Multiple sequence alignment - TraesCS3A01G383600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G383600 | chr3A | 100.000 | 3640 | 0 | 0 | 2171 | 5810 | 633052725 | 633056364 | 0.000000e+00 | 6722.0 |
1 | TraesCS3A01G383600 | chr3A | 100.000 | 1843 | 0 | 0 | 1 | 1843 | 633050555 | 633052397 | 0.000000e+00 | 3404.0 |
2 | TraesCS3A01G383600 | chr3A | 95.902 | 122 | 5 | 0 | 793 | 914 | 108372662 | 108372541 | 1.280000e-46 | 198.0 |
3 | TraesCS3A01G383600 | chr3A | 98.936 | 94 | 1 | 0 | 1738 | 1831 | 637292016 | 637291923 | 1.000000e-37 | 169.0 |
4 | TraesCS3A01G383600 | chr3A | 81.865 | 193 | 25 | 6 | 1238 | 1422 | 51283548 | 51283358 | 2.800000e-33 | 154.0 |
5 | TraesCS3A01G383600 | chr3A | 96.591 | 88 | 3 | 0 | 647 | 734 | 41977682 | 41977595 | 4.690000e-31 | 147.0 |
6 | TraesCS3A01G383600 | chr3A | 95.556 | 90 | 3 | 1 | 645 | 734 | 630763896 | 630763984 | 6.070000e-30 | 143.0 |
7 | TraesCS3A01G383600 | chr3A | 88.462 | 52 | 3 | 3 | 4908 | 4958 | 480152765 | 480152716 | 6.290000e-05 | 60.2 |
8 | TraesCS3A01G383600 | chr3D | 93.157 | 3668 | 140 | 47 | 2171 | 5810 | 490834254 | 490837838 | 0.000000e+00 | 5280.0 |
9 | TraesCS3A01G383600 | chr3D | 91.531 | 614 | 34 | 12 | 1136 | 1738 | 490833593 | 490834199 | 0.000000e+00 | 830.0 |
10 | TraesCS3A01G383600 | chr3D | 88.192 | 542 | 32 | 13 | 7 | 535 | 490832463 | 490832985 | 8.270000e-173 | 617.0 |
11 | TraesCS3A01G383600 | chr3D | 90.625 | 224 | 13 | 3 | 908 | 1124 | 490832983 | 490833205 | 2.050000e-74 | 291.0 |
12 | TraesCS3A01G383600 | chr3D | 83.871 | 186 | 25 | 5 | 1233 | 1415 | 39532553 | 39532370 | 7.740000e-39 | 172.0 |
13 | TraesCS3A01G383600 | chr3D | 84.348 | 115 | 12 | 6 | 1310 | 1420 | 432507630 | 432507742 | 2.210000e-19 | 108.0 |
14 | TraesCS3A01G383600 | chr3B | 92.912 | 2624 | 111 | 29 | 2171 | 4773 | 652734588 | 652737157 | 0.000000e+00 | 3746.0 |
15 | TraesCS3A01G383600 | chr3B | 88.273 | 776 | 43 | 18 | 5056 | 5808 | 652737199 | 652737949 | 0.000000e+00 | 885.0 |
16 | TraesCS3A01G383600 | chr3B | 87.377 | 713 | 50 | 19 | 1056 | 1748 | 652733850 | 652734542 | 0.000000e+00 | 782.0 |
17 | TraesCS3A01G383600 | chr3B | 88.679 | 583 | 44 | 7 | 2575 | 3145 | 304807207 | 304806635 | 0.000000e+00 | 691.0 |
18 | TraesCS3A01G383600 | chr3B | 85.923 | 547 | 55 | 12 | 8 | 535 | 652733191 | 652733734 | 1.090000e-156 | 564.0 |
19 | TraesCS3A01G383600 | chr3B | 94.595 | 74 | 3 | 1 | 4834 | 4906 | 3912653 | 3912726 | 4.760000e-21 | 113.0 |
20 | TraesCS3A01G383600 | chr3B | 95.455 | 66 | 0 | 3 | 737 | 802 | 776355545 | 776355607 | 1.030000e-17 | 102.0 |
21 | TraesCS3A01G383600 | chr2D | 91.391 | 151 | 7 | 3 | 649 | 794 | 645558334 | 645558483 | 9.870000e-48 | 202.0 |
22 | TraesCS3A01G383600 | chr2D | 79.842 | 253 | 43 | 5 | 1166 | 1415 | 336965921 | 336965674 | 1.660000e-40 | 178.0 |
23 | TraesCS3A01G383600 | chr2D | 97.938 | 97 | 2 | 0 | 1738 | 1834 | 357697090 | 357696994 | 1.000000e-37 | 169.0 |
24 | TraesCS3A01G383600 | chr2D | 98.936 | 94 | 1 | 0 | 1738 | 1831 | 377155983 | 377155890 | 1.000000e-37 | 169.0 |
25 | TraesCS3A01G383600 | chr2D | 95.349 | 43 | 1 | 1 | 4920 | 4961 | 36277535 | 36277577 | 3.760000e-07 | 67.6 |
26 | TraesCS3A01G383600 | chr7A | 97.391 | 115 | 3 | 0 | 534 | 648 | 6649506 | 6649392 | 4.590000e-46 | 196.0 |
27 | TraesCS3A01G383600 | chr7A | 93.651 | 126 | 8 | 0 | 788 | 913 | 534099506 | 534099631 | 7.690000e-44 | 189.0 |
28 | TraesCS3A01G383600 | chr7A | 98.936 | 94 | 1 | 0 | 1738 | 1831 | 161728391 | 161728484 | 1.000000e-37 | 169.0 |
29 | TraesCS3A01G383600 | chr7A | 94.737 | 95 | 4 | 1 | 641 | 734 | 578974591 | 578974685 | 4.690000e-31 | 147.0 |
30 | TraesCS3A01G383600 | chr7A | 75.817 | 306 | 53 | 16 | 1130 | 1422 | 449738351 | 449738648 | 1.020000e-27 | 135.0 |
31 | TraesCS3A01G383600 | chr7A | 96.825 | 63 | 0 | 2 | 737 | 798 | 245745917 | 245745978 | 2.860000e-18 | 104.0 |
32 | TraesCS3A01G383600 | chr7A | 94.030 | 67 | 4 | 0 | 4965 | 5031 | 343177143 | 343177209 | 1.030000e-17 | 102.0 |
33 | TraesCS3A01G383600 | chr7A | 95.238 | 42 | 1 | 1 | 4919 | 4959 | 70306748 | 70306789 | 1.350000e-06 | 65.8 |
34 | TraesCS3A01G383600 | chr5B | 96.522 | 115 | 4 | 0 | 534 | 648 | 517208047 | 517207933 | 2.140000e-44 | 191.0 |
35 | TraesCS3A01G383600 | chr5B | 92.248 | 129 | 10 | 0 | 788 | 916 | 487445335 | 487445463 | 3.580000e-42 | 183.0 |
36 | TraesCS3A01G383600 | chr5B | 98.947 | 95 | 1 | 0 | 1738 | 1832 | 502027101 | 502027195 | 2.780000e-38 | 171.0 |
37 | TraesCS3A01G383600 | chr5B | 98.936 | 94 | 1 | 0 | 1738 | 1831 | 511067068 | 511066975 | 1.000000e-37 | 169.0 |
38 | TraesCS3A01G383600 | chr5B | 90.361 | 83 | 7 | 1 | 4834 | 4915 | 492157457 | 492157539 | 2.210000e-19 | 108.0 |
39 | TraesCS3A01G383600 | chr5B | 92.647 | 68 | 3 | 2 | 737 | 804 | 239384556 | 239384491 | 4.790000e-16 | 97.1 |
40 | TraesCS3A01G383600 | chr5B | 92.593 | 54 | 2 | 2 | 4912 | 4964 | 269975246 | 269975194 | 6.240000e-10 | 76.8 |
41 | TraesCS3A01G383600 | chr5A | 93.701 | 127 | 8 | 0 | 788 | 914 | 593601190 | 593601064 | 2.140000e-44 | 191.0 |
42 | TraesCS3A01G383600 | chr5A | 92.248 | 129 | 10 | 0 | 788 | 916 | 7025212 | 7025084 | 3.580000e-42 | 183.0 |
43 | TraesCS3A01G383600 | chr5A | 92.647 | 68 | 5 | 0 | 4965 | 5032 | 661052139 | 661052072 | 1.330000e-16 | 99.0 |
44 | TraesCS3A01G383600 | chr2B | 96.522 | 115 | 4 | 0 | 534 | 648 | 786211172 | 786211058 | 2.140000e-44 | 191.0 |
45 | TraesCS3A01G383600 | chr2B | 77.597 | 308 | 57 | 9 | 1120 | 1422 | 404417210 | 404416910 | 5.980000e-40 | 176.0 |
46 | TraesCS3A01G383600 | chr2B | 100.000 | 94 | 0 | 0 | 1738 | 1831 | 670948183 | 670948090 | 2.150000e-39 | 174.0 |
47 | TraesCS3A01G383600 | chr2B | 97.674 | 86 | 2 | 0 | 649 | 734 | 58998386 | 58998301 | 1.300000e-31 | 148.0 |
48 | TraesCS3A01G383600 | chr2B | 94.118 | 68 | 4 | 0 | 4965 | 5032 | 631449805 | 631449872 | 2.860000e-18 | 104.0 |
49 | TraesCS3A01G383600 | chr2B | 90.909 | 77 | 6 | 1 | 4831 | 4906 | 19847645 | 19847721 | 1.030000e-17 | 102.0 |
50 | TraesCS3A01G383600 | chr2B | 91.892 | 74 | 5 | 1 | 4834 | 4906 | 717039612 | 717039685 | 1.030000e-17 | 102.0 |
51 | TraesCS3A01G383600 | chr2B | 95.652 | 46 | 1 | 1 | 4920 | 4964 | 182041328 | 182041283 | 8.080000e-09 | 73.1 |
52 | TraesCS3A01G383600 | chr2B | 93.617 | 47 | 2 | 1 | 4919 | 4964 | 783701010 | 783700964 | 1.040000e-07 | 69.4 |
53 | TraesCS3A01G383600 | chr2B | 93.617 | 47 | 2 | 1 | 4919 | 4964 | 783945828 | 783945782 | 1.040000e-07 | 69.4 |
54 | TraesCS3A01G383600 | chr2B | 93.617 | 47 | 2 | 1 | 4919 | 4964 | 784185951 | 784185905 | 1.040000e-07 | 69.4 |
55 | TraesCS3A01G383600 | chr1A | 96.522 | 115 | 4 | 0 | 534 | 648 | 14428322 | 14428208 | 2.140000e-44 | 191.0 |
56 | TraesCS3A01G383600 | chr1A | 95.652 | 115 | 5 | 0 | 534 | 648 | 564566331 | 564566445 | 9.940000e-43 | 185.0 |
57 | TraesCS3A01G383600 | chr1A | 93.617 | 94 | 6 | 0 | 1738 | 1831 | 557511918 | 557512011 | 2.180000e-29 | 141.0 |
58 | TraesCS3A01G383600 | chr1A | 79.474 | 190 | 30 | 7 | 1229 | 1415 | 171466049 | 171466232 | 6.110000e-25 | 126.0 |
59 | TraesCS3A01G383600 | chr1A | 92.405 | 79 | 3 | 3 | 5244 | 5322 | 291221235 | 291221160 | 6.160000e-20 | 110.0 |
60 | TraesCS3A01G383600 | chr1A | 77.778 | 153 | 29 | 5 | 2346 | 2495 | 460334235 | 460334085 | 8.020000e-14 | 89.8 |
61 | TraesCS3A01G383600 | chr6A | 93.701 | 127 | 7 | 1 | 788 | 913 | 59323146 | 59323020 | 7.690000e-44 | 189.0 |
62 | TraesCS3A01G383600 | chr6A | 98.936 | 94 | 1 | 0 | 1738 | 1831 | 80820057 | 80819964 | 1.000000e-37 | 169.0 |
63 | TraesCS3A01G383600 | chr6A | 93.671 | 79 | 4 | 1 | 4834 | 4911 | 400130055 | 400130133 | 3.680000e-22 | 117.0 |
64 | TraesCS3A01G383600 | chr6A | 96.825 | 63 | 0 | 2 | 737 | 798 | 48644949 | 48644888 | 2.860000e-18 | 104.0 |
65 | TraesCS3A01G383600 | chr6A | 85.577 | 104 | 8 | 4 | 1319 | 1415 | 566891893 | 566891790 | 1.030000e-17 | 102.0 |
66 | TraesCS3A01G383600 | chr6A | 91.045 | 67 | 6 | 0 | 4965 | 5031 | 211412093 | 211412027 | 2.230000e-14 | 91.6 |
67 | TraesCS3A01G383600 | chr6A | 91.045 | 67 | 6 | 0 | 4965 | 5031 | 226275731 | 226275665 | 2.230000e-14 | 91.6 |
68 | TraesCS3A01G383600 | chr6A | 85.897 | 78 | 7 | 4 | 1343 | 1420 | 558899385 | 558899458 | 4.830000e-11 | 80.5 |
69 | TraesCS3A01G383600 | chr6A | 95.122 | 41 | 1 | 1 | 4920 | 4959 | 594664270 | 594664230 | 4.860000e-06 | 63.9 |
70 | TraesCS3A01G383600 | chr1B | 93.651 | 126 | 8 | 0 | 788 | 913 | 453770241 | 453770366 | 7.690000e-44 | 189.0 |
71 | TraesCS3A01G383600 | chr1B | 90.411 | 146 | 9 | 2 | 649 | 789 | 415119181 | 415119326 | 2.760000e-43 | 187.0 |
72 | TraesCS3A01G383600 | chr1B | 83.007 | 153 | 20 | 5 | 640 | 789 | 670820335 | 670820186 | 3.650000e-27 | 134.0 |
73 | TraesCS3A01G383600 | chr1B | 93.056 | 72 | 5 | 0 | 4962 | 5033 | 453136492 | 453136563 | 7.960000e-19 | 106.0 |
74 | TraesCS3A01G383600 | chr1B | 88.750 | 80 | 7 | 2 | 4834 | 4911 | 221928420 | 221928341 | 4.790000e-16 | 97.1 |
75 | TraesCS3A01G383600 | chr1B | 83.544 | 79 | 13 | 0 | 2351 | 2429 | 482716644 | 482716566 | 2.250000e-09 | 75.0 |
76 | TraesCS3A01G383600 | chrUn | 93.600 | 125 | 8 | 0 | 788 | 912 | 96661660 | 96661536 | 2.760000e-43 | 187.0 |
77 | TraesCS3A01G383600 | chrUn | 92.537 | 67 | 5 | 0 | 4965 | 5031 | 31863612 | 31863546 | 4.790000e-16 | 97.1 |
78 | TraesCS3A01G383600 | chrUn | 90.909 | 66 | 6 | 0 | 4966 | 5031 | 196959385 | 196959320 | 8.020000e-14 | 89.8 |
79 | TraesCS3A01G383600 | chrUn | 91.045 | 67 | 5 | 1 | 4965 | 5031 | 299817572 | 299817507 | 8.020000e-14 | 89.8 |
80 | TraesCS3A01G383600 | chrUn | 90.909 | 66 | 6 | 0 | 4966 | 5031 | 349811750 | 349811815 | 8.020000e-14 | 89.8 |
81 | TraesCS3A01G383600 | chrUn | 90.909 | 66 | 6 | 0 | 4966 | 5031 | 352763695 | 352763630 | 8.020000e-14 | 89.8 |
82 | TraesCS3A01G383600 | chrUn | 94.643 | 56 | 3 | 0 | 4978 | 5033 | 112683072 | 112683017 | 2.880000e-13 | 87.9 |
83 | TraesCS3A01G383600 | chrUn | 88.060 | 67 | 8 | 0 | 4965 | 5031 | 110238089 | 110238155 | 4.830000e-11 | 80.5 |
84 | TraesCS3A01G383600 | chrUn | 88.060 | 67 | 8 | 0 | 4965 | 5031 | 187694411 | 187694477 | 4.830000e-11 | 80.5 |
85 | TraesCS3A01G383600 | chrUn | 88.060 | 67 | 8 | 0 | 4965 | 5031 | 254193354 | 254193420 | 4.830000e-11 | 80.5 |
86 | TraesCS3A01G383600 | chrUn | 88.060 | 67 | 8 | 0 | 4965 | 5031 | 362464972 | 362465038 | 4.830000e-11 | 80.5 |
87 | TraesCS3A01G383600 | chrUn | 97.500 | 40 | 0 | 1 | 4920 | 4958 | 349077770 | 349077809 | 3.760000e-07 | 67.6 |
88 | TraesCS3A01G383600 | chrUn | 95.000 | 40 | 1 | 1 | 4920 | 4958 | 110238072 | 110238111 | 1.750000e-05 | 62.1 |
89 | TraesCS3A01G383600 | chrUn | 95.000 | 40 | 1 | 1 | 4920 | 4958 | 110307474 | 110307513 | 1.750000e-05 | 62.1 |
90 | TraesCS3A01G383600 | chrUn | 95.000 | 40 | 1 | 1 | 4920 | 4958 | 110321694 | 110321733 | 1.750000e-05 | 62.1 |
91 | TraesCS3A01G383600 | chrUn | 95.000 | 40 | 1 | 1 | 4920 | 4958 | 187694394 | 187694433 | 1.750000e-05 | 62.1 |
92 | TraesCS3A01G383600 | chrUn | 95.000 | 40 | 1 | 1 | 4920 | 4958 | 187700091 | 187700130 | 1.750000e-05 | 62.1 |
93 | TraesCS3A01G383600 | chrUn | 95.000 | 40 | 1 | 1 | 4920 | 4958 | 254193337 | 254193376 | 1.750000e-05 | 62.1 |
94 | TraesCS3A01G383600 | chrUn | 95.000 | 40 | 1 | 1 | 4920 | 4958 | 254199774 | 254199813 | 1.750000e-05 | 62.1 |
95 | TraesCS3A01G383600 | chr7B | 95.690 | 116 | 5 | 0 | 535 | 650 | 632109463 | 632109578 | 2.760000e-43 | 187.0 |
96 | TraesCS3A01G383600 | chr7B | 95.652 | 115 | 5 | 0 | 534 | 648 | 142777994 | 142778108 | 9.940000e-43 | 185.0 |
97 | TraesCS3A01G383600 | chr7B | 98.936 | 94 | 1 | 0 | 1738 | 1831 | 664317128 | 664317035 | 1.000000e-37 | 169.0 |
98 | TraesCS3A01G383600 | chr7B | 82.022 | 178 | 25 | 7 | 1247 | 1420 | 637237098 | 637237272 | 1.690000e-30 | 145.0 |
99 | TraesCS3A01G383600 | chr7B | 96.825 | 63 | 0 | 2 | 737 | 798 | 85135056 | 85135117 | 2.860000e-18 | 104.0 |
100 | TraesCS3A01G383600 | chr7B | 94.030 | 67 | 4 | 0 | 4965 | 5031 | 505750294 | 505750360 | 1.030000e-17 | 102.0 |
101 | TraesCS3A01G383600 | chr7B | 87.952 | 83 | 9 | 1 | 4834 | 4915 | 570266371 | 570266289 | 4.790000e-16 | 97.1 |
