Multiple sequence alignment - TraesCS3A01G389000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G389000 chr3A 100.000 3367 0 0 1 3367 638017601 638014235 0.000000e+00 6218.0
1 TraesCS3A01G389000 chr3A 97.185 746 15 5 2625 3367 714285256 714285998 0.000000e+00 1256.0
2 TraesCS3A01G389000 chr3A 98.021 657 8 5 2714 3367 47074701 47075355 0.000000e+00 1136.0
3 TraesCS3A01G389000 chr3A 87.081 209 26 1 1 209 111839891 111840098 5.620000e-58 235.0
4 TraesCS3A01G389000 chr3A 92.063 63 4 1 2640 2702 26581146 26581207 1.660000e-13 87.9
5 TraesCS3A01G389000 chr3D 91.953 1802 93 29 689 2457 496768867 496767085 0.000000e+00 2477.0
6 TraesCS3A01G389000 chr3D 86.835 752 65 15 2642 3367 464255645 464254902 0.000000e+00 809.0
7 TraesCS3A01G389000 chr3D 86.916 749 58 11 2644 3367 559911249 559911982 0.000000e+00 804.0
8 TraesCS3A01G389000 chr3D 93.469 490 23 4 207 691 496769544 496769059 0.000000e+00 719.0
9 TraesCS3A01G389000 chr3D 94.444 180 8 1 2458 2637 603451551 603451728 3.310000e-70 276.0
10 TraesCS3A01G389000 chr3D 85.955 178 21 4 2458 2632 501330106 501329930 1.600000e-43 187.0
11 TraesCS3A01G389000 chr3B 92.595 1688 69 15 473 2113 656067508 656065830 0.000000e+00 2374.0
12 TraesCS3A01G389000 chr3B 83.311 737 78 19 2644 3367 693080278 693080982 3.660000e-179 638.0
13 TraesCS3A01G389000 chr3B 94.505 273 15 0 2148 2420 656065729 656065457 4.020000e-114 422.0
14 TraesCS3A01G389000 chr3B 94.309 123 3 2 207 327 656067626 656067506 5.740000e-43 185.0
15 TraesCS3A01G389000 chr7A 97.948 731 12 3 2638 3367 203016298 203017026 0.000000e+00 1264.0
16 TraesCS3A01G389000 chr7A 86.730 211 27 1 1 210 720003517 720003307 2.020000e-57 233.0
17 TraesCS3A01G389000 chr5B 86.453 1122 102 30 956 2044 661525094 661523990 0.000000e+00 1184.0
18 TraesCS3A01G389000 chr5B 84.378 1133 104 39 966 2041 661612007 661613123 0.000000e+00 1044.0
19 TraesCS3A01G389000 chr5A 85.956 1125 94 34 966 2041 653563246 653564355 0.000000e+00 1144.0
20 TraesCS3A01G389000 chr5A 87.694 967 87 16 1106 2044 653475327 653474365 0.000000e+00 1098.0
21 TraesCS3A01G389000 chr5A 84.507 213 31 2 1 212 563359990 563359779 3.400000e-50 209.0
22 TraesCS3A01G389000 chr5D 84.870 1117 115 30 969 2044 526411406 526410303 0.000000e+00 1077.0
23 TraesCS3A01G389000 chr5D 87.396 960 86 19 1113 2041 526432432 526433387 0.000000e+00 1070.0
24 TraesCS3A01G389000 chr5D 84.885 741 48 23 2644 3367 548527157 548527850 0.000000e+00 689.0
25 TraesCS3A01G389000 chr5D 89.498 438 34 4 1605 2030 526422496 526422933 8.220000e-151 544.0
26 TraesCS3A01G389000 chr6B 88.220 747 58 14 2643 3367 120677405 120678143 0.000000e+00 865.0
27 TraesCS3A01G389000 chr6B 86.702 188 21 4 2458 2643 79914530 79914715 4.400000e-49 206.0
28 TraesCS3A01G389000 chr6B 93.750 64 4 0 2644 2707 17388999 17388936 2.770000e-16 97.1
29 TraesCS3A01G389000 chr7B 86.800 750 64 16 2642 3367 145526480 145525742 0.000000e+00 804.0
30 TraesCS3A01G389000 chr7B 84.286 210 31 2 1 209 526714961 526714753 1.580000e-48 204.0
31 TraesCS3A01G389000 chr4A 86.747 747 54 18 2644 3367 2770578 2769854 0.000000e+00 789.0
32 TraesCS3A01G389000 chr4A 84.058 207 33 0 4 210 521058661 521058455 2.050000e-47 200.0
33 TraesCS3A01G389000 chr7D 86.547 669 54 17 2729 3367 169820476 169819814 0.000000e+00 704.0
34 TraesCS3A01G389000 chr6A 86.486 629 64 9 2755 3367 1273538 1274161 0.000000e+00 671.0
35 TraesCS3A01G389000 chr6A 83.886 211 32 2 1 210 572818731 572818940 2.050000e-47 200.0
36 TraesCS3A01G389000 chr2B 80.353 906 147 25 1138 2038 447825871 447824992 0.000000e+00 658.0
37 TraesCS3A01G389000 chr2B 89.873 158 16 0 2486 2643 663787624 663787467 1.580000e-48 204.0
38 TraesCS3A01G389000 chr1B 87.952 581 39 8 2644 3199 669069078 669068504 0.000000e+00 656.0
39 TraesCS3A01G389000 chr1B 85.238 210 27 4 1 209 250277798 250278004 2.630000e-51 213.0
40 TraesCS3A01G389000 chr1B 85.167 209 29 2 1 209 484457761 484457555 2.630000e-51 213.0
41 TraesCS3A01G389000 chr2D 79.912 906 151 25 1138 2038 376356683 376355804 1.320000e-178 636.0
42 TraesCS3A01G389000 chr2A 92.973 185 12 1 2459 2643 695992398 695992215 5.540000e-68 268.0
43 TraesCS3A01G389000 chr1D 83.981 206 32 1 7 212 424471390 424471186 2.650000e-46 196.0
44 TraesCS3A01G389000 chrUn 90.000 100 9 1 2640 2738 243812446 243812545 9.810000e-26 128.0
45 TraesCS3A01G389000 chrUn 90.000 100 9 1 2640 2738 365136500 365136599 9.810000e-26 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G389000 chr3A 638014235 638017601 3366 True 6218.000000 6218 100.000 1 3367 1 chr3A.!!$R1 3366
1 TraesCS3A01G389000 chr3A 714285256 714285998 742 False 1256.000000 1256 97.185 2625 3367 1 chr3A.!!$F4 742
2 TraesCS3A01G389000 chr3A 47074701 47075355 654 False 1136.000000 1136 98.021 2714 3367 1 chr3A.!!$F2 653
3 TraesCS3A01G389000 chr3D 496767085 496769544 2459 True 1598.000000 2477 92.711 207 2457 2 chr3D.!!$R3 2250
4 TraesCS3A01G389000 chr3D 464254902 464255645 743 True 809.000000 809 86.835 2642 3367 1 chr3D.!!$R1 725
5 TraesCS3A01G389000 chr3D 559911249 559911982 733 False 804.000000 804 86.916 2644 3367 1 chr3D.!!$F1 723
6 TraesCS3A01G389000 chr3B 656065457 656067626 2169 True 993.666667 2374 93.803 207 2420 3 chr3B.!!$R1 2213
7 TraesCS3A01G389000 chr3B 693080278 693080982 704 False 638.000000 638 83.311 2644 3367 1 chr3B.!!$F1 723
8 TraesCS3A01G389000 chr7A 203016298 203017026 728 False 1264.000000 1264 97.948 2638 3367 1 chr7A.!!$F1 729
9 TraesCS3A01G389000 chr5B 661523990 661525094 1104 True 1184.000000 1184 86.453 956 2044 1 chr5B.!!$R1 1088
10 TraesCS3A01G389000 chr5B 661612007 661613123 1116 False 1044.000000 1044 84.378 966 2041 1 chr5B.!!$F1 1075
11 TraesCS3A01G389000 chr5A 653563246 653564355 1109 False 1144.000000 1144 85.956 966 2041 1 chr5A.!!$F1 1075
12 TraesCS3A01G389000 chr5A 653474365 653475327 962 True 1098.000000 1098 87.694 1106 2044 1 chr5A.!!$R2 938
13 TraesCS3A01G389000 chr5D 526410303 526411406 1103 True 1077.000000 1077 84.870 969 2044 1 chr5D.!!$R1 1075
14 TraesCS3A01G389000 chr5D 526432432 526433387 955 False 1070.000000 1070 87.396 1113 2041 1 chr5D.!!$F2 928
15 TraesCS3A01G389000 chr5D 548527157 548527850 693 False 689.000000 689 84.885 2644 3367 1 chr5D.!!$F3 723
16 TraesCS3A01G389000 chr6B 120677405 120678143 738 False 865.000000 865 88.220 2643 3367 1 chr6B.!!$F2 724
17 TraesCS3A01G389000 chr7B 145525742 145526480 738 True 804.000000 804 86.800 2642 3367 1 chr7B.!!$R1 725
18 TraesCS3A01G389000 chr4A 2769854 2770578 724 True 789.000000 789 86.747 2644 3367 1 chr4A.!!$R1 723
19 TraesCS3A01G389000 chr7D 169819814 169820476 662 True 704.000000 704 86.547 2729 3367 1 chr7D.!!$R1 638
20 TraesCS3A01G389000 chr6A 1273538 1274161 623 False 671.000000 671 86.486 2755 3367 1 chr6A.!!$F1 612
21 TraesCS3A01G389000 chr2B 447824992 447825871 879 True 658.000000 658 80.353 1138 2038 1 chr2B.!!$R1 900
22 TraesCS3A01G389000 chr1B 669068504 669069078 574 True 656.000000 656 87.952 2644 3199 1 chr1B.!!$R2 555
23 TraesCS3A01G389000 chr2D 376355804 376356683 879 True 636.000000 636 79.912 1138 2038 1 chr2D.!!$R1 900

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.030101 GGAAGGAGATGCTCTCGTCG 59.970 60.0 8.25 0.0 44.28 5.12 F
112 113 0.036875 TGTCAGCTCAGTCTCTCGGA 59.963 55.0 0.00 0.0 0.00 4.55 F
197 198 0.036952 AGCGCTTGCATCTGTACTGT 60.037 50.0 2.64 0.0 42.66 3.55 F
198 199 0.095935 GCGCTTGCATCTGTACTGTG 59.904 55.0 0.00 0.0 38.92 3.66 F
380 383 0.105593 CCATCTCATCCGGACCACAG 59.894 60.0 6.12 0.0 0.00 3.66 F
761 977 0.317854 GCTGGCACCGACAAAAGAAC 60.318 55.0 0.00 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1586 1895 0.530211 CGATCCAGCTGAGCTCCAAG 60.530 60.000 17.39 3.74 36.40 3.61 R
1892 2213 0.970937 CCTCGTACCTCCTCTTGGCA 60.971 60.000 0.00 0.00 0.00 4.92 R
2140 2495 2.034001 CGAAGAGCAAAAACGTTCGTCT 60.034 45.455 0.00 0.00 36.21 4.18 R
2246 2632 8.480501 AGAATAAGCAAAAGAAATGCATGGTAT 58.519 29.630 0.00 0.00 46.22 2.73 R
2286 2673 2.429610 ACGACGTACAAATATCCAGCCT 59.570 45.455 0.00 0.00 0.00 4.58 R
