.130 0.00 0.00 43.06 2.32
1392 1409 5.733091 GCAATATCCACGCTCTTTGCATTTA 60.733 40.000 0.00 0.00 43.06 1.40
1393 1410 5.679734 ATATCCACGCTCTTTGCATTTAG 57.320 39.130 0.00 0.00 43.06 1.85
1402 1436 5.391310 CGCTCTTTGCATTTAGAACTGATGT 60.391 40.000 0.00 0.00 43.06 3.06
1409 1443 7.686438 TGCATTTAGAACTGATGTGTTATGT 57.314 32.000 0.00 0.00 0.00 2.29
1418 1452 8.372459 AGAACTGATGTGTTATGTACTTTGGTA 58.628 33.333 0.00 0.00 0.00 3.25
1439 1473 5.590259 GGTACGAGGAAGTAGTGTGGTATTA 59.410 44.000 0.00 0.00 0.00 0.98
1440 1474 6.264067 GGTACGAGGAAGTAGTGTGGTATTAT 59.736 42.308 0.00 0.00 0.00 1.28
1477 1511 7.829725 TGCAGTGAATTTACTTTGAATATGCT 58.170 30.769 0.00 0.00 0.00 3.79
1487 1548 8.579850 TTACTTTGAATATGCTCCAGAATTGT 57.420 30.769 0.00 0.00 0.00 2.71
1495 1556 7.902920 ATATGCTCCAGAATTGTTTGGTATT 57.097 32.000 0.00 0.00 35.89 1.89
1504 1565 8.658609 CCAGAATTGTTTGGTATTTGCTTATTG 58.341 33.333 0.00 0.00 0.00 1.90
1513 1574 8.700722 TTGGTATTTGCTTATTGTTGCTTATG 57.299 30.769 0.00 0.00 0.00 1.90
1515 1576 7.093552 TGGTATTTGCTTATTGTTGCTTATGGT 60.094 33.333 0.00 0.00 0.00 3.55
1553 1614 3.305720 ACGGGAAGATATTGCTACTCCA 58.694 45.455 0.00 0.00 0.00 3.86
1595 1656 1.321474 CCAAGGAAGAACTTGCTGCA 58.679 50.000 9.14 0.00 44.98 4.41
1616 1677 1.069049 GCCACAAATGCTGTTCAGGTT 59.931 47.619 1.97 0.00 35.47 3.50
1620 1681 5.640732 CCACAAATGCTGTTCAGGTTATAC 58.359 41.667 1.97 0.00 35.47 1.47
1623 1684 7.023575 CACAAATGCTGTTCAGGTTATACTTC 58.976 38.462 1.97 0.00 35.47 3.01
1627 1688 3.684697 GCTGTTCAGGTTATACTTCCCCC 60.685 52.174 1.97 0.00 0.00 5.40
1632 1693 4.706616 TCAGGTTATACTTCCCCCTTTCT 58.293 43.478 0.00 0.00 0.00 2.52
1633 1694 4.473559 TCAGGTTATACTTCCCCCTTTCTG 59.526 45.833 0.00 0.00 0.00 3.02
1635 1696 5.427481 CAGGTTATACTTCCCCCTTTCTGTA 59.573 44.000 0.00 0.00 0.00 2.74
1646 1707 4.406649 CCCCCTTTCTGTATGATTTGCATT 59.593 41.667 0.00 0.00 38.44 3.56
1649 1710 6.314400 CCCCTTTCTGTATGATTTGCATTTTG 59.686 38.462 0.00 0.00 38.44 2.44
1650 1711 6.183360 CCCTTTCTGTATGATTTGCATTTTGC 60.183 38.462 0.00 0.00 45.29 3.68
1651 1712 6.183360 CCTTTCTGTATGATTTGCATTTTGCC 60.183 38.462 0.00 0.00 44.23 4.52
1667 1728 4.846779 TTTGCCCACAATGAACTTACTC 57.153 40.909 0.00 0.00 35.21 2.59
1668 1729 2.422597 TGCCCACAATGAACTTACTCG 58.577 47.619 0.00 0.00 0.00 4.18
1674 1735 6.292919 GCCCACAATGAACTTACTCGATAATC 60.293 42.308 0.00 0.00 0.00 1.75
1689 1750 3.804325 CGATAATCGATTGAGTGGCAAGT 59.196 43.478 20.87 0.00 43.74 3.16
1701 1764 3.929610 GAGTGGCAAGTCTTACTAAGCTG 59.070 47.826 0.00 0.00 32.22 4.24
1723 1786 5.734720 TGTAGTTGGATTAGCTCTGGAAAG 58.265 41.667 0.00 0.00 0.00 2.62
1734 1797 2.158885 GCTCTGGAAAGGGTAGGATGTC 60.159 54.545 0.00 0.00 0.00 3.06
1740 1803 7.136885 TCTGGAAAGGGTAGGATGTCTATTTA 58.863 38.462 0.00 0.00 0.00 1.40
1789 1853 7.125792 AGGTACTGGAGTGAATACTTTATGG 57.874 40.000 0.00 0.00 37.18 2.74
1813 1877 6.808704 GGAATGATTGGAGTTTAACTTTGCTC 59.191 38.462 0.00 0.00 0.00 4.26
1866 1930 5.209240 CGTGAAATAAAAACGAAGGCTGAA 58.791 37.500 0.00 0.00 39.64 3.02
1899 1963 1.533625 TGGTTCAAGAAATCTGCCGG 58.466 50.000 0.00 0.00 0.00 6.13
1905 1969 2.503765 TCAAGAAATCTGCCGGGACATA 59.496 45.455 2.18 0.00 0.00 2.29
1908 1972 3.545703 AGAAATCTGCCGGGACATAAAG 58.454 45.455 2.18 0.00 0.00 1.85
1993 2057 6.628919 TGCTTGGTTAGTTTCTTTACTTCC 57.371 37.500 0.00 0.00 0.00 3.46
2008 2072 9.511272 TTCTTTACTTCCCTTTATTTGGAGTAC 57.489 33.333 0.00 0.00 30.91 2.73
2010 2074 4.259356 ACTTCCCTTTATTTGGAGTACGC 58.741 43.478 0.00 0.00 30.91 4.42
2015 2079 3.244579 CCTTTATTTGGAGTACGCGCTAC 59.755 47.826 5.73 8.42 0.00 3.58
2028 2092 2.096417 ACGCGCTACTGTGCTTAAAAAG 60.096 45.455 5.73 0.00 46.58 2.27
2039 2103 6.476706 ACTGTGCTTAAAAAGAAATGTTCAGC 59.523 34.615 0.00 0.00 0.00 4.26
2081 2145 9.745018 ACCTAAGCTAATTCATAATGTGCATAT 57.255 29.630 0.00 0.00 0.00 1.78
2175 2239 2.095364 ACAACTCGAGGTAAGCGTGTAG 60.095 50.000 18.41 0.00 34.84 2.74
2274 2338 1.901159 TGGCATGCTGGTGCTTTTATT 59.099 42.857 18.92 0.00 44.45 1.40
2336 2400 1.239968 CCTTCAGGCAGTGAACCAGC 61.240 60.000 0.00 0.00 40.45 4.85
2559 2623 5.880332 GCAAATGACAGTTAATCCCTGAGTA 59.120 40.000 0.00 0.00 34.04 2.59
2575 2639 4.021016 CCTGAGTAAGCTAGAAACAGGTGT 60.021 45.833 14.55 0.00 38.67 4.16
2657 2721 1.666189 GAGTGAGGTTTTATCAGCGGC 59.334 52.381 0.00 0.00 0.00 6.53
2762 2826 1.550130 TACTTTCCCTGCTGGACCGG 61.550 60.000 11.88 0.00 45.11 5.28
2820 2884 1.336240 GGGAACACATTGAAGCACTGC 60.336 52.381 0.00 0.00 0.00 4.40
2940 3004 8.626917 TGGAGGGAGTATTTATTAACCAACTA 57.373 34.615 0.00 0.00 0.00 2.24
3539 3604 6.124340 ACATCCTCTTTTATGCATCATGTCA 58.876 36.000 0.19 0.00 0.00 3.58
3599 3664 8.818141 TTATTATCTTCTGCTGGACGAATTAG 57.182 34.615 0.00 0.00 0.00 1.73
3636 3701 1.216678 TGCTTCTTTTCCAGGACCCAA 59.783 47.619 0.00 0.00 0.00 4.12
3687 3752 4.935352 AAAGCCAGATGTTGCAACTTTA 57.065 36.364 28.61 10.80 0.00 1.85
3853 3918 6.662755 TGGTTTCATCTTGCTTCTGGTATAT 58.337 36.000 0.00 0.00 0.00 0.86
4044 4110 1.785041 TTCTGCGCCAAACACTCTGC 61.785 55.000 4.18 0.00 0.00 4.26
4050 4116 0.179215 GCCAAACACTCTGCGATTCG 60.179 55.000 0.62 0.62 0.00 3.34
4137 4203 0.456221 ACCACGACTGCTCGGAATAG 59.544 55.000 0.18 0.00 44.80 1.73
4281 4347 4.991056 TGCTTACTTGCTTAGTCTCAACTG 59.009 41.667 0.00 0.00 38.33 3.16
4698 4764 4.350520 TGGCAGGAAGAAAAATGGGAAATT 59.649 37.500 0.00 0.00 0.00 1.82
4763 4829 7.522236 GCAGGTATGGGAAATAATTCTTGCTAC 60.522 40.741 0.00 0.00 35.79 3.58