102 | TraesCS3A01G383600 | chr7B | 87.952 | 83 | 9 | 1 | 4834 | 4915 | 711079105 | 711079023 | 4.790000e-16 | 97.1 |
103 | TraesCS3A01G383600 | chr7B | 90.411 | 73 | 5 | 2 | 4835 | 4905 | 348411519 | 348411591 | 1.720000e-15 | 95.3 |
104 | TraesCS3A01G383600 | chr7B | 92.537 | 67 | 4 | 1 | 4965 | 5031 | 674226638 | 674226573 | 1.720000e-15 | 95.3 |
105 | TraesCS3A01G383600 | chr5D | 95.652 | 115 | 5 | 0 | 534 | 648 | 557778789 | 557778903 | 9.940000e-43 | 185.0 |
106 | TraesCS3A01G383600 | chr5D | 92.941 | 85 | 5 | 1 | 4834 | 4917 | 70665416 | 70665500 | 7.910000e-24 | 122.0 |
107 | TraesCS3A01G383600 | chr5D | 85.263 | 95 | 11 | 3 | 1247 | 1338 | 393615983 | 393615889 | 1.720000e-15 | 95.3 |
108 | TraesCS3A01G383600 | chr5D | 87.342 | 79 | 9 | 1 | 4965 | 5042 | 446918237 | 446918159 | 8.020000e-14 | 89.8 |
109 | TraesCS3A01G383600 | chr5D | 85.714 | 84 | 10 | 2 | 4834 | 4915 | 180107633 | 180107550 | 2.880000e-13 | 87.9 |
110 | TraesCS3A01G383600 | chr5D | 86.250 | 80 | 9 | 2 | 4834 | 4911 | 125898441 | 125898362 | 1.040000e-12 | 86.1 |
111 | TraesCS3A01G383600 | chr5D | 93.182 | 44 | 2 | 1 | 4919 | 4961 | 231773972 | 231774015 | 4.860000e-06 | 63.9 |
112 | TraesCS3A01G383600 | chr4A | 95.652 | 115 | 5 | 0 | 534 | 648 | 75352420 | 75352534 | 9.940000e-43 | 185.0 |
113 | TraesCS3A01G383600 | chr4A | 95.604 | 91 | 3 | 1 | 644 | 734 | 460894359 | 460894270 | 1.690000e-30 | 145.0 |
114 | TraesCS3A01G383600 | chr4A | 92.553 | 94 | 7 | 0 | 1738 | 1831 | 145882469 | 145882376 | 1.020000e-27 | 135.0 |
115 | TraesCS3A01G383600 | chr4A | 93.506 | 77 | 3 | 2 | 4831 | 4906 | 722340018 | 722340093 | 4.760000e-21 | 113.0 |
116 | TraesCS3A01G383600 | chr4A | 96.552 | 58 | 1 | 1 | 737 | 794 | 688964208 | 688964264 | 1.720000e-15 | 95.3 |
117 | TraesCS3A01G383600 | chr7D | 78.788 | 297 | 45 | 14 | 1138 | 1422 | 396136491 | 396136781 | 3.580000e-42 | 183.0 |
118 | TraesCS3A01G383600 | chr7D | 100.000 | 99 | 0 | 0 | 1738 | 1836 | 420738393 | 420738295 | 3.580000e-42 | 183.0 |
119 | TraesCS3A01G383600 | chr7D | 80.000 | 190 | 27 | 7 | 1233 | 1415 | 31111197 | 31111382 | 4.720000e-26 | 130.0 |
120 | TraesCS3A01G383600 | chr7D | 76.062 | 259 | 46 | 8 | 1167 | 1415 | 84253551 | 84253299 | 2.840000e-23 | 121.0 |
121 | TraesCS3A01G383600 | chr7D | 90.588 | 85 | 7 | 1 | 4834 | 4917 | 29601037 | 29600953 | 1.710000e-20 | 111.0 |
122 | TraesCS3A01G383600 | chr7D | 91.549 | 71 | 5 | 1 | 4834 | 4903 | 4288747 | 4288817 | 4.790000e-16 | 97.1 |
123 | TraesCS3A01G383600 | chr7D | 92.537 | 67 | 5 | 0 | 4965 | 5031 | 470204809 | 470204875 | 4.790000e-16 | 97.1 |
124 | TraesCS3A01G383600 | chr7D | 87.324 | 71 | 7 | 2 | 4834 | 4902 | 143085056 | 143085126 | 4.830000e-11 | 80.5 |
125 | TraesCS3A01G383600 | chr6B | 92.248 | 129 | 10 | 0 | 788 | 916 | 132155950 | 132155822 | 3.580000e-42 | 183.0 |
126 | TraesCS3A01G383600 | chr6B | 98.947 | 95 | 1 | 0 | 1738 | 1832 | 585570300 | 585570206 | 2.780000e-38 | 171.0 |
127 | TraesCS3A01G383600 | chr6B | 88.421 | 95 | 8 | 3 | 4818 | 4911 | 94585237 | 94585329 | 1.710000e-20 | 111.0 |
128 | TraesCS3A01G383600 | chr2A | 78.947 | 247 | 43 | 6 | 1172 | 1415 | 447145754 | 447145514 | 6.030000e-35 | 159.0 |
129 | TraesCS3A01G383600 | chr2A | 92.857 | 70 | 5 | 0 | 4962 | 5031 | 39327436 | 39327505 | 1.030000e-17 | 102.0 |
130 | TraesCS3A01G383600 | chr4B | 94.737 | 95 | 3 | 2 | 640 | 732 | 601298629 | 601298535 | 4.690000e-31 | 147.0 |
131 | TraesCS3A01G383600 | chr4B | 94.030 | 67 | 4 | 0 | 4965 | 5031 | 423051062 | 423050996 | 1.030000e-17 | 102.0 |
132 | TraesCS3A01G383600 | chr4B | 91.667 | 72 | 6 | 0 | 4965 | 5036 | 273622418 | 273622347 | 3.700000e-17 | 100.0 |
133 | TraesCS3A01G383600 | chr4B | 97.500 | 40 | 0 | 1 | 4920 | 4958 | 660430425 | 660430464 | 3.760000e-07 | 67.6 |
134 | TraesCS3A01G383600 | chr4B | 97.500 | 40 | 0 | 1 | 4920 | 4958 | 660442223 | 660442262 | 3.760000e-07 | 67.6 |
135 | TraesCS3A01G383600 | chr4B | 95.122 | 41 | 1 | 1 | 4919 | 4958 | 142056884 | 142056844 | 4.860000e-06 | 63.9 |
136 | TraesCS3A01G383600 | chr1D | 79.602 | 201 | 27 | 9 | 1234 | 1428 | 436705100 | 436704908 | 1.310000e-26 | 132.0 |
137 | TraesCS3A01G383600 | chr1D | 85.841 | 113 | 7 | 8 | 4920 | 5031 | 42068044 | 42068148 | 1.710000e-20 | 111.0 |
138 | TraesCS3A01G383600 | chr1D | 83.478 | 115 | 12 | 4 | 1315 | 1422 | 318718530 | 318718416 | 3.700000e-17 | 100.0 |
139 | TraesCS3A01G383600 | chr1D | 92.537 | 67 | 5 | 0 | 4965 | 5031 | 37206790 | 37206856 | 4.790000e-16 | 97.1 |
140 | TraesCS3A01G383600 | chr1D | 92.537 | 67 | 5 | 0 | 4965 | 5031 | 307830169 | 307830103 | 4.790000e-16 | 97.1 |
141 | TraesCS3A01G383600 | chr1D | 88.608 | 79 | 3 | 2 | 5244 | 5322 | 224378737 | 224378665 | 2.230000e-14 | 91.6 |
142 | TraesCS3A01G383600 | chr1D | 91.045 | 67 | 5 | 1 | 4965 | 5031 | 275947641 | 275947706 | 8.020000e-14 | 89.8 |
143 | TraesCS3A01G383600 | chr1D | 77.703 | 148 | 28 | 5 | 2351 | 2495 | 360481297 | 360481152 | 1.040000e-12 | 86.1 |
144 | TraesCS3A01G383600 | chr1D | 86.885 | 61 | 7 | 1 | 4834 | 4893 | 374221401 | 374221461 | 3.760000e-07 | 67.6 |
145 | TraesCS3A01G383600 | chr6D | 84.956 | 113 | 15 | 2 | 4920 | 5031 | 91146285 | 91146396 | 4.760000e-21 | 113.0 |
146 | TraesCS3A01G383600 | chr6D | 90.141 | 71 | 5 | 2 | 4834 | 4902 | 329484145 | 329484075 | 2.230000e-14 | 91.6 |
147 | TraesCS3A01G383600 | chr6D | 75.000 | 192 | 42 | 4 | 1236 | 1426 | 464849636 | 464849450 | 3.730000e-12 | 84.2 |
148 | TraesCS3A01G383600 | chr4D | 91.176 | 68 | 4 | 2 | 4965 | 5031 | 456274809 | 456274875 | 2.230000e-14 | 91.6 |
149 | TraesCS3A01G383600 | chr4D | 80.672 | 119 | 17 | 6 | 1307 | 1422 | 508266235 | 508266350 | 2.880000e-13 | 87.9 |
150 | TraesCS3A01G383600 | chr4D | 89.552 | 67 | 7 | 0 | 4965 | 5031 | 176779624 | 176779690 | 1.040000e-12 | 86.1 |
151 | TraesCS3A01G383600 | chr4D | 95.122 | 41 | 1 | 1 | 4919 | 4958 | 99662491 | 99662451 | 4.860000e-06 | 63.9 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G383600 | chr3A | 633050555 | 633056364 | 5809 | False | 5063.00 | 6722 | 100.00000 | 1 | 5810 | 2 | chr3A.!!$F2 | 5809 |
1 | TraesCS3A01G383600 | chr3D | 490832463 | 490837838 | 5375 | False | 1754.50 | 5280 | 90.87625 | 7 | 5810 | 4 | chr3D.!!$F2 | 5803 |
2 | TraesCS3A01G383600 | chr3B | 652733191 | 652737949 | 4758 | False | 1494.25 | 3746 | 88.62125 | 8 | 5808 | 4 | chr3B.!!$F3 | 5800 |
3 | TraesCS3A01G383600 | chr3B | 304806635 | 304807207 | 572 | True | 691.00 | 691 | 88.67900 | 2575 | 3145 | 1 | chr3B.!!$R1 | 570 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
776 | 799 | 0.033601 | AGTCTCTCGGAGGTGCTCAT | 60.034 | 55.0 | 4.96 | 0.0 | 31.08 | 2.90 | F |
1373 | 1790 | 0.037590 | TTATGTTGCCTTCCCGCACT | 59.962 | 50.0 | 0.00 | 0.0 | 38.83 | 4.40 | F |
1755 | 2178 | 0.037326 | AAGCCGAAGAATGTCGAGCA | 60.037 | 50.0 | 9.54 | 0.0 | 43.86 | 4.26 | F |
1759 | 2182 | 0.368227 | CGAAGAATGTCGAGCACAGC | 59.632 | 55.0 | 0.00 | 0.0 | 43.86 | 4.40 | F |
1795 | 2218 | 0.525668 | GATCCGTCGATCGTGCAGTT | 60.526 | 55.0 | 15.94 | 0.0 | 35.83 | 3.16 | F |
2968 | 3407 | 0.534877 | TGTGTGCGCCTCTTTGATGT | 60.535 | 50.0 | 4.18 | 0.0 | 0.00 | 3.06 | F |
2969 | 3408 | 0.593128 | GTGTGCGCCTCTTTGATGTT | 59.407 | 50.0 | 4.18 | 0.0 | 0.00 | 2.71 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1740 | 2163 | 0.368227 | GCTGTGCTCGACATTCTTCG | 59.632 | 55.000 | 0.00 | 0.0 | 40.53 | 3.79 | R |
3128 | 3567 | 0.672401 | TACTAGGTTGCGTTGCCAGC | 60.672 | 55.000 | 0.00 | 0.0 | 0.00 | 4.85 | R |
3517 | 3959 | 0.588252 | CAAACAGCCACGTCTGGAAG | 59.412 | 55.000 | 8.89 | 0.0 | 40.55 | 3.46 | R |
3580 | 4022 | 4.469657 | TCAGGCAATGAAGTACCTTGTTT | 58.530 | 39.130 | 0.00 | 0.0 | 34.02 | 2.83 | R |
3894 | 4336 | 6.367969 | ACACAAGTAAGCTAACCGATTAACAG | 59.632 | 38.462 | 0.00 | 0.0 | 0.00 | 3.16 | R |
4332 | 4777 | 0.393537 | CACCCTCTCCACATGAAGGC | 60.394 | 60.000 | 0.00 | 0.0 | 0.00 | 4.35 | R |
4858 | 5311 | 0.536724 | TGTCATCCGCACTACAGCAT | 59.463 | 50.000 | 0.00 | 0.0 | 0.00 | 3.79 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
19 | 20 | 0.588252 | CTCTTCTTGCAACACCCACG | 59.412 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
70 | 78 | 0.603569 | GTCTCCTTCTCGGTGCAAGA | 59.396 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
111 | 125 | 3.451178 | AGCGTTGTCTCACTACCCATAAT | 59.549 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
125 | 141 | 4.464008 | ACCCATAATCTCAAATGACGCAT | 58.536 | 39.130 | 0.00 | 0.00 | 0.00 | 4.73 |
156 | 173 | 1.369625 | ATGGCATCGGTCGACTTTTC | 58.630 | 50.000 | 16.46 | 0.00 | 0.00 | 2.29 |
187 | 204 | 4.270808 | GGCAACAACTTTGAACAAGAATGG | 59.729 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
215 | 232 | 3.007398 | AGTGGCTTCAGACTAGGAAGTTG | 59.993 | 47.826 | 8.46 | 0.00 | 42.88 | 3.16 |
227 | 244 | 8.361139 | CAGACTAGGAAGTTGTCTTCTAAAAGA | 58.639 | 37.037 | 7.69 | 0.00 | 46.47 | 2.52 |
268 | 285 | 4.209288 | CACAATGCTTATCCTAGTGCGTAC | 59.791 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
302 | 319 | 7.881232 | TGGAAAGAGAGGAACATAATAACGTTT | 59.119 | 33.333 | 5.91 | 0.00 | 0.00 | 3.60 |
410 | 432 | 5.172934 | TGATTTACCTGCTAAACTACCACG | 58.827 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
421 | 443 | 3.296709 | CTACCACGTTGCCGGAGCT | 62.297 | 63.158 | 5.05 | 0.00 | 40.80 | 4.09 |
498 | 521 | 0.166814 | GCTGTCTCGGTCATTGTTGC | 59.833 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
533 | 556 | 7.118825 | GTCCGGTATTTTATAGTTGCTTATCCC | 59.881 | 40.741 | 0.00 | 0.00 | 0.00 | 3.85 |
534 | 557 | 7.016858 | TCCGGTATTTTATAGTTGCTTATCCCT | 59.983 | 37.037 | 0.00 | 0.00 | 0.00 | 4.20 |
535 | 558 | 7.119262 | CCGGTATTTTATAGTTGCTTATCCCTG | 59.881 | 40.741 | 0.00 | 0.00 | 0.00 | 4.45 |
536 | 559 | 7.119262 | CGGTATTTTATAGTTGCTTATCCCTGG | 59.881 | 40.741 | 0.00 | 0.00 | 0.00 | 4.45 |
537 | 560 | 7.942894 | GGTATTTTATAGTTGCTTATCCCTGGT | 59.057 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
538 | 561 | 9.350951 | GTATTTTATAGTTGCTTATCCCTGGTT | 57.649 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
539 | 562 | 7.639113 | TTTTATAGTTGCTTATCCCTGGTTG | 57.361 | 36.000 | 0.00 | 0.00 | 0.00 | 3.77 |
540 | 563 | 4.862641 | ATAGTTGCTTATCCCTGGTTGT | 57.137 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
541 | 564 | 5.968676 | ATAGTTGCTTATCCCTGGTTGTA | 57.031 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
542 | 565 | 4.650972 | AGTTGCTTATCCCTGGTTGTAA | 57.349 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
543 | 566 | 5.193099 | AGTTGCTTATCCCTGGTTGTAAT | 57.807 | 39.130 | 0.00 | 0.00 | 0.00 | 1.89 |
544 | 567 | 4.949856 | AGTTGCTTATCCCTGGTTGTAATG | 59.050 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
545 | 568 | 3.897239 | TGCTTATCCCTGGTTGTAATGG | 58.103 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
546 | 569 | 3.222603 | GCTTATCCCTGGTTGTAATGGG | 58.777 | 50.000 | 0.00 | 0.00 | 40.95 | 4.00 |
547 | 570 | 3.832527 | CTTATCCCTGGTTGTAATGGGG | 58.167 | 50.000 | 0.00 | 0.00 | 40.05 | 4.96 |
548 | 571 | 3.522999 | TCCCTGGTTGTAATGGGGA | 57.477 | 52.632 | 0.00 | 0.00 | 43.15 | 4.81 |
549 | 572 | 1.295020 | TCCCTGGTTGTAATGGGGAG | 58.705 | 55.000 | 0.00 | 0.00 | 40.84 | 4.30 |
550 | 573 | 0.999712 | CCCTGGTTGTAATGGGGAGT | 59.000 | 55.000 | 0.00 | 0.00 | 39.42 | 3.85 |
551 | 574 | 2.201830 | CCCTGGTTGTAATGGGGAGTA | 58.798 | 52.381 | 0.00 | 0.00 | 39.42 | 2.59 |
552 | 575 | 2.783510 | CCCTGGTTGTAATGGGGAGTAT | 59.216 | 50.000 | 0.00 | 0.00 | 39.42 | 2.12 |
553 | 576 | 3.181443 | CCCTGGTTGTAATGGGGAGTATC | 60.181 | 52.174 | 0.00 | 0.00 | 39.42 | 2.24 |
554 | 577 | 3.458118 | CCTGGTTGTAATGGGGAGTATCA | 59.542 | 47.826 | 0.00 | 0.00 | 36.25 | 2.15 |
555 | 578 | 4.104738 | CCTGGTTGTAATGGGGAGTATCAT | 59.895 | 45.833 | 0.00 | 0.00 | 36.25 | 2.45 |
556 | 579 | 5.309543 | CCTGGTTGTAATGGGGAGTATCATA | 59.690 | 44.000 | 0.00 | 0.00 | 36.25 | 2.15 |
557 | 580 | 6.012508 | CCTGGTTGTAATGGGGAGTATCATAT | 60.013 | 42.308 | 0.00 | 0.00 | 36.25 | 1.78 |
558 | 581 | 7.182026 | CCTGGTTGTAATGGGGAGTATCATATA | 59.818 | 40.741 | 0.00 | 0.00 | 36.25 | 0.86 |
