Multiple sequence alignment - TraesCS3A01G377500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G377500 | chr3A | 100.000 | 5468 | 0 | 0 | 1 | 5468 | 627269673 | 627275140 | 0.000000e+00 | 10098.0 |
1 | TraesCS3A01G377500 | chr3D | 89.824 | 2329 | 153 | 44 | 1 | 2306 | 484339981 | 484342248 | 0.000000e+00 | 2911.0 |
2 | TraesCS3A01G377500 | chr3D | 89.504 | 1210 | 61 | 32 | 3550 | 4727 | 484343205 | 484344380 | 0.000000e+00 | 1471.0 |
3 | TraesCS3A01G377500 | chr3D | 94.008 | 968 | 15 | 7 | 2562 | 3493 | 484342245 | 484343205 | 0.000000e+00 | 1426.0 |
4 | TraesCS3A01G377500 | chr3D | 83.893 | 745 | 47 | 24 | 4762 | 5468 | 484344378 | 484345087 | 1.280000e-180 | 643.0 |
5 | TraesCS3A01G377500 | chr3B | 86.340 | 1962 | 155 | 53 | 1 | 1940 | 647169931 | 647171801 | 0.000000e+00 | 2034.0 |
6 | TraesCS3A01G377500 | chr3B | 82.749 | 1368 | 125 | 46 | 2562 | 3876 | 647171996 | 647173305 | 0.000000e+00 | 1116.0 |
7 | TraesCS3A01G377500 | chr3B | 88.146 | 329 | 30 | 7 | 958 | 1286 | 290615134 | 290615453 | 3.090000e-102 | 383.0 |
8 | TraesCS3A01G377500 | chr3B | 81.514 | 449 | 41 | 20 | 4290 | 4727 | 647176362 | 647176779 | 1.140000e-86 | 331.0 |
9 | TraesCS3A01G377500 | chr3B | 81.498 | 454 | 37 | 23 | 4762 | 5197 | 647176777 | 647177201 | 4.080000e-86 | 329.0 |
10 | TraesCS3A01G377500 | chr3B | 78.151 | 238 | 38 | 9 | 4187 | 4418 | 456403503 | 456403732 | 7.390000e-29 | 139.0 |
11 | TraesCS3A01G377500 | chr5D | 90.274 | 329 | 23 | 6 | 958 | 1286 | 79988055 | 79988374 | 6.550000e-114 | 422.0 |
12 | TraesCS3A01G377500 | chr6D | 94.595 | 259 | 14 | 0 | 2303 | 2561 | 71936308 | 71936566 | 8.530000e-108 | 401.0 |
13 | TraesCS3A01G377500 | chr6D | 90.370 | 270 | 24 | 1 | 2302 | 2571 | 402325321 | 402325054 | 2.420000e-93 | 353.0 |
14 | TraesCS3A01G377500 | chr6D | 88.971 | 272 | 25 | 3 | 1015 | 1286 | 294698274 | 294698008 | 1.140000e-86 | 331.0 |
15 | TraesCS3A01G377500 | chr6A | 88.822 | 331 | 28 | 6 | 957 | 1286 | 251475484 | 251475162 | 1.100000e-106 | 398.0 |
16 | TraesCS3A01G377500 | chr6A | 87.842 | 329 | 31 | 7 | 958 | 1286 | 252021073 | 252021392 | 1.440000e-100 | 377.0 |
17 | TraesCS3A01G377500 | chr5A | 93.130 | 262 | 18 | 0 | 2303 | 2564 | 703663792 | 703664053 | 8.590000e-103 | 385.0 |
18 | TraesCS3A01G377500 | chr5A | 92.520 | 254 | 17 | 1 | 2304 | 2555 | 388577929 | 388578182 | 4.030000e-96 | 363.0 |
19 | TraesCS3A01G377500 | chr5A | 90.000 | 270 | 27 | 0 | 2299 | 2568 | 52281421 | 52281152 | 3.130000e-92 | 350.0 |
20 | TraesCS3A01G377500 | chr7A | 92.193 | 269 | 15 | 1 | 2304 | 2566 | 119605109 | 119604841 | 5.170000e-100 | 375.0 |
21 | TraesCS3A01G377500 | chr7A | 87.037 | 162 | 20 | 1 | 1097 | 1258 | 397428945 | 397428785 | 1.210000e-41 | 182.0 |
22 | TraesCS3A01G377500 | chrUn | 92.366 | 262 | 20 | 0 | 2303 | 2564 | 218391834 | 218391573 | 1.860000e-99 | 374.0 |
23 | TraesCS3A01G377500 | chr4A | 91.852 | 270 | 19 | 2 | 2304 | 2570 | 31397198 | 31396929 | 1.860000e-99 | 374.0 |
24 | TraesCS3A01G377500 | chr7B | 91.221 | 262 | 23 | 0 | 2303 | 2564 | 173229782 | 173229521 | 1.870000e-94 | 357.0 |
25 | TraesCS3A01G377500 | chr7B | 97.101 | 207 | 6 | 0 | 1 | 207 | 63935182 | 63935388 | 3.130000e-92 | 350.0 |
26 | TraesCS3A01G377500 | chr7B | 88.364 | 275 | 27 | 3 | 1012 | 1286 | 601441486 | 601441755 | 5.280000e-85 | 326.0 |
27 | TraesCS3A01G377500 | chr7B | 75.207 | 121 | 24 | 3 | 4298 | 4418 | 52564860 | 52564974 | 1.000000e-02 | 52.8 |
28 | TraesCS3A01G377500 | chr1A | 96.698 | 212 | 6 | 1 | 1 | 211 | 468598993 | 468598782 | 8.710000e-93 | 351.0 |
29 | TraesCS3A01G377500 | chr1A | 97.101 | 207 | 6 | 0 | 1 | 207 | 400975143 | 400974937 | 3.130000e-92 | 350.0 |
30 | TraesCS3A01G377500 | chr1A | 78.414 | 227 | 36 | 10 | 4197 | 4418 | 384314320 | 384314102 | 9.550000e-28 | 135.0 |
31 | TraesCS3A01G377500 | chr1B | 97.101 | 207 | 6 | 0 | 1 | 207 | 434409288 | 434409494 | 3.130000e-92 | 350.0 |
32 | TraesCS3A01G377500 | chr1B | 97.101 | 207 | 6 | 0 | 1 | 207 | 434422991 | 434422785 | 3.130000e-92 | 350.0 |
33 | TraesCS3A01G377500 | chr2A | 96.209 | 211 | 7 | 1 | 1 | 211 | 619760725 | 619760934 | 1.460000e-90 | 344.0 |
34 | TraesCS3A01G377500 | chr1D | 96.618 | 207 | 7 | 0 | 1 | 207 | 321640874 | 321641080 | 1.460000e-90 | 344.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G377500 | chr3A | 627269673 | 627275140 | 5467 | False | 10098.00 | 10098 | 100.00000 | 1 | 5468 | 1 | chr3A.!!$F1 | 5467 |
1 | TraesCS3A01G377500 | chr3D | 484339981 | 484345087 | 5106 | False | 1612.75 | 2911 | 89.30725 | 1 | 5468 | 4 | chr3D.!!$F1 | 5467 |
2 | TraesCS3A01G377500 | chr3B | 647169931 | 647177201 | 7270 | False | 952.50 | 2034 | 83.02525 | 1 | 5197 | 4 | chr3B.!!$F3 | 5196 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
500 | 502 | 0.036022 | AAGCAGAGGAAGAGCACCAC | 59.964 | 55.000 | 0.00 | 0.0 | 0.00 | 4.16 | F |
1428 | 1445 | 0.266152 | AGCCTGTAGCCCTATCTGGT | 59.734 | 55.000 | 0.00 | 0.0 | 45.47 | 4.00 | F |
2320 | 2366 | 0.115745 | TGTACTCCCTCCGGTCCTTT | 59.884 | 55.000 | 0.00 | 0.0 | 0.00 | 3.11 | F |
2330 | 2376 | 1.070445 | TCCGGTCCTTTTTAGTTCGCA | 59.930 | 47.619 | 0.00 | 0.0 | 0.00 | 5.10 | F |
2556 | 2602 | 1.695242 | TGCAGAGTAAAAAGGACCGGA | 59.305 | 47.619 | 9.46 | 0.0 | 0.00 | 5.14 | F |
3348 | 3437 | 2.136298 | TTTCACTGTGGAACTTGCCA | 57.864 | 45.000 | 8.11 | 0.0 | 38.04 | 4.92 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2259 | 2305 | 0.029300 | ACTGCATGACAACAACGTGC | 59.971 | 50.0 | 0.00 | 0.0 | 46.45 | 5.34 | R |
2550 | 2596 | 0.034283 | AGACTGTACTCCCTCCGGTC | 60.034 | 60.0 | 0.00 | 0.0 | 35.23 | 4.79 | R |
4193 | 7012 | 0.112218 | TGCCTTAAGAGCCCTTTGCA | 59.888 | 50.0 | 3.36 | 0.0 | 44.83 | 4.08 | R |
4282 | 7105 | 0.238289 | CAGCAAGTTACAAGGGCACG | 59.762 | 55.0 | 0.00 | 0.0 | 0.00 | 5.34 | R |
4283 | 7106 | 1.604604 | TCAGCAAGTTACAAGGGCAC | 58.395 | 50.0 | 0.00 | 0.0 | 0.00 | 5.01 | R |
4734 | 7567 | 0.178068 | GCGCAGGGAGAAACCATCTA | 59.822 | 55.0 | 0.30 | 0.0 | 38.96 | 1.98 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
133 | 134 | 2.031163 | GACACCAACCTCTGCGCT | 59.969 | 61.111 | 9.73 | 0.00 | 0.00 | 5.92 |
245 | 246 | 1.330779 | CGTGCGTTGTCAGAGAGTCG | 61.331 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
247 | 248 | 0.317854 | TGCGTTGTCAGAGAGTCGTG | 60.318 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
263 | 264 | 1.626654 | CGTGCTGTGATGTTCCGGTC | 61.627 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
265 | 266 | 0.396435 | TGCTGTGATGTTCCGGTCTT | 59.604 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
283 | 285 | 2.233922 | TCTTAGAGCTTGGTGGTGTAGC | 59.766 | 50.000 | 0.00 | 0.00 | 35.16 | 3.58 |
313 | 315 | 3.173240 | GTCCGCTCTCGTCGTTGC | 61.173 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
329 | 331 | 1.338020 | GTTGCCTTGCCATATGTAGCC | 59.662 | 52.381 | 1.24 | 0.00 | 0.00 | 3.93 |
369 | 371 | 7.792374 | TTATCAATGAAGAGTGCAGTTATCC | 57.208 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
383 | 385 | 6.309980 | GTGCAGTTATCCTCATATGAATCTCG | 59.690 | 42.308 | 6.90 | 0.00 | 0.00 | 4.04 |
395 | 397 | 4.910746 | ATGAATCTCGTTTCAGTGTTCG | 57.089 | 40.909 | 0.00 | 0.00 | 38.90 | 3.95 |
401 | 403 | 4.889241 | TCTCGTTTCAGTGTTCGTTTTTC | 58.111 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
402 | 404 | 4.628333 | TCTCGTTTCAGTGTTCGTTTTTCT | 59.372 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
403 | 405 | 4.643953 | TCGTTTCAGTGTTCGTTTTTCTG | 58.356 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