4842 4908 3.369546 AGATTGGTCAAAACTTTGCCG 57.630 42.857 0.00 0.00 37.25 5.69
4845 4911 0.457851 TGGTCAAAACTTTGCCGGTG 59.542 50.000 1.90 0.00 37.25 4.94
4859 4925 2.432874 TGCCGGTGTGCTATAACTATGT 59.567 45.455 1.90 0.00 0.00 2.29
4861 4927 3.875134 GCCGGTGTGCTATAACTATGTTT 59.125 43.478 1.90 0.00 0.00 2.83
4863 4929 4.873827 CCGGTGTGCTATAACTATGTTTGT 59.126 41.667 0.00 0.00 0.00 2.83
4962 5028 9.880157 ATTATGTTAATCTGCTTTGCAATTTCT 57.120 25.926 0.00 0.00 38.41 2.52
5164 5231 3.684788 GCGCACCTCTCAGATTTTCTTTA 59.315 43.478 0.30 0.00 0.00 1.85
5251 5318 0.983467 TGCTTGATCCAGGTGTGCTA 59.017 50.000 0.00 0.00 0.00 3.49
5252 5319 1.350684 TGCTTGATCCAGGTGTGCTAA 59.649 47.619 0.00 0.00 0.00 3.09
5364 5436 9.941664 CAATGTCTAATGTTGATTCTTATCCAC 57.058 33.333 0.00 0.00 0.00 4.02
5726 5798 5.051708 GGTTGCTTTTCGATCACTTGTTTTC 60.052 40.000 0.00 0.00 0.00 2.29
5887 5959 7.514721 TGGTAGGTGTAGAAGAAAACAGAAAT 58.485 34.615 0.00 0.00 0.00 2.17
6089 6161 7.690228 TGTGTCATAAATTATTACCGCACTTC 58.310 34.615 0.00 0.00 0.00 3.01
6090 6162 7.334671 TGTGTCATAAATTATTACCGCACTTCA 59.665 33.333 0.00 0.00 0.00 3.02
6091 6163 8.178964 GTGTCATAAATTATTACCGCACTTCAA 58.821 33.333 0.00 0.00 0.00 2.69
6157 6230 6.442952 CAACATTGGTTACTTTTGGAATCGA 58.557 36.000 0.00 0.00 34.87 3.59
6164 6237 2.514803 ACTTTTGGAATCGAACCCCTG 58.485 47.619 9.06 1.53 0.00 4.45
6492 6565 1.021968 GTCTCGGTGCAAAGTTGGTT 58.978 50.000 0.00 0.00 0.00 3.67
6508 6581 0.912006 GGTTGGAGGAGAGGGAAGCT 60.912 60.000 0.00 0.00 0.00 3.74
6676 6749 2.561569 AGTTTTCTGACAAGGTGGACG 58.438 47.619 0.00 0.00 0.00 4.79
6946 7019 5.351948 TTTTGCCAAATCCCCTTTATAGC 57.648 39.130 0.00 0.00 0.00 2.97
6951 7024 3.636764 CCAAATCCCCTTTATAGCACACC 59.363 47.826 0.00 0.00 0.00 4.16
7089 7162 8.302438 TCACATATCTCATAGCTGATGTAGTTG 58.698 37.037 0.00 0.00 36.84 3.16
7158 7236 2.441750 TGGGGTCTGTATTATGGGAAGC 59.558 50.000 0.00 0.00 0.00 3.86
7267 7345 0.031585 CGAAGTTATCGCCCCATCGA 59.968 55.000 0.00 0.00 45.89 3.59
7382 7461 5.577835 TCAGTTCATTGAAAGTTTGGAACG 58.422 37.500 0.00 0.39 39.53 3.95
7496 7680 3.992943 TCCATTCCAGGTACGTGAATT 57.007 42.857 16.93 0.00 32.71 2.17
7638 7822 6.715264 CCTTGTAGGTCCTTATCACTTGTTTT 59.285 38.462 0.00 0.00 0.00 2.43
7639 7823 7.230712 CCTTGTAGGTCCTTATCACTTGTTTTT 59.769 37.037 0.00 0.00 0.00 1.94
7646 7830 9.010029 GGTCCTTATCACTTGTTTTTCTATCAA 57.990 33.333 0.00 0.00 0.00 2.57
7848 8032 6.409524 TTGTTTCTTCAGATGCTTTTGGAT 57.590 33.333 0.00 0.00 0.00 3.41
7914 8098 3.004419 GGAAACAGGTAACCTTGTCTTGC 59.996 47.826 0.00 0.00 37.17 4.01
7953 8138 2.230508 GCCATACTGCATAGCCTACGTA 59.769 50.000 0.00 0.00 0.00 3.57
8060 8254 6.543430 AAGAAATTGGCCATGCAAATAGTA 57.457 33.333 6.09 0.00 29.96 1.82
8121 8315 0.529378 GAAGGTTGGCAGCCAATGAG 59.471 55.000 29.79 0.00 45.80 2.90
8128 8322 0.459585 GGCAGCCAATGAGTGCAATG 60.460 55.000 6.55 0.00 39.05 2.82
8149 8343 3.870419 TGAATTTGCTTTGTTGGCTTCAC 59.130 39.130 0.00 0.00 0.00 3.18
8191 9225 7.920682 CACTTTATACTTGGTTGCAAAAAGACT 59.079 33.333 23.20 14.42 0.00 3.24
8222 9256 4.084433 TGCGTTATTTTTCGTACCTCACAC 60.084 41.667 0.00 0.00 0.00 3.82
8229 9264 3.547054 TTCGTACCTCACACTTGGTTT 57.453 42.857 0.00 0.00 37.74 3.27
8332 9367 6.041523 CACTCCTCAAGGTAAATTGGGAAAAA 59.958 38.462 0.00 0.00 31.97 1.94
8396 9432 3.694072 GCACTTTGCATTACACCCAGATA 59.306 43.478 0.00 0.00 44.26 1.98
8413 9449 6.558775 ACCCAGATAGGATCAAGCTAATAACA 59.441 38.462 0.00 0.00 41.22 2.41
8456 9492 2.030805 GTCACCAGTTGATTCTGTTGCC 60.031 50.000 0.00 0.00 36.32 4.52
8471 9507 1.189524 TTGCCAGTACCTACCGTGCT 61.190 55.000 0.00 0.00 38.03 4.40
8519 9555 3.003480 GTTTCAGCGGATACTTGAGCTT 58.997 45.455 0.48 0.00 37.94 3.74
8526 9562 3.939592 GCGGATACTTGAGCTTAAGGTTT 59.060 43.478 21.04 6.40 31.94 3.27
8538 9574 8.956533 TGAGCTTAAGGTTTTTGCTTAAAAAT 57.043 26.923 8.87 0.00 37.59 1.82
8539 9575 9.389755 TGAGCTTAAGGTTTTTGCTTAAAAATT 57.610 25.926 8.87 1.69 37.59 1.82
8542 9578 9.995957 GCTTAAGGTTTTTGCTTAAAAATTTGA 57.004 25.926 4.29 0.00 37.59 2.69
8555 9593 8.795341 GCTTAAAAATTTGAACTCCTTATACGC 58.205 33.333 0.00 0.00 0.00 4.42
8574 9612 1.651240 CCAGGTGCAGCTTTCCATCG 61.651 60.000 17.45 2.69 0.00 3.84
8593 9632 2.006888 CGGTATGGTTGCCTAACACAG 58.993 52.381 0.00 0.00 38.58 3.66
8594 9633 1.743394 GGTATGGTTGCCTAACACAGC 59.257 52.381 0.00 0.00 38.58 4.40
8607 9646 5.455392 CCTAACACAGCTTCATTGTTTCTG 58.545 41.667 5.38 0.00 35.18 3.02
8684 9723 2.945668 GGAAGACTTCAACAAGCACAGT 59.054 45.455 16.85 0.00 32.09 3.55
9178 10217 4.336713 GGACATTCTGTTGGAGGAATAAGC 59.663 45.833 0.00 0.00 31.86 3.09
9212 10252 4.055654 GGCTCAAGATCGCCCATC 57.944 61.111 0.00 0.00 40.43 3.51
9257 10297 5.527511 TTTGCATGCATAAAATTTGTCCG 57.472 34.783 23.37 0.00 0.00 4.79
9263 10303 6.348050 GCATGCATAAAATTTGTCCGGAAAAA 60.348 34.615 21.96 21.96 0.00 1.94
9264 10304 7.626028 GCATGCATAAAATTTGTCCGGAAAAAT 60.626 33.333 24.40 24.40 0.00 1.82
9265 10305 7.736447 TGCATAAAATTTGTCCGGAAAAATT 57.264 28.000 31.40 31.40 37.54 1.82
9400 10630 3.487372 AGCAAAAGTTAGGAGTGGAACC 58.513 45.455 0.00 0.00 37.80 3.62
9401 10631 2.557056 GCAAAAGTTAGGAGTGGAACCC 59.443 50.000 0.00 0.00 37.80 4.11
9424 10654 4.537135 TTTTTAGATCAGCACTCCGTCT 57.463 40.909 0.00 0.00 0.00 4.18
9425 10655 3.510388 TTTAGATCAGCACTCCGTCTG 57.490 47.619 0.00 0.00 0.00 3.51
9540 10770 6.533012 GGGAGTAGTAGTTTAACCGAACATTC 59.467 42.308 0.00 0.00 31.94 2.67