559 | 582 | 7.913789 | TGGTTGTAATGGGGAGTATCATATAC | 58.086 | 38.462 | 0.00 | 0.00 | 36.25 | 1.47 |
560 | 583 | 7.737607 | TGGTTGTAATGGGGAGTATCATATACT | 59.262 | 37.037 | 0.00 | 0.00 | 36.25 | 2.12 |
561 | 584 | 9.263446 | GGTTGTAATGGGGAGTATCATATACTA | 57.737 | 37.037 | 0.00 | 0.00 | 36.25 | 1.82 |
599 | 622 | 9.908747 | ATGATACTAGTGTATGATACTACCTCC | 57.091 | 37.037 | 5.39 | 0.00 | 39.29 | 4.30 |
600 | 623 | 8.327271 | TGATACTAGTGTATGATACTACCTCCC | 58.673 | 40.741 | 5.39 | 0.00 | 39.29 | 4.30 |
601 | 624 | 6.783517 | ACTAGTGTATGATACTACCTCCCT | 57.216 | 41.667 | 4.03 | 0.00 | 0.00 | 4.20 |
602 | 625 | 7.885209 | ACTAGTGTATGATACTACCTCCCTA | 57.115 | 40.000 | 4.03 | 0.00 | 0.00 | 3.53 |
603 | 626 | 8.285350 | ACTAGTGTATGATACTACCTCCCTAA | 57.715 | 38.462 | 4.03 | 0.00 | 0.00 | 2.69 |
604 | 627 | 8.902881 | ACTAGTGTATGATACTACCTCCCTAAT | 58.097 | 37.037 | 4.03 | 0.00 | 0.00 | 1.73 |
605 | 628 | 9.179909 | CTAGTGTATGATACTACCTCCCTAATG | 57.820 | 40.741 | 4.03 | 0.00 | 0.00 | 1.90 |
606 | 629 | 6.437793 | AGTGTATGATACTACCTCCCTAATGC | 59.562 | 42.308 | 4.03 | 0.00 | 0.00 | 3.56 |
607 | 630 | 6.210784 | GTGTATGATACTACCTCCCTAATGCA | 59.789 | 42.308 | 4.03 | 0.00 | 0.00 | 3.96 |
608 | 631 | 6.959954 | TGTATGATACTACCTCCCTAATGCAT | 59.040 | 38.462 | 4.03 | 0.00 | 0.00 | 3.96 |
609 | 632 | 8.119891 | TGTATGATACTACCTCCCTAATGCATA | 58.880 | 37.037 | 0.00 | 0.00 | 0.00 | 3.14 |
610 | 633 | 8.978472 | GTATGATACTACCTCCCTAATGCATAA | 58.022 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
611 | 634 | 8.629821 | ATGATACTACCTCCCTAATGCATAAT | 57.370 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
612 | 635 | 9.729550 | ATGATACTACCTCCCTAATGCATAATA | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
613 | 636 | 9.729550 | TGATACTACCTCCCTAATGCATAATAT | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
650 | 673 | 8.961294 | ATTACGTAGTACTCTATTTATTGGCG | 57.039 | 34.615 | 0.00 | 0.00 | 45.76 | 5.69 |
651 | 674 | 6.624352 | ACGTAGTACTCTATTTATTGGCGA | 57.376 | 37.500 | 0.00 | 0.00 | 41.94 | 5.54 |
652 | 675 | 7.031226 | ACGTAGTACTCTATTTATTGGCGAA | 57.969 | 36.000 | 0.00 | 0.00 | 41.94 | 4.70 |
653 | 676 | 7.655490 | ACGTAGTACTCTATTTATTGGCGAAT | 58.345 | 34.615 | 0.00 | 0.00 | 41.94 | 3.34 |
654 | 677 | 7.806960 | ACGTAGTACTCTATTTATTGGCGAATC | 59.193 | 37.037 | 0.00 | 0.00 | 41.94 | 2.52 |
655 | 678 | 7.806487 | CGTAGTACTCTATTTATTGGCGAATCA | 59.194 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
656 | 679 | 9.472361 | GTAGTACTCTATTTATTGGCGAATCAA | 57.528 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
657 | 680 | 8.366671 | AGTACTCTATTTATTGGCGAATCAAC | 57.633 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
658 | 681 | 6.619801 | ACTCTATTTATTGGCGAATCAACC | 57.380 | 37.500 | 0.00 | 0.00 | 0.00 | 3.77 |
659 | 682 | 6.357367 | ACTCTATTTATTGGCGAATCAACCT | 58.643 | 36.000 | 0.00 | 0.00 | 0.00 | 3.50 |
660 | 683 | 7.506114 | ACTCTATTTATTGGCGAATCAACCTA | 58.494 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
661 | 684 | 8.157476 | ACTCTATTTATTGGCGAATCAACCTAT | 58.843 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
662 | 685 | 8.322906 | TCTATTTATTGGCGAATCAACCTATG | 57.677 | 34.615 | 0.00 | 0.00 | 0.00 | 2.23 |
663 | 686 | 5.766150 | TTTATTGGCGAATCAACCTATGG | 57.234 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
664 | 687 | 2.799126 | TTGGCGAATCAACCTATGGT | 57.201 | 45.000 | 0.00 | 0.00 | 37.65 | 3.55 |
677 | 700 | 4.569719 | ACCTATGGTTGAGTTGGTTAGG | 57.430 | 45.455 | 0.00 | 0.00 | 27.29 | 2.69 |
678 | 701 | 3.914435 | ACCTATGGTTGAGTTGGTTAGGT | 59.086 | 43.478 | 0.00 | 0.00 | 34.55 | 3.08 |
679 | 702 | 4.261801 | CCTATGGTTGAGTTGGTTAGGTG | 58.738 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
680 | 703 | 4.019681 | CCTATGGTTGAGTTGGTTAGGTGA | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
681 | 704 | 3.935818 | TGGTTGAGTTGGTTAGGTGAA | 57.064 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
682 | 705 | 3.547746 | TGGTTGAGTTGGTTAGGTGAAC | 58.452 | 45.455 | 0.00 | 0.00 | 37.31 | 3.18 |
683 | 706 | 3.054287 | TGGTTGAGTTGGTTAGGTGAACA | 60.054 | 43.478 | 0.00 | 0.00 | 40.09 | 3.18 |
684 | 707 | 3.564225 | GGTTGAGTTGGTTAGGTGAACAG | 59.436 | 47.826 | 0.00 | 0.00 | 40.09 | 3.16 |
685 | 708 | 4.196971 | GTTGAGTTGGTTAGGTGAACAGT | 58.803 | 43.478 | 0.00 | 0.00 | 40.09 | 3.55 |
686 | 709 | 3.804036 | TGAGTTGGTTAGGTGAACAGTG | 58.196 | 45.455 | 0.00 | 0.00 | 40.09 | 3.66 |
687 | 710 | 3.139077 | GAGTTGGTTAGGTGAACAGTGG | 58.861 | 50.000 | 0.00 | 0.00 | 40.09 | 4.00 |
688 | 711 | 2.508300 | AGTTGGTTAGGTGAACAGTGGT | 59.492 | 45.455 | 0.00 | 0.00 | 40.09 | 4.16 |
689 | 712 | 3.712733 | AGTTGGTTAGGTGAACAGTGGTA | 59.287 | 43.478 | 0.00 | 0.00 | 40.09 | 3.25 |
690 | 713 | 4.349930 | AGTTGGTTAGGTGAACAGTGGTAT | 59.650 | 41.667 | 0.00 | 0.00 | 40.09 | 2.73 |
691 | 714 | 4.546829 | TGGTTAGGTGAACAGTGGTATC | 57.453 | 45.455 | 0.00 | 0.00 | 40.09 | 2.24 |
692 | 715 | 3.262405 | TGGTTAGGTGAACAGTGGTATCC | 59.738 | 47.826 | 0.00 | 0.00 | 40.09 | 2.59 |
693 | 716 | 3.370209 | GGTTAGGTGAACAGTGGTATCCC | 60.370 | 52.174 | 0.00 | 0.00 | 40.09 | 3.85 |
694 | 717 | 1.286248 | AGGTGAACAGTGGTATCCCC | 58.714 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
695 | 718 | 0.988832 | GGTGAACAGTGGTATCCCCA | 59.011 | 55.000 | 0.00 | 0.00 | 42.51 | 4.96 |
696 | 719 | 7.271713 | GTTAGGTGAACAGTGGTATCCCCAA | 62.272 | 48.000 | 0.00 | 0.00 | 40.64 | 4.12 |
703 | 726 | 3.444955 | TGGTATCCCCAACCCATCA | 57.555 | 52.632 | 0.00 | 0.00 | 41.50 | 3.07 |
704 | 727 | 1.221635 | TGGTATCCCCAACCCATCAG | 58.778 | 55.000 | 0.00 | 0.00 | 41.50 | 2.90 |
705 | 728 | 0.478507 | GGTATCCCCAACCCATCAGG | 59.521 | 60.000 | 0.00 | 0.00 | 43.78 | 3.86 |
721 | 744 | 3.363787 | AGGGTTCAAATCCTGGTGC | 57.636 | 52.632 | 0.00 | 0.00 | 38.36 | 5.01 |
722 | 745 | 0.779997 | AGGGTTCAAATCCTGGTGCT | 59.220 | 50.000 | 0.00 | 0.00 | 38.36 | 4.40 |
723 | 746 | 1.177401 | GGGTTCAAATCCTGGTGCTC | 58.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
724 | 747 | 1.547675 | GGGTTCAAATCCTGGTGCTCA | 60.548 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
725 | 748 | 1.541588 | GGTTCAAATCCTGGTGCTCAC | 59.458 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
726 | 749 | 2.229792 | GTTCAAATCCTGGTGCTCACA | 58.770 | 47.619 | 2.21 | 0.00 | 0.00 | 3.58 |
727 | 750 | 2.821969 | GTTCAAATCCTGGTGCTCACAT | 59.178 | 45.455 | 2.21 | 0.00 | 0.00 | 3.21 |
728 | 751 | 3.159213 | TCAAATCCTGGTGCTCACATT | 57.841 | 42.857 | 2.21 | 0.00 | 0.00 | 2.71 |
729 | 752 | 4.299586 | TCAAATCCTGGTGCTCACATTA | 57.700 | 40.909 | 2.21 | 0.00 | 0.00 | 1.90 |
730 | 753 | 4.858850 | TCAAATCCTGGTGCTCACATTAT | 58.141 | 39.130 | 2.21 | 0.00 | 0.00 | 1.28 |
731 | 754 | 5.263599 | TCAAATCCTGGTGCTCACATTATT | 58.736 | 37.500 | 2.21 | 0.00 | 0.00 | 1.40 |
732 | 755 | 5.716228 | TCAAATCCTGGTGCTCACATTATTT | 59.284 | 36.000 | 2.21 | 0.65 | 0.00 | 1.40 |
733 | 756 | 5.841957 | AATCCTGGTGCTCACATTATTTC | 57.158 | 39.130 | 2.21 | 0.00 | 0.00 | 2.17 |
734 | 757 | 3.270027 | TCCTGGTGCTCACATTATTTCG | 58.730 | 45.455 | 2.21 | 0.00 | 0.00 | 3.46 |
735 | 758 | 2.355756 | CCTGGTGCTCACATTATTTCGG | 59.644 | 50.000 | 2.21 | 0.00 | 0.00 | 4.30 |
736 | 759 | 1.742831 | TGGTGCTCACATTATTTCGGC | 59.257 | 47.619 | 2.21 | 0.00 | 0.00 | 5.54 |
737 | 760 | 2.017049 | GGTGCTCACATTATTTCGGCT | 58.983 | 47.619 | 2.21 | 0.00 | 0.00 | 5.52 |
738 | 761 | 2.032178 | GGTGCTCACATTATTTCGGCTC | 59.968 | 50.000 | 2.21 | 0.00 | 0.00 | 4.70 |
739 | 762 | 2.677836 | GTGCTCACATTATTTCGGCTCA | 59.322 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
740 | 763 | 3.126858 | GTGCTCACATTATTTCGGCTCAA | 59.873 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
741 | 764 | 3.374988 | TGCTCACATTATTTCGGCTCAAG | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
742 | 765 | 3.623060 | GCTCACATTATTTCGGCTCAAGA | 59.377 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
743 | 766 | 4.274459 | GCTCACATTATTTCGGCTCAAGAT | 59.726 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
744 | 767 | 5.739752 | TCACATTATTTCGGCTCAAGATG | 57.260 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
745 | 768 | 5.427378 | TCACATTATTTCGGCTCAAGATGA | 58.573 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
746 | 769 | 6.057533 | TCACATTATTTCGGCTCAAGATGAT | 58.942 | 36.000 | 0.00 | 0.00 | 0.00 | 2.45 |
747 | 770 | 7.216494 | TCACATTATTTCGGCTCAAGATGATA | 58.784 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
748 | 771 | 7.879677 | TCACATTATTTCGGCTCAAGATGATAT | 59.120 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
749 | 772 | 7.961283 | CACATTATTTCGGCTCAAGATGATATG | 59.039 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
750 | 773 | 6.486253 | TTATTTCGGCTCAAGATGATATGC | 57.514 | 37.500 | 0.00 | 0.00 | 0.00 | 3.14 |
751 | 774 | 2.462456 | TCGGCTCAAGATGATATGCC | 57.538 | 50.000 | 0.00 | 0.00 | 33.41 | 4.40 |
752 | 775 | 1.073964 | CGGCTCAAGATGATATGCCG | 58.926 | 55.000 | 14.38 | 14.38 | 46.82 | 5.69 |
753 | 776 | 1.446907 | GGCTCAAGATGATATGCCGG | 58.553 | 55.000 | 0.00 | 0.00 | 27.86 | 6.13 |
754 | 777 | 0.801251 | GCTCAAGATGATATGCCGGC | 59.199 | 55.000 | 22.73 | 22.73 | 0.00 | 6.13 |
755 | 778 | 1.610102 | GCTCAAGATGATATGCCGGCT | 60.610 | 52.381 | 29.70 | 15.76 | 0.00 | 5.52 |
756 | 779 | 2.344950 | CTCAAGATGATATGCCGGCTC | 58.655 | 52.381 | 29.70 | 17.89 | 0.00 | 4.70 |
757 | 780 | 1.693606 | TCAAGATGATATGCCGGCTCA | 59.306 | 47.619 | 29.70 | 23.34 | 0.00 | 4.26 |
758 | 781 | 2.074576 | CAAGATGATATGCCGGCTCAG | 58.925 | 52.381 | 29.70 | 7.35 | 0.00 | 3.35 |
759 | 782 | 1.346062 | AGATGATATGCCGGCTCAGT | 58.654 | 50.000 | 29.70 | 13.44 | 0.00 | 3.41 |
760 | 783 | 1.274728 | AGATGATATGCCGGCTCAGTC | 59.725 | 52.381 | 29.70 | 19.55 | 0.00 | 3.51 |
761 | 784 | 1.274728 | GATGATATGCCGGCTCAGTCT | 59.725 | 52.381 | 29.70 | 8.26 | 0.00 | 3.24 |
762 | 785 | 0.676184 | TGATATGCCGGCTCAGTCTC | 59.324 | 55.000 | 29.70 | 15.31 | 0.00 | 3.36 |
763 | 786 | 0.965439 | GATATGCCGGCTCAGTCTCT | 59.035 | 55.000 | 29.70 | 3.16 | 0.00 | 3.10 |
764 | 787 | 0.965439 | ATATGCCGGCTCAGTCTCTC | 59.035 | 55.000 | 29.70 | 0.00 | 0.00 | 3.20 |
765 | 788 | 1.448119 | TATGCCGGCTCAGTCTCTCG | 61.448 | 60.000 | 29.70 | 0.00 | 0.00 | 4.04 |
766 | 789 | 4.200283 | GCCGGCTCAGTCTCTCGG | 62.200 | 72.222 | 22.15 | 0.00 | 43.13 | 4.63 |
767 | 790 | 2.438614 | CCGGCTCAGTCTCTCGGA | 60.439 | 66.667 | 0.00 | 0.00 | 42.94 | 4.55 |
768 | 791 | 2.477176 | CCGGCTCAGTCTCTCGGAG | 61.477 | 68.421 | 0.00 | 0.00 | 42.94 | 4.63 |
769 | 792 | 2.477176 | CGGCTCAGTCTCTCGGAGG | 61.477 | 68.421 | 4.96 | 0.00 | 38.48 | 4.30 |
770 | 793 | 1.379309 | GGCTCAGTCTCTCGGAGGT | 60.379 | 63.158 | 4.96 | 0.00 | 38.48 | 3.85 |
771 | 794 | 1.662438 | GGCTCAGTCTCTCGGAGGTG | 61.662 | 65.000 | 4.96 | 0.00 | 38.48 | 4.00 |
772 | 795 | 1.806568 | CTCAGTCTCTCGGAGGTGC | 59.193 | 63.158 | 4.96 | 0.00 | 35.32 | 5.01 |
773 | 796 | 0.679640 | CTCAGTCTCTCGGAGGTGCT | 60.680 | 60.000 | 4.96 | 0.00 | 35.32 | 4.40 |
774 | 797 | 0.678366 | TCAGTCTCTCGGAGGTGCTC | 60.678 | 60.000 | 4.96 | 0.00 | 0.00 | 4.26 |
775 | 798 | 0.962855 | CAGTCTCTCGGAGGTGCTCA | 60.963 | 60.000 | 4.96 | 0.00 | 31.08 | 4.26 |
776 | 799 | 0.033601 | AGTCTCTCGGAGGTGCTCAT | 60.034 | 55.000 | 4.96 | 0.00 | 31.08 | 2.90 |
777 | 800 | 1.213182 | AGTCTCTCGGAGGTGCTCATA | 59.787 | 52.381 | 4.96 | 0.00 | 31.08 | 2.15 |
778 | 801 | 2.025155 | GTCTCTCGGAGGTGCTCATAA | 58.975 | 52.381 | 4.96 | 0.00 | 31.08 | 1.90 |
779 | 802 | 2.034053 | GTCTCTCGGAGGTGCTCATAAG | 59.966 | 54.545 | 4.96 | 0.00 | 31.08 | 1.73 |
780 | 803 | 1.339610 | CTCTCGGAGGTGCTCATAAGG | 59.660 | 57.143 | 4.96 | 0.00 | 31.08 | 2.69 |
781 | 804 | 0.390860 | CTCGGAGGTGCTCATAAGGG | 59.609 | 60.000 | 0.00 | 0.00 | 31.08 | 3.95 |
782 | 805 | 0.325296 | TCGGAGGTGCTCATAAGGGT | 60.325 | 55.000 | 0.00 | 0.00 | 31.08 | 4.34 |
783 | 806 | 1.063492 | TCGGAGGTGCTCATAAGGGTA | 60.063 | 52.381 | 0.00 | 0.00 | 31.08 | 3.69 |
784 | 807 | 1.341531 | CGGAGGTGCTCATAAGGGTAG | 59.658 | 57.143 | 0.00 | 0.00 | 31.08 | 3.18 |
785 | 808 | 1.694696 | GGAGGTGCTCATAAGGGTAGG | 59.305 | 57.143 | 0.00 | 0.00 | 31.08 | 3.18 |
786 | 809 | 1.694696 | GAGGTGCTCATAAGGGTAGGG | 59.305 | 57.143 | 0.00 | 0.00 | 0.00 | 3.53 |