404 | 406 | 4.389382 | TCGTTTCAGTGTTCGTTTTTCTGA | 59.611 | 37.500 | 0.00 | 0.00 | 34.08 | 3.27 |
405 | 407 | 5.083389 | CGTTTCAGTGTTCGTTTTTCTGAA | 58.917 | 37.500 | 0.00 | 0.00 | 41.36 | 3.02 |
406 | 408 | 5.737290 | CGTTTCAGTGTTCGTTTTTCTGAAT | 59.263 | 36.000 | 6.72 | 0.00 | 42.18 | 2.57 |
408 | 410 | 6.677781 | TTCAGTGTTCGTTTTTCTGAATCT | 57.322 | 33.333 | 0.00 | 0.00 | 39.27 | 2.40 |
409 | 411 | 6.287107 | TCAGTGTTCGTTTTTCTGAATCTC | 57.713 | 37.500 | 0.00 | 0.00 | 33.18 | 2.75 |
410 | 412 | 5.815222 | TCAGTGTTCGTTTTTCTGAATCTCA | 59.185 | 36.000 | 0.00 | 0.00 | 33.18 | 3.27 |
416 | 418 | 7.857389 | TGTTCGTTTTTCTGAATCTCATTTCTG | 59.143 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
418 | 420 | 7.930217 | TCGTTTTTCTGAATCTCATTTCTGTT | 58.070 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
419 | 421 | 7.857389 | TCGTTTTTCTGAATCTCATTTCTGTTG | 59.143 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
424 | 426 | 6.479006 | TCTGAATCTCATTTCTGTTGGATGT | 58.521 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
431 | 433 | 5.620206 | TCATTTCTGTTGGATGTGTACTGT | 58.380 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
432 | 434 | 5.700832 | TCATTTCTGTTGGATGTGTACTGTC | 59.299 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
435 | 437 | 5.290493 | TCTGTTGGATGTGTACTGTCTTT | 57.710 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
436 | 438 | 5.297547 | TCTGTTGGATGTGTACTGTCTTTC | 58.702 | 41.667 | 0.00 | 0.00 | 0.00 | 2.62 |
467 | 469 | 3.927142 | AGTTTCGTTGTCTAGCTGTATGC | 59.073 | 43.478 | 0.00 | 0.00 | 43.29 | 3.14 |
496 | 498 | 1.051008 | TGTGAAGCAGAGGAAGAGCA | 58.949 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
498 | 500 | 0.322975 | TGAAGCAGAGGAAGAGCACC | 59.677 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
499 | 501 | 0.322975 | GAAGCAGAGGAAGAGCACCA | 59.677 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
500 | 502 | 0.036022 | AAGCAGAGGAAGAGCACCAC | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
515 | 517 | 2.350772 | GCACCACTGCCGCATAATAATC | 60.351 | 50.000 | 0.00 | 0.00 | 37.45 | 1.75 |
523 | 525 | 3.684305 | TGCCGCATAATAATCTTCATCCG | 59.316 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
532 | 534 | 9.979270 | CATAATAATCTTCATCCGTTGATTAGC | 57.021 | 33.333 | 0.00 | 0.00 | 35.66 | 3.09 |
534 | 536 | 3.194005 | TCTTCATCCGTTGATTAGCCC | 57.806 | 47.619 | 0.00 | 0.00 | 33.34 | 5.19 |
535 | 537 | 2.158813 | TCTTCATCCGTTGATTAGCCCC | 60.159 | 50.000 | 0.00 | 0.00 | 33.34 | 5.80 |
537 | 539 | 1.843851 | TCATCCGTTGATTAGCCCCTT | 59.156 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
552 | 554 | 0.740737 | CCCTTCCGTCATTGGATTGC | 59.259 | 55.000 | 0.00 | 0.00 | 38.00 | 3.56 |
553 | 555 | 0.378257 | CCTTCCGTCATTGGATTGCG | 59.622 | 55.000 | 0.00 | 0.00 | 38.00 | 4.85 |
554 | 556 | 1.086696 | CTTCCGTCATTGGATTGCGT | 58.913 | 50.000 | 0.00 | 0.00 | 38.00 | 5.24 |
565 | 567 | 1.000145 | GGATTGCGTCCTTCGTCTTC | 59.000 | 55.000 | 0.91 | 0.00 | 44.16 | 2.87 |
573 | 578 | 2.683867 | CGTCCTTCGTCTTCCACTCTAT | 59.316 | 50.000 | 0.00 | 0.00 | 34.52 | 1.98 |
578 | 583 | 7.095270 | GTCCTTCGTCTTCCACTCTATTTTAA | 58.905 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
581 | 586 | 8.604890 | CCTTCGTCTTCCACTCTATTTTAATTC | 58.395 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
614 | 619 | 9.465985 | TTTTTCTTAATTTTCGGATGGTGTTAC | 57.534 | 29.630 | 0.00 | 0.00 | 0.00 | 2.50 |
615 | 620 | 6.411630 | TCTTAATTTTCGGATGGTGTTACG | 57.588 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
616 | 621 | 3.481112 | AATTTTCGGATGGTGTTACGC | 57.519 | 42.857 | 0.00 | 0.00 | 0.00 | 4.42 |
636 | 642 | 3.204526 | GCTGATGGAGATGAAGAACAGG | 58.795 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
645 | 651 | 2.509336 | AAGAACAGGATCGCCGCG | 60.509 | 61.111 | 6.39 | 6.39 | 39.96 | 6.46 |
655 | 661 | 0.304705 | GATCGCCGCGTCATGATTTT | 59.695 | 50.000 | 13.39 | 0.00 | 0.00 | 1.82 |
660 | 666 | 0.999406 | CCGCGTCATGATTTTCGTCT | 59.001 | 50.000 | 4.92 | 0.00 | 0.00 | 4.18 |
661 | 667 | 1.005975 | CCGCGTCATGATTTTCGTCTC | 60.006 | 52.381 | 4.92 | 0.00 | 0.00 | 3.36 |
662 | 668 | 1.653609 | CGCGTCATGATTTTCGTCTCA | 59.346 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
663 | 669 | 2.532973 | CGCGTCATGATTTTCGTCTCAC | 60.533 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
664 | 670 | 2.222819 | GCGTCATGATTTTCGTCTCACC | 60.223 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
665 | 671 | 2.028045 | CGTCATGATTTTCGTCTCACCG | 59.972 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
667 | 673 | 2.993220 | TCATGATTTTCGTCTCACCGTG | 59.007 | 45.455 | 0.00 | 0.00 | 0.00 | 4.94 |
668 | 674 | 1.790755 | TGATTTTCGTCTCACCGTGG | 58.209 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
669 | 675 | 1.069513 | TGATTTTCGTCTCACCGTGGT | 59.930 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
670 | 676 | 2.140717 | GATTTTCGTCTCACCGTGGTT | 58.859 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
671 | 677 | 2.886862 | TTTTCGTCTCACCGTGGTTA | 57.113 | 45.000 | 0.00 | 0.00 | 0.00 | 2.85 |
672 | 678 | 3.389925 | TTTTCGTCTCACCGTGGTTAT | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 1.89 |
673 | 679 | 2.357327 | TTCGTCTCACCGTGGTTATG | 57.643 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
674 | 680 | 1.250328 | TCGTCTCACCGTGGTTATGT | 58.750 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
675 | 681 | 1.614903 | TCGTCTCACCGTGGTTATGTT | 59.385 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
678 | 684 | 3.135994 | GTCTCACCGTGGTTATGTTGTT | 58.864 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
679 | 685 | 3.185797 | GTCTCACCGTGGTTATGTTGTTC | 59.814 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
680 | 686 | 2.482721 | CTCACCGTGGTTATGTTGTTCC | 59.517 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
681 | 687 | 2.158798 | TCACCGTGGTTATGTTGTTCCA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
683 | 689 | 4.004314 | CACCGTGGTTATGTTGTTCCATA | 58.996 | 43.478 | 0.00 | 0.00 | 32.45 | 2.74 |
684 | 690 | 4.638421 | CACCGTGGTTATGTTGTTCCATAT | 59.362 | 41.667 | 0.00 | 0.00 | 32.45 | 1.78 |
686 | 692 | 5.124776 | ACCGTGGTTATGTTGTTCCATATTG | 59.875 | 40.000 | 0.00 | 0.00 | 32.45 | 1.90 |
687 | 693 | 5.355630 | CCGTGGTTATGTTGTTCCATATTGA | 59.644 | 40.000 | 0.00 | 0.00 | 32.45 | 2.57 |
688 | 694 | 6.458206 | CCGTGGTTATGTTGTTCCATATTGAG | 60.458 | 42.308 | 0.00 | 0.00 | 32.45 | 3.02 |
689 | 695 | 6.315144 | CGTGGTTATGTTGTTCCATATTGAGA | 59.685 | 38.462 | 0.00 | 0.00 | 32.45 | 3.27 |
691 | 697 | 9.337396 | GTGGTTATGTTGTTCCATATTGAGATA | 57.663 | 33.333 | 0.00 | 0.00 | 32.45 | 1.98 |
746 | 753 | 1.005394 | TTTCCAGGTTCTCCGCGTC | 60.005 | 57.895 | 4.92 | 0.00 | 39.05 | 5.19 |
761 | 768 | 3.435186 | GTCTGCCTCTTTGCCGCC | 61.435 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
765 | 772 | 4.416738 | GCCTCTTTGCCGCCTCCT | 62.417 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
1260 | 1271 | 2.823147 | GATCTGCTTGCCGCTGCT | 60.823 | 61.111 | 0.70 | 0.00 | 40.11 | 4.24 |
1330 | 1341 | 2.609491 | GGTTTGGACTGATTTTTCCGGC | 60.609 | 50.000 | 0.00 | 0.00 | 34.24 | 6.13 |
1345 | 1356 | 2.435059 | GGCGGTCAGTCTTCTGCC | 60.435 | 66.667 | 8.38 | 8.38 | 46.60 | 4.85 |
1351 | 1362 | 1.837051 | TCAGTCTTCTGCCACGGGT | 60.837 | 57.895 | 0.00 | 0.00 | 41.10 | 5.28 |