9542 10772 6.401394 AGTAGTAGTTTAACCGAACATTCCC 58.599 40.000 0.00 0.00 31.94 3.97
9543 10773 5.494390 AGTAGTTTAACCGAACATTCCCT 57.506 39.130 0.00 0.00 31.94 4.20
9551 10781 2.374170 ACCGAACATTCCCTGGTTAGTT 59.626 45.455 0.00 0.00 0.00 2.24
9552 10782 3.181437 ACCGAACATTCCCTGGTTAGTTT 60.181 43.478 0.00 0.00 0.00 2.66
9553 10783 3.439129 CCGAACATTCCCTGGTTAGTTTC 59.561 47.826 0.00 0.00 0.00 2.78
9578 10810 0.108585 TTGAAGGGACCTGACAGTGC 59.891 55.000 0.93 0.00 0.00 4.40
9579 10811 0.764369 TGAAGGGACCTGACAGTGCT 60.764 55.000 0.93 0.00 0.00 4.40
9596 10837 2.799412 GTGCTAATCTGATCCTTGAGCG 59.201 50.000 0.00 0.00 0.00 5.03
9601 10842 5.238214 GCTAATCTGATCCTTGAGCGAAATT 59.762 40.000 0.00 0.00 0.00 1.82
9602 10843 5.747951 AATCTGATCCTTGAGCGAAATTC 57.252 39.130 0.00 0.00 0.00 2.17
9603 10844 4.206477 TCTGATCCTTGAGCGAAATTCA 57.794 40.909 0.00 0.00 0.00 2.57
9604 10845 3.935203 TCTGATCCTTGAGCGAAATTCAC 59.065 43.478 0.00 0.00 0.00 3.18
9605 10846 2.672874 TGATCCTTGAGCGAAATTCACG 59.327 45.455 0.00 1.48 0.00 4.35
9606 10847 1.438651 TCCTTGAGCGAAATTCACGG 58.561 50.000 7.02 0.00 35.82 4.94
9607 10848 1.001520 TCCTTGAGCGAAATTCACGGA 59.998 47.619 7.02 0.00 39.74 4.69
9608 10849 2.009774 CCTTGAGCGAAATTCACGGAT 58.990 47.619 7.02 0.00 36.39 4.18
9609 10850 2.420022 CCTTGAGCGAAATTCACGGATT 59.580 45.455 7.02 0.00 36.39 3.01
9610 10851 3.621268 CCTTGAGCGAAATTCACGGATTA 59.379 43.478 7.02 0.00 36.39 1.75
9611 10852 4.494199 CCTTGAGCGAAATTCACGGATTAC 60.494 45.833 7.02 0.00 36.39 1.89
9612 10853 3.857052 TGAGCGAAATTCACGGATTACT 58.143 40.909 7.02 0.00 0.00 2.24
9613 10854 4.250464 TGAGCGAAATTCACGGATTACTT 58.750 39.130 7.02 0.00 0.00 2.24
9614 10855 4.693566 TGAGCGAAATTCACGGATTACTTT 59.306 37.500 7.02 0.00 0.00 2.66
9615 10856 5.180492 TGAGCGAAATTCACGGATTACTTTT 59.820 36.000 7.02 0.00 0.00 2.27
9616 10857 6.009115 AGCGAAATTCACGGATTACTTTTT 57.991 33.333 7.02 0.00 0.00 1.94
9702 10950 2.572104 GGCCATCCGTCTCCCTTATAAT 59.428 50.000 0.00 0.00 0.00 1.28
9704 10952 4.224370 GGCCATCCGTCTCCCTTATAATAA 59.776 45.833 0.00 0.00 0.00 1.40
9706 10954 5.420409 CCATCCGTCTCCCTTATAATAAGC 58.580 45.833 0.00 0.00 0.00 3.09
9707 10955 4.778534 TCCGTCTCCCTTATAATAAGCG 57.221 45.455 0.00 0.00 0.00 4.68
9709 10957 3.508793 CCGTCTCCCTTATAATAAGCGGA 59.491 47.826 13.33 0.00 37.92 5.54
9711 10959 4.483311 GTCTCCCTTATAATAAGCGGACG 58.517 47.826 0.00 0.00 0.00 4.79
9712 10960 4.217118 GTCTCCCTTATAATAAGCGGACGA 59.783 45.833 0.00 0.00 0.00 4.20
9713 10961 4.217118 TCTCCCTTATAATAAGCGGACGAC 59.783 45.833 0.00 0.00 0.00 4.34
9715 10963 3.257624 CCCTTATAATAAGCGGACGACCT 59.742 47.826 1.72 0.00 0.00 3.85
9716 10964 4.262335 CCCTTATAATAAGCGGACGACCTT 60.262 45.833 1.72 0.00 0.00 3.50
9717 10965 4.922103 CCTTATAATAAGCGGACGACCTTC 59.078 45.833 1.72 0.00 0.00 3.46
9718 10966 2.877043 TAATAAGCGGACGACCTTCC 57.123 50.000 1.72 0.00 0.00 3.46
9784 12679 0.173708 AGCCGTCAAGCAGCTACTAC 59.826 55.000 0.00 0.00 34.38 2.73
9785 12680 1.140407 GCCGTCAAGCAGCTACTACG 61.140 60.000 14.23 14.23 0.00 3.51
9787 12682 1.399440 CCGTCAAGCAGCTACTACGTA 59.601 52.381 17.84 0.00 0.00 3.57
9788 12683 2.438583 CGTCAAGCAGCTACTACGTAC 58.561 52.381 13.35 0.00 0.00 3.67
9789 12684 2.095532 CGTCAAGCAGCTACTACGTACT 59.904 50.000 13.35 0.00 0.00 2.73
9790 12685 3.308053 CGTCAAGCAGCTACTACGTACTA 59.692 47.826 13.35 0.00 0.00 1.82
9791 12686 4.550447 CGTCAAGCAGCTACTACGTACTAG 60.550 50.000 13.35 0.00 0.00 2.57
9792 12687 4.332268 GTCAAGCAGCTACTACGTACTAGT 59.668 45.833 0.00 0.00 39.24 2.57
9793 12688 4.331992 TCAAGCAGCTACTACGTACTAGTG 59.668 45.833 5.39 8.34 36.29 2.74
9794 12689 4.134379 AGCAGCTACTACGTACTAGTGA 57.866 45.455 5.39 0.00 36.29 3.41
9795 12690 4.121317 AGCAGCTACTACGTACTAGTGAG 58.879 47.826 5.39 1.53 36.29 3.51
9811 12706 1.118965 TGAGGTGAGGTCCGCTCAAA 61.119 55.000 0.00 0.00 32.15 2.69
9814 12709 0.875059 GGTGAGGTCCGCTCAAAAAG 59.125 55.000 0.00 0.00 32.15 2.27
9820 12715 4.202010 TGAGGTCCGCTCAAAAAGAAAAAG 60.202 41.667 0.00 0.00 0.00 2.27
9822 12717 4.401202 AGGTCCGCTCAAAAAGAAAAAGAA 59.599 37.500 0.00 0.00 0.00 2.52
9823 12718 4.740205 GGTCCGCTCAAAAAGAAAAAGAAG 59.260 41.667 0.00 0.00 0.00 2.85
9824 12719 5.449999 GGTCCGCTCAAAAAGAAAAAGAAGA 60.450 40.000 0.00 0.00 0.00 2.87
9825 12720 6.033966 GTCCGCTCAAAAAGAAAAAGAAGAA 58.966 36.000 0.00 0.00 0.00 2.52
9826 12721 6.197282 GTCCGCTCAAAAAGAAAAAGAAGAAG 59.803 38.462 0.00 0.00 0.00 2.85
9827 12722 6.094881 TCCGCTCAAAAAGAAAAAGAAGAAGA 59.905 34.615 0.00 0.00 0.00 2.87
9828 12723 6.751888 CCGCTCAAAAAGAAAAAGAAGAAGAA 59.248 34.615 0.00 0.00 0.00 2.52
9829 12724 7.043788 CCGCTCAAAAAGAAAAAGAAGAAGAAG 60.044 37.037 0.00 0.00 0.00 2.85
9830 12725 7.698130 CGCTCAAAAAGAAAAAGAAGAAGAAGA 59.302 33.333 0.00 0.00 0.00 2.87
9831 12726 9.358872 GCTCAAAAAGAAAAAGAAGAAGAAGAA 57.641 29.630 0.00 0.00 0.00 2.52
9861 12756 4.351874 AAAAAGCAGCTAGTGAGGTACA 57.648 40.909 0.00 0.00 0.00 2.90
9862 12757 3.601443 AAAGCAGCTAGTGAGGTACAG 57.399 47.619 0.00 0.00 0.00 2.74
9863 12758 2.223803 AGCAGCTAGTGAGGTACAGT 57.776 50.000 0.00 0.00 36.09 3.55
9864 12759 3.367646 AGCAGCTAGTGAGGTACAGTA 57.632 47.619 0.00 0.00 33.78 2.74
9877 12772 8.812972 AGTGAGGTACAGTAGAACAAATAATCA 58.187 33.333 0.00 0.00 0.00 2.57
9878 12773 9.431887 GTGAGGTACAGTAGAACAAATAATCAA 57.568 33.333 0.00 0.00 0.00 2.57
