Multiple sequence alignment - TraesCS3A01G382200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G382200 chr3A 100.000 3955 0 0 1 3955 632287015 632290969 0.000000e+00 7304
1 TraesCS3A01G382200 chr3A 82.249 738 123 7 2169 2904 632040545 632041276 7.210000e-177 630
2 TraesCS3A01G382200 chr3A 85.174 344 51 0 1649 1992 632039990 632040333 1.750000e-93 353
3 TraesCS3A01G382200 chr3A 85.000 220 33 0 1266 1485 632039497 632039716 1.430000e-54 224
4 TraesCS3A01G382200 chr3D 90.794 2933 143 65 253 3090 488905687 488902787 0.000000e+00 3803
5 TraesCS3A01G382200 chr3D 83.784 703 105 8 2203 2902 488950746 488950050 0.000000e+00 658
6 TraesCS3A01G382200 chr3D 86.217 341 47 0 1652 1992 488951340 488951000 1.740000e-98 370
7 TraesCS3A01G382200 chr3D 85.000 220 33 0 1266 1485 488951820 488951601 1.430000e-54 224
8 TraesCS3A01G382200 chr3D 83.884 242 22 10 3426 3652 488897729 488897490 8.610000e-52 215
9 TraesCS3A01G382200 chr3B 90.312 2921 152 65 253 3090 651499956 651502828 0.000000e+00 3705
10 TraesCS3A01G382200 chr3B 82.700 711 116 6 2194 2902 651426585 651427290 3.360000e-175 625
11 TraesCS3A01G382200 chr3B 82.897 649 106 4 2194 2841 489350888 489351532 2.650000e-161 579
12 TraesCS3A01G382200 chr3B 84.884 344 52 0 1649 1992 651425997 651426340 8.130000e-92 348
13 TraesCS3A01G382200 chr3B 83.721 344 56 0 1649 1992 489350300 489350643 3.810000e-85 326
14 TraesCS3A01G382200 chr3B 87.940 199 13 3 53 250 651499727 651499915 1.430000e-54 224
15 TraesCS3A01G382200 chr3B 74.441 626 109 23 3087 3681 651502993 651503598 5.140000e-54 222
16 TraesCS3A01G382200 chr3B 84.091 220 35 0 1266 1485 651425518 651425737 3.100000e-51 213
17 TraesCS3A01G382200 chr3B 83.478 230 32 6 3096 3323 651502896 651503121 4.000000e-50 209
18 TraesCS3A01G382200 chr3B 80.172 232 37 7 3096 3322 651503944 651504171 8.790000e-37 165
19 TraesCS3A01G382200 chr3B 84.211 114 17 1 3487 3599 651502988 651503101 4.180000e-20 110
20 TraesCS3A01G382200 chr4B 83.127 646 104 4 2194 2838 46933585 46934226 5.700000e-163 584
21 TraesCS3A01G382200 chr4B 83.140 344 58 0 1649 1992 46932997 46933340 8.250000e-82 315
22 TraesCS3A01G382200 chr2B 83.255 639 102 4 2204 2841 254626822 254626188 2.050000e-162 582
23 TraesCS3A01G382200 chr2B 84.164 341 54 0 1652 1992 254627417 254627077 8.190000e-87 331
24 TraesCS3A01G382200 chr7D 79.545 704 133 9 2203 2902 89311606 89310910 3.550000e-135 492
25 TraesCS3A01G382200 chr7D 81.600 250 42 4 1240 1486 89312825 89312577 1.860000e-48 204
26 TraesCS3A01G382200 chr1D 82.026 306 53 2 1653 1957 365083483 365083179 3.920000e-65 259
27 TraesCS3A01G382200 chr7B 81.124 249 45 2 1240 1486 40277460 40277212 8.670000e-47 198


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G382200 chr3A 632287015 632290969 3954 False 7304.000000 7304 100.000000 1 3955 1 chr3A.!!$F1 3954
1 TraesCS3A01G382200 chr3A 632039497 632041276 1779 False 402.333333 630 84.141000 1266 2904 3 chr3A.!!$F2 1638
2 TraesCS3A01G382200 chr3D 488902787 488905687 2900 True 3803.000000 3803 90.794000 253 3090 1 chr3D.!!$R2 2837
3 TraesCS3A01G382200 chr3D 488950050 488951820 1770 True 417.333333 658 85.000333 1266 2902 3 chr3D.!!$R3 1636
4 TraesCS3A01G382200 chr3B 651499727 651504171 4444 False 772.500000 3705 83.425667 53 3681 6 chr3B.!!$F3 3628
5 TraesCS3A01G382200 chr3B 489350300 489351532 1232 False 452.500000 579 83.309000 1649 2841 2 chr3B.!!$F1 1192
6 TraesCS3A01G382200 chr3B 651425518 651427290 1772 False 395.333333 625 83.891667 1266 2902 3 chr3B.!!$F2 1636
7 TraesCS3A01G382200 chr4B 46932997 46934226 1229 False 449.500000 584 83.133500 1649 2838 2 chr4B.!!$F1 1189
8 TraesCS3A01G382200 chr2B 254626188 254627417 1229 True 456.500000 582 83.709500 1652 2841 2 chr2B.!!$R1 1189
9 TraesCS3A01G382200 chr7D 89310910 89312825 1915 True 348.000000 492 80.572500 1240 2902 2 chr7D.!!$R1 1662

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
139 140 0.166814 GCTGTGCTGAACGACCATTC 59.833 55.0 0.00 0.0 0.0 2.67 F
785 876 0.179153 GATTTGGAAGGAAGCTGCGC 60.179 55.0 0.00 0.0 0.0 6.09 F
2101 2589 1.073216 GTGCATCCTCTGACGTCACG 61.073 60.0 15.76 11.2 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2022 2392 0.447801 CATACTTGGTGCGGTGCTTC 59.552 55.0 0.00 0.0 0.00 3.86 R
2552 3047 0.036388 GCGTCATGGGAAGGTGAGAA 60.036 55.0 0.00 0.0 0.00 2.87 R
3255 3848 0.179009 ATGCGCCATATTGTCAGGCT 60.179 50.0 4.18 0.0 46.14 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.581354 GCAGAGGGTGAGCGACAT 59.419 61.111 0.00 0.00 0.00 3.06
18 19 1.520342 GCAGAGGGTGAGCGACATC 60.520 63.158 0.00 0.00 0.00 3.06
19 20 1.226802 CAGAGGGTGAGCGACATCG 60.227 63.158 0.00 0.00 43.27 3.84
20 21 1.378646 AGAGGGTGAGCGACATCGA 60.379 57.895 5.26 0.00 43.02 3.59
21 22 0.753479 AGAGGGTGAGCGACATCGAT 60.753 55.000 5.26 0.00 43.02 3.59
26 27 2.333225 GAGCGACATCGATCGGCT 59.667 61.111 16.41 15.28 44.84 5.52
27 28 1.299468 GAGCGACATCGATCGGCTT 60.299 57.895 16.41 0.00 44.84 4.35
28 29 1.543941 GAGCGACATCGATCGGCTTG 61.544 60.000 16.41 12.94 44.84 4.01
29 30 1.878522 GCGACATCGATCGGCTTGT 60.879 57.895 16.41 16.00 42.49 3.16
30 31 0.594028 GCGACATCGATCGGCTTGTA 60.594 55.000 16.41 0.00 42.49 2.41
31 32 1.930817 GCGACATCGATCGGCTTGTAT 60.931 52.381 16.41 0.00 42.49 2.29
32 33 2.667448 GCGACATCGATCGGCTTGTATA 60.667 50.000 16.41 0.00 42.49 1.47
33 34 3.164358 CGACATCGATCGGCTTGTATAG 58.836 50.000 16.41 8.17 43.02 1.31
34 35 3.365064 CGACATCGATCGGCTTGTATAGT 60.365 47.826 16.41 1.77 43.02 2.12
35 36 4.547532 GACATCGATCGGCTTGTATAGTT 58.452 43.478 16.41 0.00 0.00 2.24
36 37 4.299155 ACATCGATCGGCTTGTATAGTTG 58.701 43.478 16.41 0.00 0.00 3.16
37 38 4.202121 ACATCGATCGGCTTGTATAGTTGT 60.202 41.667 16.41 0.00 0.00 3.32
38 39 5.009310 ACATCGATCGGCTTGTATAGTTGTA 59.991 40.000 16.41 0.00 0.00 2.41
39 40 5.104562 TCGATCGGCTTGTATAGTTGTAG 57.895 43.478 16.41 0.00 0.00 2.74
40 41 4.577693 TCGATCGGCTTGTATAGTTGTAGT 59.422 41.667 16.41 0.00 0.00 2.73
41 42 5.759763 TCGATCGGCTTGTATAGTTGTAGTA 59.240 40.000 16.41 0.00 0.00 1.82
42 43 6.429078 TCGATCGGCTTGTATAGTTGTAGTAT 59.571 38.462 16.41 0.00 0.00 2.12
43 44 7.040892 TCGATCGGCTTGTATAGTTGTAGTATT 60.041 37.037 16.41 0.00 0.00 1.89
44 45 7.060748 CGATCGGCTTGTATAGTTGTAGTATTG 59.939 40.741 7.38 0.00 0.00 1.90
45 46 7.337480 TCGGCTTGTATAGTTGTAGTATTGA 57.663 36.000 0.00 0.00 0.00 2.57
46 47 7.423199 TCGGCTTGTATAGTTGTAGTATTGAG 58.577 38.462 0.00 0.00 0.00 3.02
47 48 6.144080 CGGCTTGTATAGTTGTAGTATTGAGC 59.856 42.308 0.00 0.00 0.00 4.26
48 49 7.210873 GGCTTGTATAGTTGTAGTATTGAGCT 58.789 38.462 0.00 0.00 0.00 4.09
49 50 8.358148 GGCTTGTATAGTTGTAGTATTGAGCTA 58.642 37.037 0.00 0.00 0.00 3.32
50 51 9.182933 GCTTGTATAGTTGTAGTATTGAGCTAC 57.817 37.037 0.00 0.00 39.26 3.58
84 85 0.814457 TTGCGTAACCATTGGATGCC 59.186 50.000 10.37 0.00 0.00 4.40
138 139 0.534877 TGCTGTGCTGAACGACCATT 60.535 50.000 0.00 0.00 0.00 3.16
139 140 0.166814 GCTGTGCTGAACGACCATTC 59.833 55.000 0.00 0.00 0.00 2.67
140 141 1.511850 CTGTGCTGAACGACCATTCA 58.488 50.000 0.00 0.00 37.08 2.57
141 142 1.872952 CTGTGCTGAACGACCATTCAA 59.127 47.619 0.00 0.00 38.12 2.69
142 143 1.872952 TGTGCTGAACGACCATTCAAG 59.127 47.619 0.00 0.00 38.12 3.02
143 144 0.874390 TGCTGAACGACCATTCAAGC 59.126 50.000 0.00 0.00 38.12 4.01
155 156 1.471684 CATTCAAGCTCAAGACCCAGC 59.528 52.381 0.00 0.00 35.73 4.85
168 169 1.280421 GACCCAGCAAGGAAGATCAGT 59.720 52.381 0.00 0.00 41.22 3.41
184 185 2.989909 TCAGTTGATGTTGATCGCCAT 58.010 42.857 0.00 0.00 0.00 4.40
187 188 3.127376 CAGTTGATGTTGATCGCCATGAA 59.873 43.478 0.00 0.00 0.00 2.57