787 | 810 | 1.009675 | AGGTGCTCATAAGGGTAGGGT | 59.990 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
788 | 811 | 1.141053 | GGTGCTCATAAGGGTAGGGTG | 59.859 | 57.143 | 0.00 | 0.00 | 0.00 | 4.61 |
789 | 812 | 2.116238 | GTGCTCATAAGGGTAGGGTGA | 58.884 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
790 | 813 | 2.706190 | GTGCTCATAAGGGTAGGGTGAT | 59.294 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
791 | 814 | 2.705658 | TGCTCATAAGGGTAGGGTGATG | 59.294 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
792 | 815 | 2.551071 | GCTCATAAGGGTAGGGTGATGC | 60.551 | 54.545 | 0.00 | 0.00 | 0.00 | 3.91 |
793 | 816 | 1.691976 | TCATAAGGGTAGGGTGATGCG | 59.308 | 52.381 | 0.00 | 0.00 | 0.00 | 4.73 |
794 | 817 | 1.056660 | ATAAGGGTAGGGTGATGCGG | 58.943 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
795 | 818 | 0.325860 | TAAGGGTAGGGTGATGCGGT | 60.326 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
796 | 819 | 0.325860 | AAGGGTAGGGTGATGCGGTA | 60.326 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
797 | 820 | 0.105142 | AGGGTAGGGTGATGCGGTAT | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
798 | 821 | 0.320697 | GGGTAGGGTGATGCGGTATC | 59.679 | 60.000 | 0.00 | 0.00 | 36.29 | 2.24 |
799 | 822 | 1.045407 | GGTAGGGTGATGCGGTATCA | 58.955 | 55.000 | 4.56 | 4.56 | 43.40 | 2.15 |
800 | 823 | 1.623811 | GGTAGGGTGATGCGGTATCAT | 59.376 | 52.381 | 11.91 | 0.00 | 46.85 | 2.45 |
801 | 824 | 2.612972 | GGTAGGGTGATGCGGTATCATG | 60.613 | 54.545 | 11.91 | 0.00 | 46.85 | 3.07 |
802 | 825 | 1.423584 | AGGGTGATGCGGTATCATGA | 58.576 | 50.000 | 11.91 | 0.00 | 46.85 | 3.07 |
803 | 826 | 1.980765 | AGGGTGATGCGGTATCATGAT | 59.019 | 47.619 | 13.81 | 13.81 | 46.85 | 2.45 |
804 | 827 | 3.173151 | AGGGTGATGCGGTATCATGATA | 58.827 | 45.455 | 11.49 | 11.49 | 46.85 | 2.15 |
805 | 828 | 3.776969 | AGGGTGATGCGGTATCATGATAT | 59.223 | 43.478 | 18.18 | 3.14 | 46.85 | 1.63 |
806 | 829 | 3.873361 | GGGTGATGCGGTATCATGATATG | 59.127 | 47.826 | 18.18 | 14.40 | 46.85 | 1.78 |
807 | 830 | 4.383010 | GGGTGATGCGGTATCATGATATGA | 60.383 | 45.833 | 18.18 | 3.96 | 46.85 | 2.15 |
861 | 884 | 9.295825 | TGTTATGACACCTCATTAAAATTGTCT | 57.704 | 29.630 | 0.00 | 0.00 | 38.21 | 3.41 |
865 | 888 | 8.918202 | TGACACCTCATTAAAATTGTCTAGTT | 57.082 | 30.769 | 0.00 | 0.00 | 35.45 | 2.24 |
866 | 889 | 8.783093 | TGACACCTCATTAAAATTGTCTAGTTG | 58.217 | 33.333 | 0.00 | 0.00 | 35.45 | 3.16 |
867 | 890 | 8.918202 | ACACCTCATTAAAATTGTCTAGTTGA | 57.082 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
868 | 891 | 8.784043 | ACACCTCATTAAAATTGTCTAGTTGAC | 58.216 | 33.333 | 0.00 | 0.00 | 45.54 | 3.18 |
882 | 905 | 7.865875 | GTCTAGTTGACATGCATGATACTAG | 57.134 | 40.000 | 32.80 | 32.80 | 44.73 | 2.57 |
883 | 906 | 6.364706 | GTCTAGTTGACATGCATGATACTAGC | 59.635 | 42.308 | 33.22 | 28.26 | 44.73 | 3.42 |
884 | 907 | 5.287674 | AGTTGACATGCATGATACTAGCT | 57.712 | 39.130 | 32.75 | 16.16 | 0.00 | 3.32 |
885 | 908 | 6.410942 | AGTTGACATGCATGATACTAGCTA | 57.589 | 37.500 | 32.75 | 7.07 | 0.00 | 3.32 |
886 | 909 | 7.002250 | AGTTGACATGCATGATACTAGCTAT | 57.998 | 36.000 | 32.75 | 6.24 | 0.00 | 2.97 |
887 | 910 | 6.872547 | AGTTGACATGCATGATACTAGCTATG | 59.127 | 38.462 | 32.75 | 3.42 | 0.00 | 2.23 |
888 | 911 | 6.594788 | TGACATGCATGATACTAGCTATGA | 57.405 | 37.500 | 32.75 | 0.00 | 0.00 | 2.15 |
889 | 912 | 7.179076 | TGACATGCATGATACTAGCTATGAT | 57.821 | 36.000 | 32.75 | 4.97 | 0.00 | 2.45 |
890 | 913 | 8.297470 | TGACATGCATGATACTAGCTATGATA | 57.703 | 34.615 | 32.75 | 2.03 | 0.00 | 2.15 |
891 | 914 | 8.193438 | TGACATGCATGATACTAGCTATGATAC | 58.807 | 37.037 | 32.75 | 1.74 | 0.00 | 2.24 |
892 | 915 | 8.303780 | ACATGCATGATACTAGCTATGATACT | 57.696 | 34.615 | 32.75 | 0.57 | 0.00 | 2.12 |
893 | 916 | 9.413734 | ACATGCATGATACTAGCTATGATACTA | 57.586 | 33.333 | 32.75 | 0.00 | 0.00 | 1.82 |
894 | 917 | 9.676195 | CATGCATGATACTAGCTATGATACTAC | 57.324 | 37.037 | 22.59 | 0.00 | 0.00 | 2.73 |
895 | 918 | 8.226819 | TGCATGATACTAGCTATGATACTACC | 57.773 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
896 | 919 | 7.834181 | TGCATGATACTAGCTATGATACTACCA | 59.166 | 37.037 | 0.00 | 0.00 | 0.00 | 3.25 |
897 | 920 | 8.855110 | GCATGATACTAGCTATGATACTACCAT | 58.145 | 37.037 | 0.00 | 0.00 | 0.00 | 3.55 |
903 | 926 | 8.266392 | ACTAGCTATGATACTACCATTACGAC | 57.734 | 38.462 | 0.00 | 0.00 | 0.00 | 4.34 |
904 | 927 | 6.512342 | AGCTATGATACTACCATTACGACC | 57.488 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
905 | 928 | 5.123502 | AGCTATGATACTACCATTACGACCG | 59.876 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
906 | 929 | 4.778534 | ATGATACTACCATTACGACCGG | 57.221 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
907 | 930 | 2.294233 | TGATACTACCATTACGACCGGC | 59.706 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
918 | 941 | 4.942761 | TTACGACCGGCCTAATAAAGAT | 57.057 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
921 | 944 | 3.133362 | ACGACCGGCCTAATAAAGATTGA | 59.867 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
949 | 972 | 5.066764 | CGTCCCTTTGAAAAACAAGGTTCTA | 59.933 | 40.000 | 0.00 | 0.00 | 39.77 | 2.10 |
952 | 975 | 5.289595 | CCTTTGAAAAACAAGGTTCTAGCC | 58.710 | 41.667 | 0.00 | 0.00 | 39.77 | 3.93 |
1012 | 1035 | 8.324163 | AGACAACATTTACACACTAGAATTCC | 57.676 | 34.615 | 0.65 | 0.00 | 0.00 | 3.01 |
1018 | 1041 | 9.003658 | ACATTTACACACTAGAATTCCTTCAAG | 57.996 | 33.333 | 0.65 | 0.00 | 33.56 | 3.02 |
1036 | 1059 | 7.774625 | TCCTTCAAGAAAAATTCCAAATGCTTT | 59.225 | 29.630 | 0.00 | 0.00 | 0.00 | 3.51 |
1038 | 1061 | 9.442033 | CTTCAAGAAAAATTCCAAATGCTTTTC | 57.558 | 29.630 | 0.00 | 0.00 | 36.63 | 2.29 |
1042 | 1065 | 7.056006 | AGAAAAATTCCAAATGCTTTTCTGGT | 58.944 | 30.769 | 7.17 | 0.00 | 42.06 | 4.00 |
1049 | 1072 | 7.784633 | TCCAAATGCTTTTCTGGTTAAAAAG | 57.215 | 32.000 | 4.41 | 4.41 | 43.44 | 2.27 |
1050 | 1073 | 7.334858 | TCCAAATGCTTTTCTGGTTAAAAAGT | 58.665 | 30.769 | 9.36 | 0.00 | 42.84 | 2.66 |
1113 | 1143 | 5.888691 | TGTTTGTACGCCATCAAATGTAT | 57.111 | 34.783 | 0.00 | 0.00 | 36.25 | 2.29 |
1210 | 1616 | 2.283298 | ACCATGTTCTGCGCTAATCAG | 58.717 | 47.619 | 9.73 | 0.00 | 0.00 | 2.90 |
1221 | 1627 | 6.283694 | TCTGCGCTAATCAGTCAAATCTTAT | 58.716 | 36.000 | 9.73 | 0.00 | 33.48 | 1.73 |
1329 | 1745 | 5.963253 | ACCCATACCCAATCAAATCAAATCA | 59.037 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1341 | 1758 | 6.393990 | TCAAATCAAATCATACCAAAACCCG | 58.606 | 36.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1350 | 1767 | 6.057321 | TCATACCAAAACCCGACTAAATCT | 57.943 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
1356 | 1773 | 8.866970 | ACCAAAACCCGACTAAATCTAAATTA | 57.133 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
1373 | 1790 | 0.037590 | TTATGTTGCCTTCCCGCACT | 59.962 | 50.000 | 0.00 | 0.00 | 38.83 | 4.40 |
1460 | 1879 | 4.193090 | CACTAAACATGTATGCCCCGTTA | 58.807 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
1477 | 1896 | 8.735315 | TGCCCCGTTACATGATTAATTATTATG | 58.265 | 33.333 | 0.00 | 0.00 | 36.55 | 1.90 |
1478 | 1897 | 8.952278 | GCCCCGTTACATGATTAATTATTATGA | 58.048 | 33.333 | 0.00 | 0.00 | 34.68 | 2.15 |
1700 | 2123 | 3.987404 | GCCCGAAGCAATGTCACT | 58.013 | 55.556 | 0.00 | 0.00 | 42.97 | 3.41 |
1701 | 2124 | 1.796796 | GCCCGAAGCAATGTCACTC | 59.203 | 57.895 | 0.00 | 0.00 | 42.97 | 3.51 |
1750 | 2173 | 3.772522 | GCGTATAAGCCGAAGAATGTC | 57.227 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
1751 | 2174 | 2.153247 | GCGTATAAGCCGAAGAATGTCG | 59.847 | 50.000 | 0.00 | 0.00 | 40.77 | 4.35 |
1752 | 2175 | 3.624900 | CGTATAAGCCGAAGAATGTCGA | 58.375 | 45.455 | 0.00 | 0.00 | 43.86 | 4.20 |
1753 | 2176 | 3.664486 | CGTATAAGCCGAAGAATGTCGAG | 59.336 | 47.826 | 0.00 | 0.00 | 43.86 | 4.04 |
1754 | 2177 | 1.922570 | TAAGCCGAAGAATGTCGAGC | 58.077 | 50.000 | 0.00 | 0.00 | 43.86 | 5.03 |
1755 | 2178 | 0.037326 | AAGCCGAAGAATGTCGAGCA | 60.037 | 50.000 | 9.54 | 0.00 | 43.86 | 4.26 |
1756 | 2179 | 0.737715 | AGCCGAAGAATGTCGAGCAC | 60.738 | 55.000 | 9.54 | 0.00 | 43.86 | 4.40 |
1757 | 2180 | 1.014044 | GCCGAAGAATGTCGAGCACA | 61.014 | 55.000 | 0.00 | 0.00 | 43.86 | 4.57 |
1758 | 2181 | 0.994995 | CCGAAGAATGTCGAGCACAG | 59.005 | 55.000 | 0.00 | 0.00 | 43.86 | 3.66 |
1759 | 2182 | 0.368227 | CGAAGAATGTCGAGCACAGC | 59.632 | 55.000 | 0.00 | 0.00 | 43.86 | 4.40 |
1760 | 2183 | 0.723981 | GAAGAATGTCGAGCACAGCC | 59.276 | 55.000 | 0.00 | 0.00 | 38.85 | 4.85 |
1761 | 2184 | 0.674895 | AAGAATGTCGAGCACAGCCC | 60.675 | 55.000 | 0.00 | 0.00 | 38.85 | 5.19 |
1762 | 2185 | 1.375908 | GAATGTCGAGCACAGCCCA | 60.376 | 57.895 | 0.00 | 0.00 | 38.85 | 5.36 |
1763 | 2186 | 1.364626 | GAATGTCGAGCACAGCCCAG | 61.365 | 60.000 | 0.00 | 0.00 | 38.85 | 4.45 |
1764 | 2187 | 3.965539 | ATGTCGAGCACAGCCCAGC | 62.966 | 63.158 | 0.00 | 0.00 | 38.85 | 4.85 |
1765 | 2188 | 4.687215 | GTCGAGCACAGCCCAGCA | 62.687 | 66.667 | 0.00 | 0.00 | 0.00 | 4.41 |
1766 | 2189 | 4.383861 | TCGAGCACAGCCCAGCAG | 62.384 | 66.667 | 0.00 | 0.00 | 0.00 | 4.24 |
1786 | 2209 | 4.286320 | GCCGCTGGATCCGTCGAT | 62.286 | 66.667 | 22.25 | 0.00 | 0.00 | 3.59 |
1787 | 2210 | 2.049985 | CCGCTGGATCCGTCGATC | 60.050 | 66.667 | 22.25 | 0.00 | 43.73 | 3.69 |
1788 | 2211 | 2.427575 | CGCTGGATCCGTCGATCG | 60.428 | 66.667 | 17.46 | 9.36 | 45.16 | 3.69 |
1789 | 2212 | 2.722487 | GCTGGATCCGTCGATCGT | 59.278 | 61.111 | 15.94 | 0.00 | 45.16 | 3.73 |
1790 | 2213 | 1.658717 | GCTGGATCCGTCGATCGTG | 60.659 | 63.158 | 15.94 | 9.00 | 45.16 | 4.35 |
1791 | 2214 | 1.658717 | CTGGATCCGTCGATCGTGC | 60.659 | 63.158 | 15.94 | 8.58 | 45.16 | 5.34 |
1792 | 2215 | 2.336400 | CTGGATCCGTCGATCGTGCA | 62.336 | 60.000 | 15.94 | 5.85 | 45.16 | 4.57 |
1793 | 2216 | 1.658717 | GGATCCGTCGATCGTGCAG | 60.659 | 63.158 | 15.94 | 5.07 | 45.16 | 4.41 |
1794 | 2217 | 1.064296 | GATCCGTCGATCGTGCAGT | 59.936 | 57.895 | 15.94 | 0.00 | 35.83 | 4.40 |
1795 | 2218 | 0.525668 | GATCCGTCGATCGTGCAGTT | 60.526 | 55.000 | 15.94 | 0.00 | 35.83 | 3.16 |
1796 | 2219 | 0.736636 | ATCCGTCGATCGTGCAGTTA | 59.263 | 50.000 | 15.94 | 0.00 | 37.94 | 2.24 |
1797 | 2220 | 0.736636 | TCCGTCGATCGTGCAGTTAT | 59.263 | 50.000 | 15.94 | 0.00 | 37.94 | 1.89 |
1798 | 2221 | 1.121240 | CCGTCGATCGTGCAGTTATC | 58.879 | 55.000 | 15.94 | 0.00 | 37.94 | 1.75 |
1799 | 2222 | 0.764801 | CGTCGATCGTGCAGTTATCG | 59.235 | 55.000 | 15.94 | 15.56 | 42.90 | 2.92 |
1800 | 2223 | 1.823828 | GTCGATCGTGCAGTTATCGT | 58.176 | 50.000 | 15.94 | 0.00 | 42.32 | 3.73 |
1801 | 2224 | 1.774085 | GTCGATCGTGCAGTTATCGTC | 59.226 | 52.381 | 15.94 | 13.01 | 42.32 | 4.20 |
1802 | 2225 | 1.121240 | CGATCGTGCAGTTATCGTCC | 58.879 | 55.000 | 7.03 | 0.00 | 38.12 | 4.79 |
1803 | 2226 | 1.533129 | CGATCGTGCAGTTATCGTCCA | 60.533 | 52.381 | 7.03 | 0.00 | 38.12 | 4.02 |
1804 | 2227 | 2.536365 | GATCGTGCAGTTATCGTCCAA | 58.464 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
1805 | 2228 | 2.442212 | TCGTGCAGTTATCGTCCAAA | 57.558 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1806 | 2229 | 2.063266 | TCGTGCAGTTATCGTCCAAAC | 58.937 | 47.619 | 0.00 | 0.00 | 0.00 | 2.93 |
1807 | 2230 | 1.795872 | CGTGCAGTTATCGTCCAAACA | 59.204 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
1808 | 2231 | 2.411031 | CGTGCAGTTATCGTCCAAACAC | 60.411 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1809 | 2232 | 2.806244 | GTGCAGTTATCGTCCAAACACT | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
1810 | 2233 | 2.805671 | TGCAGTTATCGTCCAAACACTG | 59.194 | 45.455 | 0.00 | 0.00 | 35.71 | 3.66 |
1811 | 2234 | 2.806244 | GCAGTTATCGTCCAAACACTGT | 59.194 | 45.455 | 0.00 | 0.00 | 35.17 | 3.55 |
1812 | 2235 | 3.120649 | GCAGTTATCGTCCAAACACTGTC | 60.121 | 47.826 | 0.00 | 0.00 | 35.17 | 3.51 |
1813 | 2236 | 3.121279 | CAGTTATCGTCCAAACACTGTCG | 59.879 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
1814 | 2237 | 3.054878 | GTTATCGTCCAAACACTGTCGT | 58.945 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
1815 | 2238 | 1.497991 | ATCGTCCAAACACTGTCGTG | 58.502 | 50.000 | 0.00 | 0.00 | 46.63 | 4.35 |
1824 | 2247 | 2.676744 | CACTGTCGTGTGTGAAGCA | 58.323 | 52.632 | 0.00 | 0.00 | 36.38 | 3.91 |