1354 | 1365 | 1.122019 | AGTCTTCTGCCACGGGTCTT | 61.122 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1355 | 1366 | 0.606604 | GTCTTCTGCCACGGGTCTTA | 59.393 | 55.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1357 | 1368 | 0.736325 | CTTCTGCCACGGGTCTTACG | 60.736 | 60.000 | 0.00 | 0.00 | 37.36 | 3.18 |
1388 | 1399 | 2.477245 | TCCTAGAGCAAGGCCAACATA | 58.523 | 47.619 | 5.01 | 0.00 | 36.51 | 2.29 |
1389 | 1400 | 2.843730 | TCCTAGAGCAAGGCCAACATAA | 59.156 | 45.455 | 5.01 | 0.00 | 36.51 | 1.90 |
1392 | 1403 | 3.160679 | AGAGCAAGGCCAACATAAGTT | 57.839 | 42.857 | 5.01 | 0.00 | 38.88 | 2.66 |
1428 | 1445 | 0.266152 | AGCCTGTAGCCCTATCTGGT | 59.734 | 55.000 | 0.00 | 0.00 | 45.47 | 4.00 |
1455 | 1472 | 1.067060 | TCCGATGTGCTGTAGGATTCG | 59.933 | 52.381 | 0.00 | 0.00 | 0.00 | 3.34 |
1461 | 1478 | 1.394917 | GTGCTGTAGGATTCGCACTTG | 59.605 | 52.381 | 6.04 | 0.00 | 46.70 | 3.16 |
1516 | 1534 | 3.873952 | GGCTTGTGATTCTCTGTCCATAC | 59.126 | 47.826 | 0.00 | 0.00 | 0.00 | 2.39 |
1550 | 1568 | 9.934190 | TGATTATGTGACAATATCGACAATTTG | 57.066 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
1571 | 1589 | 3.763360 | TGCATTTGGTGGATTTGACCTAG | 59.237 | 43.478 | 0.00 | 0.00 | 34.26 | 3.02 |
1573 | 1591 | 4.947388 | GCATTTGGTGGATTTGACCTAGTA | 59.053 | 41.667 | 0.00 | 0.00 | 34.26 | 1.82 |
1577 | 1595 | 7.696992 | TTTGGTGGATTTGACCTAGTATTTC | 57.303 | 36.000 | 0.00 | 0.00 | 34.26 | 2.17 |
1578 | 1596 | 5.424757 | TGGTGGATTTGACCTAGTATTTCG | 58.575 | 41.667 | 0.00 | 0.00 | 34.26 | 3.46 |
1579 | 1597 | 4.814771 | GGTGGATTTGACCTAGTATTTCGG | 59.185 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
1599 | 1617 | 3.542680 | CGGTGCTTACGGCGTAATTTAAG | 60.543 | 47.826 | 30.12 | 21.50 | 45.43 | 1.85 |
1606 | 1624 | 0.742505 | GGCGTAATTTAAGCCCCACC | 59.257 | 55.000 | 19.13 | 0.00 | 45.87 | 4.61 |
1625 | 1643 | 4.503991 | CCACCTGCTCCTATTCCTTGTATC | 60.504 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1630 | 1648 | 4.968719 | TGCTCCTATTCCTTGTATCTCCAA | 59.031 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
1650 | 1668 | 4.159135 | CCAATTGATTGCTAGTGCTCCTTT | 59.841 | 41.667 | 7.12 | 0.00 | 40.48 | 3.11 |
1685 | 1703 | 4.148696 | ACTTTGAGCAAATTCATTTTCGCG | 59.851 | 37.500 | 0.00 | 0.00 | 31.09 | 5.87 |
1699 | 1717 | 6.474364 | TCATTTTCGCGTATGTAATTGTGAG | 58.526 | 36.000 | 5.77 | 0.00 | 0.00 | 3.51 |
1700 | 1718 | 6.311690 | TCATTTTCGCGTATGTAATTGTGAGA | 59.688 | 34.615 | 5.77 | 0.00 | 0.00 | 3.27 |
1701 | 1719 | 6.656314 | TTTTCGCGTATGTAATTGTGAGAT | 57.344 | 33.333 | 5.77 | 0.00 | 0.00 | 2.75 |
1703 | 1721 | 3.972502 | TCGCGTATGTAATTGTGAGATCG | 59.027 | 43.478 | 5.77 | 0.00 | 0.00 | 3.69 |
1704 | 1722 | 3.972502 | CGCGTATGTAATTGTGAGATCGA | 59.027 | 43.478 | 0.00 | 0.00 | 0.00 | 3.59 |
1710 | 1729 | 8.158445 | CGTATGTAATTGTGAGATCGAATCATG | 58.842 | 37.037 | 6.93 | 0.00 | 0.00 | 3.07 |
1737 | 1756 | 2.223572 | ACTTTGCCGTTTCTTTGCAGAG | 60.224 | 45.455 | 0.00 | 0.00 | 41.49 | 3.35 |
1746 | 1765 | 4.318831 | CGTTTCTTTGCAGAGTACAAGGTC | 60.319 | 45.833 | 3.90 | 0.00 | 0.00 | 3.85 |
1794 | 1813 | 2.033299 | CGTGGTGGCATTTATGGATGAC | 59.967 | 50.000 | 0.00 | 0.00 | 35.53 | 3.06 |
1913 | 1936 | 9.382275 | GTATCAATTTTTACCAATGCAGGATTT | 57.618 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
1967 | 2013 | 6.240894 | TGAATGCTTCCAGATACAGACTTTT | 58.759 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
1994 | 2040 | 9.486497 | TGAAAATTATTAACAGAAAGCATGCAA | 57.514 | 25.926 | 21.98 | 2.53 | 0.00 | 4.08 |
1995 | 2041 | 9.962759 | GAAAATTATTAACAGAAAGCATGCAAG | 57.037 | 29.630 | 21.98 | 6.88 | 0.00 | 4.01 |
1998 | 2044 | 4.916983 | TTAACAGAAAGCATGCAAGTGT | 57.083 | 36.364 | 21.98 | 14.21 | 0.00 | 3.55 |
2000 | 2046 | 3.088194 | ACAGAAAGCATGCAAGTGTTG | 57.912 | 42.857 | 21.98 | 12.24 | 0.00 | 3.33 |
2001 | 2047 | 2.689471 | ACAGAAAGCATGCAAGTGTTGA | 59.311 | 40.909 | 21.98 | 0.00 | 0.00 | 3.18 |
2002 | 2048 | 3.047796 | CAGAAAGCATGCAAGTGTTGAC | 58.952 | 45.455 | 21.98 | 3.57 | 0.00 | 3.18 |
2005 | 2051 | 1.024271 | AGCATGCAAGTGTTGACGTT | 58.976 | 45.000 | 21.98 | 0.00 | 0.00 | 3.99 |
2006 | 2052 | 2.217750 | AGCATGCAAGTGTTGACGTTA | 58.782 | 42.857 | 21.98 | 0.00 | 0.00 | 3.18 |
2007 | 2053 | 2.032030 | AGCATGCAAGTGTTGACGTTAC | 60.032 | 45.455 | 21.98 | 0.00 | 0.00 | 2.50 |
2008 | 2054 | 2.559872 | CATGCAAGTGTTGACGTTACG | 58.440 | 47.619 | 2.19 | 2.19 | 0.00 | 3.18 |
2009 | 2055 | 0.302288 | TGCAAGTGTTGACGTTACGC | 59.698 | 50.000 | 4.09 | 7.09 | 0.00 | 4.42 |
2077 | 2123 | 3.567397 | CTCCCGCTAGGCTGGTATATAT | 58.433 | 50.000 | 0.00 | 0.00 | 34.54 | 0.86 |
2124 | 2170 | 5.862845 | TGCTTTGGCATTATTGAAAAGGAA | 58.137 | 33.333 | 11.80 | 0.00 | 44.28 | 3.36 |
2162 | 2208 | 4.579869 | GGAGCTACAAAGAAACATCTGGA | 58.420 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
2259 | 2305 | 7.330454 | GTGTAAGTCAGGAGATGCATACATATG | 59.670 | 40.741 | 0.00 | 0.00 | 36.35 | 1.78 |
2288 | 2334 | 1.881973 | TGTCATGCAGTTTGCTTCCTC | 59.118 | 47.619 | 2.48 | 0.00 | 45.31 | 3.71 |
2302 | 2348 | 2.289002 | GCTTCCTCGCTGATAAACCATG | 59.711 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2303 | 2349 | 3.535561 | CTTCCTCGCTGATAAACCATGT | 58.464 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
2304 | 2350 | 4.693283 | CTTCCTCGCTGATAAACCATGTA | 58.307 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
2305 | 2351 | 4.054780 | TCCTCGCTGATAAACCATGTAC | 57.945 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2306 | 2352 | 3.704566 | TCCTCGCTGATAAACCATGTACT | 59.295 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
2307 | 2353 | 4.051922 | CCTCGCTGATAAACCATGTACTC | 58.948 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
2308 | 2354 | 4.051922 | CTCGCTGATAAACCATGTACTCC | 58.948 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
2309 | 2355 | 3.131396 | CGCTGATAAACCATGTACTCCC | 58.869 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2310 | 2356 | 3.181465 | CGCTGATAAACCATGTACTCCCT | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
2311 | 2357 | 4.381411 | GCTGATAAACCATGTACTCCCTC | 58.619 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2312 | 2358 | 4.743955 | GCTGATAAACCATGTACTCCCTCC | 60.744 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2313 | 2359 | 3.386726 | TGATAAACCATGTACTCCCTCCG | 59.613 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
2314 | 2360 | 0.909623 | AAACCATGTACTCCCTCCGG | 59.090 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
2315 | 2361 | 0.252558 | AACCATGTACTCCCTCCGGT | 60.253 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2316 | 2362 | 0.686769 | ACCATGTACTCCCTCCGGTC | 60.687 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2317 | 2363 | 1.400530 | CCATGTACTCCCTCCGGTCC | 61.401 | 65.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2318 | 2364 | 0.397254 | CATGTACTCCCTCCGGTCCT | 60.397 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2319 | 2365 | 0.338814 | ATGTACTCCCTCCGGTCCTT | 59.661 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2320 | 2366 | 0.115745 | TGTACTCCCTCCGGTCCTTT | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2321 | 2367 | 1.273759 | GTACTCCCTCCGGTCCTTTT | 58.726 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
2322 | 2368 | 1.627329 | GTACTCCCTCCGGTCCTTTTT | 59.373 | 52.381 | 0.00 | 0.00 | 0.00 | 1.94 |
2323 | 2369 | 2.034436 | ACTCCCTCCGGTCCTTTTTA | 57.966 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2324 | 2370 | 1.907255 | ACTCCCTCCGGTCCTTTTTAG | 59.093 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
2325 | 2371 | 1.907255 | CTCCCTCCGGTCCTTTTTAGT | 59.093 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