2546 2933 0.104934 ACACTGAGAACCCTCCACCT 60.105 55.000 0.00 0.00 38.66 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.847818 TCAGGATTTTCGGCGATACG 58.152 50.000 11.76 0.00 0.00 3.06
21 22 1.135527 TCAGGATTTTCGGCGATACGT 59.864 47.619 11.76 0.00 34.94 3.57
22 23 1.931172 CAGGATTTTCGGCGATACGTT 59.069 47.619 11.76 0.00 34.94 3.99
23 24 2.350498 CAGGATTTTCGGCGATACGTTT 59.650 45.455 11.76 0.00 34.94 3.60
24 25 3.004862 AGGATTTTCGGCGATACGTTTT 58.995 40.909 11.76 0.00 34.94 2.43
25 26 3.063045 AGGATTTTCGGCGATACGTTTTC 59.937 43.478 11.76 1.32 34.94 2.29
26 27 3.181518 GGATTTTCGGCGATACGTTTTCA 60.182 43.478 11.76 0.00 34.94 2.69
27 28 3.443054 TTTTCGGCGATACGTTTTCAG 57.557 42.857 11.76 0.00 34.94 3.02
28 29 2.068837 TTCGGCGATACGTTTTCAGT 57.931 45.000 11.76 0.00 34.94 3.41
29 30 1.342555 TCGGCGATACGTTTTCAGTG 58.657 50.000 4.99 0.00 34.94 3.66
30 31 0.368907 CGGCGATACGTTTTCAGTGG 59.631 55.000 0.00 0.00 0.00 4.00
31 32 1.717194 GGCGATACGTTTTCAGTGGA 58.283 50.000 0.00 0.00 0.00 4.02
32 33 2.070783 GGCGATACGTTTTCAGTGGAA 58.929 47.619 0.00 0.00 0.00 3.53
33 34 2.093783 GGCGATACGTTTTCAGTGGAAG 59.906 50.000 0.00 0.00 33.82 3.46
34 35 2.093783 GCGATACGTTTTCAGTGGAAGG 59.906 50.000 0.00 0.00 33.82 3.46
35 36 3.581755 CGATACGTTTTCAGTGGAAGGA 58.418 45.455 0.00 0.00 33.82 3.36
36 37 3.612860 CGATACGTTTTCAGTGGAAGGAG 59.387 47.826 0.00 0.00 33.82 3.69
37 38 4.617530 CGATACGTTTTCAGTGGAAGGAGA 60.618 45.833 0.00 0.00 33.82 3.71
38 39 3.771577 ACGTTTTCAGTGGAAGGAGAT 57.228 42.857 0.00 0.00 33.82 2.75
39 40 3.403038 ACGTTTTCAGTGGAAGGAGATG 58.597 45.455 0.00 0.00 33.82 2.90
40 41 2.160417 CGTTTTCAGTGGAAGGAGATGC 59.840 50.000 0.00 0.00 33.82 3.91
41 42 3.416156 GTTTTCAGTGGAAGGAGATGCT 58.584 45.455 0.00 0.00 33.82 3.79
42 43 3.340814 TTTCAGTGGAAGGAGATGCTC 57.659 47.619 0.00 0.00 33.82 4.26
43 44 2.244486 TCAGTGGAAGGAGATGCTCT 57.756 50.000 0.00 0.00 0.00 4.09
44 45 2.106566 TCAGTGGAAGGAGATGCTCTC 58.893 52.381 5.01 5.01 42.66 3.20
45 46 1.110442 AGTGGAAGGAGATGCTCTCG 58.890 55.000 6.97 0.00 44.28 4.04
46 47 0.820871 GTGGAAGGAGATGCTCTCGT 59.179 55.000 6.97 5.25 44.28 4.18
47 48 1.107114 TGGAAGGAGATGCTCTCGTC 58.893 55.000 8.25 7.46 44.28 4.20
48 49 0.030101 GGAAGGAGATGCTCTCGTCG 59.970 60.000 8.25 0.00 44.28 5.12
49 50 1.018148 GAAGGAGATGCTCTCGTCGA 58.982 55.000 8.25 0.00 44.28 4.20
50 51 1.606668 GAAGGAGATGCTCTCGTCGAT 59.393 52.381 0.00 0.00 44.28 3.59
51 52 1.686355 AGGAGATGCTCTCGTCGATT 58.314 50.000 0.00 0.00 44.28 3.34
52 53 2.852449 AGGAGATGCTCTCGTCGATTA 58.148 47.619 0.00 0.00 44.28 1.75
53 54 2.550606 AGGAGATGCTCTCGTCGATTAC 59.449 50.000 0.00 0.00 44.28 1.89
66 67 2.797491 TCGATTACGAGACGTCTACGA 58.203 47.619 30.46 23.51 43.81 3.43
67 68 3.375642 TCGATTACGAGACGTCTACGAT 58.624 45.455 30.46 20.09 43.81 3.73
68 69 3.181178 TCGATTACGAGACGTCTACGATG 59.819 47.826 30.46 17.36 43.81 3.84
69 70 3.181178 CGATTACGAGACGTCTACGATGA 59.819 47.826 30.46 20.10 41.54 2.92
70 71 3.914555 TTACGAGACGTCTACGATGAC 57.085 47.619 30.46 14.03 41.54 3.06
71 72 2.007360 ACGAGACGTCTACGATGACT 57.993 50.000 30.46 14.30 43.02 3.41
72 73 2.344950 ACGAGACGTCTACGATGACTT 58.655 47.619 30.46 13.78 43.02 3.01
73 74 2.348059 ACGAGACGTCTACGATGACTTC 59.652 50.000 30.46 12.41 43.02 3.01
74 75 5.049786 ACGAGACGTCTACGATGACTTCG 62.050 52.174 30.46 22.48 45.08 3.79
87 88 6.871044 CGATGACTTCGTAAAATCTCAAGA 57.129 37.500 2.72 0.00 43.01 3.02
88 89 7.456684 CGATGACTTCGTAAAATCTCAAGAT 57.543 36.000 2.72 0.00 43.01 2.40
89 90 7.333269 CGATGACTTCGTAAAATCTCAAGATG 58.667 38.462 2.72 0.00 43.01 2.90
90 91 7.220875 CGATGACTTCGTAAAATCTCAAGATGA 59.779 37.037 2.72 0.00 43.01 2.92
91 92 8.954950 ATGACTTCGTAAAATCTCAAGATGAT 57.045 30.769 0.00 0.00 34.49 2.45
92 93 8.189709 TGACTTCGTAAAATCTCAAGATGATG 57.810 34.615 0.00 0.00 34.49 3.07
93 94 7.819415 TGACTTCGTAAAATCTCAAGATGATGT 59.181 33.333 0.00 0.00 34.49 3.06
94 95 7.968246 ACTTCGTAAAATCTCAAGATGATGTG 58.032 34.615 0.00 0.00 34.49 3.21
95 96 7.604164 ACTTCGTAAAATCTCAAGATGATGTGT 59.396 33.333 0.00 0.00 34.49 3.72
96 97 7.525688 TCGTAAAATCTCAAGATGATGTGTC 57.474 36.000 0.00 0.00 34.49 3.67
97 98 7.096551 TCGTAAAATCTCAAGATGATGTGTCA 58.903 34.615 0.00 0.00 39.04 3.58
98 99 7.276438 TCGTAAAATCTCAAGATGATGTGTCAG 59.724 37.037 0.00 0.00 37.87 3.51
99 100 5.814764 AAATCTCAAGATGATGTGTCAGC 57.185 39.130 0.00 0.00 41.02 4.26
106 107 3.523606 GATGATGTGTCAGCTCAGTCT 57.476 47.619 0.00 0.00 37.76 3.24
107 108 3.446799 GATGATGTGTCAGCTCAGTCTC 58.553 50.000 0.00 0.00 37.76 3.36
108 109 2.523245 TGATGTGTCAGCTCAGTCTCT 58.477 47.619 0.00 0.00 0.00 3.10
109 110 2.491298 TGATGTGTCAGCTCAGTCTCTC 59.509 50.000 0.00 0.00 0.00 3.20
110 111 0.877743 TGTGTCAGCTCAGTCTCTCG 59.122 55.000 0.00 0.00 0.00 4.04
111 112 0.170116 GTGTCAGCTCAGTCTCTCGG 59.830 60.000 0.00 0.00 0.00 4.63
112 113 0.036875 TGTCAGCTCAGTCTCTCGGA 59.963 55.000 0.00 0.00 0.00 4.55
113 114 0.732571 GTCAGCTCAGTCTCTCGGAG 59.267 60.000 0.00 0.00 40.44 4.63
114 115 0.615850 TCAGCTCAGTCTCTCGGAGA 59.384 55.000 7.60 7.60 40.01 3.71
115 116 1.211703 TCAGCTCAGTCTCTCGGAGAT 59.788 52.381 8.39 0.00 40.98 2.75
116 117 1.334556 CAGCTCAGTCTCTCGGAGATG 59.665 57.143 8.39 4.48 44.80 2.90
117 118 1.064758 AGCTCAGTCTCTCGGAGATGT 60.065 52.381 8.39 0.00 40.98 3.06
118 119 1.748493 GCTCAGTCTCTCGGAGATGTT 59.252 52.381 8.39 0.00 40.98 2.71
119 120 2.223479 GCTCAGTCTCTCGGAGATGTTC 60.223 54.545 8.39 0.17 40.98 3.18
120 121 3.013219 CTCAGTCTCTCGGAGATGTTCA 58.987 50.000 8.39 0.00 40.98 3.18
121 122 3.625853 TCAGTCTCTCGGAGATGTTCAT 58.374 45.455 8.39 0.00 40.98 2.57
122 123 4.781934 TCAGTCTCTCGGAGATGTTCATA 58.218 43.478 8.39 0.00 40.98 2.15
123 124 5.193679 TCAGTCTCTCGGAGATGTTCATAA 58.806 41.667 8.39 0.00 40.98 1.90
124 125 5.298026 TCAGTCTCTCGGAGATGTTCATAAG 59.702 44.000 8.39 0.00 40.98 1.73
125 126 5.298026 CAGTCTCTCGGAGATGTTCATAAGA 59.702 44.000 8.39 0.00 40.98 2.10
126 127 5.530915 AGTCTCTCGGAGATGTTCATAAGAG 59.469 44.000 8.39 0.00 40.98 2.85
127 128 5.298276 GTCTCTCGGAGATGTTCATAAGAGT 59.702 44.000 8.39 0.00 40.98 3.24
128 129 6.483974 GTCTCTCGGAGATGTTCATAAGAGTA 59.516 42.308 8.39 0.00 40.98 2.59
129 130 7.012515 GTCTCTCGGAGATGTTCATAAGAGTAA 59.987 40.741 8.39 0.00 40.98 2.24
130 131 7.227711 TCTCTCGGAGATGTTCATAAGAGTAAG 59.772 40.741 8.39 0.00 33.35 2.34
131 132 7.054751 TCTCGGAGATGTTCATAAGAGTAAGA 58.945 38.462 2.97 0.00 33.89 2.10
132 133 7.721842 TCTCGGAGATGTTCATAAGAGTAAGAT 59.278 37.037 2.97 0.00 33.89 2.40
133 134 7.652727 TCGGAGATGTTCATAAGAGTAAGATG 58.347 38.462 0.00 0.00 0.00 2.90
134 135 7.285629 TCGGAGATGTTCATAAGAGTAAGATGT 59.714 37.037 0.00 0.00 0.00 3.06
135 136 7.380870 CGGAGATGTTCATAAGAGTAAGATGTG 59.619 40.741 0.00 0.00 0.00 3.21
136 137 7.170658 GGAGATGTTCATAAGAGTAAGATGTGC 59.829 40.741 0.00 0.00 0.00 4.57
137 138 6.699204 AGATGTTCATAAGAGTAAGATGTGCG 59.301 38.462 0.00 0.00 0.00 5.34
138 139 5.720202 TGTTCATAAGAGTAAGATGTGCGT 58.280 37.500 0.00 0.00 0.00 5.24
139 140 5.576774 TGTTCATAAGAGTAAGATGTGCGTG 59.423 40.000 0.00 0.00 0.00 5.34
140 141 5.324784 TCATAAGAGTAAGATGTGCGTGT 57.675 39.130 0.00 0.00 0.00 4.49
141 142 5.102313 TCATAAGAGTAAGATGTGCGTGTG 58.898 41.667 0.00 0.00 0.00 3.82
142 143 3.386768 AAGAGTAAGATGTGCGTGTGT 57.613 42.857 0.00 0.00 0.00 3.72
143 144 2.677199 AGAGTAAGATGTGCGTGTGTG 58.323 47.619 0.00 0.00 0.00 3.82
144 145 1.126846 GAGTAAGATGTGCGTGTGTGC 59.873 52.381 0.00 0.00 0.00 4.57
145 146 0.179250 GTAAGATGTGCGTGTGTGCG 60.179 55.000 0.00 0.00 37.81 5.34
146 147 0.598942 TAAGATGTGCGTGTGTGCGT 60.599 50.000 0.00 0.00 37.81 5.24
147 148 1.436195 AAGATGTGCGTGTGTGCGTT 61.436 50.000 0.00 0.00 37.81 4.84
148 149 1.010125 GATGTGCGTGTGTGCGTTT 60.010 52.632 0.00 0.00 37.81 3.60
149 150 0.233590 GATGTGCGTGTGTGCGTTTA 59.766 50.000 0.00 0.00 37.81 2.01
150 151 0.871722 ATGTGCGTGTGTGCGTTTAT 59.128 45.000 0.00 0.00 37.81 1.40
151 152 1.499049 TGTGCGTGTGTGCGTTTATA 58.501 45.000 0.00 0.00 37.81 0.98
152 153 1.457683 TGTGCGTGTGTGCGTTTATAG 59.542 47.619 0.00 0.00 37.81 1.31
153 154 1.072391 TGCGTGTGTGCGTTTATAGG 58.928 50.000 0.00 0.00 37.81 2.57
154 155 1.336980 TGCGTGTGTGCGTTTATAGGA 60.337 47.619 0.00 0.00 37.81 2.94