191 192 2.307934 TGTTGATCGCCATGAATCGA 57.692 45.000 0.00 0.25 39.17 3.59
196 197 2.827800 ATCGCCATGAATCGATCAGT 57.172 45.000 0.00 0.00 40.98 3.41
198 199 0.863799 CGCCATGAATCGATCAGTGG 59.136 55.000 14.99 14.99 42.53 4.00
200 201 1.888215 CCATGAATCGATCAGTGGGG 58.112 55.000 0.00 0.00 42.53 4.96
201 202 1.233019 CATGAATCGATCAGTGGGGC 58.767 55.000 0.00 0.00 42.53 5.80
202 203 0.250038 ATGAATCGATCAGTGGGGCG 60.250 55.000 0.00 0.00 42.53 6.13
203 204 1.595382 GAATCGATCAGTGGGGCGG 60.595 63.158 0.00 0.00 0.00 6.13
213 214 2.528127 TGGGGCGGAAAGTCTCCA 60.528 61.111 0.00 0.00 45.74 3.86
214 215 2.269241 GGGGCGGAAAGTCTCCAG 59.731 66.667 0.00 0.00 45.74 3.86
215 216 2.436824 GGGCGGAAAGTCTCCAGC 60.437 66.667 0.00 0.00 45.74 4.85
236 237 3.304525 GCATTCTCATATGGAGCAAGTGC 60.305 47.826 2.13 0.00 43.70 4.40
246 247 2.946762 GCAAGTGCGTGGGAACTC 59.053 61.111 0.00 0.00 27.38 3.01
294 334 2.683933 GGACCTCGAGGAGCCCAA 60.684 66.667 37.69 0.00 38.94 4.12
304 344 2.095461 GAGGAGCCCAAGTCATTTTCC 58.905 52.381 0.00 0.00 0.00 3.13
321 363 1.219124 CCAGCTAGCCACACACGAT 59.781 57.895 12.13 0.00 0.00 3.73
322 364 0.807667 CCAGCTAGCCACACACGATC 60.808 60.000 12.13 0.00 0.00 3.69
323 365 1.139734 AGCTAGCCACACACGATCG 59.860 57.895 14.88 14.88 0.00 3.69
324 366 1.138883 GCTAGCCACACACGATCGA 59.861 57.895 24.34 0.00 0.00 3.59
388 431 1.586028 CGGTTGCCAACATTCCTGG 59.414 57.895 10.18 0.00 36.99 4.45
402 445 2.199652 CCTGGCCGTTGCTTTTCCA 61.200 57.895 0.00 0.00 37.74 3.53
403 446 1.739049 CTGGCCGTTGCTTTTCCAA 59.261 52.632 0.00 0.00 37.74 3.53
406 449 1.217001 GGCCGTTGCTTTTCCAAAAG 58.783 50.000 7.34 7.34 46.25 2.27
407 450 1.472552 GGCCGTTGCTTTTCCAAAAGT 60.473 47.619 12.32 0.00 45.48 2.66
408 451 2.276201 GCCGTTGCTTTTCCAAAAGTT 58.724 42.857 12.32 0.00 45.48 2.66
409 452 2.284150 GCCGTTGCTTTTCCAAAAGTTC 59.716 45.455 12.32 4.22 45.48 3.01
411 454 3.796717 CCGTTGCTTTTCCAAAAGTTCTC 59.203 43.478 12.32 0.00 45.48 2.87
414 457 4.552166 TGCTTTTCCAAAAGTTCTCTCG 57.448 40.909 12.32 0.00 45.48 4.04
416 459 3.853676 GCTTTTCCAAAAGTTCTCTCGCC 60.854 47.826 12.32 0.00 45.48 5.54
417 460 1.508632 TTCCAAAAGTTCTCTCGCCG 58.491 50.000 0.00 0.00 0.00 6.46
422 473 0.680061 AAAGTTCTCTCGCCGGAAGT 59.320 50.000 5.05 0.00 0.00 3.01
432 483 2.202892 CCGGAAGTAAGCGCCTCC 60.203 66.667 2.29 1.58 0.00 4.30
433 484 2.722201 CCGGAAGTAAGCGCCTCCT 61.722 63.158 2.29 0.00 0.00 3.69
434 485 1.519455 CGGAAGTAAGCGCCTCCTG 60.519 63.158 2.29 0.00 0.00 3.86
435 486 1.597461 GGAAGTAAGCGCCTCCTGT 59.403 57.895 2.29 0.00 0.00 4.00
436 487 0.822164 GGAAGTAAGCGCCTCCTGTA 59.178 55.000 2.29 0.00 0.00 2.74
437 488 1.202428 GGAAGTAAGCGCCTCCTGTAG 60.202 57.143 2.29 0.00 0.00 2.74
442 493 1.996798 AAGCGCCTCCTGTAGCTATA 58.003 50.000 2.29 0.00 39.25 1.31
547 619 1.373570 CTTTCGAGCTGGGTGAATCC 58.626 55.000 0.00 0.00 0.00 3.01
699 771 6.706270 AGGCAGGACATAAATTCGTACTATTG 59.294 38.462 0.00 0.00 0.00 1.90
713 791 0.729116 CTATTGCAAGGCAGGACGTG 59.271 55.000 4.94 0.00 40.61 4.49
715 793 0.957395 ATTGCAAGGCAGGACGTGAG 60.957 55.000 4.94 0.00 40.61 3.51
734 812 5.445142 CGTGAGATCTCGTGAAATTTGAAGG 60.445 44.000 17.76 0.00 0.00 3.46
753 831 3.290710 AGGACGGGGATGAATTTTGATG 58.709 45.455 0.00 0.00 0.00 3.07
757 835 4.202441 ACGGGGATGAATTTTGATGAGAG 58.798 43.478 0.00 0.00 0.00 3.20
763 841 6.141462 GGATGAATTTTGATGAGAGCGAATC 58.859 40.000 0.00 0.00 0.00 2.52
766 844 3.997319 TTTTGATGAGAGCGAATCGTG 57.003 42.857 4.07 0.00 0.00 4.35
773 864 2.094234 TGAGAGCGAATCGTGATTTGGA 60.094 45.455 4.07 0.00 33.71 3.53
782 873 2.426522 TCGTGATTTGGAAGGAAGCTG 58.573 47.619 0.00 0.00 0.00 4.24
785 876 0.179153 GATTTGGAAGGAAGCTGCGC 60.179 55.000 0.00 0.00 0.00 6.09
812 903 5.656416 TCTGCCCTAAATTTGGACCAAATAG 59.344 40.000 28.57 22.58 42.32 1.73
886 977 5.334414 GGTCATAAATGCTGTTCATCGATCC 60.334 44.000 0.00 0.00 33.40 3.36
1008 1125 2.747467 GCTGACATACACCATGCCTCAT 60.747 50.000 0.00 0.00 38.29 2.90
1042 1165 3.470567 GCGCACACTCGGAAGACG 61.471 66.667 0.30 0.00 46.11 4.18
1189 1320 2.210961 CGATCTCCTGTACTAGCACGA 58.789 52.381 0.00 0.00 0.00 4.35
1190 1321 2.612672 CGATCTCCTGTACTAGCACGAA 59.387 50.000 0.00 0.00 0.00 3.85
1191 1322 3.064958 CGATCTCCTGTACTAGCACGAAA 59.935 47.826 0.00 0.00 0.00 3.46
1197 1342 6.152323 TCTCCTGTACTAGCACGAAACTATTT 59.848 38.462 0.00 0.00 0.00 1.40
1209 1354 3.181530 CGAAACTATTTGGTGCTCGAGTG 60.182 47.826 15.13 0.00 31.36 3.51
1489 1636 1.406180 TCTTCGTCGTGGTCAGTCAAA 59.594 47.619 0.00 0.00 0.00 2.69
1490 1637 2.035449 TCTTCGTCGTGGTCAGTCAAAT 59.965 45.455 0.00 0.00 0.00 2.32
1491 1638 2.519377 TCGTCGTGGTCAGTCAAATT 57.481 45.000 0.00 0.00 0.00 1.82
1493 1640 2.798283 TCGTCGTGGTCAGTCAAATTTC 59.202 45.455 0.00 0.00 0.00 2.17
1494 1641 2.096417 CGTCGTGGTCAGTCAAATTTCC 60.096 50.000 0.00 0.00 0.00 3.13
1495 1642 2.875933 GTCGTGGTCAGTCAAATTTCCA 59.124 45.455 0.00 0.00 0.00 3.53
1496 1643 3.314080 GTCGTGGTCAGTCAAATTTCCAA 59.686 43.478 0.00 0.00 0.00 3.53
1497 1644 4.023193 GTCGTGGTCAGTCAAATTTCCAAT 60.023 41.667 0.00 0.00 0.00 3.16
1498 1645 4.023279 TCGTGGTCAGTCAAATTTCCAATG 60.023 41.667 0.00 0.00 0.00 2.82
1499 1646 4.023279 CGTGGTCAGTCAAATTTCCAATGA 60.023 41.667 0.00 0.00 0.00 2.57
1525 1675 2.862541 TCCAACCACAAGAGTCCATTG 58.137 47.619 0.00 0.00 0.00 2.82
1526 1676 2.441375 TCCAACCACAAGAGTCCATTGA 59.559 45.455 0.00 0.00 0.00 2.57
1527 1677 2.816087 CCAACCACAAGAGTCCATTGAG 59.184 50.000 0.00 0.00 0.00 3.02
1529 1679 4.136796 CAACCACAAGAGTCCATTGAGAA 58.863 43.478 0.00 0.00 0.00 2.87
1530 1680 4.013267 ACCACAAGAGTCCATTGAGAAG 57.987 45.455 0.00 0.00 0.00 2.85
1533 1683 3.188048 CACAAGAGTCCATTGAGAAGCAC 59.812 47.826 0.00 0.00 0.00 4.40
1535 1685 3.608316 AGAGTCCATTGAGAAGCACTC 57.392 47.619 4.35 4.35 45.11 3.51
1536 1686 2.235898 AGAGTCCATTGAGAAGCACTCC 59.764 50.000 8.13 0.00 44.34 3.85
1571 1758 2.496871 CTGATCTCCAACTCTGTCTGCT 59.503 50.000 0.00 0.00 0.00 4.24
1573 1760 2.827800 TCTCCAACTCTGTCTGCTTG 57.172 50.000 0.00 0.00 0.00 4.01
1770 2134 2.429930 CCCAAGGAGAACGTGGCA 59.570 61.111 0.00 0.00 46.03 4.92
2022 2392 2.863312 GCTGATCAAGAGCTGGAGATCG 60.863 54.545 0.00 0.00 39.70 3.69
2059 2441 1.712401 TGTACGCGTCCATGGTTAAC 58.288 50.000 18.63 5.37 0.00 2.01
2068 2555 3.561503 GTCCATGGTTAACGAACTTTGC 58.438 45.455 12.58 0.00 35.74 3.68
2101 2589 1.073216 GTGCATCCTCTGACGTCACG 61.073 60.000 15.76 11.20 0.00 4.35
2102 2590 1.213013 GCATCCTCTGACGTCACGT 59.787 57.895 15.76 0.09 45.10 4.49
2183 2678 4.425099 CTCGTGGAGGAGGTGAGT 57.575 61.111 0.00 0.00 0.00 3.41
2711 3206 0.176680 TCTTCCTCAGCATCTTCGGC 59.823 55.000 0.00 0.00 0.00 5.54
2714 3209 1.880340 CCTCAGCATCTTCGGCGTC 60.880 63.158 6.85 0.00 36.08 5.19
2966 3479 9.646336 GCTACATTGGTGTAACTTATTAATTCG 57.354 33.333 0.00 0.00 40.16 3.34
3043 3572 9.651913 ACAGTACAAAATTTTCAGATTGTTTGT 57.348 25.926 0.00 5.11 37.25 2.83
3086 3615 8.318412 GGTAGATTGTCATAAATTTTGGGGTTT 58.682 33.333 0.00 0.00 0.00 3.27
3093 3622 9.681062 TGTCATAAATTTTGGGGTTTAAAAACA 57.319 25.926 7.80 0.00 40.63 2.83
3099 3690 5.740290 TTTGGGGTTTAAAAACACACTCA 57.260 34.783 9.85 0.00 44.04 3.41
3103 3694 5.932883 TGGGGTTTAAAAACACACTCAAAAC 59.067 36.000 9.85 0.00 44.04 2.43
3118 3709 7.376072 CACACTCAAAACGGATCTTTTCTTAAC 59.624 37.037 0.00 0.00 0.00 2.01
3154 3745 3.486383 TCATTCGACTTTTCTTTGGCCT 58.514 40.909 3.32 0.00 0.00 5.19
3155 3746 3.253188 TCATTCGACTTTTCTTTGGCCTG 59.747 43.478 3.32 0.00 0.00 4.85
3157 3748 2.218603 TCGACTTTTCTTTGGCCTGAC 58.781 47.619 3.32 0.00 0.00 3.51
3158 3749 1.946768 CGACTTTTCTTTGGCCTGACA 59.053 47.619 3.32 0.00 0.00 3.58
3159 3750 2.031682 CGACTTTTCTTTGGCCTGACAG 60.032 50.000 3.32 0.00 0.00 3.51