9888 12783 9.490663 GTAGAACAAATAATCAAAGTGAATCGG 57.509 33.333 0.00 0.00 0.00 4.18
9889 12784 8.335532 AGAACAAATAATCAAAGTGAATCGGA 57.664 30.769 0.00 0.00 0.00 4.55
9890 12785 8.792633 AGAACAAATAATCAAAGTGAATCGGAA 58.207 29.630 0.00 0.00 0.00 4.30
9891 12786 8.742554 AACAAATAATCAAAGTGAATCGGAAC 57.257 30.769 0.00 0.00 0.00 3.62
9892 12787 7.881142 ACAAATAATCAAAGTGAATCGGAACA 58.119 30.769 0.00 0.00 0.00 3.18
9893 12788 8.356657 ACAAATAATCAAAGTGAATCGGAACAA 58.643 29.630 0.00 0.00 0.00 2.83
9894 12789 8.853345 CAAATAATCAAAGTGAATCGGAACAAG 58.147 33.333 0.00 0.00 0.00 3.16
9895 12790 7.687941 ATAATCAAAGTGAATCGGAACAAGT 57.312 32.000 0.00 0.00 0.00 3.16
9896 12791 8.786826 ATAATCAAAGTGAATCGGAACAAGTA 57.213 30.769 0.00 0.00 0.00 2.24
9897 12792 5.917541 TCAAAGTGAATCGGAACAAGTAC 57.082 39.130 0.00 0.00 0.00 2.73
9898 12793 4.753107 TCAAAGTGAATCGGAACAAGTACC 59.247 41.667 0.00 0.00 0.00 3.34
9899 12794 4.345859 AAGTGAATCGGAACAAGTACCA 57.654 40.909 0.00 0.00 0.00 3.25
9900 12795 4.345859 AGTGAATCGGAACAAGTACCAA 57.654 40.909 0.00 0.00 0.00 3.67
9901 12796 4.062991 AGTGAATCGGAACAAGTACCAAC 58.937 43.478 0.00 0.00 0.00 3.77
9902 12797 3.810941 GTGAATCGGAACAAGTACCAACA 59.189 43.478 0.00 0.00 0.00 3.33
9903 12798 4.062293 TGAATCGGAACAAGTACCAACAG 58.938 43.478 0.00 0.00 0.00 3.16
9904 12799 2.536761 TCGGAACAAGTACCAACAGG 57.463 50.000 0.00 0.00 0.00 4.00
9905 12800 1.071071 TCGGAACAAGTACCAACAGGG 59.929 52.381 0.00 0.00 44.81 4.45
9919 12814 5.622770 CCAACAGGGTATCAAACAACTAC 57.377 43.478 0.00 0.00 0.00 2.73
9920 12815 5.313712 CCAACAGGGTATCAAACAACTACT 58.686 41.667 0.00 0.00 0.00 2.57
9921 12816 5.411669 CCAACAGGGTATCAAACAACTACTC 59.588 44.000 0.00 0.00 0.00 2.59
9922 12817 5.161943 ACAGGGTATCAAACAACTACTCC 57.838 43.478 0.00 0.00 0.00 3.85
9923 12818 4.019591 ACAGGGTATCAAACAACTACTCCC 60.020 45.833 0.00 0.00 0.00 4.30
9924 12819 4.225267 CAGGGTATCAAACAACTACTCCCT 59.775 45.833 0.00 0.00 42.75 4.20
9925 12820 4.470304 AGGGTATCAAACAACTACTCCCTC 59.530 45.833 0.00 0.00 38.37 4.30
9926 12821 4.470304 GGGTATCAAACAACTACTCCCTCT 59.530 45.833 0.00 0.00 0.00 3.69
9927 12822 5.420409 GGTATCAAACAACTACTCCCTCTG 58.580 45.833 0.00 0.00 0.00 3.35
9928 12823 5.046520 GGTATCAAACAACTACTCCCTCTGT 60.047 44.000 0.00 0.00 0.00 3.41
9929 12824 6.154021 GGTATCAAACAACTACTCCCTCTGTA 59.846 42.308 0.00 0.00 0.00 2.74
9930 12825 6.681729 ATCAAACAACTACTCCCTCTGTAA 57.318 37.500 0.00 0.00 0.00 2.41
9931 12826 6.488769 TCAAACAACTACTCCCTCTGTAAA 57.511 37.500 0.00 0.00 0.00 2.01
9932 12827 6.285990 TCAAACAACTACTCCCTCTGTAAAC 58.714 40.000 0.00 0.00 0.00 2.01
9933 12828 6.099269 TCAAACAACTACTCCCTCTGTAAACT 59.901 38.462 0.00 0.00 0.00 2.66
9934 12829 7.288389 TCAAACAACTACTCCCTCTGTAAACTA 59.712 37.037 0.00 0.00 0.00 2.24
9935 12830 7.607615 AACAACTACTCCCTCTGTAAACTAA 57.392 36.000 0.00 0.00 0.00 2.24
9936 12831 7.793948 ACAACTACTCCCTCTGTAAACTAAT 57.206 36.000 0.00 0.00 0.00 1.73
9937 12832 8.890410 ACAACTACTCCCTCTGTAAACTAATA 57.110 34.615 0.00 0.00 0.00 0.98
9938 12833 9.490083 ACAACTACTCCCTCTGTAAACTAATAT 57.510 33.333 0.00 0.00 0.00 1.28
9944 12839 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
9946 12841 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.854496 TGTGTAGTTCATTTGGTACTGTTC 57.146 37.500 0.00 0.00 0.00 3.18
5 6 6.146510 TGTCGATTGTGTAGTTCATTTGGTAC 59.853 38.462 0.00 0.00 0.00 3.34
6 7 6.146510 GTGTCGATTGTGTAGTTCATTTGGTA 59.853 38.462 0.00 0.00 0.00 3.25
27 28 5.051240 AGTCGATACAAGTTTTCGTTGTGTC 60.051 40.000 0.00 3.42 40.64 3.67
35 37 5.220605 GGTGGCATAGTCGATACAAGTTTTC 60.221 44.000 0.00 0.00 0.00 2.29
70 72 5.064579 TGCTCATGTAATTGTTGTATGGTCG 59.935 40.000 0.00 0.00 0.00 4.79
109 111 0.451783 GGACTGCAAAGCGGGTATTG 59.548 55.000 2.60 0.00 39.57 1.90
263 267 0.873054 CATCATCAAGCCCTCGCATC 59.127 55.000 0.00 0.00 37.52 3.91
313 317 2.921121 CACGTAGCTTCTAACGCATTCA 59.079 45.455 6.67 0.00 42.74 2.57
314 318 2.285084 GCACGTAGCTTCTAACGCATTC 60.285 50.000 6.67 0.00 42.74 2.67
316 320 1.278238 GCACGTAGCTTCTAACGCAT 58.722 50.000 6.67 0.00 42.74 4.73
335 339 1.544825 TTGGTGGAGGAAGAGCCGAG 61.545 60.000 0.00 0.00 43.43 4.63
366 370 1.202879 TCAAGGTTGGCGAGTTCCAAT 60.203 47.619 0.00 0.00 46.64 3.16
402 406 8.255905 GGAGTACATAAGCTTCTAAAACCTACA 58.744 37.037 0.00 0.00 0.00 2.74
424 428 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
425 429 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
426 430 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
427 431 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
428 432 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
429 433 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
430 434 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
431 435 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
432 436 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
433 437 7.094762 ACGAATCTAAGACAAGAATTTTGGGAC 60.095 37.037 0.00 0.00 0.00 4.46
434 438 6.940298 ACGAATCTAAGACAAGAATTTTGGGA 59.060 34.615 0.00 0.00 0.00 4.37
435 439 7.119846 AGACGAATCTAAGACAAGAATTTTGGG 59.880 37.037 0.00 0.00 31.46 4.12
436 440 8.034058 AGACGAATCTAAGACAAGAATTTTGG 57.966 34.615 0.00 0.00 31.46 3.28
442 446 8.549548 CGTATCTAGACGAATCTAAGACAAGAA 58.450 37.037 0.00 0.00 45.82 2.52
443 447 7.171167 CCGTATCTAGACGAATCTAAGACAAGA 59.829 40.741 5.60 0.00 45.82 3.02
444 448 7.171167 TCCGTATCTAGACGAATCTAAGACAAG 59.829 40.741 5.60 0.00 45.82 3.16