2326 | 2372 | 2.305052 | CTCCCTCCGGTCCTTTTTAGTT | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2327 | 2373 | 2.303890 | TCCCTCCGGTCCTTTTTAGTTC | 59.696 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2328 | 2374 | 2.344025 | CCTCCGGTCCTTTTTAGTTCG | 58.656 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
2329 | 2375 | 1.730612 | CTCCGGTCCTTTTTAGTTCGC | 59.269 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
2330 | 2376 | 1.070445 | TCCGGTCCTTTTTAGTTCGCA | 59.930 | 47.619 | 0.00 | 0.00 | 0.00 | 5.10 |
2331 | 2377 | 2.081462 | CCGGTCCTTTTTAGTTCGCAT | 58.919 | 47.619 | 0.00 | 0.00 | 0.00 | 4.73 |
2332 | 2378 | 3.055963 | TCCGGTCCTTTTTAGTTCGCATA | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 3.14 |
2333 | 2379 | 3.875134 | CCGGTCCTTTTTAGTTCGCATAT | 59.125 | 43.478 | 0.00 | 0.00 | 0.00 | 1.78 |
2334 | 2380 | 5.051816 | CCGGTCCTTTTTAGTTCGCATATA | 58.948 | 41.667 | 0.00 | 0.00 | 0.00 | 0.86 |
2335 | 2381 | 5.524646 | CCGGTCCTTTTTAGTTCGCATATAA | 59.475 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2336 | 2382 | 6.292703 | CCGGTCCTTTTTAGTTCGCATATAAG | 60.293 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
2337 | 2383 | 6.257193 | CGGTCCTTTTTAGTTCGCATATAAGT | 59.743 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
2338 | 2384 | 7.201582 | CGGTCCTTTTTAGTTCGCATATAAGTT | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
2339 | 2385 | 8.456471 | GGTCCTTTTTAGTTCGCATATAAGTTT | 58.544 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
2340 | 2386 | 9.836076 | GTCCTTTTTAGTTCGCATATAAGTTTT | 57.164 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
2341 | 2387 | 9.834628 | TCCTTTTTAGTTCGCATATAAGTTTTG | 57.165 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
2342 | 2388 | 9.620660 | CCTTTTTAGTTCGCATATAAGTTTTGT | 57.379 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
2344 | 2390 | 9.615295 | TTTTTAGTTCGCATATAAGTTTTGTCC | 57.385 | 29.630 | 0.00 | 0.00 | 0.00 | 4.02 |
2345 | 2391 | 5.813080 | AGTTCGCATATAAGTTTTGTCCC | 57.187 | 39.130 | 0.00 | 0.00 | 0.00 | 4.46 |
2346 | 2392 | 5.250200 | AGTTCGCATATAAGTTTTGTCCCA | 58.750 | 37.500 | 0.00 | 0.00 | 0.00 | 4.37 |
2347 | 2393 | 5.708230 | AGTTCGCATATAAGTTTTGTCCCAA | 59.292 | 36.000 | 0.00 | 0.00 | 0.00 | 4.12 |
2348 | 2394 | 5.811399 | TCGCATATAAGTTTTGTCCCAAG | 57.189 | 39.130 | 0.00 | 0.00 | 0.00 | 3.61 |
2349 | 2395 | 5.250200 | TCGCATATAAGTTTTGTCCCAAGT | 58.750 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2350 | 2396 | 5.353123 | TCGCATATAAGTTTTGTCCCAAGTC | 59.647 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2351 | 2397 | 5.123186 | CGCATATAAGTTTTGTCCCAAGTCA | 59.877 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2352 | 2398 | 6.348950 | CGCATATAAGTTTTGTCCCAAGTCAA | 60.349 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
2353 | 2399 | 7.375053 | GCATATAAGTTTTGTCCCAAGTCAAA | 58.625 | 34.615 | 0.00 | 0.00 | 30.64 | 2.69 |
2354 | 2400 | 7.328493 | GCATATAAGTTTTGTCCCAAGTCAAAC | 59.672 | 37.037 | 0.00 | 0.00 | 31.99 | 2.93 |
2355 | 2401 | 8.576442 | CATATAAGTTTTGTCCCAAGTCAAACT | 58.424 | 33.333 | 0.00 | 0.00 | 31.99 | 2.66 |
2356 | 2402 | 9.802039 | ATATAAGTTTTGTCCCAAGTCAAACTA | 57.198 | 29.630 | 0.00 | 0.00 | 31.99 | 2.24 |
2357 | 2403 | 8.706322 | ATAAGTTTTGTCCCAAGTCAAACTAT | 57.294 | 30.769 | 0.00 | 0.00 | 31.99 | 2.12 |
2358 | 2404 | 7.418337 | AAGTTTTGTCCCAAGTCAAACTATT | 57.582 | 32.000 | 0.00 | 0.00 | 31.99 | 1.73 |
2359 | 2405 | 7.418337 | AGTTTTGTCCCAAGTCAAACTATTT | 57.582 | 32.000 | 0.00 | 0.00 | 31.99 | 1.40 |
2360 | 2406 | 7.489160 | AGTTTTGTCCCAAGTCAAACTATTTC | 58.511 | 34.615 | 0.00 | 0.00 | 31.99 | 2.17 |
2361 | 2407 | 7.342026 | AGTTTTGTCCCAAGTCAAACTATTTCT | 59.658 | 33.333 | 0.00 | 0.00 | 31.99 | 2.52 |
2362 | 2408 | 8.626526 | GTTTTGTCCCAAGTCAAACTATTTCTA | 58.373 | 33.333 | 0.00 | 0.00 | 31.99 | 2.10 |
2363 | 2409 | 7.739498 | TTGTCCCAAGTCAAACTATTTCTAC | 57.261 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2364 | 2410 | 7.074653 | TGTCCCAAGTCAAACTATTTCTACT | 57.925 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2365 | 2411 | 7.514721 | TGTCCCAAGTCAAACTATTTCTACTT | 58.485 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
2366 | 2412 | 7.996644 | TGTCCCAAGTCAAACTATTTCTACTTT | 59.003 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
2367 | 2413 | 8.290325 | GTCCCAAGTCAAACTATTTCTACTTTG | 58.710 | 37.037 | 0.00 | 0.00 | 0.00 | 2.77 |
2368 | 2414 | 8.215050 | TCCCAAGTCAAACTATTTCTACTTTGA | 58.785 | 33.333 | 0.00 | 0.00 | 31.68 | 2.69 |
2369 | 2415 | 8.290325 | CCCAAGTCAAACTATTTCTACTTTGAC | 58.710 | 37.037 | 12.19 | 12.19 | 46.84 | 3.18 |
2388 | 2434 | 9.588096 | ACTTTGACCAAATTTATAGGAAAGAGT | 57.412 | 29.630 | 11.26 | 3.83 | 0.00 | 3.24 |
2391 | 2437 | 9.457436 | TTGACCAAATTTATAGGAAAGAGTACC | 57.543 | 33.333 | 0.28 | 0.00 | 0.00 | 3.34 |
2392 | 2438 | 8.607713 | TGACCAAATTTATAGGAAAGAGTACCA | 58.392 | 33.333 | 0.28 | 0.00 | 0.00 | 3.25 |
2393 | 2439 | 9.457436 | GACCAAATTTATAGGAAAGAGTACCAA | 57.543 | 33.333 | 0.28 | 0.00 | 0.00 | 3.67 |
2394 | 2440 | 9.239551 | ACCAAATTTATAGGAAAGAGTACCAAC | 57.760 | 33.333 | 0.28 | 0.00 | 0.00 | 3.77 |
2395 | 2441 | 9.238368 | CCAAATTTATAGGAAAGAGTACCAACA | 57.762 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
2405 | 2451 | 9.614792 | AGGAAAGAGTACCAACATTCATAATAC | 57.385 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2406 | 2452 | 8.837389 | GGAAAGAGTACCAACATTCATAATACC | 58.163 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
2407 | 2453 | 9.391006 | GAAAGAGTACCAACATTCATAATACCA | 57.609 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
2408 | 2454 | 9.747898 | AAAGAGTACCAACATTCATAATACCAA | 57.252 | 29.630 | 0.00 | 0.00 | 0.00 | 3.67 |
2409 | 2455 | 9.747898 | AAGAGTACCAACATTCATAATACCAAA | 57.252 | 29.630 | 0.00 | 0.00 | 0.00 | 3.28 |
2410 | 2456 | 9.920946 | AGAGTACCAACATTCATAATACCAAAT | 57.079 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
2412 | 2458 | 9.693739 | AGTACCAACATTCATAATACCAAATCA | 57.306 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2524 | 2570 | 5.132897 | ACTTTGCAAAGTTTGACTTGACA | 57.867 | 34.783 | 33.85 | 3.64 | 46.52 | 3.58 |
2525 | 2571 | 5.163513 | ACTTTGCAAAGTTTGACTTGACAG | 58.836 | 37.500 | 33.85 | 10.80 | 46.52 | 3.51 |
2526 | 2572 | 5.048083 | ACTTTGCAAAGTTTGACTTGACAGA | 60.048 | 36.000 | 33.85 | 0.00 | 46.52 | 3.41 |
2527 | 2573 | 5.384063 | TTGCAAAGTTTGACTTGACAGAA | 57.616 | 34.783 | 19.82 | 0.00 | 38.66 | 3.02 |
2528 | 2574 | 5.384063 | TGCAAAGTTTGACTTGACAGAAA | 57.616 | 34.783 | 19.82 | 0.00 | 38.66 | 2.52 |
2529 | 2575 | 5.964758 | TGCAAAGTTTGACTTGACAGAAAT | 58.035 | 33.333 | 19.82 | 0.00 | 38.66 | 2.17 |
2530 | 2576 | 6.035843 | TGCAAAGTTTGACTTGACAGAAATC | 58.964 | 36.000 | 19.82 | 0.00 | 38.66 | 2.17 |
2531 | 2577 | 6.127647 | TGCAAAGTTTGACTTGACAGAAATCT | 60.128 | 34.615 | 19.82 | 0.00 | 38.66 | 2.40 |
2532 | 2578 | 7.066887 | TGCAAAGTTTGACTTGACAGAAATCTA | 59.933 | 33.333 | 19.82 | 0.00 | 38.66 | 1.98 |
2533 | 2579 | 7.915397 | GCAAAGTTTGACTTGACAGAAATCTAA | 59.085 | 33.333 | 19.82 | 0.00 | 38.66 | 2.10 |
2534 | 2580 | 9.956720 | CAAAGTTTGACTTGACAGAAATCTAAT | 57.043 | 29.630 | 10.19 | 0.00 | 38.66 | 1.73 |
2538 | 2584 | 9.495754 | GTTTGACTTGACAGAAATCTAATATGC | 57.504 | 33.333 | 0.00 | 0.00 | 0.00 | 3.14 |
2539 | 2585 | 8.791327 | TTGACTTGACAGAAATCTAATATGCA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 3.96 |