3160 3751 1.683385 ACTTTTCTTTGGCCTGACAGC 59.317 47.619 3.32 0.00 0.00 4.40
3161 3752 1.682854 CTTTTCTTTGGCCTGACAGCA 59.317 47.619 3.32 0.00 0.00 4.41
3162 3753 1.999648 TTTCTTTGGCCTGACAGCAT 58.000 45.000 3.32 0.00 0.00 3.79
3164 3755 2.877097 TCTTTGGCCTGACAGCATTA 57.123 45.000 3.32 0.00 0.00 1.90
3165 3756 3.370840 TCTTTGGCCTGACAGCATTAT 57.629 42.857 3.32 0.00 0.00 1.28
3166 3757 3.018856 TCTTTGGCCTGACAGCATTATG 58.981 45.455 3.32 0.00 0.00 1.90
3167 3758 1.105457 TTGGCCTGACAGCATTATGC 58.895 50.000 9.46 9.46 45.46 3.14
3196 3789 7.971183 AGAGAACTCTGAACCTCATAAAAAC 57.029 36.000 3.39 0.00 38.75 2.43
3203 3796 6.954944 TCTGAACCTCATAAAAACAAACTCG 58.045 36.000 0.00 0.00 0.00 4.18
3204 3797 6.017440 TCTGAACCTCATAAAAACAAACTCGG 60.017 38.462 0.00 0.00 0.00 4.63
3216 3809 3.676093 ACAAACTCGGAAGGGATCTTTC 58.324 45.455 0.00 0.00 32.52 2.62
3227 3820 6.427441 GGAAGGGATCTTTCCTTAACTGAAT 58.573 40.000 17.19 0.00 43.98 2.57
3232 3825 6.353082 GGGATCTTTCCTTAACTGAATCCTGA 60.353 42.308 0.00 0.00 42.20 3.86
3238 3831 8.884124 TTTCCTTAACTGAATCCTGAATGAAT 57.116 30.769 0.00 0.00 0.00 2.57
3240 3833 6.763135 TCCTTAACTGAATCCTGAATGAATCG 59.237 38.462 0.00 0.00 0.00 3.34
3241 3834 6.540189 CCTTAACTGAATCCTGAATGAATCGT 59.460 38.462 0.00 0.00 0.00 3.73
3246 3839 5.359756 TGAATCCTGAATGAATCGTTCGAT 58.640 37.500 10.25 1.68 32.58 3.59
3247 3840 5.817296 TGAATCCTGAATGAATCGTTCGATT 59.183 36.000 18.22 18.22 37.53 3.34
3253 3846 6.467047 CCTGAATGAATCGTTCGATTTTTCTG 59.533 38.462 25.59 24.60 35.29 3.02
3255 3848 8.024146 TGAATGAATCGTTCGATTTTTCTGTA 57.976 30.769 25.59 14.80 35.29 2.74
3256 3849 8.168626 TGAATGAATCGTTCGATTTTTCTGTAG 58.831 33.333 25.59 0.00 35.29 2.74
3257 3850 5.854157 TGAATCGTTCGATTTTTCTGTAGC 58.146 37.500 18.98 6.31 35.29 3.58
3268 3861 7.011389 TCGATTTTTCTGTAGCCTGACAATATG 59.989 37.037 0.00 0.00 0.00 1.78
3269 3862 6.757897 TTTTTCTGTAGCCTGACAATATGG 57.242 37.500 0.00 0.00 0.00 2.74
3270 3863 3.475566 TCTGTAGCCTGACAATATGGC 57.524 47.619 0.00 0.00 46.42 4.40
3285 3878 1.374568 TGGCGCATCCAAGAGAACA 59.625 52.632 10.83 0.00 43.21 3.18
3287 3880 1.648467 GGCGCATCCAAGAGAACACC 61.648 60.000 10.83 0.00 34.01 4.16
3293 3886 3.866651 CATCCAAGAGAACACCGAATCT 58.133 45.455 0.00 0.00 0.00 2.40
3295 3888 2.094700 TCCAAGAGAACACCGAATCTCG 60.095 50.000 0.00 0.00 45.34 4.04
3298 3891 4.482386 CAAGAGAACACCGAATCTCGTAA 58.518 43.478 0.00 0.00 45.34 3.18
3299 3892 4.778534 AGAGAACACCGAATCTCGTAAA 57.221 40.909 0.00 0.00 45.34 2.01
3302 3895 6.164176 AGAGAACACCGAATCTCGTAAAAAT 58.836 36.000 0.00 0.00 45.34 1.82
3303 3896 7.318141 AGAGAACACCGAATCTCGTAAAAATA 58.682 34.615 0.00 0.00 45.34 1.40
3308 3901 7.736447 ACACCGAATCTCGTAAAAATAAACTC 58.264 34.615 0.00 0.00 38.40 3.01
3309 3902 7.601508 ACACCGAATCTCGTAAAAATAAACTCT 59.398 33.333 0.00 0.00 38.40 3.24
3314 3907 9.974750 GAATCTCGTAAAAATAAACTCTGAAGG 57.025 33.333 0.00 0.00 0.00 3.46
3316 3909 6.370718 TCTCGTAAAAATAAACTCTGAAGGGC 59.629 38.462 0.00 0.00 0.00 5.19
3323 3916 7.603180 AAATAAACTCTGAAGGGCTCTTTTT 57.397 32.000 0.00 0.00 32.52 1.94
3324 3917 4.926140 AAACTCTGAAGGGCTCTTTTTG 57.074 40.909 0.00 0.00 32.52 2.44
3325 3918 3.864789 ACTCTGAAGGGCTCTTTTTGA 57.135 42.857 0.00 0.00 32.52 2.69
3327 3920 3.885901 ACTCTGAAGGGCTCTTTTTGAAC 59.114 43.478 0.00 0.00 32.52 3.18
3328 3921 3.222603 TCTGAAGGGCTCTTTTTGAACC 58.777 45.455 0.00 0.00 32.52 3.62
3329 3922 3.117512 TCTGAAGGGCTCTTTTTGAACCT 60.118 43.478 0.00 0.00 34.71 3.50
3330 3923 2.958355 TGAAGGGCTCTTTTTGAACCTG 59.042 45.455 0.00 0.00 33.88 4.00
3331 3924 3.222603 GAAGGGCTCTTTTTGAACCTGA 58.777 45.455 0.00 0.00 33.88 3.86
3332 3925 3.312736 AGGGCTCTTTTTGAACCTGAA 57.687 42.857 0.00 0.00 32.82 3.02
3333 3926 3.849527 AGGGCTCTTTTTGAACCTGAAT 58.150 40.909 0.00 0.00 32.82 2.57
3334 3927 3.575687 AGGGCTCTTTTTGAACCTGAATG 59.424 43.478 0.00 0.00 32.82 2.67
3335 3928 3.573967 GGGCTCTTTTTGAACCTGAATGA 59.426 43.478 0.00 0.00 31.75 2.57
3336 3929 4.039124 GGGCTCTTTTTGAACCTGAATGAA 59.961 41.667 0.00 0.00 31.75 2.57
3337 3930 5.279657 GGGCTCTTTTTGAACCTGAATGAAT 60.280 40.000 0.00 0.00 31.75 2.57
3338 3931 6.071391 GGGCTCTTTTTGAACCTGAATGAATA 60.071 38.462 0.00 0.00 31.75 1.75
3339 3932 7.378181 GGCTCTTTTTGAACCTGAATGAATAA 58.622 34.615 0.00 0.00 0.00 1.40
3340 3933 8.037166 GGCTCTTTTTGAACCTGAATGAATAAT 58.963 33.333 0.00 0.00 0.00 1.28
3341 3934 9.428097 GCTCTTTTTGAACCTGAATGAATAATT 57.572 29.630 0.00 0.00 0.00 1.40
3343 3936 9.624697 TCTTTTTGAACCTGAATGAATAATTCG 57.375 29.630 0.00 0.00 46.68 3.34
3344 3937 9.624697 CTTTTTGAACCTGAATGAATAATTCGA 57.375 29.630 0.00 0.00 46.68 3.71
3345 3938 8.964420 TTTTGAACCTGAATGAATAATTCGAC 57.036 30.769 0.00 0.00 46.68 4.20
3346 3939 7.921786 TTGAACCTGAATGAATAATTCGACT 57.078 32.000 0.00 0.00 46.68 4.18
3347 3940 7.921786 TGAACCTGAATGAATAATTCGACTT 57.078 32.000 0.00 0.00 46.68 3.01
3348 3941 8.335532 TGAACCTGAATGAATAATTCGACTTT 57.664 30.769 0.00 0.00 46.68 2.66
3349 3942 8.792633 TGAACCTGAATGAATAATTCGACTTTT 58.207 29.630 0.00 0.00 46.68 2.27
3350 3943 9.626045 GAACCTGAATGAATAATTCGACTTTTT 57.374 29.630 0.00 0.00 46.68 1.94
3370 3963 4.497473 TTTTAGAACGTCATTGGGCTTG 57.503 40.909 0.00 0.00 0.00 4.01
3371 3964 2.107950 TAGAACGTCATTGGGCTTGG 57.892 50.000 0.00 0.00 0.00 3.61
3372 3965 0.609131 AGAACGTCATTGGGCTTGGG 60.609 55.000 0.00 0.00 0.00 4.12
3373 3966 2.212900 GAACGTCATTGGGCTTGGGC 62.213 60.000 0.00 0.00 37.82 5.36
3374 3967 2.361610 CGTCATTGGGCTTGGGCT 60.362 61.111 0.00 0.00 38.73 5.19
3375 3968 1.978617 CGTCATTGGGCTTGGGCTT 60.979 57.895 0.00 0.00 38.73 4.35
3376 3969 1.893062 GTCATTGGGCTTGGGCTTC 59.107 57.895 0.00 0.00 38.73 3.86
3377 3970 1.305213 TCATTGGGCTTGGGCTTCC 60.305 57.895 0.00 0.00 38.73 3.46
3378 3971 2.039462 ATTGGGCTTGGGCTTCCC 59.961 61.111 0.00 0.00 45.71 3.97
3402 3995 6.567050 CATATGGATATGGGCATACAAAAGC 58.433 40.000 0.00 0.00 37.16 3.51
3403 3996 3.908476 TGGATATGGGCATACAAAAGCA 58.092 40.909 0.00 0.00 0.00 3.91
3404 3997 3.636300 TGGATATGGGCATACAAAAGCAC 59.364 43.478 0.00 0.00 33.92 4.40
3408 4001 2.315176 TGGGCATACAAAAGCACAAGT 58.685 42.857 0.00 0.00 41.98 3.16
3409 4002 2.697751 TGGGCATACAAAAGCACAAGTT 59.302 40.909 0.00 0.00 41.98 2.66
3410 4003 3.133721 TGGGCATACAAAAGCACAAGTTT 59.866 39.130 0.00 0.00 41.98 2.66
3411 4004 3.494251 GGGCATACAAAAGCACAAGTTTG 59.506 43.478 0.00 0.00 39.98 2.93
3412 4005 3.494251 GGCATACAAAAGCACAAGTTTGG 59.506 43.478 0.00 0.00 38.73 3.28
3413 4006 4.119136 GCATACAAAAGCACAAGTTTGGT 58.881 39.130 0.00 0.00 38.73 3.67
3414 4007 4.570369 GCATACAAAAGCACAAGTTTGGTT 59.430 37.500 0.00 0.00 38.73 3.67
3415 4008 5.276820 GCATACAAAAGCACAAGTTTGGTTC 60.277 40.000 0.00 0.00 38.73 3.62
3416 4009 3.249917 ACAAAAGCACAAGTTTGGTTCG 58.750 40.909 0.00 0.00 38.73 3.95
3417 4010 3.249917 CAAAAGCACAAGTTTGGTTCGT 58.750 40.909 0.00 0.00 36.18 3.85
3418 4011 2.844122 AAGCACAAGTTTGGTTCGTC 57.156 45.000 0.00 0.00 31.53 4.20
3419 4012 1.021968 AGCACAAGTTTGGTTCGTCC 58.978 50.000 0.00 0.00 0.00 4.79
3420 4013 1.021968 GCACAAGTTTGGTTCGTCCT 58.978 50.000 0.00 0.00 37.07 3.85
3421 4014 1.404035 GCACAAGTTTGGTTCGTCCTT 59.596 47.619 0.00 0.00 37.07 3.36
3422 4015 2.159296 GCACAAGTTTGGTTCGTCCTTT 60.159 45.455 0.00 0.00 37.07 3.11
3423 4016 3.434637 CACAAGTTTGGTTCGTCCTTTG 58.565 45.455 0.00 0.00 37.07 2.77
3424 4017 3.086282 ACAAGTTTGGTTCGTCCTTTGT 58.914 40.909 0.00 0.00 37.07 2.83
3425 4018 3.508402 ACAAGTTTGGTTCGTCCTTTGTT 59.492 39.130 0.00 0.00 37.07 2.83
3426 4019 4.021807 ACAAGTTTGGTTCGTCCTTTGTTT 60.022 37.500 0.00 0.00 37.07 2.83