445 449 6.988580 TCCGTATCTAGACGAATCTAAGACAA 59.011 38.462 5.60 0.00 45.82 3.18
446 450 6.519382 TCCGTATCTAGACGAATCTAAGACA 58.481 40.000 5.60 0.00 45.82 3.41
447 451 7.118101 ACATCCGTATCTAGACGAATCTAAGAC 59.882 40.741 5.60 0.00 45.82 3.01
448 452 7.160049 ACATCCGTATCTAGACGAATCTAAGA 58.840 38.462 5.60 0.00 45.82 2.10
449 453 7.367159 ACATCCGTATCTAGACGAATCTAAG 57.633 40.000 5.60 0.00 45.82 2.18
465 469 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
466 470 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
467 471 9.622004 ATCACGTTTTAGTATTAGATACATCCG 57.378 33.333 0.00 0.00 38.21 4.18
511 515 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
512 516 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
513 517 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
514 518 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
515 519 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
516 520 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
517 521 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
518 522 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
519 523 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
520 524 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
521 525 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
522 526 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
523 527 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
524 528 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
525 529 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
526 530 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
527 531 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
528 532 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
529 533 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
530 534 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
531 535 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
532 536 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
533 537 3.339713 AATATACTCCCTCCGTCCCAA 57.660 47.619 0.00 0.00 0.00 4.12
534 538 2.969950 CAAATATACTCCCTCCGTCCCA 59.030 50.000 0.00 0.00 0.00 4.37
535 539 3.236896 TCAAATATACTCCCTCCGTCCC 58.763 50.000 0.00 0.00 0.00 4.46
536 540 4.950205 TTCAAATATACTCCCTCCGTCC 57.050 45.455 0.00 0.00 0.00 4.79
537 541 7.488471 CGAATATTCAAATATACTCCCTCCGTC 59.512 40.741 15.57 0.00 31.57 4.79
538 542 7.039223 ACGAATATTCAAATATACTCCCTCCGT 60.039 37.037 15.57 0.00 31.57 4.69
539 543 7.321153 ACGAATATTCAAATATACTCCCTCCG 58.679 38.462 15.57 0.00 31.57 4.63
540 544 9.583765 GTACGAATATTCAAATATACTCCCTCC 57.416 37.037 15.57 0.00 31.57 4.30
541 545 9.583765 GGTACGAATATTCAAATATACTCCCTC 57.416 37.037 15.57 0.00 31.57 4.30
542 546 9.096823 TGGTACGAATATTCAAATATACTCCCT 57.903 33.333 15.57 0.00 31.57 4.20
543 547 9.886132 ATGGTACGAATATTCAAATATACTCCC 57.114 33.333 15.57 3.22 31.57 4.30
567 571 7.749570 GCATGCAGAATTAGTGAGCTAATAATG 59.250 37.037 14.21 4.60 44.60 1.90
620 625 4.088648 GGTCGAGTAAAATGAAATGCACG 58.911 43.478 0.00 0.00 0.00 5.34
667 675 3.512680 CCGAACTTCATCACTGGTAGTC 58.487 50.000 0.00 0.00 0.00 2.59
675 683 2.996621 CTCTGAACCCGAACTTCATCAC 59.003 50.000 0.00 0.00 0.00 3.06
676 684 2.612972 GCTCTGAACCCGAACTTCATCA 60.613 50.000 0.00 0.00 0.00 3.07
677 685 2.003301 GCTCTGAACCCGAACTTCATC 58.997 52.381 0.00 0.00 0.00 2.92
678 686 1.347707 TGCTCTGAACCCGAACTTCAT 59.652 47.619 0.00 0.00 0.00 2.57
1171 1188 4.608948 AAACCCTATAATCCTCGAGCAG 57.391 45.455 6.99 0.00 0.00 4.24
1314 1331 4.379243 CGAGCCCGAACCTGCTGT 62.379 66.667 0.00 0.00 38.11 4.40
1327 1344 2.776312 TGGATCACGAGATAACGAGC 57.224 50.000 0.00 0.00 33.72 5.03
1333 1350 5.069119 ACTGCTACAAATGGATCACGAGATA 59.931 40.000 0.00 0.00 33.72 1.98
1337 1354 3.261580 CACTGCTACAAATGGATCACGA 58.738 45.455 0.00 0.00 0.00 4.35
1342 1359 3.507233 CCACAACACTGCTACAAATGGAT 59.493 43.478 0.00 0.00 0.00 3.41
1351 1368 0.179070 TGCGAACCACAACACTGCTA 60.179 50.000 0.00 0.00 0.00 3.49
1352 1369 1.029408 TTGCGAACCACAACACTGCT 61.029 50.000 0.00 0.00 0.00 4.24
1364 1381 1.571919 AGAGCGTGGATATTGCGAAC 58.428 50.000 0.00 0.00 0.00 3.95
1367 1384 1.595489 GCAAAGAGCGTGGATATTGCG 60.595 52.381 0.00 0.00 34.57 4.85
1379 1396 5.798934 CACATCAGTTCTAAATGCAAAGAGC 59.201 40.000 0.00 0.00 45.96 4.09
1390 1407 9.214957 CCAAAGTACATAACACATCAGTTCTAA 57.785 33.333 0.00 0.00 33.07 2.10
1391 1408 8.372459 ACCAAAGTACATAACACATCAGTTCTA 58.628 33.333 0.00 0.00 33.07 2.10
1392 1409 7.224297 ACCAAAGTACATAACACATCAGTTCT 58.776 34.615 0.00 0.00 33.07 3.01
1393 1410 7.435068 ACCAAAGTACATAACACATCAGTTC 57.565 36.000 0.00 0.00 33.07 3.01
1409 1443 5.048504 CACACTACTTCCTCGTACCAAAGTA 60.049 44.000 0.00 0.00 34.09 2.24
1418 1452 5.889853 TCATAATACCACACTACTTCCTCGT 59.110 40.000 0.00 0.00 0.00 4.18
1420 1454 7.952671 TCATCATAATACCACACTACTTCCTC 58.047 38.462 0.00 0.00 0.00 3.71
1423 1457 7.657354 TGCATCATCATAATACCACACTACTTC 59.343 37.037 0.00 0.00 0.00 3.01
1425 1459 7.066307 TGCATCATCATAATACCACACTACT 57.934 36.000 0.00 0.00 0.00 2.57
1477 1511 6.418057 AAGCAAATACCAAACAATTCTGGA 57.582 33.333 5.03 0.00 36.49 3.86
1487 1548 9.149225 CATAAGCAACAATAAGCAAATACCAAA 57.851 29.630 0.00 0.00 0.00 3.28
1495 1556 9.184523 AGTATAACCATAAGCAACAATAAGCAA 57.815 29.630 0.00 0.00 0.00 3.91
1553 1614 2.005370 TGGTTCCCGAGTTACTCTGT 57.995 50.000 10.83 0.00 0.00 3.41