155 156 1.727880 GCGTGTGTGCGTTTATAGGAA 59.272 47.619 0.00 0.00 0.00 3.36
156 157 2.350498 GCGTGTGTGCGTTTATAGGAAT 59.650 45.455 0.00 0.00 0.00 3.01
157 158 3.552699 GCGTGTGTGCGTTTATAGGAATA 59.447 43.478 0.00 0.00 0.00 1.75
158 159 4.033129 GCGTGTGTGCGTTTATAGGAATAA 59.967 41.667 0.00 0.00 0.00 1.40
159 160 5.724239 CGTGTGTGCGTTTATAGGAATAAG 58.276 41.667 0.00 0.00 0.00 1.73
160 161 5.290158 CGTGTGTGCGTTTATAGGAATAAGT 59.710 40.000 0.00 0.00 0.00 2.24
161 162 6.475207 GTGTGTGCGTTTATAGGAATAAGTG 58.525 40.000 0.00 0.00 0.00 3.16
162 163 6.091713 GTGTGTGCGTTTATAGGAATAAGTGT 59.908 38.462 0.00 0.00 0.00 3.55
163 164 7.276218 GTGTGTGCGTTTATAGGAATAAGTGTA 59.724 37.037 0.00 0.00 0.00 2.90
164 165 7.982919 TGTGTGCGTTTATAGGAATAAGTGTAT 59.017 33.333 0.00 0.00 0.00 2.29
165 166 8.273557 GTGTGCGTTTATAGGAATAAGTGTATG 58.726 37.037 0.00 0.00 0.00 2.39
166 167 7.042321 TGTGCGTTTATAGGAATAAGTGTATGC 60.042 37.037 0.00 0.00 0.00 3.14
167 168 6.144886 TGCGTTTATAGGAATAAGTGTATGCG 59.855 38.462 0.00 0.00 0.00 4.73
168 169 6.522761 CGTTTATAGGAATAAGTGTATGCGC 58.477 40.000 0.00 0.00 0.00 6.09
169 170 6.522761 GTTTATAGGAATAAGTGTATGCGCG 58.477 40.000 0.00 0.00 0.00 6.86
170 171 2.596904 AGGAATAAGTGTATGCGCGT 57.403 45.000 8.43 7.55 0.00 6.01
171 172 2.901249 AGGAATAAGTGTATGCGCGTT 58.099 42.857 7.78 0.00 0.00 4.84
172 173 3.267483 AGGAATAAGTGTATGCGCGTTT 58.733 40.909 7.78 0.00 0.00 3.60
173 174 4.435425 AGGAATAAGTGTATGCGCGTTTA 58.565 39.130 7.78 0.00 0.00 2.01
174 175 5.054477 AGGAATAAGTGTATGCGCGTTTAT 58.946 37.500 7.78 2.68 0.00 1.40
175 176 6.218019 AGGAATAAGTGTATGCGCGTTTATA 58.782 36.000 7.78 1.67 0.00 0.98
176 177 6.145048 AGGAATAAGTGTATGCGCGTTTATAC 59.855 38.462 7.78 14.51 0.00 1.47
189 190 2.892613 GTTTATACGAGCGCTTGCATC 58.107 47.619 24.80 3.80 42.66 3.91
190 191 2.509052 TTATACGAGCGCTTGCATCT 57.491 45.000 24.80 7.66 42.66 2.90
191 192 1.770957 TATACGAGCGCTTGCATCTG 58.229 50.000 24.80 5.09 42.66 2.90
192 193 0.179100 ATACGAGCGCTTGCATCTGT 60.179 50.000 24.80 6.50 42.66 3.41
193 194 0.454196 TACGAGCGCTTGCATCTGTA 59.546 50.000 24.80 5.44 42.66 2.74
194 195 1.078759 ACGAGCGCTTGCATCTGTAC 61.079 55.000 24.80 0.00 42.66 2.90
195 196 0.803768 CGAGCGCTTGCATCTGTACT 60.804 55.000 13.26 0.00 42.66 2.73
196 197 0.649475 GAGCGCTTGCATCTGTACTG 59.351 55.000 13.26 0.00 42.66 2.74
197 198 0.036952 AGCGCTTGCATCTGTACTGT 60.037 50.000 2.64 0.00 42.66 3.55
198 199 0.095935 GCGCTTGCATCTGTACTGTG 59.904 55.000 0.00 0.00 38.92 3.66
199 200 1.432514 CGCTTGCATCTGTACTGTGT 58.567 50.000 0.00 0.00 0.00 3.72
200 201 1.800586 CGCTTGCATCTGTACTGTGTT 59.199 47.619 0.00 0.00 0.00 3.32
201 202 2.993220 CGCTTGCATCTGTACTGTGTTA 59.007 45.455 0.00 0.00 0.00 2.41
202 203 3.431912 CGCTTGCATCTGTACTGTGTTAA 59.568 43.478 0.00 0.00 0.00 2.01
203 204 4.084066 CGCTTGCATCTGTACTGTGTTAAA 60.084 41.667 0.00 0.00 0.00 1.52
204 205 5.559991 CGCTTGCATCTGTACTGTGTTAAAA 60.560 40.000 0.00 0.00 0.00 1.52
205 206 5.853282 GCTTGCATCTGTACTGTGTTAAAAG 59.147 40.000 0.00 0.00 0.00 2.27
250 253 6.204882 ACTTAAAAGAAGAATTGTCACGGAGG 59.795 38.462 0.00 0.00 0.00 4.30
329 332 1.180029 GCCAATGCTTCACAGACCAT 58.820 50.000 0.00 0.00 33.53 3.55
340 343 3.138304 TCACAGACCATACACACAAAGC 58.862 45.455 0.00 0.00 0.00 3.51
372 375 2.031516 GCGCCATCCATCTCATCCG 61.032 63.158 0.00 0.00 0.00 4.18
373 376 1.375140 CGCCATCCATCTCATCCGG 60.375 63.158 0.00 0.00 0.00 5.14
380 383 0.105593 CCATCTCATCCGGACCACAG 59.894 60.000 6.12 0.00 0.00 3.66
393 396 4.323257 CCGGACCACAGAACTTAACCTAAT 60.323 45.833 0.00 0.00 0.00 1.73
550 556 6.264832 CAGCATGCAATATTTTAGTCGGAAA 58.735 36.000 21.98 0.00 0.00 3.13
551 557 6.751425 CAGCATGCAATATTTTAGTCGGAAAA 59.249 34.615 21.98 0.00 33.04 2.29
623 629 0.610232 AGGCCAGAATCCACAGCAAC 60.610 55.000 5.01 0.00 0.00 4.17
758 974 1.856265 GAGGCTGGCACCGACAAAAG 61.856 60.000 3.38 0.00 33.69 2.27
759 975 1.896660 GGCTGGCACCGACAAAAGA 60.897 57.895 0.00 0.00 0.00 2.52
760 976 1.452145 GGCTGGCACCGACAAAAGAA 61.452 55.000 0.00 0.00 0.00 2.52
761 977 0.317854 GCTGGCACCGACAAAAGAAC 60.318 55.000 0.00 0.00 0.00 3.01
762 978 1.308998 CTGGCACCGACAAAAGAACT 58.691 50.000 0.00 0.00 0.00 3.01
765 981 1.264288 GGCACCGACAAAAGAACTCTG 59.736 52.381 0.00 0.00 0.00 3.35
868 1099 4.452733 CGTCTCTCCCGTTGGCCC 62.453 72.222 0.00 0.00 0.00 5.80
984 1216 3.131240 GGCACGCCTATAAACAAACAG 57.869 47.619 0.00 0.00 0.00 3.16
988 1220 3.007635 ACGCCTATAAACAAACAGCTCC 58.992 45.455 0.00 0.00 0.00 4.70
998 1231 0.957395 AAACAGCTCCTGGTCGCATG 60.957 55.000 11.93 9.58 35.51 4.06
1081 1350 1.641577 GCTTACTCCGGCTTGTAGTG 58.358 55.000 0.00 0.00 0.00 2.74
1586 1895 1.424635 CTCGTTCTCTCCGTCGGAC 59.575 63.158 10.71 0.00 0.00 4.79
1892 2213 1.629464 GGGGAGAAGGAAAGGGAGGAT 60.629 57.143 0.00 0.00 0.00 3.24
2246 2632 8.458573 ACACAAGTTGGTAGATTGTTTATTCA 57.541 30.769 7.96 0.00 35.04 2.57
2259 2645 9.754382 AGATTGTTTATTCATACCATGCATTTC 57.246 29.630 0.00 0.00 0.00 2.17
2265 2651 6.913873 ATTCATACCATGCATTTCTTTTGC 57.086 33.333 0.00 0.00 40.55 3.68
2303 2690 4.322080 TCAGAGGCTGGATATTTGTACG 57.678 45.455 0.00 0.00 31.51 3.67
2331 2718 5.910166 TGAAACATGTACAATCGTTTTTCCG 59.090 36.000 17.39 0.00 31.98 4.30
2358 2745 3.644884 ATCGGCTGTAATAACCTCTCG 57.355 47.619 0.00 0.00 0.00 4.04
2395 2782 5.880887 GGGACGAAGGAAGTATGAGAAAAAT 59.119 40.000 0.00 0.00 0.00 1.82
2436 2823 9.262472 CTACTAGCACTAAAATTACTTTTTGCG 57.738 33.333 8.46 0.00 40.54 4.85
2437 2824 7.867752 ACTAGCACTAAAATTACTTTTTGCGA 58.132 30.769 8.46 4.44 40.54 5.10
2438 2825 8.347035 ACTAGCACTAAAATTACTTTTTGCGAA 58.653 29.630 8.46 0.00 40.54 4.70
2440 2827 7.200455 AGCACTAAAATTACTTTTTGCGAACT 58.800 30.769 8.46 0.00 40.54 3.01
2441 2828 8.347035 AGCACTAAAATTACTTTTTGCGAACTA 58.653 29.630 8.46 0.00 40.54 2.24
2442 2829 8.960075 GCACTAAAATTACTTTTTGCGAACTAA 58.040 29.630 0.00 0.00 38.03 2.24
2453 2840 8.995220 ACTTTTTGCGAACTAATATGTAGTTGA 58.005 29.630 12.24 0.00 37.83 3.18
2454 2841 9.820229 CTTTTTGCGAACTAATATGTAGTTGAA 57.180 29.630 12.24 3.96 37.83 2.69
2456 2843 9.767684 TTTTGCGAACTAATATGTAGTTGAATG 57.232 29.630 12.24 4.65 37.83 2.67
2457 2844 7.477144 TGCGAACTAATATGTAGTTGAATGG 57.523 36.000 12.24 2.73 37.83 3.16
2458 2845 6.481976 TGCGAACTAATATGTAGTTGAATGGG 59.518 38.462 12.24 0.00 37.83 4.00
2459 2846 6.073222 GCGAACTAATATGTAGTTGAATGGGG 60.073 42.308 12.24 0.00 37.83 4.96
2460 2847 7.214381 CGAACTAATATGTAGTTGAATGGGGA 58.786 38.462 12.24 0.00 37.83 4.81
2461 2848 7.385205 CGAACTAATATGTAGTTGAATGGGGAG 59.615 40.741 12.24 0.00 37.83 4.30
2462 2849 6.534634 ACTAATATGTAGTTGAATGGGGAGC 58.465 40.000 0.00 0.00 0.00 4.70
2463 2850 5.387113 AATATGTAGTTGAATGGGGAGCA 57.613 39.130 0.00 0.00 0.00 4.26
2464 2851 3.737559 ATGTAGTTGAATGGGGAGCAA 57.262 42.857 0.00 0.00 0.00 3.91
2465 2852 2.790433 TGTAGTTGAATGGGGAGCAAC 58.210 47.619 0.00 0.00 41.53 4.17
2470 2857 4.864704 GTTGAATGGGGAGCAACTAAAA 57.135 40.909 0.00 0.00 38.96 1.52
2471 2858 5.405935 GTTGAATGGGGAGCAACTAAAAT 57.594 39.130 0.00 0.00 38.96 1.82
2472 2859 6.524101 GTTGAATGGGGAGCAACTAAAATA 57.476 37.500 0.00 0.00 38.96 1.40
2473 2860 6.564328 GTTGAATGGGGAGCAACTAAAATAG 58.436 40.000 0.00 0.00 38.96 1.73
2474 2861 6.073447 TGAATGGGGAGCAACTAAAATAGA 57.927 37.500 0.00 0.00 0.00 1.98
2475 2862 6.489603 TGAATGGGGAGCAACTAAAATAGAA 58.510 36.000 0.00 0.00 0.00 2.10
2476 2863 6.603201 TGAATGGGGAGCAACTAAAATAGAAG 59.397 38.462 0.00 0.00 0.00 2.85
2477 2864 5.772393 TGGGGAGCAACTAAAATAGAAGA 57.228 39.130 0.00 0.00 0.00 2.87
2478 2865 6.134535 TGGGGAGCAACTAAAATAGAAGAA 57.865 37.500 0.00 0.00 0.00 2.52
2479 2866 6.180472 TGGGGAGCAACTAAAATAGAAGAAG 58.820 40.000 0.00 0.00 0.00 2.85
2480 2867 5.590663 GGGGAGCAACTAAAATAGAAGAAGG 59.409 44.000 0.00 0.00 0.00 3.46
2481 2868 5.590663 GGGAGCAACTAAAATAGAAGAAGGG 59.409 44.000 0.00 0.00 0.00 3.95
2482 2869 5.066634 GGAGCAACTAAAATAGAAGAAGGGC 59.933 44.000 0.00 0.00 0.00 5.19
2483 2870 4.950475 AGCAACTAAAATAGAAGAAGGGCC 59.050 41.667 0.00 0.00 0.00 5.80
2484 2871 4.950475 GCAACTAAAATAGAAGAAGGGCCT 59.050 41.667 0.00 0.00 0.00 5.19