3427 4020 5.183522 ACAAGTTTGGTTCGTCCTTTGTTTA 59.816 36.000 0.00 0.00 37.07 2.01
3428 4021 5.900865 AGTTTGGTTCGTCCTTTGTTTAA 57.099 34.783 1.80 0.00 37.07 1.52
3429 4022 5.643664 AGTTTGGTTCGTCCTTTGTTTAAC 58.356 37.500 0.00 0.00 37.07 2.01
3444 4037 7.598493 CCTTTGTTTAACCGAACATGAATGAAT 59.402 33.333 0.00 0.00 39.12 2.57
3461 4054 7.498070 GAATGAATCATTCGTCCTTTGTTTC 57.502 36.000 18.72 0.00 40.33 2.78
3473 4070 5.050634 CGTCCTTTGTTTCGTCTGACAATAA 60.051 40.000 8.73 0.00 35.85 1.40
3483 4080 5.852827 TCGTCTGACAATAATATGCATCCA 58.147 37.500 0.19 0.00 0.00 3.41
3485 4082 6.424812 TCGTCTGACAATAATATGCATCCAAG 59.575 38.462 0.19 0.00 0.00 3.61
3486 4083 6.203530 CGTCTGACAATAATATGCATCCAAGT 59.796 38.462 0.19 0.00 0.00 3.16
3487 4084 7.570140 CGTCTGACAATAATATGCATCCAAGTC 60.570 40.741 0.19 6.24 0.00 3.01
3501 4109 7.669427 TGCATCCAAGTCTCATAAAAACAAAT 58.331 30.769 0.00 0.00 0.00 2.32
3502 4110 7.814107 TGCATCCAAGTCTCATAAAAACAAATC 59.186 33.333 0.00 0.00 0.00 2.17
3503 4111 7.008628 GCATCCAAGTCTCATAAAAACAAATCG 59.991 37.037 0.00 0.00 0.00 3.34
3504 4112 6.378582 TCCAAGTCTCATAAAAACAAATCGC 58.621 36.000 0.00 0.00 0.00 4.58
3505 4113 6.016693 TCCAAGTCTCATAAAAACAAATCGCA 60.017 34.615 0.00 0.00 0.00 5.10
3506 4114 6.640499 CCAAGTCTCATAAAAACAAATCGCAA 59.360 34.615 0.00 0.00 0.00 4.85
3507 4115 7.148918 CCAAGTCTCATAAAAACAAATCGCAAG 60.149 37.037 0.00 0.00 0.00 4.01
3518 4131 4.082125 ACAAATCGCAAGGGATCTTTTCT 58.918 39.130 0.00 0.00 38.47 2.52
3542 4155 4.162040 ACTGAACCTGGATGGATCATTC 57.838 45.455 0.00 0.00 44.89 2.67
3545 4158 2.918712 ACCTGGATGGATCATTCGAC 57.081 50.000 0.00 0.00 39.71 4.20
3548 4161 3.137176 ACCTGGATGGATCATTCGACATT 59.863 43.478 0.00 0.00 39.71 2.71
3549 4162 4.139786 CCTGGATGGATCATTCGACATTT 58.860 43.478 0.00 0.00 38.35 2.32
3550 4163 4.023450 CCTGGATGGATCATTCGACATTTG 60.023 45.833 0.00 0.00 38.35 2.32
3552 4165 4.949238 TGGATGGATCATTCGACATTTGTT 59.051 37.500 0.00 0.00 0.00 2.83
3565 4178 7.709269 TCGACATTTGTTAGCCTGATAATAC 57.291 36.000 0.00 0.00 0.00 1.89
3566 4179 7.497595 TCGACATTTGTTAGCCTGATAATACT 58.502 34.615 0.00 0.00 0.00 2.12
3575 4188 3.392285 AGCCTGATAATACTGTGCATCCA 59.608 43.478 0.00 0.00 0.00 3.41
3583 4196 2.936919 ACTGTGCATCCAAGAGAACA 57.063 45.000 0.00 0.00 0.00 3.18
3587 4200 1.198637 GTGCATCCAAGAGAACACTGC 59.801 52.381 0.00 0.00 34.41 4.40
3590 4203 2.490903 GCATCCAAGAGAACACTGCATT 59.509 45.455 0.00 0.00 0.00 3.56
3593 4206 3.819368 TCCAAGAGAACACTGCATTTCA 58.181 40.909 0.00 0.00 0.00 2.69
3660 4473 8.998377 TGAATCATTCGACATTTTTCTAGAACA 58.002 29.630 4.18 0.00 0.00 3.18
3667 4480 7.751732 TCGACATTTTTCTAGAACATCATTGG 58.248 34.615 4.18 0.00 0.00 3.16
3677 4490 4.275810 AGAACATCATTGGACTTCCCATG 58.724 43.478 3.38 3.38 46.10 3.66
3695 4508 4.130118 CCATGTGGGAATACAGAACTAGC 58.870 47.826 0.00 0.00 40.01 3.42
3696 4509 4.384098 CCATGTGGGAATACAGAACTAGCA 60.384 45.833 0.00 0.00 40.01 3.49
3697 4510 4.901197 TGTGGGAATACAGAACTAGCAA 57.099 40.909 0.00 0.00 0.00 3.91
3698 4511 5.435686 TGTGGGAATACAGAACTAGCAAT 57.564 39.130 0.00 0.00 0.00 3.56
3699 4512 5.428253 TGTGGGAATACAGAACTAGCAATC 58.572 41.667 0.00 0.00 0.00 2.67
3700 4513 4.816925 GTGGGAATACAGAACTAGCAATCC 59.183 45.833 0.00 0.00 0.00 3.01
3701 4514 4.058817 GGGAATACAGAACTAGCAATCCG 58.941 47.826 0.00 0.00 0.00 4.18
3702 4515 4.443034 GGGAATACAGAACTAGCAATCCGT 60.443 45.833 0.00 0.00 0.00 4.69
3703 4516 4.745620 GGAATACAGAACTAGCAATCCGTC 59.254 45.833 0.00 0.00 0.00 4.79
3706 4519 2.301870 ACAGAACTAGCAATCCGTCCAA 59.698 45.455 0.00 0.00 0.00 3.53
3709 4522 4.215399 CAGAACTAGCAATCCGTCCAAAAA 59.785 41.667 0.00 0.00 0.00 1.94
3710 4523 5.010282 AGAACTAGCAATCCGTCCAAAAAT 58.990 37.500 0.00 0.00 0.00 1.82
3715 4528 3.447229 AGCAATCCGTCCAAAAATAAGGG 59.553 43.478 0.00 0.00 0.00 3.95
3721 4534 6.518516 TCCGTCCAAAAATAAGGGGTATAT 57.481 37.500 0.00 0.00 0.00 0.86
3741 4554 8.126700 GGTATATATTTGGTCCAAAGTCAAACG 58.873 37.037 21.31 0.00 36.76 3.60
3743 4556 2.131776 TTGGTCCAAAGTCAAACGGT 57.868 45.000 0.40 0.00 0.00 4.83
3753 4566 8.696175 GTCCAAAGTCAAACGGTATAAAATTTG 58.304 33.333 0.00 0.00 34.11 2.32
3754 4567 8.630917 TCCAAAGTCAAACGGTATAAAATTTGA 58.369 29.630 0.00 0.00 38.42 2.69
3755 4568 8.911662 CCAAAGTCAAACGGTATAAAATTTGAG 58.088 33.333 0.00 0.00 40.67 3.02
3756 4569 9.458374 CAAAGTCAAACGGTATAAAATTTGAGT 57.542 29.630 0.00 7.27 43.31 3.41
3789 4602 6.914259 AGGAAAAATTAGTAAGAGCAAGCAC 58.086 36.000 0.00 0.00 0.00 4.40
3791 4604 7.014230 AGGAAAAATTAGTAAGAGCAAGCACAA 59.986 33.333 0.00 0.00 0.00 3.33
3792 4605 7.814587 GGAAAAATTAGTAAGAGCAAGCACAAT 59.185 33.333 0.00 0.00 0.00 2.71
3794 4607 5.824904 ATTAGTAAGAGCAAGCACAATGG 57.175 39.130 0.00 0.00 0.00 3.16
3795 4608 1.815003 AGTAAGAGCAAGCACAATGGC 59.185 47.619 0.00 0.00 0.00 4.40
3796 4609 1.541147 GTAAGAGCAAGCACAATGGCA 59.459 47.619 0.00 0.00 35.83 4.92
3797 4610 0.601558 AAGAGCAAGCACAATGGCAG 59.398 50.000 0.00 0.00 35.83 4.85
3798 4611 1.214589 GAGCAAGCACAATGGCAGG 59.785 57.895 0.00 0.00 35.83 4.85
3799 4612 2.433664 GCAAGCACAATGGCAGGC 60.434 61.111 0.00 0.00 35.83 4.85
3800 4613 2.263540 CAAGCACAATGGCAGGCC 59.736 61.111 2.62 2.62 35.83 5.19
3801 4614 2.999063 AAGCACAATGGCAGGCCC 60.999 61.111 8.02 0.00 35.83 5.80
3806 4619 2.440065 CAATGGCAGGCCCGCTTA 60.440 61.111 11.56 0.53 35.87 3.09
3807 4620 2.440247 AATGGCAGGCCCGCTTAC 60.440 61.111 11.56 0.00 35.87 2.34
3808 4621 3.280938 AATGGCAGGCCCGCTTACA 62.281 57.895 11.56 0.29 35.87 2.41
3809 4622 2.572333 AATGGCAGGCCCGCTTACAT 62.572 55.000 11.56 3.00 35.87 2.29
3810 4623 3.211963 GGCAGGCCCGCTTACATG 61.212 66.667 11.56 0.00 0.00 3.21
3812 4625 3.211963 CAGGCCCGCTTACATGGC 61.212 66.667 0.00 0.00 44.59 4.40
3815 4628 3.525221 GCCCGCTTACATGGCAAT 58.475 55.556 0.00 0.00 44.70 3.56
3817 4630 0.593128 GCCCGCTTACATGGCAATAG 59.407 55.000 0.00 0.00 44.70 1.73
3818 4631 0.593128 CCCGCTTACATGGCAATAGC 59.407 55.000 0.00 0.00 41.10 2.97
3820 4633 1.265095 CCGCTTACATGGCAATAGCTG 59.735 52.381 0.00 0.00 41.70 4.24
3822 4635 2.222678 CGCTTACATGGCAATAGCTGAG 59.777 50.000 0.00 0.00 41.70 3.35
3823 4636 2.551459 GCTTACATGGCAATAGCTGAGG 59.449 50.000 0.00 0.00 41.70 3.86
3824 4637 3.745480 GCTTACATGGCAATAGCTGAGGA 60.745 47.826 0.00 0.00 41.70 3.71
3825 4638 2.338577 ACATGGCAATAGCTGAGGAC 57.661 50.000 0.00 0.00 41.70 3.85
3826 4639 1.842562 ACATGGCAATAGCTGAGGACT 59.157 47.619 0.00 0.00 41.70 3.85
3827 4640 2.240667 ACATGGCAATAGCTGAGGACTT 59.759 45.455 0.00 0.00 41.70 3.01
3828 4641 2.408271 TGGCAATAGCTGAGGACTTG 57.592 50.000 0.00 0.00 41.70 3.16
3831 4644 2.093235 GGCAATAGCTGAGGACTTGTCT 60.093 50.000 0.00 0.00 41.70 3.41
3832 4645 3.604582 GCAATAGCTGAGGACTTGTCTT 58.395 45.455 0.00 0.00 37.91 3.01
3833 4646 4.006319 GCAATAGCTGAGGACTTGTCTTT 58.994 43.478 0.00 0.00 37.91 2.52
3835 4648 5.618640 GCAATAGCTGAGGACTTGTCTTTTG 60.619 44.000 0.00 0.00 37.91 2.44
3836 4649 2.225467 AGCTGAGGACTTGTCTTTTGC 58.775 47.619 0.61 2.69 0.00 3.68
3837 4650 1.069636 GCTGAGGACTTGTCTTTTGCG 60.070 52.381 0.61 0.00 0.00 4.85
3838 4651 2.213499 CTGAGGACTTGTCTTTTGCGT 58.787 47.619 0.61 0.00 0.00 5.24
3839 4652 1.939934 TGAGGACTTGTCTTTTGCGTG 59.060 47.619 0.61 0.00 0.00 5.34
3840 4653 2.210116 GAGGACTTGTCTTTTGCGTGA 58.790 47.619 0.61 0.00 0.00 4.35
3841 4654 1.940613 AGGACTTGTCTTTTGCGTGAC 59.059 47.619 0.61 0.00 0.00 3.67
3842 4655 1.668751 GGACTTGTCTTTTGCGTGACA 59.331 47.619 0.61 0.00 40.86 3.58
3843 4656 2.096819 GGACTTGTCTTTTGCGTGACAA 59.903 45.455 8.04 8.04 46.73 3.18
3851 4664 6.027131 TGTCTTTTGCGTGACAATATTATGC 58.973 36.000 0.00 0.00 39.82 3.14
3852 4665 6.027131 GTCTTTTGCGTGACAATATTATGCA 58.973 36.000 0.00 0.00 38.31 3.96