1825 | 2248 | 1.220529 | CACTGTCGTGTGTGAAGCAT | 58.779 | 50.000 | 0.00 | 0.00 | 36.38 | 3.79 |
1826 | 2249 | 1.599071 | CACTGTCGTGTGTGAAGCATT | 59.401 | 47.619 | 0.00 | 0.00 | 36.38 | 3.56 |
1827 | 2250 | 2.032054 | CACTGTCGTGTGTGAAGCATTT | 59.968 | 45.455 | 0.00 | 0.00 | 36.38 | 2.32 |
1828 | 2251 | 2.682856 | ACTGTCGTGTGTGAAGCATTTT | 59.317 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
1829 | 2252 | 3.242739 | ACTGTCGTGTGTGAAGCATTTTC | 60.243 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
1830 | 2253 | 2.286125 | TGTCGTGTGTGAAGCATTTTCG | 60.286 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
1831 | 2254 | 2.033236 | GTCGTGTGTGAAGCATTTTCGA | 60.033 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
1832 | 2255 | 2.609916 | TCGTGTGTGAAGCATTTTCGAA | 59.390 | 40.909 | 0.00 | 0.00 | 0.00 | 3.71 |
2217 | 2640 | 2.874701 | CAGGACAAGGCATACATACAGC | 59.125 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2218 | 2641 | 1.867233 | GGACAAGGCATACATACAGCG | 59.133 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
2219 | 2642 | 1.867233 | GACAAGGCATACATACAGCGG | 59.133 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
2221 | 2644 | 0.535102 | AAGGCATACATACAGCGGCC | 60.535 | 55.000 | 0.00 | 0.00 | 41.65 | 6.13 |
2518 | 2944 | 4.430423 | CCGCTGTCGCTTTCGTGC | 62.430 | 66.667 | 0.00 | 0.00 | 36.96 | 5.34 |
2704 | 3131 | 1.339610 | CAGTAAGCCTCTCCTCATCCG | 59.660 | 57.143 | 0.00 | 0.00 | 0.00 | 4.18 |
2762 | 3201 | 3.213206 | TGTCTCATTGCAACCTGAACT | 57.787 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
2763 | 3202 | 3.554934 | TGTCTCATTGCAACCTGAACTT | 58.445 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
2764 | 3203 | 3.565482 | TGTCTCATTGCAACCTGAACTTC | 59.435 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
2765 | 3204 | 3.817647 | GTCTCATTGCAACCTGAACTTCT | 59.182 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
2926 | 3365 | 8.702163 | ATAACATTTTTCGGATTCAATTGTCC | 57.298 | 30.769 | 5.13 | 5.19 | 0.00 | 4.02 |
2927 | 3366 | 6.095432 | ACATTTTTCGGATTCAATTGTCCA | 57.905 | 33.333 | 13.80 | 1.14 | 34.05 | 4.02 |
2968 | 3407 | 0.534877 | TGTGTGCGCCTCTTTGATGT | 60.535 | 50.000 | 4.18 | 0.00 | 0.00 | 3.06 |
2969 | 3408 | 0.593128 | GTGTGCGCCTCTTTGATGTT | 59.407 | 50.000 | 4.18 | 0.00 | 0.00 | 2.71 |
2970 | 3409 | 1.001378 | GTGTGCGCCTCTTTGATGTTT | 60.001 | 47.619 | 4.18 | 0.00 | 0.00 | 2.83 |
3127 | 3566 | 1.675310 | CGGTGGAGCAGATTTGGCA | 60.675 | 57.895 | 0.00 | 0.00 | 0.00 | 4.92 |
3128 | 3567 | 1.651240 | CGGTGGAGCAGATTTGGCAG | 61.651 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3168 | 3607 | 2.346529 | AGCTCCCATGCTATCTCCATT | 58.653 | 47.619 | 0.00 | 0.00 | 42.10 | 3.16 |
3169 | 3608 | 2.305343 | AGCTCCCATGCTATCTCCATTC | 59.695 | 50.000 | 0.00 | 0.00 | 42.10 | 2.67 |
3172 | 3611 | 1.349026 | CCCATGCTATCTCCATTCGGT | 59.651 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
3174 | 3613 | 2.810274 | CCATGCTATCTCCATTCGGTTG | 59.190 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3361 | 3800 | 2.011122 | ATCGGATCCCTCACGGTAAT | 57.989 | 50.000 | 6.06 | 0.00 | 0.00 | 1.89 |
3517 | 3959 | 1.022982 | GCGTAAACCAGGCTGGGTAC | 61.023 | 60.000 | 35.34 | 30.66 | 35.52 | 3.34 |
3580 | 4022 | 8.764558 | TGCTTAATCATCCAGTTAGTTTACCTA | 58.235 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
3610 | 4052 | 5.591877 | GGTACTTCATTGCCTGATCTTGATT | 59.408 | 40.000 | 0.00 | 0.00 | 32.72 | 2.57 |
3894 | 4336 | 0.620556 | TCAGGCATTCTTGACCCCTC | 59.379 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4032 | 4474 | 4.406456 | TGTGCTACATTCCACCAAAGAAT | 58.594 | 39.130 | 0.00 | 0.00 | 34.25 | 2.40 |
4289 | 4734 | 6.752815 | CAGGACTACTTCGTCTAGAAAATTCC | 59.247 | 42.308 | 0.00 | 0.00 | 38.57 | 3.01 |
4332 | 4777 | 4.355720 | TGCCAGCCAGCCTCAAGG | 62.356 | 66.667 | 0.00 | 0.00 | 38.53 | 3.61 |
4353 | 4798 | 0.393537 | CTTCATGTGGAGAGGGTGGC | 60.394 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4378 | 4823 | 1.679559 | GGGCCTGTTACGGACGGTAT | 61.680 | 60.000 | 0.84 | 0.00 | 30.57 | 2.73 |
4379 | 4824 | 0.176449 | GGCCTGTTACGGACGGTATT | 59.824 | 55.000 | 0.00 | 0.00 | 32.41 | 1.89 |
4380 | 4825 | 1.408702 | GGCCTGTTACGGACGGTATTA | 59.591 | 52.381 | 0.00 | 0.00 | 32.41 | 0.98 |
4381 | 4826 | 2.159114 | GGCCTGTTACGGACGGTATTAA | 60.159 | 50.000 | 0.00 | 0.00 | 32.41 | 1.40 |
4508 | 4958 | 0.753867 | TGTGGACTGTAGAAACCGCA | 59.246 | 50.000 | 0.00 | 0.00 | 39.98 | 5.69 |
4513 | 4963 | 0.105408 | ACTGTAGAAACCGCACCGTT | 59.895 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
4600 | 5051 | 3.696548 | TGTGAATACCAAAGCACACAACA | 59.303 | 39.130 | 0.00 | 0.00 | 36.44 | 3.33 |
4706 | 5157 | 4.390603 | GCATTGTACACTCCGTTGATTGTA | 59.609 | 41.667 | 0.00 | 0.00 | 36.05 | 2.41 |
4730 | 5181 | 2.205022 | TGGAGAAGCAATTCCACCTG | 57.795 | 50.000 | 0.00 | 0.00 | 38.53 | 4.00 |
4744 | 5196 | 3.001514 | CCTGGGTGGTCATCCTGG | 58.998 | 66.667 | 11.03 | 11.03 | 43.03 | 4.45 |
4749 | 5201 | 0.611896 | GGGTGGTCATCCTGGTTTGG | 60.612 | 60.000 | 0.00 | 0.00 | 34.23 | 3.28 |
4788 | 5240 | 2.104967 | CTCTGTTGGGTCATACCGGTA | 58.895 | 52.381 | 18.46 | 18.46 | 39.83 | 4.02 |
4789 | 5241 | 2.498481 | CTCTGTTGGGTCATACCGGTAA | 59.502 | 50.000 | 20.22 | 0.00 | 39.83 | 2.85 |
4856 | 5309 | 5.129980 | TGTTGAGATCCTCTGCAGATTGTAT | 59.870 | 40.000 | 18.63 | 8.33 | 0.00 | 2.29 |
4858 | 5311 | 4.897670 | TGAGATCCTCTGCAGATTGTATGA | 59.102 | 41.667 | 18.63 | 7.66 | 0.00 | 2.15 |
4861 | 5314 | 3.736720 | TCCTCTGCAGATTGTATGATGC | 58.263 | 45.455 | 18.63 | 0.00 | 39.14 | 3.91 |
4911 | 5364 | 1.270785 | CCACATGGCAGTGACTGTACA | 60.271 | 52.381 | 14.82 | 13.73 | 42.05 | 2.90 |
4912 | 5365 | 2.493035 | CACATGGCAGTGACTGTACAA | 58.507 | 47.619 | 14.82 | 0.00 | 42.05 | 2.41 |
4917 | 5370 | 2.103941 | TGGCAGTGACTGTACAACATGA | 59.896 | 45.455 | 14.82 | 0.00 | 33.43 | 3.07 |
4918 | 5371 | 2.480419 | GGCAGTGACTGTACAACATGAC | 59.520 | 50.000 | 14.82 | 0.75 | 33.43 | 3.06 |
4929 | 5382 | 2.050144 | ACAACATGACACTCCCTCTGT | 58.950 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
4931 | 5384 | 3.646162 | ACAACATGACACTCCCTCTGTAA | 59.354 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
4933 | 5386 | 4.543590 | ACATGACACTCCCTCTGTAAAG | 57.456 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
4934 | 5387 | 4.160329 | ACATGACACTCCCTCTGTAAAGA | 58.840 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
4935 | 5388 | 4.593206 | ACATGACACTCCCTCTGTAAAGAA | 59.407 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
4936 | 5389 | 5.071788 | ACATGACACTCCCTCTGTAAAGAAA | 59.928 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4937 | 5390 | 5.825593 | TGACACTCCCTCTGTAAAGAAAT | 57.174 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
4938 | 5391 | 6.928348 | TGACACTCCCTCTGTAAAGAAATA | 57.072 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
4939 | 5392 | 7.496346 | TGACACTCCCTCTGTAAAGAAATAT | 57.504 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
4940 | 5393 | 8.603898 | TGACACTCCCTCTGTAAAGAAATATA | 57.396 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
4941 | 5394 | 9.042450 | TGACACTCCCTCTGTAAAGAAATATAA | 57.958 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
4942 | 5395 | 9.535878 | GACACTCCCTCTGTAAAGAAATATAAG | 57.464 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
4943 | 5396 | 9.268282 | ACACTCCCTCTGTAAAGAAATATAAGA | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
4944 | 5397 | 9.757227 | CACTCCCTCTGTAAAGAAATATAAGAG | 57.243 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
4945 | 5398 | 8.425703 | ACTCCCTCTGTAAAGAAATATAAGAGC | 58.574 | 37.037 | 0.00 | 0.00 | 0.00 | 4.09 |
4946 | 5399 | 8.554490 | TCCCTCTGTAAAGAAATATAAGAGCT | 57.446 | 34.615 | 0.00 | 0.00 | 0.00 | 4.09 |
4947 | 5400 | 8.993424 | TCCCTCTGTAAAGAAATATAAGAGCTT | 58.007 | 33.333 | 0.00 | 0.00 | 0.00 | 3.74 |
4948 | 5401 | 9.620259 | CCCTCTGTAAAGAAATATAAGAGCTTT | 57.380 | 33.333 | 0.00 | 0.00 | 33.76 | 3.51 |
4962 | 5415 | 7.719871 | ATAAGAGCTTTAGACCACTACTTCA | 57.280 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4963 | 5416 | 5.652994 | AGAGCTTTAGACCACTACTTCAG | 57.347 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4976 | 5429 | 7.527796 | ACCACTACTTCAGATATAAGAGCCTA | 58.472 | 38.462 | 0.00 | 0.00 | 0.00 | 3.93 |
5031 | 5484 | 8.980596 | TCTTATATTTGTTTACGGAGGGAGTAA | 58.019 | 33.333 | 0.00 | 0.00 | 32.84 | 2.24 |
5106 | 5559 | 9.581099 | GTTGAATAAGTTTTGAGTTTTTCCTCA | 57.419 | 29.630 | 0.00 | 0.00 | 39.65 | 3.86 |
5113 | 5566 | 5.356882 | TTTGAGTTTTTCCTCATAGCGTG | 57.643 | 39.130 | 0.00 | 0.00 | 40.96 | 5.34 |
5200 | 5653 | 0.317854 | GAACAAACGTTCTGCAGGGC | 60.318 | 55.000 | 15.13 | 6.12 | 39.79 | 5.19 |
5382 | 5843 | 4.530875 | CAAGCCTTCTTGGATATGGACTT | 58.469 | 43.478 | 0.00 | 0.00 | 44.53 | 3.01 |
5457 | 5930 | 0.612453 | AGACTCCTCTGACCGGAACC | 60.612 | 60.000 | 9.46 | 0.00 | 0.00 | 3.62 |
5472 | 5945 | 1.275573 | GGAACCAGGTGTCCACTCTAC | 59.724 | 57.143 | 13.29 | 0.00 | 0.00 | 2.59 |
5480 | 5953 | 2.808543 | GGTGTCCACTCTACAAGCAAAG | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
5575 | 6050 | 3.261897 | ACTTGCTAGCAGTACCAGTTCAT | 59.738 | 43.478 | 18.45 | 0.00 | 0.00 | 2.57 |
5582 | 6058 | 5.207110 | AGCAGTACCAGTTCATATAGCAG | 57.793 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
5604 | 6080 | 6.824704 | GCAGTACGACTTATATCTCCCTAGAT | 59.175 | 42.308 | 0.00 | 0.00 | 44.80 | 1.98 |
5613 | 6091 | 9.978336 | ACTTATATCTCCCTAGATAAGTACACC | 57.022 | 37.037 | 9.41 | 0.00 | 45.59 | 4.16 |
5634 | 6112 | 2.476619 | CAGACAACAGGATCGTCACAAC | 59.523 | 50.000 | 0.00 | 0.00 | 31.92 | 3.32 |
5636 | 6114 | 2.869801 | GACAACAGGATCGTCACAACAA | 59.130 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
5637 | 6115 | 2.612212 | ACAACAGGATCGTCACAACAAC | 59.388 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
5652 | 6130 | 4.987912 | CACAACAACCACAAACTTCAAAGT | 59.012 | 37.500 | 0.00 | 0.00 | 42.04 | 2.66 |
5653 | 6131 | 6.016192 | TCACAACAACCACAAACTTCAAAGTA | 60.016 | 34.615 | 0.00 | 0.00 | 38.57 | 2.24 |
5654 | 6132 | 6.307800 | CACAACAACCACAAACTTCAAAGTAG | 59.692 | 38.462 | 0.00 | 0.00 | 38.57 | 2.57 |
5655 | 6133 | 6.207810 | ACAACAACCACAAACTTCAAAGTAGA | 59.792 | 34.615 | 0.00 | 0.00 | 38.57 | 2.59 |
5668 | 6146 | 9.998106 | AACTTCAAAGTAGAAGATGCTTACTAA | 57.002 | 29.630 | 10.37 | 0.00 | 46.18 | 2.24 |
5701 | 6182 | 2.223537 | TCATACATGCACAGTAGCCG | 57.776 | 50.000 | 6.93 | 0.00 | 0.00 | 5.52 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 0.588252 | CGTGGGTGTTGCAAGAAGAG | 59.412 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2 | 3 | 0.738389 | AACGTGGGTGTTGCAAGAAG | 59.262 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3 | 4 | 1.135257 | CAAACGTGGGTGTTGCAAGAA | 60.135 | 47.619 | 0.00 | 0.00 | 31.10 | 2.52 |
4 | 5 | 0.453793 | CAAACGTGGGTGTTGCAAGA | 59.546 | 50.000 | 0.00 | 0.00 | 31.10 | 3.02 |
6 | 7 | 0.603569 | AACAAACGTGGGTGTTGCAA | 59.396 | 45.000 | 10.68 | 0.00 | 36.62 | 4.08 |
7 | 8 | 0.603569 | AAACAAACGTGGGTGTTGCA | 59.396 | 45.000 | 11.85 | 0.00 | 37.99 | 4.08 |
8 | 9 | 0.995728 | CAAACAAACGTGGGTGTTGC | 59.004 | 50.000 | 11.85 | 0.00 | 37.99 | 4.17 |
9 | 10 | 0.995728 | GCAAACAAACGTGGGTGTTG | 59.004 | 50.000 | 11.85 | 4.61 | 37.99 | 3.33 |
10 | 11 | 0.456995 | CGCAAACAAACGTGGGTGTT | 60.457 | 50.000 | 6.69 | 6.69 | 39.63 | 3.32 |
11 | 12 | 1.137825 | CGCAAACAAACGTGGGTGT | 59.862 | 52.632 | 0.00 | 0.00 | 0.00 | 4.16 |
12 | 13 | 2.227568 | GCGCAAACAAACGTGGGTG | 61.228 | 57.895 | 0.30 | 0.00 | 0.00 | 4.61 |
13 | 14 | 2.103340 | GCGCAAACAAACGTGGGT | 59.897 | 55.556 | 0.30 | 0.00 | 0.00 | 4.51 |
14 | 15 | 2.656973 | GGCGCAAACAAACGTGGG | 60.657 | 61.111 | 10.83 | 0.00 | 0.00 | 4.61 |
19 | 20 | 3.987220 | AGACAATATTGGCGCAAACAAAC | 59.013 | 39.130 | 19.37 | 0.00 | 42.41 | 2.93 |
70 | 78 | 3.285484 | GCTGGTGAATCCACATGAAGAT | 58.715 | 45.455 | 0.00 | 0.00 | 44.93 | 2.40 |
96 | 110 | 7.500992 | GTCATTTGAGATTATGGGTAGTGAGA | 58.499 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
111 | 125 | 2.483714 | GGGCTAGATGCGTCATTTGAGA | 60.484 | 50.000 | 8.99 | 0.00 | 44.05 | 3.27 |