2485 2872 6.069615 AGCAACTAAAATAGAAGAAGGGCCTA 60.070 38.462 6.41 0.00 0.00 3.93
2486 2873 6.261158 GCAACTAAAATAGAAGAAGGGCCTAG 59.739 42.308 6.41 0.00 0.00 3.02
2487 2874 6.502074 ACTAAAATAGAAGAAGGGCCTAGG 57.498 41.667 6.41 3.67 0.00 3.02
2488 2875 6.210522 ACTAAAATAGAAGAAGGGCCTAGGA 58.789 40.000 14.75 0.00 0.00 2.94
2489 2876 6.852372 ACTAAAATAGAAGAAGGGCCTAGGAT 59.148 38.462 14.75 0.00 0.00 3.24
2490 2877 5.574970 AAATAGAAGAAGGGCCTAGGATG 57.425 43.478 14.75 0.00 0.00 3.51
2491 2878 2.877154 AGAAGAAGGGCCTAGGATGA 57.123 50.000 14.75 0.00 0.00 2.92
2492 2879 3.136641 AGAAGAAGGGCCTAGGATGAA 57.863 47.619 14.75 0.00 0.00 2.57
2493 2880 3.464828 AGAAGAAGGGCCTAGGATGAAA 58.535 45.455 14.75 0.00 0.00 2.69
2494 2881 3.457749 AGAAGAAGGGCCTAGGATGAAAG 59.542 47.826 14.75 0.00 0.00 2.62
2495 2882 3.136641 AGAAGGGCCTAGGATGAAAGA 57.863 47.619 14.75 0.00 0.00 2.52
2496 2883 3.464828 AGAAGGGCCTAGGATGAAAGAA 58.535 45.455 14.75 0.00 0.00 2.52
2497 2884 4.050757 AGAAGGGCCTAGGATGAAAGAAT 58.949 43.478 14.75 0.00 0.00 2.40
2498 2885 5.227593 AGAAGGGCCTAGGATGAAAGAATA 58.772 41.667 14.75 0.00 0.00 1.75
2499 2886 5.309282 AGAAGGGCCTAGGATGAAAGAATAG 59.691 44.000 14.75 0.00 0.00 1.73
2500 2887 4.832492 AGGGCCTAGGATGAAAGAATAGA 58.168 43.478 14.75 0.00 0.00 1.98
2501 2888 5.227593 AGGGCCTAGGATGAAAGAATAGAA 58.772 41.667 14.75 0.00 0.00 2.10
2502 2889 5.672194 AGGGCCTAGGATGAAAGAATAGAAA 59.328 40.000 14.75 0.00 0.00 2.52
2503 2890 6.160459 AGGGCCTAGGATGAAAGAATAGAAAA 59.840 38.462 14.75 0.00 0.00 2.29
2504 2891 6.833933 GGGCCTAGGATGAAAGAATAGAAAAA 59.166 38.462 14.75 0.00 0.00 1.94
2505 2892 7.507277 GGGCCTAGGATGAAAGAATAGAAAAAT 59.493 37.037 14.75 0.00 0.00 1.82
2506 2893 8.355913 GGCCTAGGATGAAAGAATAGAAAAATG 58.644 37.037 14.75 0.00 0.00 2.32
2507 2894 9.125026 GCCTAGGATGAAAGAATAGAAAAATGA 57.875 33.333 14.75 0.00 0.00 2.57
2515 2902 9.590451 TGAAAGAATAGAAAAATGAATCATGGC 57.410 29.630 0.00 0.00 0.00 4.40
2516 2903 8.953368 AAAGAATAGAAAAATGAATCATGGCC 57.047 30.769 0.00 0.00 0.00 5.36
2517 2904 6.742109 AGAATAGAAAAATGAATCATGGCCG 58.258 36.000 0.00 0.00 0.00 6.13
2518 2905 6.322201 AGAATAGAAAAATGAATCATGGCCGT 59.678 34.615 0.00 0.00 0.00 5.68
2519 2906 4.806640 AGAAAAATGAATCATGGCCGTT 57.193 36.364 0.00 0.00 0.00 4.44
2520 2907 4.497300 AGAAAAATGAATCATGGCCGTTG 58.503 39.130 0.00 0.00 0.00 4.10
2521 2908 2.965572 AAATGAATCATGGCCGTTGG 57.034 45.000 0.00 0.00 0.00 3.77
2522 2909 2.142356 AATGAATCATGGCCGTTGGA 57.858 45.000 0.00 0.00 0.00 3.53
2523 2910 2.369983 ATGAATCATGGCCGTTGGAT 57.630 45.000 0.00 0.00 0.00 3.41
2524 2911 1.391577 TGAATCATGGCCGTTGGATG 58.608 50.000 0.00 0.00 0.00 3.51
2525 2912 0.670162 GAATCATGGCCGTTGGATGG 59.330 55.000 0.00 0.00 0.00 3.51
2526 2913 0.258484 AATCATGGCCGTTGGATGGA 59.742 50.000 0.00 0.00 0.00 3.41
2527 2914 0.258484 ATCATGGCCGTTGGATGGAA 59.742 50.000 0.00 0.00 0.00 3.53
2528 2915 0.394216 TCATGGCCGTTGGATGGAAG 60.394 55.000 0.00 0.00 0.00 3.46
2529 2916 0.394216 CATGGCCGTTGGATGGAAGA 60.394 55.000 0.00 0.00 0.00 2.87
2530 2917 0.552848 ATGGCCGTTGGATGGAAGAT 59.447 50.000 0.00 0.00 0.00 2.40
2531 2918 0.394216 TGGCCGTTGGATGGAAGATG 60.394 55.000 0.00 0.00 0.00 2.90
2532 2919 0.107214 GGCCGTTGGATGGAAGATGA 60.107 55.000 0.00 0.00 0.00 2.92
2533 2920 1.017387 GCCGTTGGATGGAAGATGAC 58.983 55.000 0.00 0.00 0.00 3.06
2534 2921 1.668419 CCGTTGGATGGAAGATGACC 58.332 55.000 0.00 0.00 0.00 4.02
2535 2922 1.290203 CGTTGGATGGAAGATGACCG 58.710 55.000 0.00 0.00 0.00 4.79
2536 2923 1.668419 GTTGGATGGAAGATGACCGG 58.332 55.000 0.00 0.00 0.00 5.28
2537 2924 1.065418 GTTGGATGGAAGATGACCGGT 60.065 52.381 6.92 6.92 0.00 5.28
2538 2925 2.168458 TGGATGGAAGATGACCGGTA 57.832 50.000 7.34 0.00 0.00 4.02
2539 2926 1.760613 TGGATGGAAGATGACCGGTAC 59.239 52.381 7.34 1.84 0.00 3.34
2540 2927 1.760613 GGATGGAAGATGACCGGTACA 59.239 52.381 7.34 8.29 0.00 2.90
2541 2928 2.224066 GGATGGAAGATGACCGGTACAG 60.224 54.545 7.34 0.00 0.00 2.74
2542 2929 2.225382 TGGAAGATGACCGGTACAGA 57.775 50.000 7.34 0.00 0.00 3.41
2543 2930 2.747177 TGGAAGATGACCGGTACAGAT 58.253 47.619 7.34 0.00 0.00 2.90
2544 2931 3.104512 TGGAAGATGACCGGTACAGATT 58.895 45.455 7.34 6.65 0.00 2.40
2545 2932 3.118775 TGGAAGATGACCGGTACAGATTG 60.119 47.826 7.34 0.00 0.00 2.67
2546 2933 3.132289 GGAAGATGACCGGTACAGATTGA 59.868 47.826 7.34 0.00 0.00 2.57
2547 2934 4.363999 GAAGATGACCGGTACAGATTGAG 58.636 47.826 7.34 0.00 0.00 3.02
2548 2935 2.695666 AGATGACCGGTACAGATTGAGG 59.304 50.000 7.34 0.00 0.00 3.86
2549 2936 1.933021 TGACCGGTACAGATTGAGGT 58.067 50.000 7.34 0.00 34.27 3.85
2550 2937 1.548719 TGACCGGTACAGATTGAGGTG 59.451 52.381 7.34 0.00 31.35 4.00
2551 2938 0.902531 ACCGGTACAGATTGAGGTGG 59.097 55.000 4.49 0.00 0.00 4.61
2552 2939 1.191535 CCGGTACAGATTGAGGTGGA 58.808 55.000 0.00 0.00 0.00 4.02
2553 2940 1.137086 CCGGTACAGATTGAGGTGGAG 59.863 57.143 0.00 0.00 0.00 3.86
2554 2941 1.137086 CGGTACAGATTGAGGTGGAGG 59.863 57.143 0.00 0.00 0.00 4.30
2555 2942 1.486726 GGTACAGATTGAGGTGGAGGG 59.513 57.143 0.00 0.00 0.00 4.30
2556 2943 2.188817 GTACAGATTGAGGTGGAGGGT 58.811 52.381 0.00 0.00 0.00 4.34
2557 2944 1.747444 ACAGATTGAGGTGGAGGGTT 58.253 50.000 0.00 0.00 0.00 4.11
2558 2945 1.630878 ACAGATTGAGGTGGAGGGTTC 59.369 52.381 0.00 0.00 0.00 3.62
2559 2946 1.912043 CAGATTGAGGTGGAGGGTTCT 59.088 52.381 0.00 0.00 0.00 3.01
2560 2947 2.093235 CAGATTGAGGTGGAGGGTTCTC 60.093 54.545 0.00 0.00 39.25 2.87
2561 2948 1.909302 GATTGAGGTGGAGGGTTCTCA 59.091 52.381 0.00 0.00 41.69 3.27
2562 2949 1.352083 TTGAGGTGGAGGGTTCTCAG 58.648 55.000 0.00 0.00 41.69 3.35
2563 2950 0.191064 TGAGGTGGAGGGTTCTCAGT 59.809 55.000 0.00 0.00 41.69 3.41
2564 2951 0.610687 GAGGTGGAGGGTTCTCAGTG 59.389 60.000 0.00 0.00 41.69 3.66
2565 2952 0.104934 AGGTGGAGGGTTCTCAGTGT 60.105 55.000 0.00 0.00 41.69 3.55
2566 2953 1.149288 AGGTGGAGGGTTCTCAGTGTA 59.851 52.381 0.00 0.00 41.69 2.90
2567 2954 1.275573 GGTGGAGGGTTCTCAGTGTAC 59.724 57.143 0.00 0.00 41.69 2.90
2568 2955 1.968493 GTGGAGGGTTCTCAGTGTACA 59.032 52.381 0.00 0.00 41.69 2.90
2569 2956 2.567615 GTGGAGGGTTCTCAGTGTACAT 59.432 50.000 0.00 0.00 41.69 2.29
2570 2957 3.008049 GTGGAGGGTTCTCAGTGTACATT 59.992 47.826 0.00 0.00 41.69 2.71
2571 2958 3.650942 TGGAGGGTTCTCAGTGTACATTT 59.349 43.478 0.00 0.00 41.69 2.32
2572 2959 4.254492 GGAGGGTTCTCAGTGTACATTTC 58.746 47.826 0.00 0.00 41.69 2.17
2573 2960 4.020128 GGAGGGTTCTCAGTGTACATTTCT 60.020 45.833 0.00 0.00 41.69 2.52
2574 2961 5.513267 GGAGGGTTCTCAGTGTACATTTCTT 60.513 44.000 0.00 0.00 41.69 2.52
2575 2962 5.308825 AGGGTTCTCAGTGTACATTTCTTG 58.691 41.667 0.00 0.00 0.00 3.02
2576 2963 5.071788 AGGGTTCTCAGTGTACATTTCTTGA 59.928 40.000 0.00 0.00 0.00 3.02
2577 2964 5.763204 GGGTTCTCAGTGTACATTTCTTGAA 59.237 40.000 0.00 0.00 0.00 2.69
2578 2965 6.262273 GGGTTCTCAGTGTACATTTCTTGAAA 59.738 38.462 0.00 0.00 0.00 2.69
2579 2966 7.201785 GGGTTCTCAGTGTACATTTCTTGAAAA 60.202 37.037 0.00 0.00 0.00 2.29
2580 2967 7.644157 GGTTCTCAGTGTACATTTCTTGAAAAC 59.356 37.037 0.00 2.55 0.00 2.43
2581 2968 7.259290 TCTCAGTGTACATTTCTTGAAAACC 57.741 36.000 0.00 0.00 0.00 3.27
2582 2969 6.262273 TCTCAGTGTACATTTCTTGAAAACCC 59.738 38.462 0.00 0.00 0.00 4.11
2583 2970 5.300792 TCAGTGTACATTTCTTGAAAACCCC 59.699 40.000 0.00 0.00 0.00 4.95
2584 2971 4.587262 AGTGTACATTTCTTGAAAACCCCC 59.413 41.667 0.00 0.00 0.00 5.40
2585 2972 4.587262 GTGTACATTTCTTGAAAACCCCCT 59.413 41.667 0.00 0.00 0.00 4.79
2586 2973 5.771165 GTGTACATTTCTTGAAAACCCCCTA 59.229 40.000 0.00 0.00 0.00 3.53
2587 2974 6.007703 TGTACATTTCTTGAAAACCCCCTAG 58.992 40.000 0.00 0.00 0.00 3.02
2588 2975 5.074746 ACATTTCTTGAAAACCCCCTAGT 57.925 39.130 0.00 0.00 0.00 2.57
2589 2976 6.208840 ACATTTCTTGAAAACCCCCTAGTA 57.791 37.500 0.00 0.00 0.00 1.82
2590 2977 6.008331 ACATTTCTTGAAAACCCCCTAGTAC 58.992 40.000 0.00 0.00 0.00 2.73
2591 2978 5.917545 TTTCTTGAAAACCCCCTAGTACT 57.082 39.130 0.00 0.00 0.00 2.73
2592 2979 7.017850 ACATTTCTTGAAAACCCCCTAGTACTA 59.982 37.037 1.89 1.89 0.00 1.82
2593 2980 6.616237 TTCTTGAAAACCCCCTAGTACTAG 57.384 41.667 21.11 21.11 0.00 2.57
2594 2981 5.658474 TCTTGAAAACCCCCTAGTACTAGT 58.342 41.667 24.84 7.79 0.00 2.57