1595 1656 0.963962 CCTGAACAGCATTTGTGGCT 59.036 50.000 0.00 0.00 43.77 4.75
1616 1677 7.947782 AATCATACAGAAAGGGGGAAGTATA 57.052 36.000 0.00 0.00 0.00 1.47
1620 1681 4.098501 GCAAATCATACAGAAAGGGGGAAG 59.901 45.833 0.00 0.00 0.00 3.46
1623 1684 3.364549 TGCAAATCATACAGAAAGGGGG 58.635 45.455 0.00 0.00 0.00 5.40
1646 1707 3.252215 CGAGTAAGTTCATTGTGGGCAAA 59.748 43.478 0.00 0.00 38.21 3.68
1649 1710 2.695359 TCGAGTAAGTTCATTGTGGGC 58.305 47.619 0.00 0.00 0.00 5.36
1650 1711 6.074302 CGATTATCGAGTAAGTTCATTGTGGG 60.074 42.308 9.20 0.00 43.74 4.61
1651 1712 6.695713 TCGATTATCGAGTAAGTTCATTGTGG 59.304 38.462 13.66 0.00 44.82 4.17
1667 1728 3.804325 ACTTGCCACTCAATCGATTATCG 59.196 43.478 10.97 8.47 42.10 2.92
1668 1729 5.053145 AGACTTGCCACTCAATCGATTATC 58.947 41.667 10.97 0.00 33.57 1.75
1674 1735 3.589988 AGTAAGACTTGCCACTCAATCG 58.410 45.455 0.00 0.00 33.57 3.34
1689 1750 7.342284 AGCTAATCCAACTACAGCTTAGTAAGA 59.658 37.037 14.27 8.63 39.49 2.10
1701 1764 5.119694 CCTTTCCAGAGCTAATCCAACTAC 58.880 45.833 0.00 0.00 0.00 2.73
1723 1786 4.759953 TCCCCTAAATAGACATCCTACCC 58.240 47.826 0.00 0.00 0.00 3.69
1734 1797 6.102762 ACATCCTACCCTTTTCCCCTAAATAG 59.897 42.308 0.00 0.00 0.00 1.73
1740 1803 2.378308 ACATCCTACCCTTTTCCCCT 57.622 50.000 0.00 0.00 0.00 4.79
1785 1849 8.250332 GCAAAGTTAAACTCCAATCATTCCATA 58.750 33.333 0.00 0.00 0.00 2.74
1789 1853 7.540055 CAGAGCAAAGTTAAACTCCAATCATTC 59.460 37.037 0.00 0.00 0.00 2.67
1866 1930 6.279513 TCTTGAACCATTGTTTCACTTTGT 57.720 33.333 0.00 0.00 33.97 2.83
1899 1963 4.662145 CGCAATCCAACTTCTTTATGTCC 58.338 43.478 0.00 0.00 0.00 4.02
1905 1969 1.327303 TGGCGCAATCCAACTTCTTT 58.673 45.000 10.83 0.00 32.18 2.52
1908 1972 0.881118 TCTTGGCGCAATCCAACTTC 59.119 50.000 10.83 0.00 40.92 3.01
1993 2057 2.277084 AGCGCGTACTCCAAATAAAGG 58.723 47.619 8.43 0.00 0.00 3.11
2004 2068 0.806868 TAAGCACAGTAGCGCGTACT 59.193 50.000 8.43 11.56 43.31 2.73
2008 2072 2.156891 TCTTTTTAAGCACAGTAGCGCG 59.843 45.455 0.00 0.00 40.15 6.86
2010 2074 6.142817 ACATTTCTTTTTAAGCACAGTAGCG 58.857 36.000 0.00 0.00 40.15 4.26
2015 2079 6.476380 TGCTGAACATTTCTTTTTAAGCACAG 59.524 34.615 0.00 0.00 33.49 3.66
2081 2145 2.158769 ACAGCAGAAACTGGACATGACA 60.159 45.455 0.00 0.00 42.21 3.58
2175 2239 3.386486 TGTATCGCCGATTAATGTGTCC 58.614 45.455 4.31 0.00 0.00 4.02
2274 2338 7.176515 ACTTTCCTGAATAACATATGCACACAA 59.823 33.333 1.58 0.00 0.00 3.33
2316 2380 0.607489 CTGGTTCACTGCCTGAAGGG 60.607 60.000 0.00 0.00 39.69 3.95
2336 2400 2.295349 AGGCTTCAAAATGACTGCACAG 59.705 45.455 0.00 0.00 30.77 3.66
2469 2533 3.380320 AGTGTTGCTACCAAGGACAAAAC 59.620 43.478 0.00 0.33 31.66 2.43
2559 2623 3.857157 TTGGACACCTGTTTCTAGCTT 57.143 42.857 0.00 0.00 0.00 3.74
2637 2701 1.666189 GCCGCTGATAAAACCTCACTC 59.334 52.381 0.00 0.00 0.00 3.51
2657 2721 7.371159 TGCTATTCACTGGATTCGAACTATAG 58.629 38.462 0.00 0.00 0.00 1.31
2762 2826 2.206576 AGTCAGGATTCCCAAACTGC 57.793 50.000 0.00 0.00 31.01 4.40
2820 2884 5.422331 TGAGATAGAGGGAGTACAACTTTGG 59.578 44.000 0.00 0.00 0.00 3.28
2915 2979 7.519347 AGTTGGTTAATAAATACTCCCTCCA 57.481 36.000 0.00 0.00 0.00 3.86
3200 3264 9.938670 TGTACACACATTTGTAATAAAGTGAAC 57.061 29.630 0.00 0.00 33.73 3.18
3599 3664 8.642908 AAAGAAGCAATTTGTTACCAGTAAAC 57.357 30.769 0.00 0.00 0.00 2.01
3636 3701 8.183104 TGAGATTATTCAGGATATCGACAAGT 57.817 34.615 0.00 0.00 0.00 3.16
3853 3918 9.255304 GCATTAAAACCAACAGAAATCTAACAA 57.745 29.630 0.00 0.00 0.00 2.83
4044 4110 1.584483 GCCTGCATTGCACGAATCG 60.584 57.895 7.38 0.00 33.79 3.34
4137 4203 4.134379 TCATCATCACTTTCCAGCTCTC 57.866 45.455 0.00 0.00 0.00 3.20
4619 4685 6.754193 TCAAACACCAAGAGTTCAAACTTTT 58.246 32.000 0.00 0.00 39.88 2.27
4698 4764 3.053991 TGTTTGTTTGACTCCCTTCCTCA 60.054 43.478 0.00 0.00 0.00 3.86
4763 4829 4.488126 TGCCAGAAACAAGATTTCGAAG 57.512 40.909 0.00 0.00 33.86 3.79
4822 4888 2.035832 CCGGCAAAGTTTTGACCAATCT 59.964 45.455 8.70 0.00 43.30 2.40
4842 4908 9.124807 GAAAAACAAACATAGTTATAGCACACC 57.875 33.333 0.00 0.00 0.00 4.16
4845 4911 9.341899 CAGGAAAAACAAACATAGTTATAGCAC 57.658 33.333 0.00 0.00 0.00 4.40
4859 4925 2.100087 GGACGGCTTCAGGAAAAACAAA 59.900 45.455 0.00 0.00 0.00 2.83
4861 4927 1.314730 GGACGGCTTCAGGAAAAACA 58.685 50.000 0.00 0.00 0.00 2.83
4863 4929 0.179040 ACGGACGGCTTCAGGAAAAA 60.179 50.000 0.00 0.00 0.00 1.94
4962 5028 3.788227 ACCAAGAACACCTGCATAAGA 57.212 42.857 0.00 0.00 0.00 2.10
5164 5231 7.232118 AGAAAGTCGATGGAATTGGAAAATT 57.768 32.000 0.00 0.00 29.64 1.82
5176 5243 4.948847 TCACATATGGAGAAAGTCGATGG 58.051 43.478 7.80 0.00 0.00 3.51
5252 5319 9.847224 ACCTAATGTCGAGTCCATATTAAATTT 57.153 29.630 0.00 0.00 0.00 1.82
5333 5405 6.860080 AGAATCAACATTAGACATTGCAAGG 58.140 36.000 10.01 10.01 0.00 3.61
5349 5421 5.873179 TTGAACGGTGGATAAGAATCAAC 57.127 39.130 0.00 0.00 35.56 3.18
5364 5436 9.769093 CCTATACTCTTTTTAACAATTGAACGG 57.231 33.333 13.59 0.00 0.00 4.44
5468 5540 5.747197 ACCATAGTCGCTGAACTAATAAACG 59.253 40.000 0.00 0.00 35.47 3.60
5726 5798 6.319658 ACATAAAATGCTGTTACCAGATGAGG 59.680 38.462 0.00 0.00 41.50 3.86
5860 5932 4.638304 TGTTTTCTTCTACACCTACCAGC 58.362 43.478 0.00 0.00 0.00 4.85
5887 5959 7.972832 AATTCTTGTCGTGGACAGTAATTTA 57.027 32.000 11.44 0.00 43.69 1.40
6015 6087 2.088423 ACGTTTTGGTGAACAGCAGAA 58.912 42.857 6.78 6.37 40.18 3.02
6101 6174 0.817013 ACACACTTGTTTGCAGTGGG 59.183 50.000 3.89 3.89 42.19 4.61