156 | 173 | 2.886523 | TCAAAGTTGTTGCCAGAGATGG | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
182 | 199 | 1.559682 | TGAAGCCACTAGTCCCCATTC | 59.440 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
187 | 204 | 1.562783 | AGTCTGAAGCCACTAGTCCC | 58.437 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
215 | 232 | 6.590677 | AGTCGTGCCTTAATCTTTTAGAAGAC | 59.409 | 38.462 | 0.00 | 0.00 | 44.27 | 3.01 |
227 | 244 | 3.472652 | TGTGTTGAAGTCGTGCCTTAAT | 58.527 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
268 | 285 | 2.426522 | TCCTCTCTTTCCAAATGCACG | 58.573 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
410 | 432 | 2.050077 | GCACAAAGCTCCGGCAAC | 60.050 | 61.111 | 0.00 | 0.00 | 41.70 | 4.17 |
421 | 443 | 1.289160 | ATGGCTAGAGGGAGCACAAA | 58.711 | 50.000 | 0.00 | 0.00 | 44.76 | 2.83 |
436 | 458 | 3.498018 | GGGAAAACACACATTTCAATGGC | 59.502 | 43.478 | 4.58 | 0.00 | 40.70 | 4.40 |
475 | 498 | 1.066858 | ACAATGACCGAGACAGCGAAT | 60.067 | 47.619 | 0.00 | 0.00 | 0.00 | 3.34 |
487 | 510 | 2.158971 | ACAAAAGGGTGCAACAATGACC | 60.159 | 45.455 | 3.06 | 0.00 | 39.98 | 4.02 |
488 | 511 | 3.123050 | GACAAAAGGGTGCAACAATGAC | 58.877 | 45.455 | 3.06 | 0.00 | 39.98 | 3.06 |
498 | 521 | 5.907866 | ATAAAATACCGGACAAAAGGGTG | 57.092 | 39.130 | 9.46 | 0.00 | 35.28 | 4.61 |
533 | 556 | 4.771114 | TGATACTCCCCATTACAACCAG | 57.229 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
534 | 557 | 7.737607 | AGTATATGATACTCCCCATTACAACCA | 59.262 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
535 | 558 | 8.147244 | AGTATATGATACTCCCCATTACAACC | 57.853 | 38.462 | 0.00 | 0.00 | 0.00 | 3.77 |
573 | 596 | 9.908747 | GGAGGTAGTATCATACACTAGTATCAT | 57.091 | 37.037 | 0.00 | 0.00 | 38.88 | 2.45 |
574 | 597 | 8.327271 | GGGAGGTAGTATCATACACTAGTATCA | 58.673 | 40.741 | 0.00 | 0.00 | 38.88 | 2.15 |
575 | 598 | 8.550585 | AGGGAGGTAGTATCATACACTAGTATC | 58.449 | 40.741 | 0.00 | 0.00 | 38.88 | 2.24 |
576 | 599 | 8.465798 | AGGGAGGTAGTATCATACACTAGTAT | 57.534 | 38.462 | 0.00 | 0.00 | 41.57 | 2.12 |
577 | 600 | 7.885209 | AGGGAGGTAGTATCATACACTAGTA | 57.115 | 40.000 | 0.00 | 0.00 | 34.10 | 1.82 |
578 | 601 | 6.783517 | AGGGAGGTAGTATCATACACTAGT | 57.216 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
579 | 602 | 9.179909 | CATTAGGGAGGTAGTATCATACACTAG | 57.820 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
580 | 603 | 7.614583 | GCATTAGGGAGGTAGTATCATACACTA | 59.385 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
581 | 604 | 6.437793 | GCATTAGGGAGGTAGTATCATACACT | 59.562 | 42.308 | 0.00 | 0.00 | 0.00 | 3.55 |
582 | 605 | 6.210784 | TGCATTAGGGAGGTAGTATCATACAC | 59.789 | 42.308 | 0.00 | 0.00 | 0.00 | 2.90 |
583 | 606 | 6.319715 | TGCATTAGGGAGGTAGTATCATACA | 58.680 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
584 | 607 | 6.852420 | TGCATTAGGGAGGTAGTATCATAC | 57.148 | 41.667 | 0.00 | 0.00 | 0.00 | 2.39 |
585 | 608 | 9.729550 | ATTATGCATTAGGGAGGTAGTATCATA | 57.270 | 33.333 | 3.54 | 0.00 | 0.00 | 2.15 |
586 | 609 | 8.629821 | ATTATGCATTAGGGAGGTAGTATCAT | 57.370 | 34.615 | 3.54 | 0.00 | 0.00 | 2.45 |
587 | 610 | 9.729550 | ATATTATGCATTAGGGAGGTAGTATCA | 57.270 | 33.333 | 3.54 | 0.00 | 0.00 | 2.15 |
625 | 648 | 8.786898 | TCGCCAATAAATAGAGTACTACGTAAT | 58.213 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
626 | 649 | 8.153479 | TCGCCAATAAATAGAGTACTACGTAA | 57.847 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
627 | 650 | 7.728847 | TCGCCAATAAATAGAGTACTACGTA | 57.271 | 36.000 | 0.00 | 0.00 | 0.00 | 3.57 |
628 | 651 | 6.624352 | TCGCCAATAAATAGAGTACTACGT | 57.376 | 37.500 | 0.00 | 0.00 | 0.00 | 3.57 |
629 | 652 | 7.806487 | TGATTCGCCAATAAATAGAGTACTACG | 59.194 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
630 | 653 | 9.472361 | TTGATTCGCCAATAAATAGAGTACTAC | 57.528 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
631 | 654 | 9.472361 | GTTGATTCGCCAATAAATAGAGTACTA | 57.528 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
632 | 655 | 7.441458 | GGTTGATTCGCCAATAAATAGAGTACT | 59.559 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
633 | 656 | 7.441458 | AGGTTGATTCGCCAATAAATAGAGTAC | 59.559 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
634 | 657 | 7.506114 | AGGTTGATTCGCCAATAAATAGAGTA | 58.494 | 34.615 | 0.88 | 0.00 | 0.00 | 2.59 |
635 | 658 | 6.357367 | AGGTTGATTCGCCAATAAATAGAGT | 58.643 | 36.000 | 0.88 | 0.00 | 0.00 | 3.24 |
636 | 659 | 6.867662 | AGGTTGATTCGCCAATAAATAGAG | 57.132 | 37.500 | 0.88 | 0.00 | 0.00 | 2.43 |
637 | 660 | 7.390440 | CCATAGGTTGATTCGCCAATAAATAGA | 59.610 | 37.037 | 0.88 | 0.00 | 0.00 | 1.98 |
638 | 661 | 7.174946 | ACCATAGGTTGATTCGCCAATAAATAG | 59.825 | 37.037 | 0.00 | 0.00 | 27.29 | 1.73 |
639 | 662 | 7.001674 | ACCATAGGTTGATTCGCCAATAAATA | 58.998 | 34.615 | 0.00 | 0.00 | 27.29 | 1.40 |
640 | 663 | 5.833131 | ACCATAGGTTGATTCGCCAATAAAT | 59.167 | 36.000 | 0.00 | 0.00 | 27.29 | 1.40 |
641 | 664 | 5.197451 | ACCATAGGTTGATTCGCCAATAAA | 58.803 | 37.500 | 0.00 | 0.00 | 27.29 | 1.40 |
642 | 665 | 4.787551 | ACCATAGGTTGATTCGCCAATAA | 58.212 | 39.130 | 0.00 | 0.00 | 27.29 | 1.40 |
643 | 666 | 4.431416 | ACCATAGGTTGATTCGCCAATA | 57.569 | 40.909 | 0.00 | 0.00 | 27.29 | 1.90 |
644 | 667 | 3.297134 | ACCATAGGTTGATTCGCCAAT | 57.703 | 42.857 | 0.00 | 0.00 | 27.29 | 3.16 |
645 | 668 | 2.799126 | ACCATAGGTTGATTCGCCAA | 57.201 | 45.000 | 0.00 | 0.00 | 27.29 | 4.52 |
646 | 669 | 2.799126 | AACCATAGGTTGATTCGCCA | 57.201 | 45.000 | 0.00 | 0.00 | 45.07 | 5.69 |
656 | 679 | 3.914435 | ACCTAACCAACTCAACCATAGGT | 59.086 | 43.478 | 0.00 | 0.00 | 37.44 | 3.08 |
657 | 680 | 4.019681 | TCACCTAACCAACTCAACCATAGG | 60.020 | 45.833 | 0.00 | 0.00 | 35.62 | 2.57 |
658 | 681 | 5.160607 | TCACCTAACCAACTCAACCATAG | 57.839 | 43.478 | 0.00 | 0.00 | 0.00 | 2.23 |
659 | 682 | 5.163184 | TGTTCACCTAACCAACTCAACCATA | 60.163 | 40.000 | 0.00 | 0.00 | 37.27 | 2.74 |
660 | 683 | 4.142038 | GTTCACCTAACCAACTCAACCAT | 58.858 | 43.478 | 0.00 | 0.00 | 31.38 | 3.55 |
661 | 684 | 3.054287 | TGTTCACCTAACCAACTCAACCA | 60.054 | 43.478 | 0.00 | 0.00 | 37.27 | 3.67 |
662 | 685 | 3.547746 | TGTTCACCTAACCAACTCAACC | 58.452 | 45.455 | 0.00 | 0.00 | 37.27 | 3.77 |
663 | 686 | 4.035208 | CACTGTTCACCTAACCAACTCAAC | 59.965 | 45.833 | 0.00 | 0.00 | 37.27 | 3.18 |
664 | 687 | 4.196193 | CACTGTTCACCTAACCAACTCAA | 58.804 | 43.478 | 0.00 | 0.00 | 37.27 | 3.02 |
665 | 688 | 3.433031 | CCACTGTTCACCTAACCAACTCA | 60.433 | 47.826 | 0.00 | 0.00 | 37.27 | 3.41 |
666 | 689 | 3.139077 | CCACTGTTCACCTAACCAACTC | 58.861 | 50.000 | 0.00 | 0.00 | 37.27 | 3.01 |
667 | 690 | 2.508300 | ACCACTGTTCACCTAACCAACT | 59.492 | 45.455 | 0.00 | 0.00 | 37.27 | 3.16 |
668 | 691 | 2.927028 | ACCACTGTTCACCTAACCAAC | 58.073 | 47.619 | 0.00 | 0.00 | 37.27 | 3.77 |
669 | 692 | 4.263156 | GGATACCACTGTTCACCTAACCAA | 60.263 | 45.833 | 0.00 | 0.00 | 37.27 | 3.67 |
670 | 693 | 3.262405 | GGATACCACTGTTCACCTAACCA | 59.738 | 47.826 | 0.00 | 0.00 | 37.27 | 3.67 |
671 | 694 | 3.870274 | GGATACCACTGTTCACCTAACC | 58.130 | 50.000 | 0.00 | 0.00 | 37.27 | 2.85 |
703 | 726 | 0.779997 | AGCACCAGGATTTGAACCCT | 59.220 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
704 | 727 | 1.177401 | GAGCACCAGGATTTGAACCC | 58.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
705 | 728 | 1.541588 | GTGAGCACCAGGATTTGAACC | 59.458 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
706 | 729 | 2.229792 | TGTGAGCACCAGGATTTGAAC | 58.770 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
707 | 730 | 2.655090 | TGTGAGCACCAGGATTTGAA | 57.345 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
708 | 731 | 2.885135 | ATGTGAGCACCAGGATTTGA | 57.115 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
709 | 732 | 5.587388 | AATAATGTGAGCACCAGGATTTG | 57.413 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
710 | 733 | 5.163622 | CGAAATAATGTGAGCACCAGGATTT | 60.164 | 40.000 | 0.00 | 0.11 | 0.00 | 2.17 |
711 | 734 | 4.336433 | CGAAATAATGTGAGCACCAGGATT | 59.664 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
712 | 735 | 3.879295 | CGAAATAATGTGAGCACCAGGAT | 59.121 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
713 | 736 | 3.270027 | CGAAATAATGTGAGCACCAGGA | 58.730 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
714 | 737 | 2.355756 | CCGAAATAATGTGAGCACCAGG | 59.644 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
715 | 738 | 2.223340 | GCCGAAATAATGTGAGCACCAG | 60.223 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
716 | 739 | 1.742831 | GCCGAAATAATGTGAGCACCA | 59.257 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
717 | 740 | 2.017049 | AGCCGAAATAATGTGAGCACC | 58.983 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
718 | 741 | 2.677836 | TGAGCCGAAATAATGTGAGCAC | 59.322 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
719 | 742 | 2.984562 | TGAGCCGAAATAATGTGAGCA | 58.015 | 42.857 | 0.00 | 0.00 | 0.00 | 4.26 |
720 | 743 | 3.623060 | TCTTGAGCCGAAATAATGTGAGC | 59.377 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
721 | 744 | 5.525012 | TCATCTTGAGCCGAAATAATGTGAG | 59.475 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
722 | 745 | 5.427378 | TCATCTTGAGCCGAAATAATGTGA | 58.573 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
723 | 746 | 5.739752 | TCATCTTGAGCCGAAATAATGTG | 57.260 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
724 | 747 | 7.361542 | GCATATCATCTTGAGCCGAAATAATGT | 60.362 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
725 | 748 | 6.965500 | GCATATCATCTTGAGCCGAAATAATG | 59.035 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
726 | 749 | 6.094603 | GGCATATCATCTTGAGCCGAAATAAT | 59.905 | 38.462 | 0.00 | 0.00 | 27.86 | 1.28 |
727 | 750 | 5.412594 | GGCATATCATCTTGAGCCGAAATAA | 59.587 | 40.000 | 0.00 | 0.00 | 27.86 | 1.40 |
728 | 751 | 4.937620 | GGCATATCATCTTGAGCCGAAATA | 59.062 | 41.667 | 0.00 | 0.00 | 27.86 | 1.40 |
729 | 752 | 3.755378 | GGCATATCATCTTGAGCCGAAAT | 59.245 | 43.478 | 0.00 | 0.00 | 27.86 | 2.17 |
730 | 753 | 3.141398 | GGCATATCATCTTGAGCCGAAA | 58.859 | 45.455 | 0.00 | 0.00 | 27.86 | 3.46 |
731 | 754 | 2.771089 | GGCATATCATCTTGAGCCGAA | 58.229 | 47.619 | 0.00 | 0.00 | 27.86 | 4.30 |
732 | 755 | 2.462456 | GGCATATCATCTTGAGCCGA | 57.538 | 50.000 | 0.00 | 0.00 | 27.86 | 5.54 |
733 | 756 | 1.073964 | CGGCATATCATCTTGAGCCG | 58.926 | 55.000 | 9.32 | 9.32 | 46.82 | 5.52 |
734 | 757 | 1.446907 | CCGGCATATCATCTTGAGCC | 58.553 | 55.000 | 0.00 | 0.00 | 33.41 | 4.70 |
735 | 758 | 0.801251 | GCCGGCATATCATCTTGAGC | 59.199 | 55.000 | 24.80 | 0.00 | 0.00 | 4.26 |
736 | 759 | 2.289257 | TGAGCCGGCATATCATCTTGAG | 60.289 | 50.000 | 31.54 | 0.00 | 0.00 | 3.02 |
737 | 760 | 1.693606 | TGAGCCGGCATATCATCTTGA | 59.306 | 47.619 | 31.54 | 0.00 | 0.00 | 3.02 |
738 | 761 | 2.074576 | CTGAGCCGGCATATCATCTTG | 58.925 | 52.381 | 31.54 | 7.95 | 0.00 | 3.02 |
739 | 762 | 1.696336 | ACTGAGCCGGCATATCATCTT | 59.304 | 47.619 | 31.54 | 3.33 | 0.00 | 2.40 |
740 | 763 | 1.274728 | GACTGAGCCGGCATATCATCT | 59.725 | 52.381 | 31.54 | 11.40 | 0.00 | 2.90 |
741 | 764 | 1.274728 | AGACTGAGCCGGCATATCATC | 59.725 | 52.381 | 31.54 | 19.98 | 0.00 | 2.92 |
742 | 765 | 1.274728 | GAGACTGAGCCGGCATATCAT | 59.725 | 52.381 | 31.54 | 13.17 | 0.00 | 2.45 |
743 | 766 | 0.676184 | GAGACTGAGCCGGCATATCA | 59.324 | 55.000 | 31.54 | 22.44 | 0.00 | 2.15 |
744 | 767 | 0.965439 | AGAGACTGAGCCGGCATATC | 59.035 | 55.000 | 31.54 | 18.63 | 0.00 | 1.63 |
745 | 768 | 0.965439 | GAGAGACTGAGCCGGCATAT | 59.035 | 55.000 | 31.54 | 8.11 | 0.00 | 1.78 |
746 | 769 | 1.448119 | CGAGAGACTGAGCCGGCATA | 61.448 | 60.000 | 31.54 | 16.21 | 0.00 | 3.14 |
747 | 770 | 2.780094 | CGAGAGACTGAGCCGGCAT | 61.780 | 63.158 | 31.54 | 14.28 | 0.00 | 4.40 |
748 | 771 | 3.443925 | CGAGAGACTGAGCCGGCA | 61.444 | 66.667 | 31.54 | 7.98 | 0.00 | 5.69 |
749 | 772 | 4.200283 | CCGAGAGACTGAGCCGGC | 62.200 | 72.222 | 21.89 | 21.89 | 33.47 | 6.13 |
750 | 773 | 2.438614 | TCCGAGAGACTGAGCCGG | 60.439 | 66.667 | 0.00 | 0.00 | 41.36 | 6.13 |
751 | 774 | 2.477176 | CCTCCGAGAGACTGAGCCG | 61.477 | 68.421 | 0.00 | 0.00 | 0.00 | 5.52 |
752 | 775 | 1.379309 | ACCTCCGAGAGACTGAGCC | 60.379 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