2540 | 2586 | 8.429493 | TGACTTGACAGAAATCTAATATGCAG | 57.571 | 34.615 | 0.00 | 0.00 | 0.00 | 4.41 |
2541 | 2587 | 8.260114 | TGACTTGACAGAAATCTAATATGCAGA | 58.740 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
2542 | 2588 | 8.659925 | ACTTGACAGAAATCTAATATGCAGAG | 57.340 | 34.615 | 0.00 | 0.00 | 0.00 | 3.35 |
2543 | 2589 | 8.263640 | ACTTGACAGAAATCTAATATGCAGAGT | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
2544 | 2590 | 9.755804 | CTTGACAGAAATCTAATATGCAGAGTA | 57.244 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
2553 | 2599 | 8.910351 | ATCTAATATGCAGAGTAAAAAGGACC | 57.090 | 34.615 | 0.00 | 0.00 | 0.00 | 4.46 |
2554 | 2600 | 6.984474 | TCTAATATGCAGAGTAAAAAGGACCG | 59.016 | 38.462 | 0.00 | 0.00 | 0.00 | 4.79 |
2555 | 2601 | 2.178912 | TGCAGAGTAAAAAGGACCGG | 57.821 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2556 | 2602 | 1.695242 | TGCAGAGTAAAAAGGACCGGA | 59.305 | 47.619 | 9.46 | 0.00 | 0.00 | 5.14 |
2557 | 2603 | 2.289444 | TGCAGAGTAAAAAGGACCGGAG | 60.289 | 50.000 | 9.46 | 0.00 | 0.00 | 4.63 |
2741 | 2787 | 5.830991 | TGTTTTTGGGTGATACTTAGCTGTT | 59.169 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2743 | 2789 | 4.901197 | TTGGGTGATACTTAGCTGTTGA | 57.099 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
2890 | 2936 | 9.170890 | TCAGGTATAATCATCTATGGAAGGTTT | 57.829 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2940 | 2986 | 8.934697 | AGGAGGTAACATAATGCTCTATGTTTA | 58.065 | 33.333 | 21.36 | 10.45 | 45.83 | 2.01 |
2989 | 3057 | 6.042552 | ACTCCACAGAAAGAGAAAATGAGAGA | 59.957 | 38.462 | 0.00 | 0.00 | 34.13 | 3.10 |
3200 | 3275 | 8.587111 | GTCTGTTTTTGAAAGAAAAAGTAGCTG | 58.413 | 33.333 | 0.00 | 0.00 | 31.05 | 4.24 |
3201 | 3276 | 7.759433 | TCTGTTTTTGAAAGAAAAAGTAGCTGG | 59.241 | 33.333 | 0.00 | 0.00 | 31.05 | 4.85 |
3202 | 3277 | 7.382898 | TGTTTTTGAAAGAAAAAGTAGCTGGT | 58.617 | 30.769 | 0.00 | 0.00 | 31.05 | 4.00 |
3203 | 3278 | 7.330700 | TGTTTTTGAAAGAAAAAGTAGCTGGTG | 59.669 | 33.333 | 0.00 | 0.00 | 31.05 | 4.17 |
3204 | 3279 | 4.568152 | TGAAAGAAAAAGTAGCTGGTGC | 57.432 | 40.909 | 0.00 | 0.00 | 40.05 | 5.01 |
3251 | 3340 | 3.695830 | TGGGTTCTATGTTCTCCACAC | 57.304 | 47.619 | 0.00 | 0.00 | 38.61 | 3.82 |
3348 | 3437 | 2.136298 | TTTCACTGTGGAACTTGCCA | 57.864 | 45.000 | 8.11 | 0.00 | 38.04 | 4.92 |
3503 | 3598 | 7.763172 | ATCTGATTTTTCTACGTGCTTAGAG | 57.237 | 36.000 | 0.00 | 0.00 | 29.67 | 2.43 |
3519 | 3614 | 7.468768 | CGTGCTTAGAGATCTACAGATTTACCA | 60.469 | 40.741 | 0.00 | 0.00 | 34.37 | 3.25 |
3520 | 3615 | 8.364142 | GTGCTTAGAGATCTACAGATTTACCAT | 58.636 | 37.037 | 0.00 | 0.00 | 34.37 | 3.55 |
3522 | 3617 | 8.802267 | GCTTAGAGATCTACAGATTTACCATCT | 58.198 | 37.037 | 0.00 | 0.00 | 34.37 | 2.90 |
3531 | 3626 | 6.743575 | ACAGATTTACCATCTTACTTGCAC | 57.256 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
3534 | 3629 | 6.319658 | CAGATTTACCATCTTACTTGCACCAT | 59.680 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
3837 | 3936 | 6.446318 | TCAAGACATGGTGAAAAATTGCTAC | 58.554 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3838 | 3937 | 5.391312 | AGACATGGTGAAAAATTGCTACC | 57.609 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
3839 | 3938 | 4.832266 | AGACATGGTGAAAAATTGCTACCA | 59.168 | 37.500 | 0.00 | 0.00 | 44.66 | 3.25 |
3903 | 4012 | 4.393834 | TCAGCCTGCACATTGTTTTACTA | 58.606 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
3948 | 6294 | 9.669353 | TGTAAAGTTTACTTGTCTAGTACGAAG | 57.331 | 33.333 | 22.87 | 0.00 | 39.05 | 3.79 |
3978 | 6339 | 7.884877 | TCACTGCCCATGGATATTTATTTCTAG | 59.115 | 37.037 | 15.22 | 0.00 | 0.00 | 2.43 |
4061 | 6425 | 8.100164 | TCTTGTTATTACATCATTCACTCACCA | 58.900 | 33.333 | 0.00 | 0.00 | 33.44 | 4.17 |
4082 | 6446 | 3.757745 | ATTTCTTTACGACAATGCCCG | 57.242 | 42.857 | 0.00 | 0.00 | 0.00 | 6.13 |
4085 | 6449 | 2.768698 | TCTTTACGACAATGCCCGAAA | 58.231 | 42.857 | 2.85 | 0.07 | 0.00 | 3.46 |
4173 | 6988 | 6.760770 | CCAGTTTCCAGAATGCTTTTTGTTAA | 59.239 | 34.615 | 2.76 | 0.00 | 31.97 | 2.01 |
4259 | 7082 | 4.223255 | GGTCCTGTTCTTCTAGGCTTTACT | 59.777 | 45.833 | 0.00 | 0.00 | 34.00 | 2.24 |
4261 | 7084 | 4.838986 | TCCTGTTCTTCTAGGCTTTACTGT | 59.161 | 41.667 | 0.00 | 0.00 | 34.00 | 3.55 |
4262 | 7085 | 5.307196 | TCCTGTTCTTCTAGGCTTTACTGTT | 59.693 | 40.000 | 0.00 | 0.00 | 34.00 | 3.16 |
4286 | 7109 | 4.725556 | TTCAGTCATAAAACAGACGTGC | 57.274 | 40.909 | 0.00 | 0.00 | 39.67 | 5.34 |
4287 | 7110 | 3.064207 | TCAGTCATAAAACAGACGTGCC | 58.936 | 45.455 | 0.00 | 0.00 | 39.67 | 5.01 |
4298 | 7121 | 1.531149 | CAGACGTGCCCTTGTAACTTG | 59.469 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
4309 | 7132 | 5.222631 | CCCTTGTAACTTGCTGAAAATCAC | 58.777 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
4350 | 7175 | 8.814235 | GGATCATTTCAATGCTTTGTCTTATTG | 58.186 | 33.333 | 11.67 | 0.00 | 36.36 | 1.90 |
4351 | 7176 | 9.577110 | GATCATTTCAATGCTTTGTCTTATTGA | 57.423 | 29.630 | 11.67 | 0.45 | 37.66 | 2.57 |
4393 | 7218 | 6.636454 | TTTCCTGATAGATGTTTACCCTGT | 57.364 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
4456 | 7281 | 8.084590 | ACAGTTGTTGTACTATACTTTGAAGC | 57.915 | 34.615 | 0.00 | 0.00 | 38.56 | 3.86 |
4472 | 7297 | 3.668447 | TGAAGCTTGAACTGTGATCCTC | 58.332 | 45.455 | 2.10 | 0.00 | 0.00 | 3.71 |
4512 | 7337 | 3.826157 | CTCCAGGTTAATGCTGTTTTCCA | 59.174 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
4530 | 7355 | 3.620488 | TCCAACAAAGATGCTGATACCC | 58.380 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
4566 | 7391 | 7.863722 | TCCTTGTACCTTTAATTATACCTGCA | 58.136 | 34.615 | 0.00 | 0.00 | 0.00 | 4.41 |
4663 | 7488 | 2.413239 | CGATTGCTCATGAAAACGTGCT | 60.413 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
4698 | 7531 | 8.110860 | ACTGTAAATCTGTTATTCTTTGGTGG | 57.889 | 34.615 | 0.00 | 0.00 | 0.00 | 4.61 |
4699 | 7532 | 7.724061 | ACTGTAAATCTGTTATTCTTTGGTGGT | 59.276 | 33.333 | 0.00 | 0.00 | 0.00 | 4.16 |
4705 | 7538 | 3.964031 | TGTTATTCTTTGGTGGTGCCTTT | 59.036 | 39.130 | 0.00 | 0.00 | 38.35 | 3.11 |
4724 | 7557 | 6.030228 | GCCTTTGAATAGCAACTAACATCAC | 58.970 | 40.000 | 0.00 | 0.00 | 35.91 | 3.06 |
4725 | 7558 | 6.127897 | GCCTTTGAATAGCAACTAACATCACT | 60.128 | 38.462 | 0.00 | 0.00 | 35.91 | 3.41 |
4726 | 7559 | 7.575720 | GCCTTTGAATAGCAACTAACATCACTT | 60.576 | 37.037 | 0.00 | 0.00 | 35.91 | 3.16 |
4727 | 7560 | 7.752239 | CCTTTGAATAGCAACTAACATCACTTG | 59.248 | 37.037 | 0.00 | 0.00 | 35.91 | 3.16 |
4728 | 7561 | 7.744087 | TTGAATAGCAACTAACATCACTTGT | 57.256 | 32.000 | 0.00 | 0.00 | 41.53 | 3.16 |
4729 | 7562 | 7.364522 | TGAATAGCAACTAACATCACTTGTC | 57.635 | 36.000 | 0.00 | 0.00 | 37.68 | 3.18 |
4730 | 7563 | 6.090763 | TGAATAGCAACTAACATCACTTGTCG | 59.909 | 38.462 | 0.00 | 0.00 | 37.68 | 4.35 |
4731 | 7564 | 3.067106 | AGCAACTAACATCACTTGTCGG | 58.933 | 45.455 | 0.00 | 0.00 | 37.68 | 4.79 |
4732 | 7565 | 3.064207 | GCAACTAACATCACTTGTCGGA | 58.936 | 45.455 | 0.00 | 0.00 | 37.68 | 4.55 |
4733 | 7566 | 3.120649 | GCAACTAACATCACTTGTCGGAC | 60.121 | 47.826 | 0.00 | 0.00 | 37.68 | 4.79 |
4734 | 7567 | 4.307432 | CAACTAACATCACTTGTCGGACT | 58.693 | 43.478 | 9.88 | 0.00 | 37.68 | 3.85 |
4735 | 7568 | 5.466819 | CAACTAACATCACTTGTCGGACTA | 58.533 | 41.667 | 9.88 | 0.43 | 37.68 | 2.59 |
4736 | 7569 | 5.312120 | ACTAACATCACTTGTCGGACTAG | 57.688 | 43.478 | 16.31 | 16.31 | 37.68 | 2.57 |
4737 | 7570 | 5.008331 | ACTAACATCACTTGTCGGACTAGA | 58.992 | 41.667 | 23.09 | 9.92 | 37.68 | 2.43 |
4738 | 7571 | 5.652891 | ACTAACATCACTTGTCGGACTAGAT | 59.347 | 40.000 | 23.09 | 11.51 | 37.68 | 1.98 |