6157 6230 4.709886 GGTAACTGAAAATATGCAGGGGTT 59.290 41.667 0.00 0.00 36.47 4.11
6492 6565 1.362932 ACTAAGCTTCCCTCTCCTCCA 59.637 52.381 0.00 0.00 0.00 3.86
6508 6581 2.100252 GGTACATGCTGCTCCGTACTAA 59.900 50.000 18.92 0.00 35.61 2.24
7089 7162 6.017523 CCTCTTCTTTTCAGTCAGAGAAAACC 60.018 42.308 0.00 0.00 39.34 3.27
7442 7626 7.735326 AACTTAGCTTCAAATAGAGTAGGGA 57.265 36.000 0.00 0.00 0.00 4.20
7496 7680 6.299805 ACTGGACAAAATAGAGCTGATACA 57.700 37.500 0.00 0.00 0.00 2.29
7662 7846 3.302870 GCTGCAGCACAACAATGAAAAAG 60.303 43.478 33.36 0.00 41.59 2.27
7848 8032 4.280174 AGAACAGTCTTAACCGCTTGAGTA 59.720 41.667 0.00 0.00 0.00 2.59
7914 8098 2.228582 TGGCGTGATGATTTTGTTCTGG 59.771 45.455 0.00 0.00 0.00 3.86
7953 8138 7.404671 AAACCAGTCACTGTTAACTGAAAAT 57.595 32.000 18.21 3.37 44.54 1.82
8128 8322 3.870419 TGTGAAGCCAACAAAGCAAATTC 59.130 39.130 0.00 0.00 0.00 2.17
8206 9240 3.876341 ACCAAGTGTGAGGTACGAAAAA 58.124 40.909 0.00 0.00 36.07 1.94
8229 9264 5.994887 AGTCTGTTACACGCAATACAAAA 57.005 34.783 0.00 0.00 0.00 2.44
8240 9275 2.729882 CCGCAACTGTAGTCTGTTACAC 59.270 50.000 0.00 0.00 34.76 2.90
8332 9367 7.335627 TGTAGACCATCGAAACCTAAATTCAT 58.664 34.615 0.00 0.00 0.00 2.57
8413 9449 8.028938 GTGACAAAATAACCTGCATTGAGTAAT 58.971 33.333 1.18 0.00 0.00 1.89
8456 9492 0.739561 GGAGAGCACGGTAGGTACTG 59.260 60.000 0.00 0.00 41.52 2.74
8538 9574 3.262405 ACCTGGCGTATAAGGAGTTCAAA 59.738 43.478 0.00 0.00 37.01 2.69
8539 9575 2.835764 ACCTGGCGTATAAGGAGTTCAA 59.164 45.455 0.00 0.00 37.01 2.69
8540 9576 2.167693 CACCTGGCGTATAAGGAGTTCA 59.832 50.000 0.00 0.00 37.01 3.18
8541 9577 2.822764 CACCTGGCGTATAAGGAGTTC 58.177 52.381 0.00 0.00 37.01 3.01
8542 9578 1.134491 GCACCTGGCGTATAAGGAGTT 60.134 52.381 0.00 0.00 37.01 3.01
8544 9580 3.290776 GCACCTGGCGTATAAGGAG 57.709 57.895 0.00 0.00 37.01 3.69
8555 9593 1.651240 CGATGGAAAGCTGCACCTGG 61.651 60.000 1.02 0.00 0.00 4.45
8574 9612 1.743394 GCTGTGTTAGGCAACCATACC 59.257 52.381 0.00 0.00 33.41 2.73
8593 9632 4.234530 AGAGCAACAGAAACAATGAAGC 57.765 40.909 0.00 0.00 0.00 3.86
8594 9633 5.051240 GCAAAGAGCAACAGAAACAATGAAG 60.051 40.000 0.00 0.00 44.79 3.02
8607 9646 2.639000 GCAACGCGCAAAGAGCAAC 61.639 57.895 5.73 0.00 46.13 4.17
8684 9723 0.913934 TAGGGTGCTTGATGCTGGGA 60.914 55.000 0.00 0.00 43.37 4.37
9053 10092 2.506231 TCAGGGTACACACAAGGAACAA 59.494 45.455 0.00 0.00 0.00 2.83
9109 10148 2.485122 GCAAAATGGGGAGCGTCG 59.515 61.111 0.00 0.00 0.00 5.12
9178 10217 4.264253 TGAGCCTTCACATACAATGGAAG 58.736 43.478 0.00 0.00 37.34 3.46
9212 10252 2.046313 GTGCACTTGCGACTTCAAATG 58.954 47.619 10.32 0.00 45.83 2.32
9253 10293 6.347321 CCAAATGTAAGCAAATTTTTCCGGAC 60.347 38.462 1.83 0.00 0.00 4.79
9257 10297 7.440856 TGAGTCCAAATGTAAGCAAATTTTTCC 59.559 33.333 0.00 0.00 0.00 3.13
9263 10303 6.996509 ACAATGAGTCCAAATGTAAGCAAAT 58.003 32.000 0.00 0.00 0.00 2.32
9264 10304 6.403866 ACAATGAGTCCAAATGTAAGCAAA 57.596 33.333 0.00 0.00 0.00 3.68
9265 10305 6.012658 GACAATGAGTCCAAATGTAAGCAA 57.987 37.500 0.00 0.00 41.56 3.91
9421 10651 8.409358 AAATGTTCTTATATTATGGGGCAGAC 57.591 34.615 0.00 0.00 0.00 3.51
9423 10653 9.696917 GAAAAATGTTCTTATATTATGGGGCAG 57.303 33.333 0.00 0.00 0.00 4.85
9424 10654 9.206690 TGAAAAATGTTCTTATATTATGGGGCA 57.793 29.630 0.00 0.00 0.00 5.36
9508 10738 5.898397 GGTTAAACTACTACTCCCTCCATCT 59.102 44.000 0.00 0.00 0.00 2.90
9561 10791 1.267121 TAGCACTGTCAGGTCCCTTC 58.733 55.000 4.53 0.00 0.00 3.46
9569 10801 4.669206 AGGATCAGATTAGCACTGTCAG 57.331 45.455 0.00 0.00 36.81 3.51
9578 10810 6.481313 TGAATTTCGCTCAAGGATCAGATTAG 59.519 38.462 0.00 0.00 0.00 1.73
9579 10811 6.258727 GTGAATTTCGCTCAAGGATCAGATTA 59.741 38.462 2.69 0.00 0.00 1.75
9614 10855 8.447833 CAGTAATCCGTGAATTAGCACTAAAAA 58.552 33.333 0.00 0.00 36.65 1.94
9615 10856 7.604927 ACAGTAATCCGTGAATTAGCACTAAAA 59.395 33.333 0.00 0.00 36.65 1.52
9616 10857 7.064134 CACAGTAATCCGTGAATTAGCACTAAA 59.936 37.037 0.00 0.00 36.65 1.85
9617 10858 6.533723 CACAGTAATCCGTGAATTAGCACTAA 59.466 38.462 0.00 0.00 36.65 2.24
9618 10859 6.040247 CACAGTAATCCGTGAATTAGCACTA 58.960 40.000 0.00 0.00 36.65 2.74
9619 10860 4.870426 CACAGTAATCCGTGAATTAGCACT 59.130 41.667 0.00 0.00 36.65 4.40
9620 10861 4.868171 TCACAGTAATCCGTGAATTAGCAC 59.132 41.667 0.00 0.00 39.14 4.40
9621 10862 4.868171 GTCACAGTAATCCGTGAATTAGCA 59.132 41.667 0.00 0.00 43.40 3.49
9622 10863 4.868171 TGTCACAGTAATCCGTGAATTAGC 59.132 41.667 0.00 0.00 43.40 3.09
9623 10864 5.004440 CGTGTCACAGTAATCCGTGAATTAG 59.996 44.000 3.42 0.00 43.40 1.73
9624 10865 4.860352 CGTGTCACAGTAATCCGTGAATTA 59.140 41.667 3.42 0.00 43.40 1.40
9625 10866 3.678072 CGTGTCACAGTAATCCGTGAATT 59.322 43.478 3.42 0.00 43.40 2.17
9626 10867 3.250744 CGTGTCACAGTAATCCGTGAAT 58.749 45.455 3.42 0.00 43.40 2.57
9627 10868 2.034939 ACGTGTCACAGTAATCCGTGAA 59.965 45.455 3.42 0.00 43.40 3.18
9702 10950 0.174845 CATGGAAGGTCGTCCGCTTA 59.825 55.000 0.00 0.00 40.96 3.09
9704 10952 2.579201 CATGGAAGGTCGTCCGCT 59.421 61.111 0.00 0.00 40.96 5.52
9706 10954 1.079127 AAGCATGGAAGGTCGTCCG 60.079 57.895 0.00 0.00 40.96 4.79
9707 10955 0.036388 TCAAGCATGGAAGGTCGTCC 60.036 55.000 0.00 0.00 38.27 4.79
9709 10957 1.523758 GTTCAAGCATGGAAGGTCGT 58.476 50.000 0.00 0.00 0.00 4.34
9711 10959 0.169009 GCGTTCAAGCATGGAAGGTC 59.831 55.000 0.00 0.00 37.05 3.85
9712 10960 0.537143 TGCGTTCAAGCATGGAAGGT 60.537 50.000 0.00 0.00 42.92 3.50