2595 2982 6.086775 TCTTGAAAACCCCCTAGTACTAGTT 58.913 40.000 24.84 13.49 0.00 2.24
2596 2983 7.248237 TCTTGAAAACCCCCTAGTACTAGTTA 58.752 38.462 24.84 2.61 0.00 2.24
2597 2984 6.857437 TGAAAACCCCCTAGTACTAGTTAC 57.143 41.667 24.84 12.98 0.00 2.50
2598 2985 6.322126 TGAAAACCCCCTAGTACTAGTTACA 58.678 40.000 24.84 14.80 32.41 2.41
2599 2986 6.961721 TGAAAACCCCCTAGTACTAGTTACAT 59.038 38.462 24.84 8.58 32.41 2.29
2600 2987 8.121833 TGAAAACCCCCTAGTACTAGTTACATA 58.878 37.037 24.84 4.14 32.41 2.29
2601 2988 9.152327 GAAAACCCCCTAGTACTAGTTACATAT 57.848 37.037 24.84 9.24 32.41 1.78
2602 2989 8.488308 AAACCCCCTAGTACTAGTTACATATG 57.512 38.462 24.84 9.64 32.41 1.78
2603 2990 6.559429 ACCCCCTAGTACTAGTTACATATGG 58.441 44.000 24.84 16.63 32.41 2.74
2604 2991 6.336389 ACCCCCTAGTACTAGTTACATATGGA 59.664 42.308 24.84 0.00 32.41 3.41
2605 2992 7.146888 ACCCCCTAGTACTAGTTACATATGGAA 60.147 40.741 24.84 0.95 32.41 3.53
2606 2993 7.396623 CCCCCTAGTACTAGTTACATATGGAAG 59.603 44.444 24.84 7.78 32.41 3.46
2607 2994 8.168725 CCCCTAGTACTAGTTACATATGGAAGA 58.831 40.741 24.84 0.00 32.41 2.87
2608 2995 9.756571 CCCTAGTACTAGTTACATATGGAAGAT 57.243 37.037 24.84 0.00 32.41 2.40
2618 3005 9.461312 AGTTACATATGGAAGATAACTTTTGCA 57.539 29.630 7.80 0.00 33.35 4.08
2621 3008 8.121305 ACATATGGAAGATAACTTTTGCAACA 57.879 30.769 7.80 0.00 36.39 3.33
2622 3009 8.584157 ACATATGGAAGATAACTTTTGCAACAA 58.416 29.630 7.80 0.00 36.39 2.83
2623 3010 8.863049 CATATGGAAGATAACTTTTGCAACAAC 58.137 33.333 0.00 0.00 36.39 3.32
2624 3011 5.596845 TGGAAGATAACTTTTGCAACAACC 58.403 37.500 0.00 0.00 36.39 3.77
2625 3012 5.127845 TGGAAGATAACTTTTGCAACAACCA 59.872 36.000 0.00 0.00 36.39 3.67
2626 3013 5.462068 GGAAGATAACTTTTGCAACAACCAC 59.538 40.000 0.00 0.00 36.39 4.16
2627 3014 4.944048 AGATAACTTTTGCAACAACCACC 58.056 39.130 0.00 0.00 0.00 4.61
2628 3015 2.394930 AACTTTTGCAACAACCACCC 57.605 45.000 0.00 0.00 0.00 4.61
2629 3016 1.270907 ACTTTTGCAACAACCACCCA 58.729 45.000 0.00 0.00 0.00 4.51
2630 3017 1.625818 ACTTTTGCAACAACCACCCAA 59.374 42.857 0.00 0.00 0.00 4.12
2631 3018 2.039084 ACTTTTGCAACAACCACCCAAA 59.961 40.909 0.00 0.00 0.00 3.28
2632 3019 2.859165 TTTGCAACAACCACCCAAAA 57.141 40.000 0.00 0.00 0.00 2.44
2633 3020 3.356529 TTTGCAACAACCACCCAAAAT 57.643 38.095 0.00 0.00 0.00 1.82
2634 3021 3.356529 TTGCAACAACCACCCAAAATT 57.643 38.095 0.00 0.00 0.00 1.82
2635 3022 3.356529 TGCAACAACCACCCAAAATTT 57.643 38.095 0.00 0.00 0.00 1.82
2636 3023 3.274288 TGCAACAACCACCCAAAATTTC 58.726 40.909 0.00 0.00 0.00 2.17
2637 3024 3.054802 TGCAACAACCACCCAAAATTTCT 60.055 39.130 0.00 0.00 0.00 2.52
2638 3025 4.162320 TGCAACAACCACCCAAAATTTCTA 59.838 37.500 0.00 0.00 0.00 2.10
2639 3026 5.119694 GCAACAACCACCCAAAATTTCTAA 58.880 37.500 0.00 0.00 0.00 2.10
2640 3027 5.762711 GCAACAACCACCCAAAATTTCTAAT 59.237 36.000 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.135527 ACGTATCGCCGAAAATCCTGA 59.864 47.619 0.00 0.00 0.00 3.86
3 4 2.304751 AACGTATCGCCGAAAATCCT 57.695 45.000 0.00 0.00 0.00 3.24
4 5 3.181518 TGAAAACGTATCGCCGAAAATCC 60.182 43.478 0.00 0.00 0.00 3.01
5 6 3.993547 TGAAAACGTATCGCCGAAAATC 58.006 40.909 0.00 0.00 0.00 2.17
6 7 3.434299 ACTGAAAACGTATCGCCGAAAAT 59.566 39.130 0.00 0.00 0.00 1.82
7 8 2.801679 ACTGAAAACGTATCGCCGAAAA 59.198 40.909 0.00 0.00 0.00 2.29
9 10 1.722464 CACTGAAAACGTATCGCCGAA 59.278 47.619 0.00 0.00 0.00 4.30
11 12 0.368907 CCACTGAAAACGTATCGCCG 59.631 55.000 0.00 0.00 0.00 6.46
12 13 1.717194 TCCACTGAAAACGTATCGCC 58.283 50.000 0.00 0.00 0.00 5.54
13 14 2.093783 CCTTCCACTGAAAACGTATCGC 59.906 50.000 0.00 0.00 0.00 4.58
15 16 4.817517 TCTCCTTCCACTGAAAACGTATC 58.182 43.478 0.00 0.00 0.00 2.24
16 17 4.884668 TCTCCTTCCACTGAAAACGTAT 57.115 40.909 0.00 0.00 0.00 3.06
17 18 4.566004 CATCTCCTTCCACTGAAAACGTA 58.434 43.478 0.00 0.00 0.00 3.57
18 19 3.403038 CATCTCCTTCCACTGAAAACGT 58.597 45.455 0.00 0.00 0.00 3.99
19 20 2.160417 GCATCTCCTTCCACTGAAAACG 59.840 50.000 0.00 0.00 0.00 3.60
20 21 3.416156 AGCATCTCCTTCCACTGAAAAC 58.584 45.455 0.00 0.00 0.00 2.43
21 22 3.679389 GAGCATCTCCTTCCACTGAAAA 58.321 45.455 0.00 0.00 0.00 2.29
22 23 3.340814 GAGCATCTCCTTCCACTGAAA 57.659 47.619 0.00 0.00 0.00 2.69
45 46 2.531912 TCGTAGACGTCTCGTAATCGAC 59.468 50.000 23.89 11.03 41.37 4.20
46 47 2.797491 TCGTAGACGTCTCGTAATCGA 58.203 47.619 23.89 18.59 41.37 3.59
47 48 3.181178 TCATCGTAGACGTCTCGTAATCG 59.819 47.826 23.89 16.79 42.51 3.34
48 49 4.208873 AGTCATCGTAGACGTCTCGTAATC 59.791 45.833 23.89 15.57 42.51 1.75
49 50 4.118410 AGTCATCGTAGACGTCTCGTAAT 58.882 43.478 23.89 12.39 42.51 1.89
50 51 3.515630 AGTCATCGTAGACGTCTCGTAA 58.484 45.455 23.89 10.71 42.51 3.18
51 52 3.156511 AGTCATCGTAGACGTCTCGTA 57.843 47.619 23.89 14.45 42.51 3.43
52 53 2.007360 AGTCATCGTAGACGTCTCGT 57.993 50.000 23.89 12.52 42.51 4.18
53 54 2.594728 CGAAGTCATCGTAGACGTCTCG 60.595 54.545 23.89 23.27 46.52 4.04
54 55 2.958908 CGAAGTCATCGTAGACGTCTC 58.041 52.381 23.89 12.76 46.52 3.36
64 65 7.220875 TCATCTTGAGATTTTACGAAGTCATCG 59.779 37.037 0.00 0.00 44.39 3.84
65 66 8.412608 TCATCTTGAGATTTTACGAAGTCATC 57.587 34.615 0.00 0.00 35.39 2.92
66 67 8.824781 CATCATCTTGAGATTTTACGAAGTCAT 58.175 33.333 0.00 0.00 35.39 3.06
67 68 7.819415 ACATCATCTTGAGATTTTACGAAGTCA 59.181 33.333 0.00 0.00 35.39 3.41
68 69 8.113062 CACATCATCTTGAGATTTTACGAAGTC 58.887 37.037 0.00 0.00 35.39 3.01
69 70 7.604164 ACACATCATCTTGAGATTTTACGAAGT 59.396 33.333 0.00 0.00 37.29 3.01
70 71 7.968246 ACACATCATCTTGAGATTTTACGAAG 58.032 34.615 0.00 0.00 31.21 3.79
71 72 7.602265 TGACACATCATCTTGAGATTTTACGAA 59.398 33.333 0.00 0.00 31.21 3.85
72 73 7.096551 TGACACATCATCTTGAGATTTTACGA 58.903 34.615 0.00 0.00 31.21 3.43
73 74 7.294676 TGACACATCATCTTGAGATTTTACG 57.705 36.000 0.00 0.00 31.21 3.18
74 75 7.065563 AGCTGACACATCATCTTGAGATTTTAC 59.934 37.037 0.00 0.00 33.22 2.01
75 76 7.108194 AGCTGACACATCATCTTGAGATTTTA 58.892 34.615 0.00 0.00 33.22 1.52
76 77 5.944599 AGCTGACACATCATCTTGAGATTTT 59.055 36.000 0.00 0.00 33.22 1.82
77 78 5.498393 AGCTGACACATCATCTTGAGATTT 58.502 37.500 0.00 0.00 33.22 2.17
78 79 5.100344 AGCTGACACATCATCTTGAGATT 57.900 39.130 0.00 0.00 33.22 2.40
79 80 4.161754 TGAGCTGACACATCATCTTGAGAT 59.838 41.667 0.00 0.00 31.36 2.75
80 81 3.512724 TGAGCTGACACATCATCTTGAGA 59.487 43.478 0.00 0.00 31.36 3.27
81 82 3.858247 TGAGCTGACACATCATCTTGAG 58.142 45.455 0.00 0.00 31.36 3.02
82 83 3.260128 ACTGAGCTGACACATCATCTTGA 59.740 43.478 0.00 0.00 31.36 3.02
83 84 3.597255 ACTGAGCTGACACATCATCTTG 58.403 45.455 0.00 0.00 31.36 3.02
84 85 3.514706 AGACTGAGCTGACACATCATCTT 59.485 43.478 0.00 0.00 31.36 2.40
85 86 3.098377 AGACTGAGCTGACACATCATCT 58.902 45.455 0.00 0.00 33.95 2.90
86 87 3.130869 AGAGACTGAGCTGACACATCATC 59.869 47.826 0.00 0.00 33.22 2.92
87 88 3.098377 AGAGACTGAGCTGACACATCAT 58.902 45.455 0.00 0.00 33.22 2.45
88 89 2.491298 GAGAGACTGAGCTGACACATCA 59.509 50.000 0.00 0.00 0.00 3.07
89 90 2.477694 CGAGAGACTGAGCTGACACATC 60.478 54.545 0.00 0.00 0.00 3.06
90 91 1.472082 CGAGAGACTGAGCTGACACAT 59.528 52.381 0.00 0.00 0.00 3.21
91 92 0.877743 CGAGAGACTGAGCTGACACA 59.122 55.000 0.00 0.00 0.00 3.72
92 93 0.170116 CCGAGAGACTGAGCTGACAC 59.830 60.000 0.00 0.00 0.00 3.67
93 94 0.036875 TCCGAGAGACTGAGCTGACA 59.963 55.000 0.00 0.00 0.00 3.58
94 95 0.732571 CTCCGAGAGACTGAGCTGAC 59.267 60.000 0.00 0.00 0.00 3.51
95 96 0.615850 TCTCCGAGAGACTGAGCTGA 59.384 55.000 0.00 0.00 33.35 4.26
96 97 1.334556 CATCTCCGAGAGACTGAGCTG 59.665 57.143 4.07 0.00 41.76 4.24
97 98 1.064758 ACATCTCCGAGAGACTGAGCT 60.065 52.381 4.07 0.00 41.76 4.09
98 99 1.388547 ACATCTCCGAGAGACTGAGC 58.611 55.000 4.07 0.00 41.76 4.26
99 100 3.013219 TGAACATCTCCGAGAGACTGAG 58.987 50.000 4.07 0.00 41.76 3.35
100 101 3.073274 TGAACATCTCCGAGAGACTGA 57.927 47.619 4.07 0.00 41.76 3.41
101 102 5.298026 TCTTATGAACATCTCCGAGAGACTG 59.702 44.000 4.07 0.28 41.76 3.51
102 103 5.441500 TCTTATGAACATCTCCGAGAGACT 58.558 41.667 4.07 0.00 41.76 3.24
103 104 5.298276 ACTCTTATGAACATCTCCGAGAGAC 59.702 44.000 4.07 0.00 41.76 3.36