3854 4667 3.961477 TGCGTGACAATATTATGCACC 57.039 42.857 0.00 0.40 31.91 5.01
3855 4668 2.616376 TGCGTGACAATATTATGCACCC 59.384 45.455 0.00 0.00 31.91 4.61
3856 4669 2.616376 GCGTGACAATATTATGCACCCA 59.384 45.455 0.00 0.00 0.00 4.51
3858 4671 4.789481 GCGTGACAATATTATGCACCCAAG 60.789 45.833 0.00 0.00 0.00 3.61
3859 4672 4.574421 CGTGACAATATTATGCACCCAAGA 59.426 41.667 0.00 0.00 0.00 3.02
3862 4675 6.974622 GTGACAATATTATGCACCCAAGAAAG 59.025 38.462 0.00 0.00 0.00 2.62
3864 4677 5.658190 ACAATATTATGCACCCAAGAAAGCT 59.342 36.000 0.00 0.00 0.00 3.74
3865 4678 6.183360 ACAATATTATGCACCCAAGAAAGCTC 60.183 38.462 0.00 0.00 0.00 4.09
3866 4679 3.439857 TTATGCACCCAAGAAAGCTCT 57.560 42.857 0.00 0.00 0.00 4.09
3867 4680 1.542492 ATGCACCCAAGAAAGCTCTG 58.458 50.000 0.00 0.00 30.03 3.35
3868 4681 0.473755 TGCACCCAAGAAAGCTCTGA 59.526 50.000 0.00 0.00 30.03 3.27
3869 4682 1.133823 TGCACCCAAGAAAGCTCTGAA 60.134 47.619 0.00 0.00 30.03 3.02
3871 4684 2.163211 GCACCCAAGAAAGCTCTGAATC 59.837 50.000 0.00 0.00 30.03 2.52
3872 4685 3.683802 CACCCAAGAAAGCTCTGAATCT 58.316 45.455 0.00 0.00 30.03 2.40
3873 4686 3.688673 CACCCAAGAAAGCTCTGAATCTC 59.311 47.826 0.00 0.00 30.03 2.75
3875 4688 4.018597 ACCCAAGAAAGCTCTGAATCTCAT 60.019 41.667 0.00 0.00 30.03 2.90
3879 4692 7.121759 CCCAAGAAAGCTCTGAATCTCATAAAA 59.878 37.037 0.00 0.00 30.03 1.52
3915 4888 5.001874 ACGGATCTTTTCTTAACTGAACCC 58.998 41.667 0.00 0.00 0.00 4.11
3923 4896 5.934935 TTCTTAACTGAACCCGAATGAAC 57.065 39.130 0.00 0.00 0.00 3.18
3928 4901 3.496331 ACTGAACCCGAATGAACCATTT 58.504 40.909 0.00 0.00 33.90 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.520342 GATGTCGCTCACCCTCTGC 60.520 63.158 0.00 0.00 0.00 4.26
1 2 1.226802 CGATGTCGCTCACCCTCTG 60.227 63.158 0.00 0.00 0.00 3.35
2 3 0.753479 ATCGATGTCGCTCACCCTCT 60.753 55.000 0.00 0.00 39.60 3.69
3 4 0.318275 GATCGATGTCGCTCACCCTC 60.318 60.000 0.54 0.00 39.60 4.30
4 5 1.736586 GATCGATGTCGCTCACCCT 59.263 57.895 0.54 0.00 39.60 4.34
5 6 1.658717 CGATCGATGTCGCTCACCC 60.659 63.158 10.26 0.00 39.60 4.61
6 7 1.658717 CCGATCGATGTCGCTCACC 60.659 63.158 18.66 0.00 40.17 4.02
7 8 2.296480 GCCGATCGATGTCGCTCAC 61.296 63.158 18.66 0.00 40.17 3.51
8 9 2.004808 AAGCCGATCGATGTCGCTCA 62.005 55.000 18.66 0.00 40.17 4.26
9 10 1.299468 AAGCCGATCGATGTCGCTC 60.299 57.895 18.66 0.00 40.17 5.03
10 11 1.589993 CAAGCCGATCGATGTCGCT 60.590 57.895 18.66 13.45 40.17 4.93
11 12 0.594028 TACAAGCCGATCGATGTCGC 60.594 55.000 18.66 11.10 40.17 5.19
12 13 2.051879 ATACAAGCCGATCGATGTCG 57.948 50.000 18.66 1.07 41.13 4.35
13 14 4.162096 ACTATACAAGCCGATCGATGTC 57.838 45.455 18.66 2.58 0.00 3.06
14 15 4.202121 ACAACTATACAAGCCGATCGATGT 60.202 41.667 18.66 19.37 0.00 3.06
15 16 4.299155 ACAACTATACAAGCCGATCGATG 58.701 43.478 18.66 14.61 0.00 3.84
16 17 4.585955 ACAACTATACAAGCCGATCGAT 57.414 40.909 18.66 0.00 0.00 3.59
17 18 4.577693 ACTACAACTATACAAGCCGATCGA 59.422 41.667 18.66 0.00 0.00 3.59
18 19 4.856664 ACTACAACTATACAAGCCGATCG 58.143 43.478 8.51 8.51 0.00 3.69
19 20 8.080417 TCAATACTACAACTATACAAGCCGATC 58.920 37.037 0.00 0.00 0.00 3.69
20 21 7.948357 TCAATACTACAACTATACAAGCCGAT 58.052 34.615 0.00 0.00 0.00 4.18
21 22 7.337480 TCAATACTACAACTATACAAGCCGA 57.663 36.000 0.00 0.00 0.00 5.54
22 23 6.144080 GCTCAATACTACAACTATACAAGCCG 59.856 42.308 0.00 0.00 0.00 5.52
23 24 7.210873 AGCTCAATACTACAACTATACAAGCC 58.789 38.462 0.00 0.00 0.00 4.35
24 25 9.182933 GTAGCTCAATACTACAACTATACAAGC 57.817 37.037 0.00 0.00 39.84 4.01
51 52 1.471119 ACGCAACTGGCTAGTAGCTA 58.529 50.000 21.20 14.89 41.99 3.32
84 85 6.581171 AGGAGGAATCTAGCTTTTTGTTTG 57.419 37.500 0.00 0.00 0.00 2.93
89 90 7.690256 TGAAAGTAGGAGGAATCTAGCTTTTT 58.310 34.615 0.00 0.00 0.00 1.94
138 139 0.473755 TTGCTGGGTCTTGAGCTTGA 59.526 50.000 0.00 0.00 36.11 3.02
139 140 0.879765 CTTGCTGGGTCTTGAGCTTG 59.120 55.000 0.00 0.00 36.11 4.01
140 141 0.251077 CCTTGCTGGGTCTTGAGCTT 60.251 55.000 0.00 0.00 36.11 3.74
141 142 1.130054 TCCTTGCTGGGTCTTGAGCT 61.130 55.000 0.00 0.00 36.11 4.09
142 143 0.250901 TTCCTTGCTGGGTCTTGAGC 60.251 55.000 0.00 0.00 36.20 4.26
143 144 1.349026 TCTTCCTTGCTGGGTCTTGAG 59.651 52.381 0.00 0.00 36.20 3.02
155 156 6.456584 CGATCAACATCAACTGATCTTCCTTG 60.457 42.308 9.64 0.00 43.82 3.61
168 169 3.002553 CGATTCATGGCGATCAACATCAA 59.997 43.478 0.00 0.00 0.00 2.57
180 181 1.233019 CCCACTGATCGATTCATGGC 58.767 55.000 14.27 0.00 34.37 4.40
184 185 1.143838 CGCCCCACTGATCGATTCA 59.856 57.895 0.00 0.00 0.00 2.57
187 188 1.622607 TTTCCGCCCCACTGATCGAT 61.623 55.000 0.00 0.00 0.00 3.59
191 192 1.201429 AGACTTTCCGCCCCACTGAT 61.201 55.000 0.00 0.00 0.00 2.90
193 194 1.376037 GAGACTTTCCGCCCCACTG 60.376 63.158 0.00 0.00 0.00 3.66
194 195 2.593956 GGAGACTTTCCGCCCCACT 61.594 63.158 0.00 0.00 35.91 4.00
202 203 3.340814 TGAGAATGCTGGAGACTTTCC 57.659 47.619 0.00 0.00 46.98 3.13
203 204 5.469421 CCATATGAGAATGCTGGAGACTTTC 59.531 44.000 3.65 0.00 0.00 2.62
213 214 4.135306 CACTTGCTCCATATGAGAATGCT 58.865 43.478 3.65 0.00 44.42 3.79
214 215 3.304525 GCACTTGCTCCATATGAGAATGC 60.305 47.826 3.65 1.31 44.42 3.56
215 216 3.059120 CGCACTTGCTCCATATGAGAATG 60.059 47.826 3.65 0.18 44.42 2.67
236 237 0.673644 AAATGCTCCGAGTTCCCACG 60.674 55.000 0.00 0.00 0.00 4.94
246 247 6.611381 TGAAATTCTAGTGAAAAATGCTCCG 58.389 36.000 0.00 0.00 35.63 4.63
250 251 5.578336 GGCCTGAAATTCTAGTGAAAAATGC 59.422 40.000 0.00 0.00 35.63 3.56
287 326 1.203287 GCTGGAAAATGACTTGGGCTC 59.797 52.381 0.00 0.00 0.00 4.70
292 332 3.084039 TGGCTAGCTGGAAAATGACTTG 58.916 45.455 15.72 0.00 0.00 3.16
294 334 2.040278 TGTGGCTAGCTGGAAAATGACT 59.960 45.455 15.72 0.00 0.00 3.41
304 344 1.142185 CGATCGTGTGTGGCTAGCTG 61.142 60.000 15.72 0.00 0.00 4.24
321 363 1.596603 TATACTCCGCCACGATTCGA 58.403 50.000 13.95 0.00 0.00 3.71
322 364 2.049228 GTTATACTCCGCCACGATTCG 58.951 52.381 4.14 4.14 0.00 3.34
323 365 3.088194 TGTTATACTCCGCCACGATTC 57.912 47.619 0.00 0.00 0.00 2.52
324 366 3.746045 ATGTTATACTCCGCCACGATT 57.254 42.857 0.00 0.00 0.00 3.34
332 374 1.792006 GCCGGGAATGTTATACTCCG 58.208 55.000 2.18 0.00 37.50 4.63
402 445 1.070289 ACTTCCGGCGAGAGAACTTTT 59.930 47.619 9.30 0.00 0.00 2.27
403 446 0.680061 ACTTCCGGCGAGAGAACTTT 59.320 50.000 9.30 0.00 0.00 2.66
406 449 1.910688 CTTACTTCCGGCGAGAGAAC 58.089 55.000 9.30 0.00 0.00 3.01
407 450 0.172803 GCTTACTTCCGGCGAGAGAA 59.827 55.000 9.30 2.17 0.00 2.87
408 451 1.807886 GCTTACTTCCGGCGAGAGA 59.192 57.895 9.30 0.00 0.00 3.10
409 452 4.403976 GCTTACTTCCGGCGAGAG 57.596 61.111 9.30 8.31 0.00 3.20
416 459 1.519455 CAGGAGGCGCTTACTTCCG 60.519 63.158 0.00 0.00 0.00 4.30
417 460 0.822164 TACAGGAGGCGCTTACTTCC 59.178 55.000 0.00 4.46 0.00 3.46
422 473 1.996798 ATAGCTACAGGAGGCGCTTA 58.003 50.000 7.64 0.00 34.14 3.09
456 507 0.657840 CCCGATTCGAAACTGATGGC 59.342 55.000 7.83 0.00 0.00 4.40
501 573 0.503539 CACGTACGCAACTAACGCAA 59.496 50.000 16.72 0.00 40.18 4.85
502 574 1.878524 GCACGTACGCAACTAACGCA 61.879 55.000 16.72 0.00 40.18 5.24
503 575 1.225289 GCACGTACGCAACTAACGC 60.225 57.895 16.72 1.64 40.18 4.84
504 576 1.413368 GGCACGTACGCAACTAACG 59.587 57.895 16.72 0.00 42.17 3.18
505 577 0.945265 TGGGCACGTACGCAACTAAC 60.945 55.000 16.72 0.02 0.00 2.34
506 578 0.945265 GTGGGCACGTACGCAACTAA 60.945 55.000 16.72 0.00 33.92 2.24
507 579 1.373246 GTGGGCACGTACGCAACTA 60.373 57.895 16.72 0.00 33.92 2.24
508 580 2.663852 GTGGGCACGTACGCAACT 60.664 61.111 16.72 0.00 33.92 3.16
509 581 3.719144 GGTGGGCACGTACGCAAC 61.719 66.667 16.72 6.07 33.92 4.17
547 619 4.996434 GATCGGATGGGCGGCTGG 62.996 72.222 9.56 0.00 0.00 4.85