9713 10961 0.169672 CTGCGTTCAAGCATGGAAGG 59.830 55.000 0.00 0.00 46.97 3.46
9715 10963 0.537143 ACCTGCGTTCAAGCATGGAA 60.537 50.000 12.07 0.00 46.97 3.53
9716 10964 0.537143 AACCTGCGTTCAAGCATGGA 60.537 50.000 12.07 0.00 46.97 3.41
9717 10965 0.109597 GAACCTGCGTTCAAGCATGG 60.110 55.000 0.00 0.00 46.49 3.66
9718 10966 3.389741 GAACCTGCGTTCAAGCATG 57.610 52.632 0.19 0.00 46.49 4.06
9784 12679 2.015587 GGACCTCACCTCACTAGTACG 58.984 57.143 0.00 0.00 0.00 3.67
9785 12680 2.015587 CGGACCTCACCTCACTAGTAC 58.984 57.143 0.00 0.00 0.00 2.73
9787 12682 0.966370 GCGGACCTCACCTCACTAGT 60.966 60.000 0.00 0.00 0.00 2.57
9788 12683 0.681564 AGCGGACCTCACCTCACTAG 60.682 60.000 0.00 0.00 0.00 2.57
9789 12684 0.680280 GAGCGGACCTCACCTCACTA 60.680 60.000 0.00 0.00 40.45 2.74
9790 12685 1.979693 GAGCGGACCTCACCTCACT 60.980 63.158 0.00 0.00 40.45 3.41
9791 12686 2.276116 TGAGCGGACCTCACCTCAC 61.276 63.158 0.00 0.00 45.44 3.51
9792 12687 2.117423 TGAGCGGACCTCACCTCA 59.883 61.111 0.00 0.00 45.44 3.86
9840 12735 4.202367 ACTGTACCTCACTAGCTGCTTTTT 60.202 41.667 7.79 0.00 0.00 1.94
9841 12736 3.325135 ACTGTACCTCACTAGCTGCTTTT 59.675 43.478 7.79 0.00 0.00 2.27
9842 12737 2.900546 ACTGTACCTCACTAGCTGCTTT 59.099 45.455 7.79 0.00 0.00 3.51
9843 12738 2.530701 ACTGTACCTCACTAGCTGCTT 58.469 47.619 7.79 0.00 0.00 3.91
9844 12739 2.223803 ACTGTACCTCACTAGCTGCT 57.776 50.000 7.57 7.57 0.00 4.24
9845 12740 3.280295 TCTACTGTACCTCACTAGCTGC 58.720 50.000 0.00 0.00 0.00 5.25
9846 12741 4.700692 TGTTCTACTGTACCTCACTAGCTG 59.299 45.833 0.00 0.00 0.00 4.24
9847 12742 4.919793 TGTTCTACTGTACCTCACTAGCT 58.080 43.478 0.00 0.00 0.00 3.32
9848 12743 5.640189 TTGTTCTACTGTACCTCACTAGC 57.360 43.478 0.00 0.00 0.00 3.42
9851 12746 8.812972 TGATTATTTGTTCTACTGTACCTCACT 58.187 33.333 0.00 0.00 0.00 3.41
9852 12747 8.997621 TGATTATTTGTTCTACTGTACCTCAC 57.002 34.615 0.00 0.00 0.00 3.51
9862 12757 9.490663 CCGATTCACTTTGATTATTTGTTCTAC 57.509 33.333 0.00 0.00 0.00 2.59
9863 12758 9.443323 TCCGATTCACTTTGATTATTTGTTCTA 57.557 29.630 0.00 0.00 0.00 2.10
9864 12759 8.335532 TCCGATTCACTTTGATTATTTGTTCT 57.664 30.769 0.00 0.00 0.00 3.01
9865 12760 8.850452 GTTCCGATTCACTTTGATTATTTGTTC 58.150 33.333 0.00 0.00 0.00 3.18
9866 12761 8.356657 TGTTCCGATTCACTTTGATTATTTGTT 58.643 29.630 0.00 0.00 0.00 2.83
9867 12762 7.881142 TGTTCCGATTCACTTTGATTATTTGT 58.119 30.769 0.00 0.00 0.00 2.83
9868 12763 8.741101 TTGTTCCGATTCACTTTGATTATTTG 57.259 30.769 0.00 0.00 0.00 2.32
9869 12764 8.576442 ACTTGTTCCGATTCACTTTGATTATTT 58.424 29.630 0.00 0.00 0.00 1.40
9870 12765 8.110860 ACTTGTTCCGATTCACTTTGATTATT 57.889 30.769 0.00 0.00 0.00 1.40
9871 12766 7.687941 ACTTGTTCCGATTCACTTTGATTAT 57.312 32.000 0.00 0.00 0.00 1.28
9872 12767 7.118680 GGTACTTGTTCCGATTCACTTTGATTA 59.881 37.037 0.00 0.00 0.00 1.75
9873 12768 6.072673 GGTACTTGTTCCGATTCACTTTGATT 60.073 38.462 0.00 0.00 0.00 2.57
9874 12769 5.411669 GGTACTTGTTCCGATTCACTTTGAT 59.588 40.000 0.00 0.00 0.00 2.57
9875 12770 4.753107 GGTACTTGTTCCGATTCACTTTGA 59.247 41.667 0.00 0.00 0.00 2.69
9876 12771 4.513692 TGGTACTTGTTCCGATTCACTTTG 59.486 41.667 0.00 0.00 0.00 2.77
9877 12772 4.710324 TGGTACTTGTTCCGATTCACTTT 58.290 39.130 0.00 0.00 0.00 2.66
9878 12773 4.345859 TGGTACTTGTTCCGATTCACTT 57.654 40.909 0.00 0.00 0.00 3.16
9879 12774 4.062991 GTTGGTACTTGTTCCGATTCACT 58.937 43.478 0.00 0.00 0.00 3.41
9880 12775 3.810941 TGTTGGTACTTGTTCCGATTCAC 59.189 43.478 0.00 0.00 0.00 3.18
9881 12776 4.062293 CTGTTGGTACTTGTTCCGATTCA 58.938 43.478 0.00 0.00 0.00 2.57
9882 12777 3.435671 CCTGTTGGTACTTGTTCCGATTC 59.564 47.826 0.00 0.00 0.00 2.52
9883 12778 3.408634 CCTGTTGGTACTTGTTCCGATT 58.591 45.455 0.00 0.00 0.00 3.34
9884 12779 2.290071 CCCTGTTGGTACTTGTTCCGAT 60.290 50.000 0.00 0.00 0.00 4.18
9885 12780 1.071071 CCCTGTTGGTACTTGTTCCGA 59.929 52.381 0.00 0.00 0.00 4.55
9886 12781 1.519408 CCCTGTTGGTACTTGTTCCG 58.481 55.000 0.00 0.00 0.00 4.30
9897 12792 5.313712 AGTAGTTGTTTGATACCCTGTTGG 58.686 41.667 0.00 0.00 41.37 3.77
9898 12793 5.411669 GGAGTAGTTGTTTGATACCCTGTTG 59.588 44.000 0.00 0.00 0.00 3.33
9899 12794 5.514310 GGGAGTAGTTGTTTGATACCCTGTT 60.514 44.000 0.00 0.00 32.93 3.16
9900 12795 4.019591 GGGAGTAGTTGTTTGATACCCTGT 60.020 45.833 0.00 0.00 32.93 4.00
9901 12796 4.225267 AGGGAGTAGTTGTTTGATACCCTG 59.775 45.833 0.00 0.00 42.75 4.45
9902 12797 4.436079 AGGGAGTAGTTGTTTGATACCCT 58.564 43.478 0.00 0.00 40.07 4.34
9903 12798 4.470304 AGAGGGAGTAGTTGTTTGATACCC 59.530 45.833 0.00 0.00 35.53 3.69
9904 12799 5.046520 ACAGAGGGAGTAGTTGTTTGATACC 60.047 44.000 0.00 0.00 0.00 2.73
9905 12800 6.038997 ACAGAGGGAGTAGTTGTTTGATAC 57.961 41.667 0.00 0.00 0.00 2.24
9906 12801 7.786046 TTACAGAGGGAGTAGTTGTTTGATA 57.214 36.000 0.00 0.00 0.00 2.15
9907 12802 6.681729 TTACAGAGGGAGTAGTTGTTTGAT 57.318 37.500 0.00 0.00 0.00 2.57
9908 12803 6.099269 AGTTTACAGAGGGAGTAGTTGTTTGA 59.901 38.462 0.00 0.00 0.00 2.69
9909 12804 6.289064 AGTTTACAGAGGGAGTAGTTGTTTG 58.711 40.000 0.00 0.00 0.00 2.93
9910 12805 6.496144 AGTTTACAGAGGGAGTAGTTGTTT 57.504 37.500 0.00 0.00 0.00 2.83
9911 12806 7.607615 TTAGTTTACAGAGGGAGTAGTTGTT 57.392 36.000 0.00 0.00 0.00 2.83
9912 12807 7.793948 ATTAGTTTACAGAGGGAGTAGTTGT 57.206 36.000 0.00 0.00 0.00 3.32
9918 12813 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
9920 12815 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.