104 105 5.441500 ACTCTTATGAACATCTCCGAGAGA 58.558 41.667 4.07 6.14 43.20 3.10
105 106 5.766150 ACTCTTATGAACATCTCCGAGAG 57.234 43.478 4.07 0.00 36.39 3.20
106 107 7.054751 TCTTACTCTTATGAACATCTCCGAGA 58.945 38.462 0.00 0.00 0.00 4.04
107 108 7.265647 TCTTACTCTTATGAACATCTCCGAG 57.734 40.000 0.00 0.00 0.00 4.63
108 109 7.285629 ACATCTTACTCTTATGAACATCTCCGA 59.714 37.037 0.00 0.00 0.00 4.55
109 110 7.380870 CACATCTTACTCTTATGAACATCTCCG 59.619 40.741 0.00 0.00 0.00 4.63
110 111 7.170658 GCACATCTTACTCTTATGAACATCTCC 59.829 40.741 0.00 0.00 0.00 3.71
111 112 7.096271 CGCACATCTTACTCTTATGAACATCTC 60.096 40.741 0.00 0.00 0.00 2.75
112 113 6.699204 CGCACATCTTACTCTTATGAACATCT 59.301 38.462 0.00 0.00 0.00 2.90
113 114 6.477033 ACGCACATCTTACTCTTATGAACATC 59.523 38.462 0.00 0.00 0.00 3.06
114 115 6.256539 CACGCACATCTTACTCTTATGAACAT 59.743 38.462 0.00 0.00 0.00 2.71
115 116 5.576774 CACGCACATCTTACTCTTATGAACA 59.423 40.000 0.00 0.00 0.00 3.18
116 117 5.577164 ACACGCACATCTTACTCTTATGAAC 59.423 40.000 0.00 0.00 0.00 3.18
117 118 5.576774 CACACGCACATCTTACTCTTATGAA 59.423 40.000 0.00 0.00 0.00 2.57
118 119 5.102313 CACACGCACATCTTACTCTTATGA 58.898 41.667 0.00 0.00 0.00 2.15
119 120 4.864806 ACACACGCACATCTTACTCTTATG 59.135 41.667 0.00 0.00 0.00 1.90
120 121 4.864806 CACACACGCACATCTTACTCTTAT 59.135 41.667 0.00 0.00 0.00 1.73
121 122 4.234574 CACACACGCACATCTTACTCTTA 58.765 43.478 0.00 0.00 0.00 2.10
122 123 3.059884 CACACACGCACATCTTACTCTT 58.940 45.455 0.00 0.00 0.00 2.85
123 124 2.677199 CACACACGCACATCTTACTCT 58.323 47.619 0.00 0.00 0.00 3.24
124 125 1.126846 GCACACACGCACATCTTACTC 59.873 52.381 0.00 0.00 0.00 2.59
125 126 1.148310 GCACACACGCACATCTTACT 58.852 50.000 0.00 0.00 0.00 2.24
126 127 0.179250 CGCACACACGCACATCTTAC 60.179 55.000 0.00 0.00 0.00 2.34
127 128 0.598942 ACGCACACACGCACATCTTA 60.599 50.000 0.00 0.00 36.19 2.10
128 129 1.436195 AACGCACACACGCACATCTT 61.436 50.000 0.00 0.00 36.19 2.40
129 130 1.436195 AAACGCACACACGCACATCT 61.436 50.000 0.00 0.00 36.19 2.90
130 131 0.233590 TAAACGCACACACGCACATC 59.766 50.000 0.00 0.00 36.19 3.06
131 132 0.871722 ATAAACGCACACACGCACAT 59.128 45.000 0.00 0.00 36.19 3.21
132 133 1.457683 CTATAAACGCACACACGCACA 59.542 47.619 0.00 0.00 36.19 4.57
133 134 1.201877 CCTATAAACGCACACACGCAC 60.202 52.381 0.00 0.00 36.19 5.34
134 135 1.072391 CCTATAAACGCACACACGCA 58.928 50.000 0.00 0.00 36.19 5.24
135 136 1.352114 TCCTATAAACGCACACACGC 58.648 50.000 0.00 0.00 36.19 5.34
136 137 5.290158 ACTTATTCCTATAAACGCACACACG 59.710 40.000 0.00 0.00 39.50 4.49
137 138 6.091713 ACACTTATTCCTATAAACGCACACAC 59.908 38.462 0.00 0.00 0.00 3.82
138 139 6.167685 ACACTTATTCCTATAAACGCACACA 58.832 36.000 0.00 0.00 0.00 3.72
139 140 6.657836 ACACTTATTCCTATAAACGCACAC 57.342 37.500 0.00 0.00 0.00 3.82
140 141 7.042321 GCATACACTTATTCCTATAAACGCACA 60.042 37.037 0.00 0.00 0.00 4.57
141 142 7.288672 GCATACACTTATTCCTATAAACGCAC 58.711 38.462 0.00 0.00 0.00 5.34
142 143 6.144886 CGCATACACTTATTCCTATAAACGCA 59.855 38.462 0.00 0.00 0.00 5.24
143 144 6.522761 CGCATACACTTATTCCTATAAACGC 58.477 40.000 0.00 0.00 0.00 4.84
144 145 6.522761 GCGCATACACTTATTCCTATAAACG 58.477 40.000 0.30 0.00 0.00 3.60
145 146 6.145048 ACGCGCATACACTTATTCCTATAAAC 59.855 38.462 5.73 0.00 0.00 2.01
146 147 6.218019 ACGCGCATACACTTATTCCTATAAA 58.782 36.000 5.73 0.00 0.00 1.40
147 148 5.775686 ACGCGCATACACTTATTCCTATAA 58.224 37.500 5.73 0.00 0.00 0.98
148 149 5.381174 ACGCGCATACACTTATTCCTATA 57.619 39.130 5.73 0.00 0.00 1.31
149 150 4.252971 ACGCGCATACACTTATTCCTAT 57.747 40.909 5.73 0.00 0.00 2.57
150 151 3.720949 ACGCGCATACACTTATTCCTA 57.279 42.857 5.73 0.00 0.00 2.94
151 152 2.596904 ACGCGCATACACTTATTCCT 57.403 45.000 5.73 0.00 0.00 3.36
152 153 3.668596 AAACGCGCATACACTTATTCC 57.331 42.857 5.73 0.00 0.00 3.01
153 154 5.999361 CGTATAAACGCGCATACACTTATTC 59.001 40.000 19.70 0.00 43.12 1.75
154 155 5.897133 CGTATAAACGCGCATACACTTATT 58.103 37.500 19.70 0.00 43.12 1.40
155 156 5.490472 CGTATAAACGCGCATACACTTAT 57.510 39.130 19.70 0.00 43.12 1.73
156 157 4.934623 CGTATAAACGCGCATACACTTA 57.065 40.909 19.70 0.00 43.12 2.24
157 158 3.829066 CGTATAAACGCGCATACACTT 57.171 42.857 19.70 0.00 43.12 3.16
168 169 0.643310 TGCAAGCGCTCGTATAAACG 59.357 50.000 12.06 0.00 42.82 3.60
169 170 2.540101 AGATGCAAGCGCTCGTATAAAC 59.460 45.455 12.06 0.00 39.64 2.01
170 171 2.539688 CAGATGCAAGCGCTCGTATAAA 59.460 45.455 12.06 0.00 39.64 1.40
171 172 2.127251 CAGATGCAAGCGCTCGTATAA 58.873 47.619 12.06 0.00 39.64 0.98
172 173 1.067060 ACAGATGCAAGCGCTCGTATA 59.933 47.619 12.06 0.00 39.64 1.47
173 174 0.179100 ACAGATGCAAGCGCTCGTAT 60.179 50.000 12.06 3.70 39.64 3.06
174 175 0.454196 TACAGATGCAAGCGCTCGTA 59.546 50.000 12.06 0.00 39.64 3.43
175 176 1.078759 GTACAGATGCAAGCGCTCGT 61.079 55.000 12.06 0.00 39.64 4.18
176 177 0.803768 AGTACAGATGCAAGCGCTCG 60.804 55.000 12.06 0.00 39.64 5.03
177 178 0.649475 CAGTACAGATGCAAGCGCTC 59.351 55.000 12.06 0.00 39.64 5.03
178 179 0.036952 ACAGTACAGATGCAAGCGCT 60.037 50.000 2.64 2.64 39.64 5.92
179 180 0.095935 CACAGTACAGATGCAAGCGC 59.904 55.000 0.00 0.00 39.24 5.92
180 181 1.432514 ACACAGTACAGATGCAAGCG 58.567 50.000 0.00 0.00 0.00 4.68
181 182 5.356882 TTTAACACAGTACAGATGCAAGC 57.643 39.130 0.00 0.00 0.00 4.01
182 183 7.189693 TCTTTTAACACAGTACAGATGCAAG 57.810 36.000 0.00 0.00 0.00 4.01
183 184 7.561021 TTCTTTTAACACAGTACAGATGCAA 57.439 32.000 0.00 0.00 0.00 4.08
184 185 7.561021 TTTCTTTTAACACAGTACAGATGCA 57.439 32.000 0.00 0.00 0.00 3.96
185 186 7.378728 GGTTTTCTTTTAACACAGTACAGATGC 59.621 37.037 0.00 0.00 0.00 3.91
186 187 7.586300 CGGTTTTCTTTTAACACAGTACAGATG 59.414 37.037 0.00 0.00 0.00 2.90
187 188 7.496591 TCGGTTTTCTTTTAACACAGTACAGAT 59.503 33.333 0.00 0.00 0.00 2.90
188 189 6.817641 TCGGTTTTCTTTTAACACAGTACAGA 59.182 34.615 0.00 0.00 0.00 3.41
189 190 6.903479 GTCGGTTTTCTTTTAACACAGTACAG 59.097 38.462 0.00 0.00 0.00 2.74
190 191 6.455380 CGTCGGTTTTCTTTTAACACAGTACA 60.455 38.462 0.00 0.00 0.00 2.90
191 192 5.898061 CGTCGGTTTTCTTTTAACACAGTAC 59.102 40.000 0.00 0.00 0.00 2.73
192 193 5.580297 ACGTCGGTTTTCTTTTAACACAGTA 59.420 36.000 0.00 0.00 0.00 2.74
193 194 4.392754 ACGTCGGTTTTCTTTTAACACAGT 59.607 37.500 0.00 0.00 0.00 3.55
194 195 4.726704 CACGTCGGTTTTCTTTTAACACAG 59.273 41.667 0.00 0.00 0.00 3.66
195 196 4.649977 CACGTCGGTTTTCTTTTAACACA 58.350 39.130 0.00 0.00 0.00 3.72
196 197 3.479590 GCACGTCGGTTTTCTTTTAACAC 59.520 43.478 0.00 0.00 0.00 3.32
197 198 3.374678 AGCACGTCGGTTTTCTTTTAACA 59.625 39.130 0.00 0.00 0.00 2.41
198 199 3.943958 AGCACGTCGGTTTTCTTTTAAC 58.056 40.909 0.00 0.00 0.00 2.01
199 200 4.619437 AAGCACGTCGGTTTTCTTTTAA 57.381 36.364 0.00 0.00 28.49 1.52
200 201 4.590226 GAAAGCACGTCGGTTTTCTTTTA 58.410 39.130 13.61 0.00 45.16 1.52
201 202 3.431856 GAAAGCACGTCGGTTTTCTTTT 58.568 40.909 13.61 0.00 45.16 2.27
202 203 2.538132 CGAAAGCACGTCGGTTTTCTTT 60.538 45.455 13.61 9.03 45.16 2.52
203 204 1.004292 CGAAAGCACGTCGGTTTTCTT 60.004 47.619 13.61 2.81 45.16 2.52
204 205 0.580104 CGAAAGCACGTCGGTTTTCT 59.420 50.000 13.61 0.00 45.16 2.52
205 206 3.052711 CGAAAGCACGTCGGTTTTC 57.947 52.632 13.61 9.74 45.16 2.29
225 226 6.204882 CCTCCGTGACAATTCTTCTTTTAAGT 59.795 38.462 0.00 0.00 0.00 2.24
302 305 0.472044 TGAAGCATTGGCCGGCTATA 59.528 50.000 28.56 12.42 40.01 1.31
303 306 1.103398 GTGAAGCATTGGCCGGCTAT 61.103 55.000 28.56 17.37 40.01 2.97
329 332 1.666553 CCTCCGCGCTTTGTGTGTA 60.667 57.895 5.56 0.00 0.00 2.90
340 343 4.708968 GCGCCTATCTCCTCCGCG 62.709 72.222 0.00 0.00 45.35 6.46
372 375 5.801380 TCATTAGGTTAAGTTCTGTGGTCC 58.199 41.667 0.00 0.00 0.00 4.46
373 376 5.875359 CCTCATTAGGTTAAGTTCTGTGGTC 59.125 44.000 0.00 0.00 38.19 4.02
393 396 3.466836 CTTGCGGCAAAGTATATCCTCA 58.533 45.455 17.13 0.00 0.00 3.86
503 506 1.790387 GTCTGCCAGATTGACGTGC 59.210 57.895 0.00 0.00 0.00 5.34
550 556 2.620115 CAGTTGTGTTCCTGCTGTGATT 59.380 45.455 0.00 0.00 0.00 2.57
551 557 2.224606 CAGTTGTGTTCCTGCTGTGAT 58.775 47.619 0.00 0.00 0.00 3.06
573 579 2.499303 AATGGGAAGGGCCGGTTGAG 62.499 60.000 1.90 0.00 37.63 3.02
758 974 2.405172 GGTTCCGAACAGACAGAGTTC 58.595 52.381 13.23 0.00 41.41 3.01