699 771 1.078848 ATCTCACGTCCTGCCTTGC 60.079 57.895 0.00 0.00 0.00 4.01
713 791 5.220303 CGTCCTTCAAATTTCACGAGATCTC 60.220 44.000 13.05 13.05 0.00 2.75
715 793 4.201724 CCGTCCTTCAAATTTCACGAGATC 60.202 45.833 0.00 0.00 0.00 2.75
734 812 4.199310 TCTCATCAAAATTCATCCCCGTC 58.801 43.478 0.00 0.00 0.00 4.79
753 831 2.540515 TCCAAATCACGATTCGCTCTC 58.459 47.619 5.86 0.00 0.00 3.20
757 835 2.006888 TCCTTCCAAATCACGATTCGC 58.993 47.619 5.86 0.00 0.00 4.70
763 841 1.135575 GCAGCTTCCTTCCAAATCACG 60.136 52.381 0.00 0.00 0.00 4.35
785 876 1.743394 GTCCAAATTTAGGGCAGACGG 59.257 52.381 6.44 0.00 0.00 4.79
812 903 3.945285 TCCTCCGGATATCTTTGTTTTGC 59.055 43.478 3.57 0.00 0.00 3.68
833 924 2.438614 GAAAGGCGCCCCTCCTTC 60.439 66.667 26.15 14.39 42.75 3.46
1024 1141 3.470567 GTCTTCCGAGTGTGCGCG 61.471 66.667 0.00 0.00 37.65 6.86
1025 1142 3.470567 CGTCTTCCGAGTGTGCGC 61.471 66.667 0.00 0.00 39.56 6.09
1189 1320 2.484264 GCACTCGAGCACCAAATAGTTT 59.516 45.455 13.61 0.00 0.00 2.66
1190 1321 2.076863 GCACTCGAGCACCAAATAGTT 58.923 47.619 13.61 0.00 0.00 2.24
1191 1322 1.276421 AGCACTCGAGCACCAAATAGT 59.724 47.619 13.61 0.00 36.85 2.12
1197 1342 2.340078 GTCAGCACTCGAGCACCA 59.660 61.111 13.61 0.00 36.85 4.17
1209 1354 1.601166 AAACAAACCTACCGGTCAGC 58.399 50.000 12.40 0.00 44.73 4.26
1229 1374 2.645730 AAACAGCAGCACGAAACAAA 57.354 40.000 0.00 0.00 0.00 2.83
1489 1636 5.031495 TGGTTGGATTGGATCATTGGAAAT 58.969 37.500 0.00 0.00 0.00 2.17
1490 1637 4.222588 GTGGTTGGATTGGATCATTGGAAA 59.777 41.667 0.00 0.00 0.00 3.13
1491 1638 3.768757 GTGGTTGGATTGGATCATTGGAA 59.231 43.478 0.00 0.00 0.00 3.53
1493 1640 3.098377 TGTGGTTGGATTGGATCATTGG 58.902 45.455 0.00 0.00 0.00 3.16
1494 1641 4.463539 TCTTGTGGTTGGATTGGATCATTG 59.536 41.667 0.00 0.00 0.00 2.82
1495 1642 4.676109 TCTTGTGGTTGGATTGGATCATT 58.324 39.130 0.00 0.00 0.00 2.57
1496 1643 4.264083 ACTCTTGTGGTTGGATTGGATCAT 60.264 41.667 0.00 0.00 0.00 2.45
1497 1644 3.074390 ACTCTTGTGGTTGGATTGGATCA 59.926 43.478 0.00 0.00 0.00 2.92
1498 1645 3.690460 ACTCTTGTGGTTGGATTGGATC 58.310 45.455 0.00 0.00 0.00 3.36
1499 1646 3.562176 GGACTCTTGTGGTTGGATTGGAT 60.562 47.826 0.00 0.00 0.00 3.41
1525 1675 4.187694 CCATCTAAACTGGAGTGCTTCTC 58.812 47.826 1.79 1.79 42.07 2.87
1526 1676 3.054802 CCCATCTAAACTGGAGTGCTTCT 60.055 47.826 0.00 0.00 35.70 2.85
1527 1677 3.055094 TCCCATCTAAACTGGAGTGCTTC 60.055 47.826 0.00 0.00 35.70 3.86
1529 1679 2.237392 GTCCCATCTAAACTGGAGTGCT 59.763 50.000 0.00 0.00 35.70 4.40
1530 1680 2.237392 AGTCCCATCTAAACTGGAGTGC 59.763 50.000 0.00 0.00 35.70 4.40
1533 1683 4.653341 AGATCAGTCCCATCTAAACTGGAG 59.347 45.833 0.00 0.00 40.60 3.86
1535 1685 4.202305 GGAGATCAGTCCCATCTAAACTGG 60.202 50.000 0.00 0.00 40.60 4.00
1536 1686 4.406972 TGGAGATCAGTCCCATCTAAACTG 59.593 45.833 0.00 0.00 41.38 3.16
1571 1758 2.550180 TGGATTGAATCGAACGCAACAA 59.450 40.909 0.00 0.00 0.00 2.83
1573 1760 2.415168 TCTGGATTGAATCGAACGCAAC 59.585 45.455 0.00 0.00 0.00 4.17
1881 2245 0.976641 GGATGACGATGCAGGGGATA 59.023 55.000 0.00 0.00 0.00 2.59
2004 2374 3.641648 CTTCGATCTCCAGCTCTTGATC 58.358 50.000 8.50 8.50 33.88 2.92
2022 2392 0.447801 CATACTTGGTGCGGTGCTTC 59.552 55.000 0.00 0.00 0.00 3.86
2059 2441 7.440281 CACGATATATACATGAGCAAAGTTCG 58.560 38.462 0.00 1.19 0.00 3.95
2068 2555 6.916932 CAGAGGATGCACGATATATACATGAG 59.083 42.308 0.00 0.00 0.00 2.90
2081 2568 1.073216 GTGACGTCAGAGGATGCACG 61.073 60.000 20.73 0.00 37.98 5.34
2101 2589 0.884704 ACTGCACCAACGGTCATCAC 60.885 55.000 0.00 0.00 31.02 3.06
2102 2590 0.602638 GACTGCACCAACGGTCATCA 60.603 55.000 0.00 0.00 44.01 3.07
2145 2640 2.223525 GGTCCTCGTCGGAGTTCTTATG 60.224 54.545 0.00 0.00 44.20 1.90
2213 2708 2.820059 TGGCGTAGATTATGCAGGAG 57.180 50.000 0.00 0.00 42.42 3.69
2552 3047 0.036388 GCGTCATGGGAAGGTGAGAA 60.036 55.000 0.00 0.00 0.00 2.87
2553 3048 0.904865 AGCGTCATGGGAAGGTGAGA 60.905 55.000 0.00 0.00 32.02 3.27
2561 3056 2.659063 CCACCAGAGCGTCATGGGA 61.659 63.158 6.83 0.00 41.13 4.37
2711 3206 4.135153 CTGAGGAGGTGGCCGACG 62.135 72.222 0.00 0.00 0.00 5.12
2714 3209 4.463879 CTGCTGAGGAGGTGGCCG 62.464 72.222 0.00 0.00 0.00 6.13
2966 3479 0.665298 CTCCGGCGTAGTACTAACCC 59.335 60.000 14.65 11.93 0.00 4.11
3041 3570 0.591488 CGCGAGCGCACTCTATAACA 60.591 55.000 11.47 0.00 41.09 2.41
3042 3571 1.269444 CCGCGAGCGCACTCTATAAC 61.269 60.000 11.47 0.00 41.09 1.89
3043 3572 1.008881 CCGCGAGCGCACTCTATAA 60.009 57.895 11.47 0.00 41.09 0.98
3044 3573 0.881600 TACCGCGAGCGCACTCTATA 60.882 55.000 11.47 0.00 41.09 1.31
3086 3615 6.687081 AGATCCGTTTTGAGTGTGTTTTTA 57.313 33.333 0.00 0.00 0.00 1.52
3090 3619 5.357032 AGAAAAGATCCGTTTTGAGTGTGTT 59.643 36.000 0.00 0.00 29.58 3.32
3091 3620 4.881850 AGAAAAGATCCGTTTTGAGTGTGT 59.118 37.500 0.00 0.00 29.58 3.72
3092 3621 5.424121 AGAAAAGATCCGTTTTGAGTGTG 57.576 39.130 0.00 0.00 29.58 3.82
3093 3622 7.282450 AGTTAAGAAAAGATCCGTTTTGAGTGT 59.718 33.333 0.00 0.00 29.58 3.55
3099 3690 7.284716 AGGTTCAGTTAAGAAAAGATCCGTTTT 59.715 33.333 0.00 0.00 32.18 2.43
3103 3694 5.932303 TCAGGTTCAGTTAAGAAAAGATCCG 59.068 40.000 0.00 0.00 0.00 4.18
3150 3741 0.383231 GTGCATAATGCTGTCAGGCC 59.617 55.000 0.00 0.00 45.31 5.19
3154 3745 1.281577 TCTGGGTGCATAATGCTGTCA 59.718 47.619 0.00 0.00 45.31 3.58
3155 3746 1.945394 CTCTGGGTGCATAATGCTGTC 59.055 52.381 0.00 0.00 45.31 3.51
3157 3748 2.336945 TCTCTGGGTGCATAATGCTG 57.663 50.000 0.00 0.00 45.31 4.41
3158 3749 2.240667 AGTTCTCTGGGTGCATAATGCT 59.759 45.455 0.00 0.00 45.31 3.79
3159 3750 2.615912 GAGTTCTCTGGGTGCATAATGC 59.384 50.000 0.00 0.00 45.29 3.56
3160 3751 3.875727 CAGAGTTCTCTGGGTGCATAATG 59.124 47.826 18.74 0.00 34.28 1.90
3161 3752 3.776969 TCAGAGTTCTCTGGGTGCATAAT 59.223 43.478 23.86 0.00 38.23 1.28
3162 3753 3.173151 TCAGAGTTCTCTGGGTGCATAA 58.827 45.455 23.86 5.12 38.23 1.90
3164 3755 1.649321 TCAGAGTTCTCTGGGTGCAT 58.351 50.000 23.86 0.00 38.23 3.96
3165 3756 1.070758 GTTCAGAGTTCTCTGGGTGCA 59.929 52.381 23.86 6.94 38.23 4.57
3166 3757 1.609320 GGTTCAGAGTTCTCTGGGTGC 60.609 57.143 23.86 13.90 38.23 5.01
3167 3758 1.974236 AGGTTCAGAGTTCTCTGGGTG 59.026 52.381 23.86 5.48 38.23 4.61
3168 3759 2.252714 GAGGTTCAGAGTTCTCTGGGT 58.747 52.381 23.86 10.44 38.23 4.51
3185 3778 5.335661 CCCTTCCGAGTTTGTTTTTATGAGG 60.336 44.000 0.00 0.00 0.00 3.86
3196 3789 3.010420 GGAAAGATCCCTTCCGAGTTTG 58.990 50.000 8.12 0.00 40.10 2.93
3216 3809 6.540189 ACGATTCATTCAGGATTCAGTTAAGG 59.460 38.462 0.00 0.00 0.00 2.69
3227 3820 6.371548 AGAAAAATCGAACGATTCATTCAGGA 59.628 34.615 28.25 0.87 43.26 3.86
3232 3825 6.961554 GCTACAGAAAAATCGAACGATTCATT 59.038 34.615 19.94 17.36 43.26 2.57
3238 3831 3.678072 CAGGCTACAGAAAAATCGAACGA 59.322 43.478 0.00 0.00 0.00 3.85
3240 3833 4.451096 TGTCAGGCTACAGAAAAATCGAAC 59.549 41.667 0.00 0.00 0.00 3.95
3241 3834 4.637276 TGTCAGGCTACAGAAAAATCGAA 58.363 39.130 0.00 0.00 0.00 3.71
3246 3839 5.125417 GCCATATTGTCAGGCTACAGAAAAA 59.875 40.000 0.00 0.00 44.92 1.94
3247 3840 4.640201 GCCATATTGTCAGGCTACAGAAAA 59.360 41.667 0.00 0.00 44.92 2.29
3253 3846 0.868406 GCGCCATATTGTCAGGCTAC 59.132 55.000 0.00 0.00 46.14 3.58
3255 3848 0.179009 ATGCGCCATATTGTCAGGCT 60.179 50.000 4.18 0.00 46.14 4.58
3256 3849 0.239347 GATGCGCCATATTGTCAGGC 59.761 55.000 4.18 0.00 44.89 4.85
3257 3850 0.877071 GGATGCGCCATATTGTCAGG 59.123 55.000 4.18 0.00 36.34 3.86
3268 3861 1.648467 GGTGTTCTCTTGGATGCGCC 61.648 60.000 4.18 0.00 37.10 6.53
3269 3862 1.796796 GGTGTTCTCTTGGATGCGC 59.203 57.895 0.00 0.00 0.00 6.09
3270 3863 0.389817 TCGGTGTTCTCTTGGATGCG 60.390 55.000 0.00 0.00 0.00 4.73