753 | 776 | 1.806568 | CACCTCCGAGAGACTGAGC | 59.193 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
754 | 777 | 0.679640 | AGCACCTCCGAGAGACTGAG | 60.680 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
755 | 778 | 0.678366 | GAGCACCTCCGAGAGACTGA | 60.678 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
756 | 779 | 0.962855 | TGAGCACCTCCGAGAGACTG | 60.963 | 60.000 | 0.00 | 0.22 | 0.00 | 3.51 |
757 | 780 | 0.033601 | ATGAGCACCTCCGAGAGACT | 60.034 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
758 | 781 | 1.681538 | TATGAGCACCTCCGAGAGAC | 58.318 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
759 | 782 | 2.302260 | CTTATGAGCACCTCCGAGAGA | 58.698 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
760 | 783 | 1.339610 | CCTTATGAGCACCTCCGAGAG | 59.660 | 57.143 | 0.00 | 0.00 | 0.00 | 3.20 |
761 | 784 | 1.403814 | CCTTATGAGCACCTCCGAGA | 58.596 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
762 | 785 | 0.390860 | CCCTTATGAGCACCTCCGAG | 59.609 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
763 | 786 | 0.325296 | ACCCTTATGAGCACCTCCGA | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
764 | 787 | 1.341531 | CTACCCTTATGAGCACCTCCG | 59.658 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
765 | 788 | 1.694696 | CCTACCCTTATGAGCACCTCC | 59.305 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
766 | 789 | 1.694696 | CCCTACCCTTATGAGCACCTC | 59.305 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
767 | 790 | 1.009675 | ACCCTACCCTTATGAGCACCT | 59.990 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
768 | 791 | 1.141053 | CACCCTACCCTTATGAGCACC | 59.859 | 57.143 | 0.00 | 0.00 | 0.00 | 5.01 |
769 | 792 | 2.116238 | TCACCCTACCCTTATGAGCAC | 58.884 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
770 | 793 | 2.561209 | TCACCCTACCCTTATGAGCA | 57.439 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
771 | 794 | 2.551071 | GCATCACCCTACCCTTATGAGC | 60.551 | 54.545 | 0.00 | 0.00 | 0.00 | 4.26 |
772 | 795 | 2.289072 | CGCATCACCCTACCCTTATGAG | 60.289 | 54.545 | 0.00 | 0.00 | 0.00 | 2.90 |
773 | 796 | 1.691976 | CGCATCACCCTACCCTTATGA | 59.308 | 52.381 | 0.00 | 0.00 | 0.00 | 2.15 |
774 | 797 | 1.270839 | CCGCATCACCCTACCCTTATG | 60.271 | 57.143 | 0.00 | 0.00 | 0.00 | 1.90 |
775 | 798 | 1.056660 | CCGCATCACCCTACCCTTAT | 58.943 | 55.000 | 0.00 | 0.00 | 0.00 | 1.73 |
776 | 799 | 0.325860 | ACCGCATCACCCTACCCTTA | 60.326 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
777 | 800 | 0.325860 | TACCGCATCACCCTACCCTT | 60.326 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
778 | 801 | 0.105142 | ATACCGCATCACCCTACCCT | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
779 | 802 | 0.320697 | GATACCGCATCACCCTACCC | 59.679 | 60.000 | 0.00 | 0.00 | 33.46 | 3.69 |
780 | 803 | 1.045407 | TGATACCGCATCACCCTACC | 58.955 | 55.000 | 0.00 | 0.00 | 38.79 | 3.18 |
781 | 804 | 2.299013 | TCATGATACCGCATCACCCTAC | 59.701 | 50.000 | 0.00 | 0.00 | 46.41 | 3.18 |
782 | 805 | 2.604139 | TCATGATACCGCATCACCCTA | 58.396 | 47.619 | 0.00 | 0.00 | 46.41 | 3.53 |
783 | 806 | 1.423584 | TCATGATACCGCATCACCCT | 58.576 | 50.000 | 0.00 | 0.00 | 46.41 | 4.34 |
784 | 807 | 2.479566 | ATCATGATACCGCATCACCC | 57.520 | 50.000 | 6.36 | 0.00 | 46.41 | 4.61 |
785 | 808 | 4.758688 | TCATATCATGATACCGCATCACC | 58.241 | 43.478 | 17.60 | 0.00 | 46.41 | 4.02 |
835 | 858 | 9.295825 | AGACAATTTTAATGAGGTGTCATAACA | 57.704 | 29.630 | 4.60 | 0.00 | 43.04 | 2.41 |
839 | 862 | 9.520515 | AACTAGACAATTTTAATGAGGTGTCAT | 57.479 | 29.630 | 0.00 | 0.00 | 46.01 | 3.06 |
840 | 863 | 8.783093 | CAACTAGACAATTTTAATGAGGTGTCA | 58.217 | 33.333 | 0.00 | 0.00 | 38.24 | 3.58 |
841 | 864 | 8.999431 | TCAACTAGACAATTTTAATGAGGTGTC | 58.001 | 33.333 | 0.00 | 0.00 | 36.48 | 3.67 |
842 | 865 | 8.784043 | GTCAACTAGACAATTTTAATGAGGTGT | 58.216 | 33.333 | 0.00 | 0.00 | 46.77 | 4.16 |
859 | 882 | 6.266330 | AGCTAGTATCATGCATGTCAACTAGA | 59.734 | 38.462 | 36.61 | 22.16 | 37.48 | 2.43 |
860 | 883 | 6.453943 | AGCTAGTATCATGCATGTCAACTAG | 58.546 | 40.000 | 32.98 | 32.98 | 37.84 | 2.57 |
861 | 884 | 6.410942 | AGCTAGTATCATGCATGTCAACTA | 57.589 | 37.500 | 25.43 | 24.50 | 0.00 | 2.24 |
862 | 885 | 5.287674 | AGCTAGTATCATGCATGTCAACT | 57.712 | 39.130 | 25.43 | 24.67 | 0.00 | 3.16 |
863 | 886 | 6.870439 | TCATAGCTAGTATCATGCATGTCAAC | 59.130 | 38.462 | 25.43 | 19.94 | 0.00 | 3.18 |
864 | 887 | 6.996509 | TCATAGCTAGTATCATGCATGTCAA | 58.003 | 36.000 | 25.43 | 7.83 | 0.00 | 3.18 |
865 | 888 | 6.594788 | TCATAGCTAGTATCATGCATGTCA | 57.405 | 37.500 | 25.43 | 12.19 | 0.00 | 3.58 |
866 | 889 | 8.412456 | AGTATCATAGCTAGTATCATGCATGTC | 58.588 | 37.037 | 25.43 | 16.49 | 0.00 | 3.06 |
867 | 890 | 8.303780 | AGTATCATAGCTAGTATCATGCATGT | 57.696 | 34.615 | 25.43 | 15.34 | 0.00 | 3.21 |
868 | 891 | 9.676195 | GTAGTATCATAGCTAGTATCATGCATG | 57.324 | 37.037 | 21.07 | 21.07 | 0.00 | 4.06 |
869 | 892 | 8.855110 | GGTAGTATCATAGCTAGTATCATGCAT | 58.145 | 37.037 | 0.00 | 0.00 | 0.00 | 3.96 |
870 | 893 | 7.834181 | TGGTAGTATCATAGCTAGTATCATGCA | 59.166 | 37.037 | 0.00 | 0.00 | 0.00 | 3.96 |
871 | 894 | 8.226819 | TGGTAGTATCATAGCTAGTATCATGC | 57.773 | 38.462 | 0.00 | 0.00 | 0.00 | 4.06 |
877 | 900 | 9.376075 | GTCGTAATGGTAGTATCATAGCTAGTA | 57.624 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
878 | 901 | 7.336427 | GGTCGTAATGGTAGTATCATAGCTAGT | 59.664 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
879 | 902 | 7.465647 | CGGTCGTAATGGTAGTATCATAGCTAG | 60.466 | 44.444 | 0.00 | 0.00 | 0.00 | 3.42 |
880 | 903 | 6.314648 | CGGTCGTAATGGTAGTATCATAGCTA | 59.685 | 42.308 | 0.00 | 0.00 | 0.00 | 3.32 |
881 | 904 | 5.123502 | CGGTCGTAATGGTAGTATCATAGCT | 59.876 | 44.000 | 0.00 | 0.00 | 0.00 | 3.32 |
882 | 905 | 5.330295 | CGGTCGTAATGGTAGTATCATAGC | 58.670 | 45.833 | 0.00 | 0.00 | 0.00 | 2.97 |
883 | 906 | 5.675575 | GCCGGTCGTAATGGTAGTATCATAG | 60.676 | 48.000 | 1.90 | 0.00 | 0.00 | 2.23 |
884 | 907 | 4.156556 | GCCGGTCGTAATGGTAGTATCATA | 59.843 | 45.833 | 1.90 | 0.00 | 0.00 | 2.15 |
885 | 908 | 3.057033 | GCCGGTCGTAATGGTAGTATCAT | 60.057 | 47.826 | 1.90 | 0.00 | 0.00 | 2.45 |
886 | 909 | 2.294233 | GCCGGTCGTAATGGTAGTATCA | 59.706 | 50.000 | 1.90 | 0.00 | 0.00 | 2.15 |
887 | 910 | 2.352127 | GGCCGGTCGTAATGGTAGTATC | 60.352 | 54.545 | 1.90 | 0.00 | 0.00 | 2.24 |
888 | 911 | 1.615392 | GGCCGGTCGTAATGGTAGTAT | 59.385 | 52.381 | 1.90 | 0.00 | 0.00 | 2.12 |
889 | 912 | 1.032014 | GGCCGGTCGTAATGGTAGTA | 58.968 | 55.000 | 1.90 | 0.00 | 0.00 | 1.82 |
890 | 913 | 0.685458 | AGGCCGGTCGTAATGGTAGT | 60.685 | 55.000 | 1.90 | 0.00 | 0.00 | 2.73 |
891 | 914 | 1.321474 | TAGGCCGGTCGTAATGGTAG | 58.679 | 55.000 | 1.90 | 0.00 | 0.00 | 3.18 |
892 | 915 | 1.774110 | TTAGGCCGGTCGTAATGGTA | 58.226 | 50.000 | 1.90 | 0.00 | 0.00 | 3.25 |
893 | 916 | 1.125633 | ATTAGGCCGGTCGTAATGGT | 58.874 | 50.000 | 17.29 | 0.00 | 35.22 | 3.55 |
894 | 917 | 3.389925 | TTATTAGGCCGGTCGTAATGG | 57.610 | 47.619 | 22.71 | 0.00 | 36.67 | 3.16 |
895 | 918 | 4.624015 | TCTTTATTAGGCCGGTCGTAATG | 58.376 | 43.478 | 22.71 | 15.68 | 36.67 | 1.90 |
896 | 919 | 4.942761 | TCTTTATTAGGCCGGTCGTAAT | 57.057 | 40.909 | 20.00 | 20.00 | 38.72 | 1.89 |
897 | 920 | 4.942761 | ATCTTTATTAGGCCGGTCGTAA | 57.057 | 40.909 | 1.90 | 8.33 | 0.00 | 3.18 |
898 | 921 | 4.341806 | TCAATCTTTATTAGGCCGGTCGTA | 59.658 | 41.667 | 1.90 | 0.00 | 0.00 | 3.43 |
899 | 922 | 3.133362 | TCAATCTTTATTAGGCCGGTCGT | 59.867 | 43.478 | 1.90 | 0.00 | 0.00 | 4.34 |
900 | 923 | 3.493503 | GTCAATCTTTATTAGGCCGGTCG | 59.506 | 47.826 | 1.90 | 0.00 | 0.00 | 4.79 |
901 | 924 | 4.448210 | TGTCAATCTTTATTAGGCCGGTC | 58.552 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
902 | 925 | 4.497291 | TGTCAATCTTTATTAGGCCGGT | 57.503 | 40.909 | 1.90 | 0.00 | 0.00 | 5.28 |
903 | 926 | 4.152402 | CGATGTCAATCTTTATTAGGCCGG | 59.848 | 45.833 | 0.00 | 0.00 | 0.00 | 6.13 |
904 | 927 | 4.750098 | ACGATGTCAATCTTTATTAGGCCG | 59.250 | 41.667 | 0.00 | 0.00 | 0.00 | 6.13 |
905 | 928 | 5.179555 | GGACGATGTCAATCTTTATTAGGCC | 59.820 | 44.000 | 0.00 | 0.00 | 33.68 | 5.19 |
906 | 929 | 5.179555 | GGGACGATGTCAATCTTTATTAGGC | 59.820 | 44.000 | 0.00 | 0.00 | 33.68 | 3.93 |
907 | 930 | 6.525629 | AGGGACGATGTCAATCTTTATTAGG | 58.474 | 40.000 | 0.00 | 0.00 | 33.68 | 2.69 |
918 | 941 | 4.399618 | TGTTTTTCAAAGGGACGATGTCAA | 59.600 | 37.500 | 0.00 | 0.00 | 33.68 | 3.18 |
921 | 944 | 4.202111 | CCTTGTTTTTCAAAGGGACGATGT | 60.202 | 41.667 | 0.00 | 0.00 | 35.48 | 3.06 |
949 | 972 | 7.885399 | GGTCTTATATTTGGTTCTATCATGGCT | 59.115 | 37.037 | 0.00 | 0.00 | 0.00 | 4.75 |
952 | 975 | 9.003658 | GGTGGTCTTATATTTGGTTCTATCATG | 57.996 | 37.037 | 0.00 | 0.00 | 0.00 | 3.07 |
1012 | 1035 | 9.442033 | GAAAAGCATTTGGAATTTTTCTTGAAG | 57.558 | 29.630 | 0.00 | 0.00 | 39.02 | 3.02 |
1018 | 1041 | 7.263100 | ACCAGAAAAGCATTTGGAATTTTTC | 57.737 | 32.000 | 0.00 | 0.00 | 39.02 | 2.29 |
1038 | 1061 | 9.313118 | GGCATTTGGAATATACTTTTTAACCAG | 57.687 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
1075 | 1098 | 7.201333 | GCGTACAAACATCAACTCTTAGTAGAC | 60.201 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
1083 | 1106 | 3.120321 | TGGCGTACAAACATCAACTCT | 57.880 | 42.857 | 0.00 | 0.00 | 0.00 | 3.24 |
1145 | 1551 | 9.150348 | AGGAAAGCACCGATTTAATTTAAATTG | 57.850 | 29.630 | 21.19 | 17.15 | 38.42 | 2.32 |
1161 | 1567 | 1.269778 | GGACAAGCAAAGGAAAGCACC | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
1263 | 1669 | 4.911514 | TTGGACTTAGTTGAGGTTTTGC | 57.088 | 40.909 | 0.00 | 0.00 | 0.00 | 3.68 |
1329 | 1745 | 9.470399 | AATTTAGATTTAGTCGGGTTTTGGTAT | 57.530 | 29.630 | 0.00 | 0.00 | 0.00 | 2.73 |
1341 | 1758 | 9.952188 | GGAAGGCAACATAATTTAGATTTAGTC | 57.048 | 33.333 | 0.00 | 0.00 | 41.41 | 2.59 |
1350 | 1767 | 3.129638 | GTGCGGGAAGGCAACATAATTTA | 59.870 | 43.478 | 0.00 | 0.00 | 45.93 | 1.40 |
1356 | 1773 | 1.675641 | GAGTGCGGGAAGGCAACAT | 60.676 | 57.895 | 0.00 | 0.00 | 45.93 | 2.71 |
1420 | 1837 | 3.356290 | AGTGGTTCAAGGGCAATCATAC | 58.644 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
1424 | 1841 | 3.572255 | TGTTTAGTGGTTCAAGGGCAATC | 59.428 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
1429 | 1846 | 5.393027 | GCATACATGTTTAGTGGTTCAAGGG | 60.393 | 44.000 | 2.30 | 0.00 | 0.00 | 3.95 |
1430 | 1847 | 5.393027 | GGCATACATGTTTAGTGGTTCAAGG | 60.393 | 44.000 | 2.30 | 0.00 | 0.00 | 3.61 |
1431 | 1848 | 5.393027 | GGGCATACATGTTTAGTGGTTCAAG | 60.393 | 44.000 | 2.30 | 0.00 | 0.00 | 3.02 |
1514 | 1933 | 2.099921 | ACGTTCTAGATAGTGCAGCTGG | 59.900 | 50.000 | 17.12 | 0.00 | 0.00 | 4.85 |
1687 | 2110 | 2.666619 | CGCCTTTGAGTGACATTGCTTC | 60.667 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1699 | 2122 | 2.754552 | TCCATTCCATTTCGCCTTTGAG | 59.245 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
1700 | 2123 | 2.801483 | TCCATTCCATTTCGCCTTTGA | 58.199 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
1701 | 2124 | 3.591196 | TTCCATTCCATTTCGCCTTTG | 57.409 | 42.857 | 0.00 | 0.00 | 0.00 | 2.77 |
1739 | 2162 | 0.994995 | CTGTGCTCGACATTCTTCGG | 59.005 | 55.000 | 0.00 | 0.00 | 39.58 | 4.30 |
1740 | 2163 | 0.368227 | GCTGTGCTCGACATTCTTCG | 59.632 | 55.000 | 0.00 | 0.00 | 40.53 | 3.79 |
1741 | 2164 | 0.723981 | GGCTGTGCTCGACATTCTTC | 59.276 | 55.000 | 0.00 | 0.00 | 32.74 | 2.87 |
1742 | 2165 | 0.674895 | GGGCTGTGCTCGACATTCTT | 60.675 | 55.000 | 0.00 | 0.00 | 32.74 | 2.52 |
1743 | 2166 | 1.078848 | GGGCTGTGCTCGACATTCT | 60.079 | 57.895 | 0.00 | 0.00 | 32.74 | 2.40 |
1744 | 2167 | 1.364626 | CTGGGCTGTGCTCGACATTC | 61.365 | 60.000 | 0.00 | 0.00 | 32.74 | 2.67 |
1745 | 2168 | 1.376424 | CTGGGCTGTGCTCGACATT | 60.376 | 57.895 | 0.00 | 0.00 | 32.74 | 2.71 |
1746 | 2169 | 2.267006 | CTGGGCTGTGCTCGACAT | 59.733 | 61.111 | 0.00 | 0.00 | 32.74 | 3.06 |
1747 | 2170 | 4.687215 | GCTGGGCTGTGCTCGACA | 62.687 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
1748 | 2171 | 4.687215 | TGCTGGGCTGTGCTCGAC | 62.687 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1749 | 2172 | 4.383861 | CTGCTGGGCTGTGCTCGA | 62.384 | 66.667 | 0.00 | 0.00 | 0.00 | 4.04 |
1769 | 2192 | 4.286320 | ATCGACGGATCCAGCGGC | 62.286 | 66.667 | 19.47 | 4.69 | 0.00 | 6.53 |