759 975 1.070289 GGGTTCCGAACAGACAGAGTT 59.930 52.381 13.23 0.00 0.00 3.01
760 976 0.680061 GGGTTCCGAACAGACAGAGT 59.320 55.000 13.23 0.00 0.00 3.24
761 977 0.037232 GGGGTTCCGAACAGACAGAG 60.037 60.000 13.23 0.00 0.00 3.35
762 978 1.477685 GGGGGTTCCGAACAGACAGA 61.478 60.000 13.23 0.00 0.00 3.41
765 981 1.302271 GTGGGGGTTCCGAACAGAC 60.302 63.158 13.23 2.95 38.76 3.51
907 1138 1.079888 GTTTGGCCATGGCGAAAGG 60.080 57.895 37.73 2.71 46.28 3.11
978 1209 0.957395 ATGCGACCAGGAGCTGTTTG 60.957 55.000 11.82 0.00 0.00 2.93
979 1210 0.957395 CATGCGACCAGGAGCTGTTT 60.957 55.000 11.82 0.00 0.00 2.83
998 1231 3.599704 GGAATGCGATGGCTGGCC 61.600 66.667 4.43 4.43 40.82 5.36
1027 1264 1.022903 AATCTCCTCCCCAGACTCCT 58.977 55.000 0.00 0.00 0.00 3.69
1081 1350 4.803426 CCGACTCTGCTCCCACGC 62.803 72.222 0.00 0.00 0.00 5.34
1532 1835 4.273257 TTGCACTCGACGGCGTCA 62.273 61.111 35.62 22.60 38.98 4.35
1565 1874 2.100603 GACGGAGAGAACGAGGCG 59.899 66.667 0.00 0.00 34.93 5.52
1586 1895 0.530211 CGATCCAGCTGAGCTCCAAG 60.530 60.000 17.39 3.74 36.40 3.61
1892 2213 0.970937 CCTCGTACCTCCTCTTGGCA 60.971 60.000 0.00 0.00 0.00 4.92
2140 2495 2.034001 CGAAGAGCAAAAACGTTCGTCT 60.034 45.455 0.00 0.00 36.21 4.18
2246 2632 8.480501 AGAATAAGCAAAAGAAATGCATGGTAT 58.519 29.630 0.00 0.00 46.22 2.73
2286 2673 2.429610 ACGACGTACAAATATCCAGCCT 59.570 45.455 0.00 0.00 0.00 4.58
2303 2690 4.640805 ACGATTGTACATGTTTCACGAC 57.359 40.909 2.30 0.00 0.00 4.34
2331 2718 3.186613 GGTTATTACAGCCGATAAGCAGC 59.813 47.826 0.00 0.00 36.65 5.25
2358 2745 8.095169 ACTTCCTTCGTCCCATAATATGAATAC 58.905 37.037 1.10 0.00 0.00 1.89
2433 2820 6.481976 CCCATTCAACTACATATTAGTTCGCA 59.518 38.462 7.11 0.00 35.76 5.10
2434 2821 6.073222 CCCCATTCAACTACATATTAGTTCGC 60.073 42.308 7.11 0.00 35.76 4.70
2435 2822 7.214381 TCCCCATTCAACTACATATTAGTTCG 58.786 38.462 7.11 0.00 35.76 3.95
2436 2823 7.173390 GCTCCCCATTCAACTACATATTAGTTC 59.827 40.741 7.11 0.00 35.76 3.01
2437 2824 6.998673 GCTCCCCATTCAACTACATATTAGTT 59.001 38.462 5.15 5.15 38.20 2.24
2438 2825 6.101150 TGCTCCCCATTCAACTACATATTAGT 59.899 38.462 0.00 0.00 0.00 2.24
2440 2827 6.508030 TGCTCCCCATTCAACTACATATTA 57.492 37.500 0.00 0.00 0.00 0.98
2441 2828 5.387113 TGCTCCCCATTCAACTACATATT 57.613 39.130 0.00 0.00 0.00 1.28
2442 2829 5.103940 AGTTGCTCCCCATTCAACTACATAT 60.104 40.000 5.20 0.00 45.82 1.78
2443 2830 4.227300 AGTTGCTCCCCATTCAACTACATA 59.773 41.667 5.20 0.00 45.82 2.29
2444 2831 3.010584 AGTTGCTCCCCATTCAACTACAT 59.989 43.478 5.20 0.00 45.82 2.29
2445 2832 2.375174 AGTTGCTCCCCATTCAACTACA 59.625 45.455 5.20 0.00 45.82 2.74
2446 2833 3.073274 AGTTGCTCCCCATTCAACTAC 57.927 47.619 5.20 0.00 45.82 2.73
2447 2834 4.919774 TTAGTTGCTCCCCATTCAACTA 57.080 40.909 9.25 9.25 45.82 2.24
2449 2836 4.864704 TTTTAGTTGCTCCCCATTCAAC 57.135 40.909 0.00 0.00 40.08 3.18
2450 2837 6.489603 TCTATTTTAGTTGCTCCCCATTCAA 58.510 36.000 0.00 0.00 0.00 2.69
2451 2838 6.073447 TCTATTTTAGTTGCTCCCCATTCA 57.927 37.500 0.00 0.00 0.00 2.57
2452 2839 6.828785 TCTTCTATTTTAGTTGCTCCCCATTC 59.171 38.462 0.00 0.00 0.00 2.67
2453 2840 6.731467 TCTTCTATTTTAGTTGCTCCCCATT 58.269 36.000 0.00 0.00 0.00 3.16
2454 2841 6.327386 TCTTCTATTTTAGTTGCTCCCCAT 57.673 37.500 0.00 0.00 0.00 4.00
2455 2842 5.772393 TCTTCTATTTTAGTTGCTCCCCA 57.228 39.130 0.00 0.00 0.00 4.96
2456 2843 5.590663 CCTTCTTCTATTTTAGTTGCTCCCC 59.409 44.000 0.00 0.00 0.00 4.81
2457 2844 5.590663 CCCTTCTTCTATTTTAGTTGCTCCC 59.409 44.000 0.00 0.00 0.00 4.30
2458 2845 5.066634 GCCCTTCTTCTATTTTAGTTGCTCC 59.933 44.000 0.00 0.00 0.00 4.70
2459 2846 5.066634 GGCCCTTCTTCTATTTTAGTTGCTC 59.933 44.000 0.00 0.00 0.00 4.26
2460 2847 4.950475 GGCCCTTCTTCTATTTTAGTTGCT 59.050 41.667 0.00 0.00 0.00 3.91
2461 2848 4.950475 AGGCCCTTCTTCTATTTTAGTTGC 59.050 41.667 0.00 0.00 0.00 4.17
2462 2849 6.768381 CCTAGGCCCTTCTTCTATTTTAGTTG 59.232 42.308 0.00 0.00 0.00 3.16
2463 2850 6.677076 TCCTAGGCCCTTCTTCTATTTTAGTT 59.323 38.462 2.96 0.00 0.00 2.24
2464 2851 6.210522 TCCTAGGCCCTTCTTCTATTTTAGT 58.789 40.000 2.96 0.00 0.00 2.24
2465 2852 6.749036 TCCTAGGCCCTTCTTCTATTTTAG 57.251 41.667 2.96 0.00 0.00 1.85
2466 2853 6.849697 TCATCCTAGGCCCTTCTTCTATTTTA 59.150 38.462 2.96 0.00 0.00 1.52
2467 2854 5.672194 TCATCCTAGGCCCTTCTTCTATTTT 59.328 40.000 2.96 0.00 0.00 1.82
2468 2855 5.227593 TCATCCTAGGCCCTTCTTCTATTT 58.772 41.667 2.96 0.00 0.00 1.40
2469 2856 4.832492 TCATCCTAGGCCCTTCTTCTATT 58.168 43.478 2.96 0.00 0.00 1.73
2470 2857 4.493819 TCATCCTAGGCCCTTCTTCTAT 57.506 45.455 2.96 0.00 0.00 1.98
2471 2858 3.993658 TCATCCTAGGCCCTTCTTCTA 57.006 47.619 2.96 0.00 0.00 2.10
2472 2859 2.877154 TCATCCTAGGCCCTTCTTCT 57.123 50.000 2.96 0.00 0.00 2.85
2473 2860 3.456277 TCTTTCATCCTAGGCCCTTCTTC 59.544 47.826 2.96 0.00 0.00 2.87
2474 2861 3.464828 TCTTTCATCCTAGGCCCTTCTT 58.535 45.455 2.96 0.00 0.00 2.52
2475 2862 3.136641 TCTTTCATCCTAGGCCCTTCT 57.863 47.619 2.96 0.00 0.00 2.85
2476 2863 3.933861 TTCTTTCATCCTAGGCCCTTC 57.066 47.619 2.96 0.00 0.00 3.46
2477 2864 5.227593 TCTATTCTTTCATCCTAGGCCCTT 58.772 41.667 2.96 0.00 0.00 3.95
2478 2865 4.832492 TCTATTCTTTCATCCTAGGCCCT 58.168 43.478 2.96 0.00 0.00 5.19
2479 2866 5.568620 TTCTATTCTTTCATCCTAGGCCC 57.431 43.478 2.96 0.00 0.00 5.80
2480 2867 7.881775 TTTTTCTATTCTTTCATCCTAGGCC 57.118 36.000 2.96 0.00 0.00 5.19
2481 2868 9.125026 TCATTTTTCTATTCTTTCATCCTAGGC 57.875 33.333 2.96 0.00 0.00 3.93
2489 2876 9.590451 GCCATGATTCATTTTTCTATTCTTTCA 57.410 29.630 0.00 0.00 0.00 2.69
2490 2877 9.038803 GGCCATGATTCATTTTTCTATTCTTTC 57.961 33.333 0.00 0.00 0.00 2.62
2491 2878 7.707893 CGGCCATGATTCATTTTTCTATTCTTT 59.292 33.333 2.24 0.00 0.00 2.52
2492 2879 7.147846 ACGGCCATGATTCATTTTTCTATTCTT 60.148 33.333 2.24 0.00 0.00 2.52
2493 2880 6.322201 ACGGCCATGATTCATTTTTCTATTCT 59.678 34.615 2.24 0.00 0.00 2.40
2494 2881 6.507023 ACGGCCATGATTCATTTTTCTATTC 58.493 36.000 2.24 0.00 0.00 1.75
2495 2882 6.469782 ACGGCCATGATTCATTTTTCTATT 57.530 33.333 2.24 0.00 0.00 1.73
2496 2883 6.275335 CAACGGCCATGATTCATTTTTCTAT 58.725 36.000 2.24 0.00 0.00 1.98
2497 2884 5.394005 CCAACGGCCATGATTCATTTTTCTA 60.394 40.000 2.24 0.00 0.00 2.10
2498 2885 4.497300 CAACGGCCATGATTCATTTTTCT 58.503 39.130 2.24 0.00 0.00 2.52
2499 2886 3.618150 CCAACGGCCATGATTCATTTTTC 59.382 43.478 2.24 0.00 0.00 2.29
2500 2887 3.260380 TCCAACGGCCATGATTCATTTTT 59.740 39.130 2.24 0.00 0.00 1.94
2501 2888 2.830923 TCCAACGGCCATGATTCATTTT 59.169 40.909 2.24 0.00 0.00 1.82
2502 2889 2.455557 TCCAACGGCCATGATTCATTT 58.544 42.857 2.24 0.00 0.00 2.32
2503 2890 2.142356 TCCAACGGCCATGATTCATT 57.858 45.000 2.24 0.00 0.00 2.57
2504 2891 1.958579 CATCCAACGGCCATGATTCAT 59.041 47.619 2.24 0.00 0.00 2.57
2505 2892 1.391577 CATCCAACGGCCATGATTCA 58.608 50.000 2.24 0.00 0.00 2.57
2506 2893 0.670162 CCATCCAACGGCCATGATTC 59.330 55.000 2.24 0.00 0.00 2.52
2507 2894 0.258484 TCCATCCAACGGCCATGATT 59.742 50.000 2.24 0.00 0.00 2.57
2508 2895 0.258484 TTCCATCCAACGGCCATGAT 59.742 50.000 2.24 0.00 0.00 2.45
2509 2896 0.394216 CTTCCATCCAACGGCCATGA 60.394 55.000 2.24 0.00 0.00 3.07
2510 2897 0.394216 TCTTCCATCCAACGGCCATG 60.394 55.000 2.24 0.00 0.00 3.66
2511 2898 0.552848 ATCTTCCATCCAACGGCCAT 59.447 50.000 2.24 0.00 0.00 4.40
2512 2899 0.394216 CATCTTCCATCCAACGGCCA 60.394 55.000 2.24 0.00 0.00 5.36
2513 2900 0.107214 TCATCTTCCATCCAACGGCC 60.107 55.000 0.00 0.00 0.00 6.13
2514 2901 1.017387 GTCATCTTCCATCCAACGGC 58.983 55.000 0.00 0.00 0.00 5.68
2515 2902 1.668419 GGTCATCTTCCATCCAACGG 58.332 55.000 0.00 0.00 0.00 4.44
2516 2903 1.290203 CGGTCATCTTCCATCCAACG 58.710 55.000 0.00 0.00 0.00 4.10
2517 2904 1.065418 ACCGGTCATCTTCCATCCAAC 60.065 52.381 0.00 0.00 0.00 3.77
2518 2905 1.285280 ACCGGTCATCTTCCATCCAA 58.715 50.000 0.00 0.00 0.00 3.53
2519 2906 1.760613 GTACCGGTCATCTTCCATCCA 59.239 52.381 12.40 0.00 0.00 3.41
2520 2907 1.760613 TGTACCGGTCATCTTCCATCC 59.239 52.381 12.40 0.00 0.00 3.51
2521 2908 2.693591 TCTGTACCGGTCATCTTCCATC 59.306 50.000 12.40 0.00 0.00 3.51
2522 2909 2.747177 TCTGTACCGGTCATCTTCCAT 58.253 47.619 12.40 0.00 0.00 3.41