3285 3878 7.816031 TCAGAGTTTATTTTTACGAGATTCGGT 59.184 33.333 3.37 0.00 45.59 4.69
3287 3880 9.676899 CTTCAGAGTTTATTTTTACGAGATTCG 57.323 33.333 0.00 0.00 46.93 3.34
3293 3886 6.235664 AGCCCTTCAGAGTTTATTTTTACGA 58.764 36.000 0.00 0.00 0.00 3.43
3295 3888 7.689446 AGAGCCCTTCAGAGTTTATTTTTAC 57.311 36.000 0.00 0.00 0.00 2.01
3298 3891 7.603180 AAAAGAGCCCTTCAGAGTTTATTTT 57.397 32.000 0.00 0.00 0.00 1.82
3299 3892 7.287696 TCAAAAAGAGCCCTTCAGAGTTTATTT 59.712 33.333 0.00 0.00 0.00 1.40
3302 3895 5.690865 TCAAAAAGAGCCCTTCAGAGTTTA 58.309 37.500 0.00 0.00 0.00 2.01
3303 3896 4.536765 TCAAAAAGAGCCCTTCAGAGTTT 58.463 39.130 0.00 0.00 0.00 2.66
3308 3901 3.650070 GGTTCAAAAAGAGCCCTTCAG 57.350 47.619 0.00 0.00 41.44 3.02
3323 3916 7.921786 AAGTCGAATTATTCATTCAGGTTCA 57.078 32.000 0.00 0.00 41.51 3.18
3324 3917 9.626045 AAAAAGTCGAATTATTCATTCAGGTTC 57.374 29.630 0.00 0.00 41.51 3.62
3348 3941 4.261825 CCAAGCCCAATGACGTTCTAAAAA 60.262 41.667 0.00 0.00 0.00 1.94
3349 3942 3.254657 CCAAGCCCAATGACGTTCTAAAA 59.745 43.478 0.00 0.00 0.00 1.52
3350 3943 2.817258 CCAAGCCCAATGACGTTCTAAA 59.183 45.455 0.00 0.00 0.00 1.85
3351 3944 2.432444 CCAAGCCCAATGACGTTCTAA 58.568 47.619 0.00 0.00 0.00 2.10
3352 3945 1.339631 CCCAAGCCCAATGACGTTCTA 60.340 52.381 0.00 0.00 0.00 2.10
3353 3946 0.609131 CCCAAGCCCAATGACGTTCT 60.609 55.000 0.00 0.00 0.00 3.01
3354 3947 1.883021 CCCAAGCCCAATGACGTTC 59.117 57.895 0.00 0.00 0.00 3.95
3355 3948 2.275380 GCCCAAGCCCAATGACGTT 61.275 57.895 0.00 0.00 0.00 3.99
3356 3949 2.676471 GCCCAAGCCCAATGACGT 60.676 61.111 0.00 0.00 0.00 4.34
3357 3950 1.937546 GAAGCCCAAGCCCAATGACG 61.938 60.000 0.00 0.00 41.25 4.35
3358 3951 1.607801 GGAAGCCCAAGCCCAATGAC 61.608 60.000 0.00 0.00 41.25 3.06
3359 3952 1.305213 GGAAGCCCAAGCCCAATGA 60.305 57.895 0.00 0.00 41.25 2.57
3360 3953 2.361567 GGGAAGCCCAAGCCCAATG 61.362 63.158 0.00 0.00 44.65 2.82
3361 3954 2.039462 GGGAAGCCCAAGCCCAAT 59.961 61.111 0.00 0.00 44.65 3.16
3378 3971 6.153170 TGCTTTTGTATGCCCATATCCATATG 59.847 38.462 0.00 0.00 39.80 1.78
3379 3972 6.153340 GTGCTTTTGTATGCCCATATCCATAT 59.847 38.462 0.00 0.00 0.00 1.78
3380 3973 5.476599 GTGCTTTTGTATGCCCATATCCATA 59.523 40.000 0.00 0.00 0.00 2.74
3381 3974 4.281688 GTGCTTTTGTATGCCCATATCCAT 59.718 41.667 0.00 0.00 0.00 3.41
3382 3975 3.636300 GTGCTTTTGTATGCCCATATCCA 59.364 43.478 0.00 0.00 0.00 3.41
3383 3976 3.636300 TGTGCTTTTGTATGCCCATATCC 59.364 43.478 0.00 0.00 0.00 2.59
3384 3977 4.916983 TGTGCTTTTGTATGCCCATATC 57.083 40.909 0.00 0.00 0.00 1.63
3385 3978 4.711355 ACTTGTGCTTTTGTATGCCCATAT 59.289 37.500 0.00 0.00 0.00 1.78
3386 3979 4.085733 ACTTGTGCTTTTGTATGCCCATA 58.914 39.130 0.00 0.00 0.00 2.74
3387 3980 2.899256 ACTTGTGCTTTTGTATGCCCAT 59.101 40.909 0.00 0.00 0.00 4.00
3388 3981 2.315176 ACTTGTGCTTTTGTATGCCCA 58.685 42.857 0.00 0.00 0.00 5.36
3389 3982 3.385193 AACTTGTGCTTTTGTATGCCC 57.615 42.857 0.00 0.00 0.00 5.36
3390 3983 3.494251 CCAAACTTGTGCTTTTGTATGCC 59.506 43.478 0.00 0.00 31.86 4.40
3391 3984 4.119136 ACCAAACTTGTGCTTTTGTATGC 58.881 39.130 0.00 0.00 31.86 3.14
3392 3985 5.051774 CGAACCAAACTTGTGCTTTTGTATG 60.052 40.000 0.00 0.00 31.86 2.39
3393 3986 5.040635 CGAACCAAACTTGTGCTTTTGTAT 58.959 37.500 0.00 0.00 31.86 2.29
3394 3987 4.082679 ACGAACCAAACTTGTGCTTTTGTA 60.083 37.500 0.00 0.00 31.86 2.41
3395 3988 3.249917 CGAACCAAACTTGTGCTTTTGT 58.750 40.909 0.00 0.00 31.86 2.83
3396 3989 3.249917 ACGAACCAAACTTGTGCTTTTG 58.750 40.909 0.00 0.00 33.30 2.44
3397 3990 3.507786 GACGAACCAAACTTGTGCTTTT 58.492 40.909 0.00 0.00 0.00 2.27
3398 3991 2.159296 GGACGAACCAAACTTGTGCTTT 60.159 45.455 0.00 0.00 38.79 3.51
3399 3992 1.404035 GGACGAACCAAACTTGTGCTT 59.596 47.619 0.00 0.00 38.79 3.91
3400 3993 1.021968 GGACGAACCAAACTTGTGCT 58.978 50.000 0.00 0.00 38.79 4.40
3401 3994 1.021968 AGGACGAACCAAACTTGTGC 58.978 50.000 0.00 0.00 42.04 4.57
3402 3995 3.119637 ACAAAGGACGAACCAAACTTGTG 60.120 43.478 0.00 0.00 42.04 3.33
3403 3996 3.086282 ACAAAGGACGAACCAAACTTGT 58.914 40.909 0.00 0.00 42.04 3.16
3404 3997 3.775661 ACAAAGGACGAACCAAACTTG 57.224 42.857 0.00 0.00 42.04 3.16
3405 3998 4.794278 AAACAAAGGACGAACCAAACTT 57.206 36.364 0.00 0.00 42.04 2.66
3406 3999 5.393352 GGTTAAACAAAGGACGAACCAAACT 60.393 40.000 0.00 0.00 42.04 2.66
3407 4000 4.799949 GGTTAAACAAAGGACGAACCAAAC 59.200 41.667 0.00 0.00 42.04 2.93
3408 4001 4.438472 CGGTTAAACAAAGGACGAACCAAA 60.438 41.667 0.00 0.00 42.04 3.28
3409 4002 3.065095 CGGTTAAACAAAGGACGAACCAA 59.935 43.478 0.00 0.00 42.04 3.67
3410 4003 2.613133 CGGTTAAACAAAGGACGAACCA 59.387 45.455 0.00 0.00 42.04 3.67
3411 4004 2.871633 TCGGTTAAACAAAGGACGAACC 59.128 45.455 0.00 0.00 39.35 3.62
3412 4005 4.534794 TTCGGTTAAACAAAGGACGAAC 57.465 40.909 0.00 0.00 34.47 3.95
3413 4006 3.937706 TGTTCGGTTAAACAAAGGACGAA 59.062 39.130 0.00 0.00 36.25 3.85
3414 4007 3.529533 TGTTCGGTTAAACAAAGGACGA 58.470 40.909 0.00 0.00 36.25 4.20
3415 4008 3.948196 TGTTCGGTTAAACAAAGGACG 57.052 42.857 0.00 0.00 36.25 4.79
3416 4009 5.427036 TCATGTTCGGTTAAACAAAGGAC 57.573 39.130 0.00 0.00 42.10 3.85
3417 4010 6.263392 TCATTCATGTTCGGTTAAACAAAGGA 59.737 34.615 0.00 0.00 42.10 3.36
3418 4011 6.442952 TCATTCATGTTCGGTTAAACAAAGG 58.557 36.000 0.00 0.00 42.10 3.11
3419 4012 7.922505 TTCATTCATGTTCGGTTAAACAAAG 57.077 32.000 0.00 0.00 42.10 2.77
3420 4013 8.138074 TGATTCATTCATGTTCGGTTAAACAAA 58.862 29.630 0.00 0.00 42.10 2.83
3421 4014 7.652727 TGATTCATTCATGTTCGGTTAAACAA 58.347 30.769 0.00 0.00 42.10 2.83
3422 4015 7.208225 TGATTCATTCATGTTCGGTTAAACA 57.792 32.000 0.00 0.00 42.92 2.83
3423 4016 8.687824 AATGATTCATTCATGTTCGGTTAAAC 57.312 30.769 6.06 0.00 44.51 2.01
3424 4017 8.909708 GAATGATTCATTCATGTTCGGTTAAA 57.090 30.769 26.99 0.00 46.50 1.52
3444 4037 3.493129 CAGACGAAACAAAGGACGAATGA 59.507 43.478 0.00 0.00 0.00 2.57
3457 4050 7.072030 GGATGCATATTATTGTCAGACGAAAC 58.928 38.462 0.00 0.00 0.00 2.78
3461 4054 6.203530 ACTTGGATGCATATTATTGTCAGACG 59.796 38.462 0.00 0.00 0.00 4.18
3473 4070 8.523915 TGTTTTTATGAGACTTGGATGCATAT 57.476 30.769 0.00 0.00 0.00 1.78
3483 4080 6.863126 CCTTGCGATTTGTTTTTATGAGACTT 59.137 34.615 0.00 0.00 0.00 3.01
3485 4082 5.572896 CCCTTGCGATTTGTTTTTATGAGAC 59.427 40.000 0.00 0.00 0.00 3.36
3486 4083 5.475220 TCCCTTGCGATTTGTTTTTATGAGA 59.525 36.000 0.00 0.00 0.00 3.27
3487 4084 5.708948 TCCCTTGCGATTTGTTTTTATGAG 58.291 37.500 0.00 0.00 0.00 2.90
3497 4105 4.708726 AGAAAAGATCCCTTGCGATTTG 57.291 40.909 0.00 0.00 31.91 2.32
3501 4109 4.695455 CAGTTAAGAAAAGATCCCTTGCGA 59.305 41.667 0.00 0.00 31.91 5.10
3502 4110 4.695455 TCAGTTAAGAAAAGATCCCTTGCG 59.305 41.667 0.00 0.00 31.91 4.85
3503 4111 6.382608 GTTCAGTTAAGAAAAGATCCCTTGC 58.617 40.000 0.00 0.00 31.91 4.01
3504 4112 6.717084 AGGTTCAGTTAAGAAAAGATCCCTTG 59.283 38.462 0.00 0.00 31.91 3.61
3505 4113 6.717084 CAGGTTCAGTTAAGAAAAGATCCCTT 59.283 38.462 0.00 0.00 0.00 3.95
3506 4114 6.241645 CAGGTTCAGTTAAGAAAAGATCCCT 58.758 40.000 0.00 0.00 0.00 4.20
3507 4115 5.416013 CCAGGTTCAGTTAAGAAAAGATCCC 59.584 44.000 0.00 0.00 0.00 3.85
3518 4131 5.715439 ATGATCCATCCAGGTTCAGTTAA 57.285 39.130 0.00 0.00 46.47 2.01
3542 4155 7.224753 ACAGTATTATCAGGCTAACAAATGTCG 59.775 37.037 0.00 0.00 0.00 4.35
3545 4158 7.134815 GCACAGTATTATCAGGCTAACAAATG 58.865 38.462 0.00 0.00 0.00 2.32
3548 4161 5.739959 TGCACAGTATTATCAGGCTAACAA 58.260 37.500 0.00 0.00 0.00 2.83
3549 4162 5.351948 TGCACAGTATTATCAGGCTAACA 57.648 39.130 0.00 0.00 0.00 2.41
3550 4163 5.409826 GGATGCACAGTATTATCAGGCTAAC 59.590 44.000 0.00 0.00 0.00 2.34
3552 4165 4.592778 TGGATGCACAGTATTATCAGGCTA 59.407 41.667 0.00 0.00 0.00 3.93