1770 | 2193 | 2.049985 | GATCGACGGATCCAGCGG | 60.050 | 66.667 | 19.47 | 3.40 | 42.72 | 5.52 |
1771 | 2194 | 2.427575 | CGATCGACGGATCCAGCG | 60.428 | 66.667 | 10.26 | 14.40 | 45.16 | 5.18 |
1772 | 2195 | 1.658717 | CACGATCGACGGATCCAGC | 60.659 | 63.158 | 24.34 | 1.29 | 45.16 | 4.85 |
1773 | 2196 | 1.658717 | GCACGATCGACGGATCCAG | 60.659 | 63.158 | 24.34 | 7.30 | 45.16 | 3.86 |
1774 | 2197 | 2.336400 | CTGCACGATCGACGGATCCA | 62.336 | 60.000 | 24.34 | 6.52 | 45.16 | 3.41 |
1775 | 2198 | 1.658717 | CTGCACGATCGACGGATCC | 60.659 | 63.158 | 24.34 | 0.00 | 45.16 | 3.36 |
1777 | 2200 | 5.959801 | CGATAACTGCACGATCGACGGAT | 62.960 | 52.174 | 24.34 | 14.78 | 44.04 | 4.18 |
1778 | 2201 | 4.734447 | CGATAACTGCACGATCGACGGA | 62.734 | 54.545 | 24.34 | 12.51 | 44.04 | 4.69 |
1779 | 2202 | 2.496500 | CGATAACTGCACGATCGACGG | 61.497 | 57.143 | 24.34 | 19.59 | 44.04 | 4.79 |
1780 | 2203 | 0.764801 | CGATAACTGCACGATCGACG | 59.235 | 55.000 | 24.34 | 13.42 | 44.04 | 5.12 |
1781 | 2204 | 1.774085 | GACGATAACTGCACGATCGAC | 59.226 | 52.381 | 24.34 | 13.89 | 44.04 | 4.20 |
1782 | 2205 | 1.268386 | GGACGATAACTGCACGATCGA | 60.268 | 52.381 | 24.34 | 0.00 | 44.04 | 3.59 |
1783 | 2206 | 1.121240 | GGACGATAACTGCACGATCG | 58.879 | 55.000 | 14.88 | 14.88 | 46.12 | 3.69 |
1784 | 2207 | 2.203800 | TGGACGATAACTGCACGATC | 57.796 | 50.000 | 0.24 | 0.00 | 0.00 | 3.69 |
1785 | 2208 | 2.665649 | TTGGACGATAACTGCACGAT | 57.334 | 45.000 | 0.24 | 0.00 | 0.00 | 3.73 |
1786 | 2209 | 2.063266 | GTTTGGACGATAACTGCACGA | 58.937 | 47.619 | 0.24 | 0.00 | 0.00 | 4.35 |
1787 | 2210 | 1.795872 | TGTTTGGACGATAACTGCACG | 59.204 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
1788 | 2211 | 2.806244 | AGTGTTTGGACGATAACTGCAC | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
1789 | 2212 | 2.805671 | CAGTGTTTGGACGATAACTGCA | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
1790 | 2213 | 2.806244 | ACAGTGTTTGGACGATAACTGC | 59.194 | 45.455 | 0.00 | 0.00 | 38.84 | 4.40 |
1791 | 2214 | 3.121279 | CGACAGTGTTTGGACGATAACTG | 59.879 | 47.826 | 0.00 | 0.00 | 40.61 | 3.16 |
1792 | 2215 | 3.243636 | ACGACAGTGTTTGGACGATAACT | 60.244 | 43.478 | 8.15 | 0.00 | 35.67 | 2.24 |
1793 | 2216 | 3.054878 | ACGACAGTGTTTGGACGATAAC | 58.945 | 45.455 | 8.15 | 0.00 | 35.67 | 1.89 |
1794 | 2217 | 3.054166 | CACGACAGTGTTTGGACGATAA | 58.946 | 45.455 | 8.15 | 0.00 | 43.15 | 1.75 |
1795 | 2218 | 2.668250 | CACGACAGTGTTTGGACGATA | 58.332 | 47.619 | 8.15 | 0.00 | 43.15 | 2.92 |
1796 | 2219 | 1.497991 | CACGACAGTGTTTGGACGAT | 58.502 | 50.000 | 8.15 | 0.00 | 43.15 | 3.73 |
1797 | 2220 | 2.966324 | CACGACAGTGTTTGGACGA | 58.034 | 52.632 | 8.15 | 0.00 | 43.15 | 4.20 |
1807 | 2230 | 1.953559 | AATGCTTCACACACGACAGT | 58.046 | 45.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1808 | 2231 | 3.291585 | GAAAATGCTTCACACACGACAG | 58.708 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
1809 | 2232 | 2.286125 | CGAAAATGCTTCACACACGACA | 60.286 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
1810 | 2233 | 2.033236 | TCGAAAATGCTTCACACACGAC | 60.033 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
1811 | 2234 | 2.205911 | TCGAAAATGCTTCACACACGA | 58.794 | 42.857 | 0.00 | 0.00 | 0.00 | 4.35 |
1812 | 2235 | 2.661504 | TCGAAAATGCTTCACACACG | 57.338 | 45.000 | 0.00 | 0.00 | 0.00 | 4.49 |
1813 | 2236 | 4.087085 | CGAATTCGAAAATGCTTCACACAC | 59.913 | 41.667 | 23.29 | 0.00 | 43.02 | 3.82 |
1814 | 2237 | 4.024472 | TCGAATTCGAAAATGCTTCACACA | 60.024 | 37.500 | 27.36 | 0.00 | 46.30 | 3.72 |
1815 | 2238 | 4.463209 | TCGAATTCGAAAATGCTTCACAC | 58.537 | 39.130 | 27.36 | 0.00 | 46.30 | 3.82 |
1816 | 2239 | 4.740741 | TCGAATTCGAAAATGCTTCACA | 57.259 | 36.364 | 27.36 | 0.31 | 46.30 | 3.58 |
2221 | 2644 | 4.517934 | TCTCTACGAGGGGCCGGG | 62.518 | 72.222 | 2.18 | 0.00 | 0.00 | 5.73 |
2236 | 2661 | 2.373502 | CTGGGTGGGTCTCTTCTTTTCT | 59.626 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2239 | 2664 | 1.981495 | CTCTGGGTGGGTCTCTTCTTT | 59.019 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
2479 | 2904 | 3.522731 | CTCGGGTGAGGAGGCGAG | 61.523 | 72.222 | 0.00 | 0.00 | 38.65 | 5.03 |
2518 | 2944 | 1.540267 | CTAGAGCTACATCGAGGGGG | 58.460 | 60.000 | 0.69 | 0.00 | 0.00 | 5.40 |
2704 | 3131 | 1.578206 | GGAACAGACGAAGGGCAAGC | 61.578 | 60.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2923 | 3362 | 3.705604 | CACATGTCAAACAAACCTGGAC | 58.294 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2926 | 3365 | 3.162202 | TGCACATGTCAAACAAACCTG | 57.838 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
2927 | 3366 | 3.719924 | CATGCACATGTCAAACAAACCT | 58.280 | 40.909 | 0.00 | 0.00 | 34.23 | 3.50 |
2970 | 3409 | 2.435372 | ACAGCACTGTCCTCCAAAAA | 57.565 | 45.000 | 0.00 | 0.00 | 40.24 | 1.94 |
2975 | 3414 | 2.663826 | CTAGAACAGCACTGTCCTCC | 57.336 | 55.000 | 3.32 | 0.00 | 44.13 | 4.30 |
3127 | 3566 | 1.672356 | CTAGGTTGCGTTGCCAGCT | 60.672 | 57.895 | 0.33 | 0.33 | 36.14 | 4.24 |
3128 | 3567 | 0.672401 | TACTAGGTTGCGTTGCCAGC | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3168 | 3607 | 3.583806 | CATTTTTATGGCAAGCAACCGA | 58.416 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
3169 | 3608 | 2.672381 | CCATTTTTATGGCAAGCAACCG | 59.328 | 45.455 | 0.00 | 0.00 | 34.56 | 4.44 |
3172 | 3611 | 4.888326 | AGTCCATTTTTATGGCAAGCAA | 57.112 | 36.364 | 0.00 | 0.00 | 41.43 | 3.91 |
3174 | 3613 | 4.568956 | ACAAGTCCATTTTTATGGCAAGC | 58.431 | 39.130 | 0.00 | 0.00 | 41.43 | 4.01 |
3207 | 3646 | 4.321156 | GGCTGCAACAACATTACAGATGAA | 60.321 | 41.667 | 0.50 | 0.00 | 0.00 | 2.57 |
3517 | 3959 | 0.588252 | CAAACAGCCACGTCTGGAAG | 59.412 | 55.000 | 8.89 | 0.00 | 40.55 | 3.46 |
3580 | 4022 | 4.469657 | TCAGGCAATGAAGTACCTTGTTT | 58.530 | 39.130 | 0.00 | 0.00 | 34.02 | 2.83 |
3894 | 4336 | 6.367969 | ACACAAGTAAGCTAACCGATTAACAG | 59.632 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
3971 | 4413 | 4.101585 | ACTGTGAGAAATCCACAAGTCTCA | 59.898 | 41.667 | 0.00 | 0.00 | 43.07 | 3.27 |
4032 | 4474 | 1.912731 | TGGGGACAGATTTTGATCGGA | 59.087 | 47.619 | 0.00 | 0.00 | 35.01 | 4.55 |
4289 | 4734 | 1.095228 | AAACGCATATGCCGTCCTGG | 61.095 | 55.000 | 21.77 | 8.41 | 42.50 | 4.45 |
4332 | 4777 | 0.393537 | CACCCTCTCCACATGAAGGC | 60.394 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4508 | 4958 | 1.347707 | ACATCATCCTCACACAACGGT | 59.652 | 47.619 | 0.00 | 0.00 | 0.00 | 4.83 |
4513 | 4963 | 3.819368 | ACAACAACATCATCCTCACACA | 58.181 | 40.909 | 0.00 | 0.00 | 0.00 | 3.72 |
4600 | 5051 | 4.137116 | TGTCACACTAGCAACAGAAAGT | 57.863 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
4706 | 5157 | 3.726557 | TGGAATTGCTTCTCCACAGAT | 57.273 | 42.857 | 0.00 | 0.00 | 36.79 | 2.90 |
4730 | 5181 | 0.611896 | CCAAACCAGGATGACCACCC | 60.612 | 60.000 | 0.00 | 0.00 | 39.69 | 4.61 |
4744 | 5196 | 2.230660 | CTTCTCAACCCAGACCCAAAC | 58.769 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
4749 | 5201 | 1.700186 | AGAACCTTCTCAACCCAGACC | 59.300 | 52.381 | 0.00 | 0.00 | 29.94 | 3.85 |
4788 | 5240 | 9.700831 | ATTTCTTTATTATACACCTGAAGGCTT | 57.299 | 29.630 | 0.00 | 0.00 | 39.32 | 4.35 |
4856 | 5309 | 0.823460 | TCATCCGCACTACAGCATCA | 59.177 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
4858 | 5311 | 0.536724 | TGTCATCCGCACTACAGCAT | 59.463 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
4861 | 5314 | 1.929169 | CACATGTCATCCGCACTACAG | 59.071 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
4911 | 5364 | 4.593206 | TCTTTACAGAGGGAGTGTCATGTT | 59.407 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
4912 | 5365 | 4.160329 | TCTTTACAGAGGGAGTGTCATGT | 58.840 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
4917 | 5370 | 9.268282 | TCTTATATTTCTTTACAGAGGGAGTGT | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
4918 | 5371 | 9.757227 | CTCTTATATTTCTTTACAGAGGGAGTG | 57.243 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
4936 | 5389 | 9.422681 | TGAAGTAGTGGTCTAAAGCTCTTATAT | 57.577 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
4937 | 5390 | 8.818622 | TGAAGTAGTGGTCTAAAGCTCTTATA | 57.181 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
4938 | 5391 | 7.616150 | TCTGAAGTAGTGGTCTAAAGCTCTTAT | 59.384 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
4939 | 5392 | 6.946583 | TCTGAAGTAGTGGTCTAAAGCTCTTA | 59.053 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
4940 | 5393 | 5.775701 | TCTGAAGTAGTGGTCTAAAGCTCTT | 59.224 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4941 | 5394 | 5.326069 | TCTGAAGTAGTGGTCTAAAGCTCT | 58.674 | 41.667 | 0.00 | 0.00 | 0.00 | 4.09 |
4942 | 5395 | 5.646577 | TCTGAAGTAGTGGTCTAAAGCTC | 57.353 | 43.478 | 0.00 | 0.00 | 0.00 | 4.09 |
4943 | 5396 | 7.906199 | ATATCTGAAGTAGTGGTCTAAAGCT | 57.094 | 36.000 | 0.00 | 0.00 | 0.00 | 3.74 |
4944 | 5397 | 9.685828 | CTTATATCTGAAGTAGTGGTCTAAAGC | 57.314 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
4947 | 5400 | 9.069082 | GCTCTTATATCTGAAGTAGTGGTCTAA | 57.931 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
4948 | 5401 | 7.666388 | GGCTCTTATATCTGAAGTAGTGGTCTA | 59.334 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
4949 | 5402 | 6.492087 | GGCTCTTATATCTGAAGTAGTGGTCT | 59.508 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
4950 | 5403 | 6.492087 | AGGCTCTTATATCTGAAGTAGTGGTC | 59.508 | 42.308 | 0.00 | 0.00 | 0.00 | 4.02 |
4951 | 5404 | 6.377912 | AGGCTCTTATATCTGAAGTAGTGGT | 58.622 | 40.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4952 | 5405 | 6.909550 | AGGCTCTTATATCTGAAGTAGTGG | 57.090 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
5002 | 5455 | 6.053005 | CCCTCCGTAAACAAATATAAGAGCA | 58.947 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
5031 | 5484 | 1.871418 | TAGGATCCTCTGCAGCAGTT | 58.129 | 50.000 | 20.22 | 6.01 | 32.61 | 3.16 |
5106 | 5559 | 4.388773 | CGTGAATATATTGCACCACGCTAT | 59.611 | 41.667 | 18.60 | 0.00 | 43.06 | 2.97 |
5113 | 5566 | 4.814234 | TCCTGTTCGTGAATATATTGCACC | 59.186 | 41.667 | 1.78 | 0.82 | 0.00 | 5.01 |
5123 | 5576 | 0.321653 | GCCACCTCCTGTTCGTGAAT | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5200 | 5653 | 2.616510 | CCAACTACTGCAGGAGGAAAGG | 60.617 | 54.545 | 29.50 | 19.82 | 0.00 | 3.11 |
5382 | 5843 | 5.531659 | AGAGTAAGAACTTCTCACTGTTCGA | 59.468 | 40.000 | 0.00 | 0.00 | 44.95 | 3.71 |
5457 | 5930 | 1.344438 | TGCTTGTAGAGTGGACACCTG | 59.656 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
5472 | 5945 | 3.184541 | GCAGATATGGTTGCTTTGCTTG | 58.815 | 45.455 | 0.00 | 0.00 | 37.35 | 4.01 |
5480 | 5953 | 4.142315 | ACAATGAGTTGCAGATATGGTTGC | 60.142 | 41.667 | 0.00 | 0.00 | 38.96 | 4.17 |
5575 | 6050 | 7.859540 | AGGGAGATATAAGTCGTACTGCTATA | 58.140 | 38.462 | 0.00 | 0.00 | 0.00 | 1.31 |
5582 | 6058 | 9.889128 | ACTTATCTAGGGAGATATAAGTCGTAC | 57.111 | 37.037 | 6.49 | 0.00 | 42.92 | 3.67 |
5594 | 6070 | 5.193124 | TGTCTGGTGTACTTATCTAGGGAGA | 59.807 | 44.000 | 0.00 | 0.00 | 35.71 | 3.71 |
5604 | 6080 | 4.082408 | CGATCCTGTTGTCTGGTGTACTTA | 60.082 | 45.833 | 0.00 | 0.00 | 34.80 | 2.24 |
5613 | 6091 | 2.438868 | TGTGACGATCCTGTTGTCTG | 57.561 | 50.000 | 0.00 | 0.00 | 41.16 | 3.51 |
5634 | 6112 | 7.083875 | TCTTCTACTTTGAAGTTTGTGGTTG | 57.916 | 36.000 | 1.20 | 0.00 | 42.76 | 3.77 |
5636 | 6114 | 6.238759 | GCATCTTCTACTTTGAAGTTTGTGGT | 60.239 | 38.462 | 1.20 | 0.00 | 42.76 | 4.16 |
5637 | 6115 | 6.016777 | AGCATCTTCTACTTTGAAGTTTGTGG | 60.017 | 38.462 | 1.20 | 0.00 | 42.76 | 4.17 |
5668 | 6146 | 7.229106 | TGTGCATGTATGATATATGTTGTTGCT | 59.771 | 33.333 | 10.28 | 0.00 | 30.90 | 3.91 |
5681 | 6159 | 2.103094 | ACGGCTACTGTGCATGTATGAT | 59.897 | 45.455 | 0.00 | 0.00 | 34.04 | 2.45 |
5682 | 6160 | 1.480545 | ACGGCTACTGTGCATGTATGA | 59.519 | 47.619 | 0.00 | 0.00 | 34.04 | 2.15 |
5683 | 6161 | 1.939974 | ACGGCTACTGTGCATGTATG | 58.060 | 50.000 | 0.00 | 0.00 | 34.04 | 2.39 |
5685 | 6163 | 2.097036 | AGTACGGCTACTGTGCATGTA | 58.903 | 47.619 | 0.00 | 0.00 | 31.46 | 2.29 |
5688 | 6166 | 3.741029 | CAGTACGGCTACTGTGCAT | 57.259 | 52.632 | 12.92 | 0.00 | 43.53 | 3.96 |
5701 | 6182 | 0.245813 | GACCCTCCGGTTCACAGTAC | 59.754 | 60.000 | 0.00 | 0.00 | 44.88 | 2.73 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.