2523 2910 2.225382 TCTGTACCGGTCATCTTCCA 57.775 50.000 12.40 0.00 0.00 3.53
2524 2911 3.132289 TCAATCTGTACCGGTCATCTTCC 59.868 47.826 12.40 0.00 0.00 3.46
2525 2912 4.363999 CTCAATCTGTACCGGTCATCTTC 58.636 47.826 12.40 0.00 0.00 2.87
2526 2913 3.133003 CCTCAATCTGTACCGGTCATCTT 59.867 47.826 12.40 3.17 0.00 2.40
2527 2914 2.695666 CCTCAATCTGTACCGGTCATCT 59.304 50.000 12.40 0.00 0.00 2.90
2528 2915 2.431057 ACCTCAATCTGTACCGGTCATC 59.569 50.000 12.40 3.56 0.00 2.92
2529 2916 2.168521 CACCTCAATCTGTACCGGTCAT 59.831 50.000 12.40 0.00 0.00 3.06
2530 2917 1.548719 CACCTCAATCTGTACCGGTCA 59.451 52.381 12.40 8.60 0.00 4.02
2531 2918 1.134788 CCACCTCAATCTGTACCGGTC 60.135 57.143 12.40 3.29 0.00 4.79
2532 2919 0.902531 CCACCTCAATCTGTACCGGT 59.097 55.000 13.98 13.98 0.00 5.28
2533 2920 1.137086 CTCCACCTCAATCTGTACCGG 59.863 57.143 0.00 0.00 0.00 5.28
2534 2921 1.137086 CCTCCACCTCAATCTGTACCG 59.863 57.143 0.00 0.00 0.00 4.02
2535 2922 1.486726 CCCTCCACCTCAATCTGTACC 59.513 57.143 0.00 0.00 0.00 3.34
2536 2923 2.188817 ACCCTCCACCTCAATCTGTAC 58.811 52.381 0.00 0.00 0.00 2.90
2537 2924 2.642171 ACCCTCCACCTCAATCTGTA 57.358 50.000 0.00 0.00 0.00 2.74
2538 2925 1.630878 GAACCCTCCACCTCAATCTGT 59.369 52.381 0.00 0.00 0.00 3.41
2539 2926 1.912043 AGAACCCTCCACCTCAATCTG 59.088 52.381 0.00 0.00 0.00 2.90
2540 2927 2.192263 GAGAACCCTCCACCTCAATCT 58.808 52.381 0.00 0.00 33.30 2.40
2541 2928 1.909302 TGAGAACCCTCCACCTCAATC 59.091 52.381 0.00 0.00 38.66 2.67
2542 2929 1.912043 CTGAGAACCCTCCACCTCAAT 59.088 52.381 0.00 0.00 38.66 2.57
2543 2930 1.352083 CTGAGAACCCTCCACCTCAA 58.648 55.000 0.00 0.00 38.66 3.02
2544 2931 0.191064 ACTGAGAACCCTCCACCTCA 59.809 55.000 0.00 0.00 38.66 3.86
2545 2932 0.610687 CACTGAGAACCCTCCACCTC 59.389 60.000 0.00 0.00 38.66 3.85
2546 2933 0.104934 ACACTGAGAACCCTCCACCT 60.105 55.000 0.00 0.00 38.66 4.00
2547 2934 1.275573 GTACACTGAGAACCCTCCACC 59.724 57.143 0.00 0.00 38.66 4.61
2548 2935 1.968493 TGTACACTGAGAACCCTCCAC 59.032 52.381 0.00 0.00 38.66 4.02
2549 2936 2.391926 TGTACACTGAGAACCCTCCA 57.608 50.000 0.00 0.00 38.66 3.86
2550 2937 3.983044 AATGTACACTGAGAACCCTCC 57.017 47.619 0.00 0.00 38.66 4.30
2551 2938 5.153950 AGAAATGTACACTGAGAACCCTC 57.846 43.478 0.00 0.00 39.86 4.30
2552 2939 5.071788 TCAAGAAATGTACACTGAGAACCCT 59.928 40.000 0.00 0.00 0.00 4.34
2553 2940 5.305585 TCAAGAAATGTACACTGAGAACCC 58.694 41.667 0.00 0.00 0.00 4.11
2554 2941 6.861065 TTCAAGAAATGTACACTGAGAACC 57.139 37.500 0.00 0.00 0.00 3.62
2555 2942 7.644157 GGTTTTCAAGAAATGTACACTGAGAAC 59.356 37.037 0.00 7.87 0.00 3.01
2556 2943 7.201785 GGGTTTTCAAGAAATGTACACTGAGAA 60.202 37.037 0.00 0.00 0.00 2.87
2557 2944 6.262273 GGGTTTTCAAGAAATGTACACTGAGA 59.738 38.462 0.00 0.00 0.00 3.27
2558 2945 6.438763 GGGTTTTCAAGAAATGTACACTGAG 58.561 40.000 0.00 0.00 0.00 3.35
2559 2946 5.300792 GGGGTTTTCAAGAAATGTACACTGA 59.699 40.000 0.00 0.00 0.00 3.41
2560 2947 5.508994 GGGGGTTTTCAAGAAATGTACACTG 60.509 44.000 0.00 0.00 0.00 3.66
2561 2948 4.587262 GGGGGTTTTCAAGAAATGTACACT 59.413 41.667 0.00 0.00 0.00 3.55
2562 2949 4.587262 AGGGGGTTTTCAAGAAATGTACAC 59.413 41.667 0.00 0.00 0.00 2.90
2563 2950 4.810345 AGGGGGTTTTCAAGAAATGTACA 58.190 39.130 0.00 0.00 0.00 2.90
2564 2951 6.008331 ACTAGGGGGTTTTCAAGAAATGTAC 58.992 40.000 0.00 0.00 0.00 2.90
2565 2952 6.208840 ACTAGGGGGTTTTCAAGAAATGTA 57.791 37.500 0.00 0.00 0.00 2.29
2566 2953 5.074746 ACTAGGGGGTTTTCAAGAAATGT 57.925 39.130 0.00 0.00 0.00 2.71
2567 2954 6.246163 AGTACTAGGGGGTTTTCAAGAAATG 58.754 40.000 0.00 0.00 0.00 2.32
2568 2955 6.464530 AGTACTAGGGGGTTTTCAAGAAAT 57.535 37.500 0.00 0.00 0.00 2.17
2569 2956 5.917545 AGTACTAGGGGGTTTTCAAGAAA 57.082 39.130 0.00 0.00 0.00 2.52
2570 2957 6.086775 ACTAGTACTAGGGGGTTTTCAAGAA 58.913 40.000 29.05 0.00 37.49 2.52
2571 2958 5.658474 ACTAGTACTAGGGGGTTTTCAAGA 58.342 41.667 29.05 0.00 37.49 3.02
2572 2959 6.370186 AACTAGTACTAGGGGGTTTTCAAG 57.630 41.667 29.05 6.85 37.49 3.02
2573 2960 6.786959 TGTAACTAGTACTAGGGGGTTTTCAA 59.213 38.462 29.05 6.90 37.49 2.69
2574 2961 6.322126 TGTAACTAGTACTAGGGGGTTTTCA 58.678 40.000 29.05 16.49 37.49 2.69
2575 2962 6.857437 TGTAACTAGTACTAGGGGGTTTTC 57.143 41.667 29.05 14.53 37.49 2.29
2576 2963 8.931568 CATATGTAACTAGTACTAGGGGGTTTT 58.068 37.037 29.05 17.30 37.49 2.43
2577 2964 7.511714 CCATATGTAACTAGTACTAGGGGGTTT 59.488 40.741 29.05 17.90 37.49 3.27
2578 2965 7.015064 CCATATGTAACTAGTACTAGGGGGTT 58.985 42.308 29.05 18.83 37.49 4.11
2579 2966 6.336389 TCCATATGTAACTAGTACTAGGGGGT 59.664 42.308 29.05 15.83 37.49 4.95
2580 2967 6.797707 TCCATATGTAACTAGTACTAGGGGG 58.202 44.000 29.05 18.20 37.49 5.40
2581 2968 8.168725 TCTTCCATATGTAACTAGTACTAGGGG 58.831 40.741 29.05 17.38 37.49 4.79
2582 2969 9.756571 ATCTTCCATATGTAACTAGTACTAGGG 57.243 37.037 29.05 18.98 37.49 3.53
2592 2979 9.461312 TGCAAAAGTTATCTTCCATATGTAACT 57.539 29.630 8.96 8.96 37.23 2.24
2595 2982 9.237187 TGTTGCAAAAGTTATCTTCCATATGTA 57.763 29.630 0.00 0.00 32.90 2.29
2596 2983 8.121305 TGTTGCAAAAGTTATCTTCCATATGT 57.879 30.769 0.00 0.00 32.90 2.29
2597 2984 8.863049 GTTGTTGCAAAAGTTATCTTCCATATG 58.137 33.333 0.00 0.00 32.90 1.78
2598 2985 8.034804 GGTTGTTGCAAAAGTTATCTTCCATAT 58.965 33.333 0.00 0.00 32.90 1.78
2599 2986 7.014711 TGGTTGTTGCAAAAGTTATCTTCCATA 59.985 33.333 0.00 0.00 32.90 2.74
2600 2987 6.183360 TGGTTGTTGCAAAAGTTATCTTCCAT 60.183 34.615 0.00 0.00 32.90 3.41
2601 2988 5.127845 TGGTTGTTGCAAAAGTTATCTTCCA 59.872 36.000 0.00 0.00 32.90 3.53
2602 2989 5.462068 GTGGTTGTTGCAAAAGTTATCTTCC 59.538 40.000 0.00 0.00 32.90 3.46
2603 2990 5.462068 GGTGGTTGTTGCAAAAGTTATCTTC 59.538 40.000 0.00 0.00 32.90 2.87
2604 2991 5.356426 GGTGGTTGTTGCAAAAGTTATCTT 58.644 37.500 0.00 0.00 35.14 2.40
2605 2992 4.202212 GGGTGGTTGTTGCAAAAGTTATCT 60.202 41.667 0.00 0.00 0.00 1.98
2606 2993 4.055360 GGGTGGTTGTTGCAAAAGTTATC 58.945 43.478 0.00 0.00 0.00 1.75
2607 2994 3.452627 TGGGTGGTTGTTGCAAAAGTTAT 59.547 39.130 0.00 0.00 0.00 1.89
2608 2995 2.832129 TGGGTGGTTGTTGCAAAAGTTA 59.168 40.909 0.00 0.00 0.00 2.24
2609 2996 1.625818 TGGGTGGTTGTTGCAAAAGTT 59.374 42.857 0.00 0.00 0.00 2.66
2610 2997 1.270907 TGGGTGGTTGTTGCAAAAGT 58.729 45.000 0.00 0.00 0.00 2.66
2611 2998 2.393271 TTGGGTGGTTGTTGCAAAAG 57.607 45.000 0.00 0.00 0.00 2.27
2612 2999 2.859165 TTTGGGTGGTTGTTGCAAAA 57.141 40.000 0.00 0.00 0.00 2.44
2613 3000 2.859165 TTTTGGGTGGTTGTTGCAAA 57.141 40.000 0.00 0.00 0.00 3.68
2614 3001 3.356529 AATTTTGGGTGGTTGTTGCAA 57.643 38.095 0.00 0.00 0.00 4.08
2615 3002 3.054802 AGAAATTTTGGGTGGTTGTTGCA 60.055 39.130 0.00 0.00 0.00 4.08
2616 3003 3.540617 AGAAATTTTGGGTGGTTGTTGC 58.459 40.909 0.00 0.00 0.00 4.17
2617 3004 8.934825 CATATTAGAAATTTTGGGTGGTTGTTG 58.065 33.333 0.00 0.00 0.00 3.33
2618 3005 8.100164 CCATATTAGAAATTTTGGGTGGTTGTT 58.900 33.333 0.00 0.00 0.00 2.83
2619 3006 7.310983 CCCATATTAGAAATTTTGGGTGGTTGT 60.311 37.037 13.24 0.00 39.17 3.32
2620 3007 7.047271 CCCATATTAGAAATTTTGGGTGGTTG 58.953 38.462 13.24 0.00 39.17 3.77
2621 3008 7.194112 CCCATATTAGAAATTTTGGGTGGTT 57.806 36.000 13.24 0.00 39.17 3.67
2622 3009 6.806668 CCCATATTAGAAATTTTGGGTGGT 57.193 37.500 13.24 0.00 39.17 4.16
2627 3014 8.525290 AGACAGACCCATATTAGAAATTTTGG 57.475 34.615 0.00 0.00 0.00 3.28
2632 3019 9.836179 AGATCTAGACAGACCCATATTAGAAAT 57.164 33.333 0.00 0.00 32.25 2.17
2633 3020 9.303116 GAGATCTAGACAGACCCATATTAGAAA 57.697 37.037 0.00 0.00 32.25 2.52
2634 3021 8.448816 TGAGATCTAGACAGACCCATATTAGAA 58.551 37.037 0.00 0.00 32.25 2.10
2635 3022 7.990055 TGAGATCTAGACAGACCCATATTAGA 58.010 38.462 0.00 0.00 32.25 2.10
2636 3023 7.888021 ACTGAGATCTAGACAGACCCATATTAG 59.112 40.741 14.95 0.00 35.85 1.73
2637 3024 7.760607 ACTGAGATCTAGACAGACCCATATTA 58.239 38.462 14.95 0.00 35.85 0.98
2638 3025 6.619464 ACTGAGATCTAGACAGACCCATATT 58.381 40.000 14.95 0.00 35.85 1.28
2639 3026 6.212840 ACTGAGATCTAGACAGACCCATAT 57.787 41.667 14.95 0.00 35.85 1.78
2640 3027 5.626142 GACTGAGATCTAGACAGACCCATA 58.374 45.833 14.95 0.00 35.85 2.74
2876 3303 4.956075 GGGACAATGTTCTACCAATTCCAT 59.044 41.667 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.