4739 | 7572 | 4.377839 | ACATCACTTGTCGGACTAGATG | 57.622 | 45.455 | 23.09 | 21.43 | 37.85 | 2.90 |
4740 | 7573 | 3.131223 | ACATCACTTGTCGGACTAGATGG | 59.869 | 47.826 | 23.09 | 13.09 | 36.59 | 3.51 |
4741 | 7574 | 2.803956 | TCACTTGTCGGACTAGATGGT | 58.196 | 47.619 | 23.09 | 2.03 | 0.00 | 3.55 |
4742 | 7575 | 3.162666 | TCACTTGTCGGACTAGATGGTT | 58.837 | 45.455 | 23.09 | 0.87 | 0.00 | 3.67 |
4743 | 7576 | 3.576982 | TCACTTGTCGGACTAGATGGTTT | 59.423 | 43.478 | 23.09 | 0.20 | 0.00 | 3.27 |
4744 | 7577 | 3.927142 | CACTTGTCGGACTAGATGGTTTC | 59.073 | 47.826 | 23.09 | 0.00 | 0.00 | 2.78 |
4745 | 7578 | 3.833070 | ACTTGTCGGACTAGATGGTTTCT | 59.167 | 43.478 | 23.09 | 0.00 | 38.57 | 2.52 |
4746 | 7579 | 4.082136 | ACTTGTCGGACTAGATGGTTTCTC | 60.082 | 45.833 | 23.09 | 0.00 | 35.79 | 2.87 |
4747 | 7580 | 2.758979 | TGTCGGACTAGATGGTTTCTCC | 59.241 | 50.000 | 9.88 | 0.00 | 35.79 | 3.71 |
4748 | 7581 | 2.101082 | GTCGGACTAGATGGTTTCTCCC | 59.899 | 54.545 | 0.00 | 0.00 | 35.79 | 4.30 |
4749 | 7582 | 2.024273 | TCGGACTAGATGGTTTCTCCCT | 60.024 | 50.000 | 0.00 | 0.00 | 35.79 | 4.20 |
4750 | 7583 | 2.101582 | CGGACTAGATGGTTTCTCCCTG | 59.898 | 54.545 | 0.00 | 0.00 | 35.79 | 4.45 |
4751 | 7584 | 2.158885 | GGACTAGATGGTTTCTCCCTGC | 60.159 | 54.545 | 0.00 | 0.00 | 35.79 | 4.85 |
4752 | 7585 | 1.482593 | ACTAGATGGTTTCTCCCTGCG | 59.517 | 52.381 | 0.00 | 0.00 | 35.79 | 5.18 |
4753 | 7586 | 0.178068 | TAGATGGTTTCTCCCTGCGC | 59.822 | 55.000 | 0.00 | 0.00 | 35.79 | 6.09 |
4754 | 7587 | 1.078143 | GATGGTTTCTCCCTGCGCT | 60.078 | 57.895 | 9.73 | 0.00 | 34.77 | 5.92 |
4755 | 7588 | 0.178068 | GATGGTTTCTCCCTGCGCTA | 59.822 | 55.000 | 9.73 | 0.00 | 34.77 | 4.26 |
4756 | 7589 | 0.839946 | ATGGTTTCTCCCTGCGCTAT | 59.160 | 50.000 | 9.73 | 0.00 | 34.77 | 2.97 |
4757 | 7590 | 1.491668 | TGGTTTCTCCCTGCGCTATA | 58.508 | 50.000 | 9.73 | 0.00 | 34.77 | 1.31 |
4758 | 7591 | 1.138266 | TGGTTTCTCCCTGCGCTATAC | 59.862 | 52.381 | 9.73 | 0.00 | 34.77 | 1.47 |
4759 | 7592 | 1.413077 | GGTTTCTCCCTGCGCTATACT | 59.587 | 52.381 | 9.73 | 0.00 | 0.00 | 2.12 |
4760 | 7593 | 2.546162 | GGTTTCTCCCTGCGCTATACTC | 60.546 | 54.545 | 9.73 | 0.00 | 0.00 | 2.59 |
4781 | 7614 | 2.496871 | CCTTAGCAATGGCCAACATCAA | 59.503 | 45.455 | 10.96 | 0.36 | 39.40 | 2.57 |
4783 | 7616 | 4.383335 | CCTTAGCAATGGCCAACATCAATT | 60.383 | 41.667 | 10.96 | 0.00 | 39.40 | 2.32 |
4784 | 7617 | 2.980568 | AGCAATGGCCAACATCAATTG | 58.019 | 42.857 | 10.96 | 9.31 | 39.40 | 2.32 |
4785 | 7618 | 2.303600 | AGCAATGGCCAACATCAATTGT | 59.696 | 40.909 | 10.96 | 0.00 | 39.40 | 2.71 |
4786 | 7619 | 2.674357 | GCAATGGCCAACATCAATTGTC | 59.326 | 45.455 | 10.96 | 0.68 | 39.40 | 3.18 |
4788 | 7621 | 4.571919 | CAATGGCCAACATCAATTGTCTT | 58.428 | 39.130 | 10.96 | 0.00 | 39.40 | 3.01 |
4790 | 7623 | 3.499338 | TGGCCAACATCAATTGTCTTCT | 58.501 | 40.909 | 0.61 | 0.00 | 37.68 | 2.85 |
4791 | 7624 | 3.256383 | TGGCCAACATCAATTGTCTTCTG | 59.744 | 43.478 | 0.61 | 0.09 | 37.68 | 3.02 |
4792 | 7625 | 3.248266 | GCCAACATCAATTGTCTTCTGC | 58.752 | 45.455 | 5.13 | 0.07 | 37.68 | 4.26 |
4793 | 7626 | 3.305539 | GCCAACATCAATTGTCTTCTGCA | 60.306 | 43.478 | 5.13 | 0.00 | 37.68 | 4.41 |
4794 | 7627 | 4.796946 | GCCAACATCAATTGTCTTCTGCAA | 60.797 | 41.667 | 5.13 | 0.00 | 37.68 | 4.08 |
4803 | 7636 | 8.114331 | TCAATTGTCTTCTGCAATAGATTGTT | 57.886 | 30.769 | 5.13 | 0.00 | 39.88 | 2.83 |
4807 | 7642 | 8.791327 | TTGTCTTCTGCAATAGATTGTTGATA | 57.209 | 30.769 | 4.27 | 0.00 | 39.88 | 2.15 |
4821 | 7656 | 8.945481 | AGATTGTTGATATCTCAGTTCTCAAG | 57.055 | 34.615 | 3.98 | 0.00 | 31.68 | 3.02 |
4822 | 7657 | 8.538701 | AGATTGTTGATATCTCAGTTCTCAAGT | 58.461 | 33.333 | 3.98 | 0.00 | 31.68 | 3.16 |
4823 | 7658 | 9.809096 | GATTGTTGATATCTCAGTTCTCAAGTA | 57.191 | 33.333 | 3.98 | 0.00 | 31.68 | 2.24 |
4857 | 7692 | 6.173191 | GCACCGTTGCTACTCTTAATTTAA | 57.827 | 37.500 | 0.00 | 0.00 | 46.17 | 1.52 |
4881 | 7721 | 2.294074 | TGTTGGAACACTGGTTGCTAC | 58.706 | 47.619 | 6.69 | 6.69 | 45.88 | 3.58 |
4883 | 7723 | 2.949644 | GTTGGAACACTGGTTGCTACTT | 59.050 | 45.455 | 0.00 | 0.00 | 43.71 | 2.24 |
4884 | 7724 | 2.571212 | TGGAACACTGGTTGCTACTTG | 58.429 | 47.619 | 0.00 | 0.00 | 44.73 | 3.16 |
4896 | 7736 | 8.512138 | ACTGGTTGCTACTTGTAATTTATGTTC | 58.488 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
5007 | 7854 | 3.676172 | GTGTCAAATGGTCAACATGCATG | 59.324 | 43.478 | 25.09 | 25.09 | 40.44 | 4.06 |
5045 | 7892 | 1.203287 | GCCTTTGCTGATTTCCTGGAC | 59.797 | 52.381 | 0.00 | 0.00 | 33.53 | 4.02 |
5068 | 7923 | 9.991388 | GGACGCAACTTTTATTATTGTATGTAA | 57.009 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
5070 | 7925 | 9.498307 | ACGCAACTTTTATTATTGTATGTAAGC | 57.502 | 29.630 | 0.00 | 0.00 | 0.00 | 3.09 |
5096 | 7951 | 5.464389 | ACGTTATAAATGGCACGTTATCTCC | 59.536 | 40.000 | 8.18 | 0.02 | 43.10 | 3.71 |
5118 | 7982 | 4.026804 | CCGTTGACATAAGTTATCGACAGC | 60.027 | 45.833 | 0.00 | 0.00 | 30.66 | 4.40 |
5128 | 7992 | 4.801891 | AGTTATCGACAGCGTCAAGTTTA | 58.198 | 39.130 | 8.91 | 0.00 | 38.98 | 2.01 |
5140 | 8004 | 3.064931 | GTCAAGTTTACGCTAGTGGCTT | 58.935 | 45.455 | 8.42 | 3.90 | 39.13 | 4.35 |
5143 | 8007 | 2.960819 | AGTTTACGCTAGTGGCTTCTG | 58.039 | 47.619 | 8.42 | 0.00 | 39.13 | 3.02 |
5221 | 8085 | 3.091545 | CAAAAAGCAGCTATTCCCCTGA | 58.908 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
5278 | 8143 | 3.225235 | GGCTGAGCCTGGTAGGAG | 58.775 | 66.667 | 17.96 | 0.00 | 46.69 | 3.69 |
5279 | 8144 | 1.687493 | GGCTGAGCCTGGTAGGAGT | 60.687 | 63.158 | 17.96 | 0.00 | 46.69 | 3.85 |
5280 | 8145 | 0.397254 | GGCTGAGCCTGGTAGGAGTA | 60.397 | 60.000 | 17.96 | 0.00 | 46.69 | 2.59 |
5281 | 8146 | 1.710816 | GCTGAGCCTGGTAGGAGTAT | 58.289 | 55.000 | 0.00 | 0.00 | 37.67 | 2.12 |
5282 | 8147 | 2.491086 | GGCTGAGCCTGGTAGGAGTATA | 60.491 | 54.545 | 17.96 | 0.00 | 46.69 | 1.47 |
5283 | 8148 | 3.436243 | GCTGAGCCTGGTAGGAGTATAT | 58.564 | 50.000 | 0.00 | 0.00 | 37.67 | 0.86 |
5288 | 8153 | 4.675038 | AGCCTGGTAGGAGTATATACCAC | 58.325 | 47.826 | 9.32 | 3.04 | 45.05 | 4.16 |
5289 | 8154 | 3.442977 | GCCTGGTAGGAGTATATACCACG | 59.557 | 52.174 | 9.32 | 0.00 | 45.05 | 4.94 |
5290 | 8155 | 4.660168 | CCTGGTAGGAGTATATACCACGT | 58.340 | 47.826 | 9.32 | 8.28 | 45.05 | 4.49 |
5291 | 8156 | 5.804446 | GCCTGGTAGGAGTATATACCACGTA | 60.804 | 48.000 | 9.32 | 7.42 | 45.05 | 3.57 |
5325 | 8190 | 7.476540 | AAAAAGTTACCCCAGGATATTTCAC | 57.523 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5326 | 8191 | 4.417426 | AGTTACCCCAGGATATTTCACG | 57.583 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
5350 | 8218 | 7.271868 | ACGTTTTTCAATATAAAAAGGCGCTAC | 59.728 | 33.333 | 7.64 | 0.00 | 43.15 | 3.58 |
5362 | 8230 | 0.318445 | GGCGCTACGATATTCCACGT | 60.318 | 55.000 | 7.64 | 0.00 | 44.72 | 4.49 |
5363 | 8231 | 1.069022 | GGCGCTACGATATTCCACGTA | 60.069 | 52.381 | 7.64 | 0.00 | 42.61 | 3.57 |
5364 | 8232 | 1.974680 | GCGCTACGATATTCCACGTAC | 59.025 | 52.381 | 0.00 | 0.00 | 42.61 | 3.67 |
5403 | 8271 | 2.163815 | CCATCAAGCAAAGCTCCTCTTG | 59.836 | 50.000 | 12.78 | 12.78 | 38.25 | 3.02 |
5404 | 8272 | 2.645838 | TCAAGCAAAGCTCCTCTTGT | 57.354 | 45.000 | 16.37 | 0.00 | 38.25 | 3.16 |
5405 | 8273 | 2.224606 | TCAAGCAAAGCTCCTCTTGTG | 58.775 | 47.619 | 16.37 | 2.38 | 38.25 | 3.33 |
5407 | 8275 | 1.602311 | AGCAAAGCTCCTCTTGTGTG | 58.398 | 50.000 | 0.00 | 0.00 | 30.62 | 3.82 |
5408 | 8276 | 0.595095 | GCAAAGCTCCTCTTGTGTGG | 59.405 | 55.000 | 0.00 | 0.00 | 34.67 | 4.17 |
5411 | 8279 | 3.476552 | CAAAGCTCCTCTTGTGTGGTTA | 58.523 | 45.455 | 0.00 | 0.00 | 34.67 | 2.85 |