3565 4178 2.483106 CAGTGTTCTCTTGGATGCACAG 59.517 50.000 0.00 0.00 34.75 3.66
3566 4179 2.497138 CAGTGTTCTCTTGGATGCACA 58.503 47.619 0.00 0.00 34.75 4.57
3604 4417 5.228945 TCGAAAAGATCCCTTCAGAGTTT 57.771 39.130 5.50 0.00 0.00 2.66
3611 4424 3.939066 TCAGGTTCGAAAAGATCCCTTC 58.061 45.455 0.00 0.00 39.10 3.46
3616 4429 7.076842 TGATTCATTCAGGTTCGAAAAGATC 57.923 36.000 0.00 0.00 0.00 2.75
3647 4460 8.743714 GGAAGTCCAATGATGTTCTAGAAAAAT 58.256 33.333 6.78 4.16 35.64 1.82
3653 4466 5.102953 TGGGAAGTCCAATGATGTTCTAG 57.897 43.478 0.00 0.00 43.84 2.43
3677 4490 4.816925 GGATTGCTAGTTCTGTATTCCCAC 59.183 45.833 0.00 0.00 0.00 4.61
3681 4494 4.745620 GGACGGATTGCTAGTTCTGTATTC 59.254 45.833 4.56 0.00 31.68 1.75
3682 4495 4.161565 TGGACGGATTGCTAGTTCTGTATT 59.838 41.667 4.56 0.00 31.68 1.89
3685 4498 1.899814 TGGACGGATTGCTAGTTCTGT 59.100 47.619 4.30 4.30 34.19 3.41
3686 4499 2.672961 TGGACGGATTGCTAGTTCTG 57.327 50.000 0.00 0.00 0.00 3.02
3687 4500 3.695830 TTTGGACGGATTGCTAGTTCT 57.304 42.857 0.00 0.00 0.00 3.01
3688 4501 4.759516 TTTTTGGACGGATTGCTAGTTC 57.240 40.909 0.00 0.00 0.00 3.01
3689 4502 6.127730 CCTTATTTTTGGACGGATTGCTAGTT 60.128 38.462 0.00 0.00 0.00 2.24
3690 4503 5.357032 CCTTATTTTTGGACGGATTGCTAGT 59.643 40.000 0.00 0.00 0.00 2.57
3691 4504 5.221048 CCCTTATTTTTGGACGGATTGCTAG 60.221 44.000 0.00 0.00 0.00 3.42
3692 4505 4.642885 CCCTTATTTTTGGACGGATTGCTA 59.357 41.667 0.00 0.00 0.00 3.49
3693 4506 3.447229 CCCTTATTTTTGGACGGATTGCT 59.553 43.478 0.00 0.00 0.00 3.91
3694 4507 3.430236 CCCCTTATTTTTGGACGGATTGC 60.430 47.826 0.00 0.00 0.00 3.56
3695 4508 3.767131 ACCCCTTATTTTTGGACGGATTG 59.233 43.478 0.00 0.00 0.00 2.67
3696 4509 4.055710 ACCCCTTATTTTTGGACGGATT 57.944 40.909 0.00 0.00 0.00 3.01
3697 4510 3.750501 ACCCCTTATTTTTGGACGGAT 57.249 42.857 0.00 0.00 0.00 4.18
3698 4511 4.866327 ATACCCCTTATTTTTGGACGGA 57.134 40.909 0.00 0.00 0.00 4.69
3699 4512 8.873186 AATATATACCCCTTATTTTTGGACGG 57.127 34.615 0.00 0.00 0.00 4.79
3709 4522 8.966501 ACTTTGGACCAAATATATACCCCTTAT 58.033 33.333 19.87 0.00 32.70 1.73
3710 4523 8.352808 ACTTTGGACCAAATATATACCCCTTA 57.647 34.615 19.87 0.00 32.70 2.69
3715 4528 8.126700 CGTTTGACTTTGGACCAAATATATACC 58.873 37.037 19.87 5.53 32.70 2.73
3721 4534 4.208746 ACCGTTTGACTTTGGACCAAATA 58.791 39.130 19.87 7.28 32.70 1.40
3726 4539 5.945466 TTTATACCGTTTGACTTTGGACC 57.055 39.130 0.00 0.00 0.00 4.46
3729 4542 8.804688 TCAAATTTTATACCGTTTGACTTTGG 57.195 30.769 0.00 0.00 36.11 3.28
3730 4543 9.458374 ACTCAAATTTTATACCGTTTGACTTTG 57.542 29.630 0.00 0.00 36.11 2.77
3761 4574 8.512138 GCTTGCTCTTACTAATTTTTCCTACAA 58.488 33.333 0.00 0.00 0.00 2.41
3762 4575 7.663905 TGCTTGCTCTTACTAATTTTTCCTACA 59.336 33.333 0.00 0.00 0.00 2.74
3764 4577 7.663905 TGTGCTTGCTCTTACTAATTTTTCCTA 59.336 33.333 0.00 0.00 0.00 2.94
3765 4578 6.490040 TGTGCTTGCTCTTACTAATTTTTCCT 59.510 34.615 0.00 0.00 0.00 3.36
3766 4579 6.677913 TGTGCTTGCTCTTACTAATTTTTCC 58.322 36.000 0.00 0.00 0.00 3.13
3768 4581 7.599998 CCATTGTGCTTGCTCTTACTAATTTTT 59.400 33.333 0.00 0.00 0.00 1.94
3770 4583 6.624423 CCATTGTGCTTGCTCTTACTAATTT 58.376 36.000 0.00 0.00 0.00 1.82
3775 4588 1.815003 GCCATTGTGCTTGCTCTTACT 59.185 47.619 0.00 0.00 0.00 2.24
3776 4589 1.541147 TGCCATTGTGCTTGCTCTTAC 59.459 47.619 0.00 0.00 0.00 2.34
3778 4591 0.601558 CTGCCATTGTGCTTGCTCTT 59.398 50.000 0.00 0.00 0.00 2.85
3779 4592 1.248785 CCTGCCATTGTGCTTGCTCT 61.249 55.000 0.00 0.00 0.00 4.09
3781 4594 2.939261 GCCTGCCATTGTGCTTGCT 61.939 57.895 0.00 0.00 0.00 3.91
3783 4596 2.263540 GGCCTGCCATTGTGCTTG 59.736 61.111 2.58 0.00 35.81 4.01
3789 4602 2.440065 TAAGCGGGCCTGCCATTG 60.440 61.111 33.20 0.16 37.98 2.82
3791 4604 3.060614 ATGTAAGCGGGCCTGCCAT 62.061 57.895 33.20 24.76 37.98 4.40
3792 4605 3.727258 ATGTAAGCGGGCCTGCCA 61.727 61.111 33.20 23.61 37.98 4.92
3794 4607 3.211963 CCATGTAAGCGGGCCTGC 61.212 66.667 30.15 30.15 0.00 4.85
3795 4608 3.211963 GCCATGTAAGCGGGCCTG 61.212 66.667 7.41 7.41 41.90 4.85
3799 4612 0.593128 GCTATTGCCATGTAAGCGGG 59.407 55.000 0.00 0.00 0.00 6.13
3800 4613 1.265095 CAGCTATTGCCATGTAAGCGG 59.735 52.381 0.00 0.00 40.80 5.52
3801 4614 2.212652 TCAGCTATTGCCATGTAAGCG 58.787 47.619 0.00 0.00 40.80 4.68
3802 4615 2.551459 CCTCAGCTATTGCCATGTAAGC 59.449 50.000 0.00 0.00 40.80 3.09
3803 4616 3.812053 GTCCTCAGCTATTGCCATGTAAG 59.188 47.826 0.00 0.00 40.80 2.34
3804 4617 3.455910 AGTCCTCAGCTATTGCCATGTAA 59.544 43.478 0.00 0.00 40.80 2.41
3806 4619 1.842562 AGTCCTCAGCTATTGCCATGT 59.157 47.619 0.00 0.00 40.80 3.21
3807 4620 2.617308 CAAGTCCTCAGCTATTGCCATG 59.383 50.000 0.00 0.00 40.80 3.66
3808 4621 2.240667 ACAAGTCCTCAGCTATTGCCAT 59.759 45.455 0.00 0.00 40.80 4.40
3809 4622 1.630369 ACAAGTCCTCAGCTATTGCCA 59.370 47.619 0.00 0.00 40.80 4.92
3810 4623 2.093235 AGACAAGTCCTCAGCTATTGCC 60.093 50.000 0.00 0.00 40.80 4.52
3812 4625 5.618640 GCAAAAGACAAGTCCTCAGCTATTG 60.619 44.000 0.00 0.00 0.00 1.90
3813 4626 4.457257 GCAAAAGACAAGTCCTCAGCTATT 59.543 41.667 0.00 0.00 0.00 1.73
3815 4628 3.403038 GCAAAAGACAAGTCCTCAGCTA 58.597 45.455 0.00 0.00 0.00 3.32
3817 4630 1.069636 CGCAAAAGACAAGTCCTCAGC 60.070 52.381 0.00 0.00 0.00 4.26
3818 4631 2.032549 CACGCAAAAGACAAGTCCTCAG 60.033 50.000 0.00 0.00 0.00 3.35
3820 4633 2.032808 GTCACGCAAAAGACAAGTCCTC 60.033 50.000 0.00 0.00 34.93 3.71
3822 4635 1.668751 TGTCACGCAAAAGACAAGTCC 59.331 47.619 0.00 0.00 41.42 3.85
3823 4636 3.398954 TTGTCACGCAAAAGACAAGTC 57.601 42.857 4.07 0.00 46.46 3.01
3827 4640 6.027131 GCATAATATTGTCACGCAAAAGACA 58.973 36.000 0.00 0.00 42.55 3.41
3828 4641 6.021468 GTGCATAATATTGTCACGCAAAAGAC 60.021 38.462 0.00 0.00 40.91 3.01
3831 4644 5.098893 GGTGCATAATATTGTCACGCAAAA 58.901 37.500 0.00 0.00 40.91 2.44
3832 4645 4.439426 GGGTGCATAATATTGTCACGCAAA 60.439 41.667 19.10 0.00 40.91 3.68
3833 4646 3.066064 GGGTGCATAATATTGTCACGCAA 59.934 43.478 19.10 0.00 41.89 4.85
3835 4648 2.616376 TGGGTGCATAATATTGTCACGC 59.384 45.455 18.08 18.08 37.24 5.34
3836 4649 4.574421 TCTTGGGTGCATAATATTGTCACG 59.426 41.667 0.00 0.00 0.00 4.35
3837 4650 6.449635 TTCTTGGGTGCATAATATTGTCAC 57.550 37.500 0.00 3.49 0.00 3.67
3838 4651 6.405731 GCTTTCTTGGGTGCATAATATTGTCA 60.406 38.462 0.00 0.00 0.00 3.58
3839 4652 5.979517 GCTTTCTTGGGTGCATAATATTGTC 59.020 40.000 0.00 0.00 0.00 3.18
3840 4653 5.658190 AGCTTTCTTGGGTGCATAATATTGT 59.342 36.000 0.00 0.00 0.00 2.71
3841 4654 6.040166 AGAGCTTTCTTGGGTGCATAATATTG 59.960 38.462 0.00 0.00 0.00 1.90
3842 4655 6.040166 CAGAGCTTTCTTGGGTGCATAATATT 59.960 38.462 0.00 0.00 0.00 1.28
3843 4656 5.533903 CAGAGCTTTCTTGGGTGCATAATAT 59.466 40.000 0.00 0.00 0.00 1.28
3844 4657 4.883585 CAGAGCTTTCTTGGGTGCATAATA 59.116 41.667 0.00 0.00 0.00 0.98
3845 4658 3.698040 CAGAGCTTTCTTGGGTGCATAAT 59.302 43.478 0.00 0.00 0.00 1.28
3846 4659 3.084039 CAGAGCTTTCTTGGGTGCATAA 58.916 45.455 0.00 0.00 0.00 1.90
3847 4660 2.305635 TCAGAGCTTTCTTGGGTGCATA 59.694 45.455 0.00 0.00 0.00 3.14
3848 4661 1.074405 TCAGAGCTTTCTTGGGTGCAT 59.926 47.619 0.00 0.00 0.00 3.96
3849 4662 0.473755 TCAGAGCTTTCTTGGGTGCA 59.526 50.000 0.00 0.00 0.00 4.57
3850 4663 1.609208 TTCAGAGCTTTCTTGGGTGC 58.391 50.000 0.00 0.00 0.00 5.01
3851 4664 3.683802 AGATTCAGAGCTTTCTTGGGTG 58.316 45.455 0.00 0.00 0.00 4.61
3852 4665 3.328931 TGAGATTCAGAGCTTTCTTGGGT 59.671 43.478 0.00 0.00 0.00 4.51
3854 4667 7.621428 TTTATGAGATTCAGAGCTTTCTTGG 57.379 36.000 0.00 0.00 0.00 3.61
3890 4863 6.348295 GGGTTCAGTTAAGAAAAGATCCGTTC 60.348 42.308 0.00 0.00 0.00 3.95
3893 4866 4.092968 CGGGTTCAGTTAAGAAAAGATCCG 59.907 45.833 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.