5412 | 8280 | 4.074970 | CAAAGCTCCTCTTGTGTGGTTAT | 58.925 | 43.478 | 0.00 | 0.00 | 34.67 | 1.89 |
5417 | 8285 | 4.083271 | GCTCCTCTTGTGTGGTTATTGAAC | 60.083 | 45.833 | 0.00 | 0.00 | 34.56 | 3.18 |
5441 | 8316 | 0.847373 | TAACAGCTTCCAACACCCCA | 59.153 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
222 | 223 | 2.202810 | TCTGACAACGCACGCACA | 60.203 | 55.556 | 0.00 | 0.00 | 0.00 | 4.57 |
245 | 246 | 0.320771 | AGACCGGAACATCACAGCAC | 60.321 | 55.000 | 9.46 | 0.00 | 0.00 | 4.40 |
247 | 248 | 2.094182 | TCTAAGACCGGAACATCACAGC | 60.094 | 50.000 | 9.46 | 0.00 | 0.00 | 4.40 |
263 | 264 | 2.234908 | AGCTACACCACCAAGCTCTAAG | 59.765 | 50.000 | 0.00 | 0.00 | 42.89 | 2.18 |
265 | 266 | 1.938585 | AGCTACACCACCAAGCTCTA | 58.061 | 50.000 | 0.00 | 0.00 | 42.89 | 2.43 |
283 | 285 | 2.093973 | AGAGCGGACAGGAACATGTTAG | 60.094 | 50.000 | 11.95 | 7.31 | 32.25 | 2.34 |
313 | 315 | 0.773644 | AGGGGCTACATATGGCAAGG | 59.226 | 55.000 | 7.80 | 0.00 | 32.95 | 3.61 |
329 | 331 | 2.880268 | TGATAATTCATCGCAGCAAGGG | 59.120 | 45.455 | 0.00 | 0.00 | 36.33 | 3.95 |
369 | 371 | 7.514280 | CGAACACTGAAACGAGATTCATATGAG | 60.514 | 40.741 | 5.39 | 0.00 | 38.55 | 2.90 |
383 | 385 | 6.967199 | AGATTCAGAAAAACGAACACTGAAAC | 59.033 | 34.615 | 0.00 | 0.00 | 45.89 | 2.78 |
395 | 397 | 8.137437 | TCCAACAGAAATGAGATTCAGAAAAAC | 58.863 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
401 | 403 | 6.150641 | ACACATCCAACAGAAATGAGATTCAG | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
402 | 404 | 6.005823 | ACACATCCAACAGAAATGAGATTCA | 58.994 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
403 | 405 | 6.506500 | ACACATCCAACAGAAATGAGATTC | 57.493 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
404 | 406 | 7.120285 | CAGTACACATCCAACAGAAATGAGATT | 59.880 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
405 | 407 | 6.596888 | CAGTACACATCCAACAGAAATGAGAT | 59.403 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
406 | 408 | 5.934043 | CAGTACACATCCAACAGAAATGAGA | 59.066 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
408 | 410 | 5.620206 | ACAGTACACATCCAACAGAAATGA | 58.380 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
409 | 411 | 5.702670 | AGACAGTACACATCCAACAGAAATG | 59.297 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
410 | 412 | 5.869579 | AGACAGTACACATCCAACAGAAAT | 58.130 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
416 | 418 | 5.057149 | ACAGAAAGACAGTACACATCCAAC | 58.943 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
418 | 420 | 4.955811 | ACAGAAAGACAGTACACATCCA | 57.044 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
419 | 421 | 5.542779 | AGAACAGAAAGACAGTACACATCC | 58.457 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
496 | 498 | 3.492102 | AGATTATTATGCGGCAGTGGT | 57.508 | 42.857 | 9.25 | 0.00 | 0.00 | 4.16 |
498 | 500 | 5.391310 | GGATGAAGATTATTATGCGGCAGTG | 60.391 | 44.000 | 9.25 | 0.00 | 0.00 | 3.66 |
499 | 501 | 4.697352 | GGATGAAGATTATTATGCGGCAGT | 59.303 | 41.667 | 9.25 | 0.00 | 0.00 | 4.40 |
500 | 502 | 4.201753 | CGGATGAAGATTATTATGCGGCAG | 60.202 | 45.833 | 9.25 | 0.00 | 31.95 | 4.85 |
515 | 517 | 2.158755 | AGGGGCTAATCAACGGATGAAG | 60.159 | 50.000 | 0.00 | 0.00 | 42.54 | 3.02 |
523 | 525 | 1.065709 | TGACGGAAGGGGCTAATCAAC | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
532 | 534 | 1.392589 | CAATCCAATGACGGAAGGGG | 58.607 | 55.000 | 0.00 | 0.00 | 38.95 | 4.79 |
534 | 536 | 0.378257 | CGCAATCCAATGACGGAAGG | 59.622 | 55.000 | 0.00 | 0.00 | 38.95 | 3.46 |
535 | 537 | 1.062587 | GACGCAATCCAATGACGGAAG | 59.937 | 52.381 | 0.00 | 0.00 | 38.95 | 3.46 |
537 | 539 | 2.762360 | GACGCAATCCAATGACGGA | 58.238 | 52.632 | 0.00 | 0.00 | 40.07 | 4.69 |
553 | 555 | 4.722361 | AATAGAGTGGAAGACGAAGGAC | 57.278 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
554 | 556 | 5.740290 | AAAATAGAGTGGAAGACGAAGGA | 57.260 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
559 | 561 | 7.764443 | TCCAGAATTAAAATAGAGTGGAAGACG | 59.236 | 37.037 | 0.00 | 0.00 | 29.85 | 4.18 |
560 | 562 | 9.620259 | ATCCAGAATTAAAATAGAGTGGAAGAC | 57.380 | 33.333 | 0.00 | 0.00 | 36.46 | 3.01 |
592 | 597 | 5.163834 | GCGTAACACCATCCGAAAATTAAGA | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
597 | 602 | 2.418628 | CAGCGTAACACCATCCGAAAAT | 59.581 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
598 | 603 | 1.801771 | CAGCGTAACACCATCCGAAAA | 59.198 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
602 | 607 | 0.930310 | CATCAGCGTAACACCATCCG | 59.070 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
603 | 608 | 1.134521 | TCCATCAGCGTAACACCATCC | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
604 | 609 | 2.159099 | TCTCCATCAGCGTAACACCATC | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
605 | 610 | 1.831106 | TCTCCATCAGCGTAACACCAT | 59.169 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
606 | 611 | 1.262417 | TCTCCATCAGCGTAACACCA | 58.738 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
607 | 612 | 2.159099 | TCATCTCCATCAGCGTAACACC | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
609 | 614 | 3.447229 | TCTTCATCTCCATCAGCGTAACA | 59.553 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
610 | 615 | 4.046938 | TCTTCATCTCCATCAGCGTAAC | 57.953 | 45.455 | 0.00 | 0.00 | 0.00 | 2.50 |
611 | 616 | 4.081697 | TGTTCTTCATCTCCATCAGCGTAA | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
612 | 617 | 3.447229 | TGTTCTTCATCTCCATCAGCGTA | 59.553 | 43.478 | 0.00 | 0.00 | 0.00 | 4.42 |
613 | 618 | 2.234661 | TGTTCTTCATCTCCATCAGCGT | 59.765 | 45.455 | 0.00 | 0.00 | 0.00 | 5.07 |
614 | 619 | 2.864946 | CTGTTCTTCATCTCCATCAGCG | 59.135 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
615 | 620 | 3.118482 | TCCTGTTCTTCATCTCCATCAGC | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
616 | 621 | 4.750021 | TCCTGTTCTTCATCTCCATCAG | 57.250 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
636 | 642 | 0.304705 | AAAATCATGACGCGGCGATC | 59.695 | 50.000 | 30.94 | 21.41 | 0.00 | 3.69 |
645 | 651 | 2.993899 | ACGGTGAGACGAAAATCATGAC | 59.006 | 45.455 | 0.00 | 0.00 | 37.61 | 3.06 |
655 | 661 | 1.250328 | ACATAACCACGGTGAGACGA | 58.750 | 50.000 | 10.28 | 0.00 | 37.61 | 4.20 |
660 | 666 | 2.158798 | TGGAACAACATAACCACGGTGA | 60.159 | 45.455 | 10.28 | 0.00 | 31.92 | 4.02 |
661 | 667 | 2.222886 | TGGAACAACATAACCACGGTG | 58.777 | 47.619 | 0.00 | 0.00 | 31.92 | 4.94 |
662 | 668 | 2.642154 | TGGAACAACATAACCACGGT | 57.358 | 45.000 | 0.00 | 0.00 | 31.92 | 4.83 |
683 | 689 | 9.525826 | GGGAACAAATATGGAAGATATCTCAAT | 57.474 | 33.333 | 5.51 | 3.14 | 0.00 | 2.57 |
684 | 690 | 7.944554 | GGGGAACAAATATGGAAGATATCTCAA | 59.055 | 37.037 | 5.51 | 0.00 | 0.00 | 3.02 |
686 | 692 | 7.461749 | TGGGGAACAAATATGGAAGATATCTC | 58.538 | 38.462 | 5.51 | 0.00 | 0.00 | 2.75 |
687 | 693 | 7.295672 | TCTGGGGAACAAATATGGAAGATATCT | 59.704 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
688 | 694 | 7.461749 | TCTGGGGAACAAATATGGAAGATATC | 58.538 | 38.462 | 0.00 | 0.00 | 0.00 | 1.63 |
689 | 695 | 7.406620 | TCTGGGGAACAAATATGGAAGATAT | 57.593 | 36.000 | 0.00 | 0.00 | 0.00 | 1.63 |
691 | 697 | 5.732331 | TCTGGGGAACAAATATGGAAGAT | 57.268 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
693 | 699 | 6.796785 | AAATCTGGGGAACAAATATGGAAG | 57.203 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
694 | 700 | 6.500049 | ACAAAATCTGGGGAACAAATATGGAA | 59.500 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
737 | 744 | 2.276116 | AAAGAGGCAGACGCGGAGA | 61.276 | 57.895 | 12.47 | 0.00 | 39.92 | 3.71 |
746 | 753 | 3.130160 | GAGGCGGCAAAGAGGCAG | 61.130 | 66.667 | 13.08 | 0.00 | 44.47 | 4.85 |
761 | 768 | 2.260869 | CGCCAACCACCAACAGGAG | 61.261 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
765 | 772 | 1.826054 | CTTCCGCCAACCACCAACA | 60.826 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
791 | 798 | 3.064931 | AGCGTTGGTTTTCAGCTACTAC | 58.935 | 45.455 | 0.00 | 0.00 | 36.28 | 2.73 |
1230 | 1241 | 1.760086 | CAGATCTGAGGAGGGGCGT | 60.760 | 63.158 | 18.34 | 0.00 | 0.00 | 5.68 |
1260 | 1271 | 8.880991 | ATCACAAAGTAAACTAGACCTAGAGA | 57.119 | 34.615 | 10.74 | 0.00 | 36.97 | 3.10 |
1345 | 1356 | 2.030007 | TCAAACTACCGTAAGACCCGTG | 60.030 | 50.000 | 0.00 | 0.00 | 43.02 | 4.94 |
1351 | 1362 | 6.183360 | GCTCTAGGAATCAAACTACCGTAAGA | 60.183 | 42.308 | 0.00 | 0.00 | 43.02 | 2.10 |
1354 | 1365 | 4.951715 | TGCTCTAGGAATCAAACTACCGTA | 59.048 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
1355 | 1366 | 3.767673 | TGCTCTAGGAATCAAACTACCGT | 59.232 | 43.478 | 0.00 | 0.00 | 0.00 | 4.83 |
1357 | 1368 | 5.119694 | CCTTGCTCTAGGAATCAAACTACC | 58.880 | 45.833 | 0.00 | 0.00 | 37.50 | 3.18 |
1388 | 1399 | 5.819901 | GGCTACTTTGCAGAGATCATAACTT | 59.180 | 40.000 | 11.85 | 0.00 | 34.04 | 2.66 |
1389 | 1400 | 5.130145 | AGGCTACTTTGCAGAGATCATAACT | 59.870 | 40.000 | 11.85 | 0.00 | 34.04 | 2.24 |
1392 | 1403 | 4.406972 | ACAGGCTACTTTGCAGAGATCATA | 59.593 | 41.667 | 11.85 | 0.00 | 34.04 | 2.15 |
1428 | 1445 | 3.068165 | CCTACAGCACATCGGATGAACTA | 59.932 | 47.826 | 23.98 | 6.24 | 0.00 | 2.24 |
1516 | 1534 | 9.968743 | CGATATTGTCACATAATCATGAATCAG | 57.031 | 33.333 | 0.00 | 0.00 | 35.96 | 2.90 |
1541 | 1559 | 3.023946 | TCCACCAAATGCAAATTGTCG | 57.976 | 42.857 | 12.83 | 5.21 | 0.00 | 4.35 |
1550 | 1568 | 3.763897 | ACTAGGTCAAATCCACCAAATGC | 59.236 | 43.478 | 0.00 | 0.00 | 36.23 | 3.56 |
1571 | 1589 | 0.299597 | CGCCGTAAGCACCGAAATAC | 59.700 | 55.000 | 0.00 | 0.00 | 44.04 | 1.89 |
1573 | 1591 | 0.108709 | TACGCCGTAAGCACCGAAAT | 60.109 | 50.000 | 0.00 | 0.00 | 44.04 | 2.17 |
1577 | 1595 | 0.722848 | AAATTACGCCGTAAGCACCG | 59.277 | 50.000 | 15.55 | 0.00 | 44.04 | 4.94 |
1578 | 1596 | 3.786489 | GCTTAAATTACGCCGTAAGCACC | 60.786 | 47.826 | 15.55 | 0.00 | 45.01 | 5.01 |
1579 | 1597 | 3.348309 | GCTTAAATTACGCCGTAAGCAC | 58.652 | 45.455 | 15.55 | 0.00 | 45.01 | 4.40 |
1599 | 1617 | 1.149401 | GAATAGGAGCAGGTGGGGC | 59.851 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
1606 | 1624 | 4.590647 | TGGAGATACAAGGAATAGGAGCAG | 59.409 | 45.833 | 0.00 | 0.00 | 0.00 | 4.24 |
1625 | 1643 | 3.314635 | GGAGCACTAGCAATCAATTGGAG | 59.685 | 47.826 | 5.42 | 0.00 | 45.49 | 3.86 |
1630 | 1648 | 4.095483 | CGAAAAGGAGCACTAGCAATCAAT | 59.905 | 41.667 | 0.00 | 0.00 | 45.49 | 2.57 |
1650 | 1668 | 5.804692 | TTGCTCAAAGTCACTAAAACGAA | 57.195 | 34.783 | 0.00 | 0.00 | 0.00 | 3.85 |
1685 | 1703 | 7.954248 | GCATGATTCGATCTCACAATTACATAC | 59.046 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
1699 | 1717 | 5.675778 | CAAAGTGTTTGCATGATTCGATC | 57.324 | 39.130 | 0.00 | 0.00 | 33.36 | 3.69 |
1722 | 1741 | 3.058914 | CCTTGTACTCTGCAAAGAAACGG | 60.059 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
1737 | 1756 | 2.870411 | GTTGTGTGAGTGGACCTTGTAC | 59.130 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1746 | 1765 | 2.287788 | GCCATTTCTGTTGTGTGAGTGG | 60.288 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1794 | 1813 | 2.165641 | TGCACTTCGTACAGGATAGTGG | 59.834 | 50.000 | 0.00 | 0.00 | 37.33 | 4.00 |
1913 | 1936 | 9.823647 | GAATAAGAACATAGAACAGGAAGATCA | 57.176 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
1967 | 2013 | 9.486497 | TGCATGCTTTCTGTTAATAATTTTCAA | 57.514 | 25.926 | 20.33 | 0.00 | 0.00 | 2.69 |
1994 | 2040 | 1.591158 | CACTTGCGTAACGTCAACACT | 59.409 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
1995 | 2041 | 1.325338 | ACACTTGCGTAACGTCAACAC | 59.675 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
1998 | 2044 | 2.029486 | GTCAACACTTGCGTAACGTCAA | 59.971 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2000 | 2046 | 1.395080 | CGTCAACACTTGCGTAACGTC | 60.395 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
2001 | 2047 | 0.573521 | CGTCAACACTTGCGTAACGT | 59.426 | 50.000 | 0.00 | 0.00 | 0.00 | 3.99 |
2002 | 2048 | 0.573521 | ACGTCAACACTTGCGTAACG | 59.426 | 50.000 | 0.00 | 0.00 | 39.99 | 3.18 |
2005 | 2051 | 1.780292 | CGTAACGTCAACACTTGCGTA | 59.220 | 47.619 | 0.00 | 0.00 | 40.55 | 4.42 |
2006 | 2052 | 0.573521 | CGTAACGTCAACACTTGCGT | 59.426 | 50.000 | 0.00 | 0.00 | 42.20 | 5.24 |
2007 | 2053 | 0.716926 | GCGTAACGTCAACACTTGCG | 60.717 | 55.000 | 0.00 | 0.00 | 36.65 | 4.85 |
2008 | 2054 | 0.302288 | TGCGTAACGTCAACACTTGC | 59.698 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2009 | 2055 | 2.411031 | GGATGCGTAACGTCAACACTTG | 60.411 | 50.000 | 0.00 | 0.00 | 35.86 | 3.16 |
2015 | 2061 | 1.338294 | ACCATGGATGCGTAACGTCAA | 60.338 | 47.619 | 21.47 | 0.00 | 35.86 | 3.18 |
2077 | 2123 | 6.599244 | CACTTCTCTAATGTTGAGGGCAATTA | 59.401 | 38.462 | 0.00 | 0.00 | 36.22 | 1.40 |
2124 | 2170 | 0.757188 | CTCCGCCACTCACTAGGGAT | 60.757 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2150 | 2196 | 1.299976 | GGCCCGTCCAGATGTTTCT | 59.700 | 57.895 | 0.00 | 0.00 | 34.01 | 2.52 |
2229 | 2275 | 3.265791 | GCATCTCCTGACTTACACAAGG | 58.734 | 50.000 | 0.00 | 0.00 | 35.97 | 3.61 |
2259 | 2305 | 0.029300 | ACTGCATGACAACAACGTGC | 59.971 | 50.000 | 0.00 | 0.00 | 46.45 | 5.34 |
2288 | 2334 | 3.131396 | GGGAGTACATGGTTTATCAGCG | 58.869 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2309 | 2355 | 1.730612 | GCGAACTAAAAAGGACCGGAG | 59.269 | 52.381 | 9.46 | 0.00 | 0.00 | 4.63 |
2310 | 2356 | 1.070445 | TGCGAACTAAAAAGGACCGGA | 59.930 | 47.619 | 9.46 | 0.00 | 0.00 | 5.14 |
2311 | 2357 | 1.515081 | TGCGAACTAAAAAGGACCGG | 58.485 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2312 | 2358 | 6.257193 | ACTTATATGCGAACTAAAAAGGACCG | 59.743 | 38.462 | 0.00 | 0.00 | 0.00 | 4.79 |
2313 | 2359 | 7.549615 | ACTTATATGCGAACTAAAAAGGACC | 57.450 | 36.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2314 | 2360 | 9.836076 | AAAACTTATATGCGAACTAAAAAGGAC | 57.164 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
2315 | 2361 | 9.834628 | CAAAACTTATATGCGAACTAAAAAGGA | 57.165 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
2316 | 2362 | 9.620660 | ACAAAACTTATATGCGAACTAAAAAGG | 57.379 | 29.630 | 0.00 | 0.00 | 0.00 | 3.11 |
2318 | 2364 | 9.615295 | GGACAAAACTTATATGCGAACTAAAAA | 57.385 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
2319 | 2365 | 8.238631 | GGGACAAAACTTATATGCGAACTAAAA | 58.761 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
2320 | 2366 | 7.390996 | TGGGACAAAACTTATATGCGAACTAAA | 59.609 | 33.333 | 0.00 | 0.00 | 31.92 | 1.85 |
2321 | 2367 | 6.879993 | TGGGACAAAACTTATATGCGAACTAA | 59.120 | 34.615 | 0.00 | 0.00 | 31.92 | 2.24 |
2322 | 2368 | 6.408035 | TGGGACAAAACTTATATGCGAACTA | 58.592 | 36.000 | 0.00 | 0.00 | 31.92 | 2.24 |
2323 | 2369 | 5.250200 | TGGGACAAAACTTATATGCGAACT | 58.750 | 37.500 | 0.00 | 0.00 | 31.92 | 3.01 |
2324 | 2370 | 5.554822 | TGGGACAAAACTTATATGCGAAC | 57.445 | 39.130 | 0.00 | 0.00 | 31.92 | 3.95 |
2340 | 2386 | 7.074653 | AGTAGAAATAGTTTGACTTGGGACA | 57.925 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2341 | 2387 | 7.981102 | AAGTAGAAATAGTTTGACTTGGGAC | 57.019 | 36.000 | 3.47 | 0.00 | 29.19 | 4.46 |
2342 | 2388 | 8.215050 | TCAAAGTAGAAATAGTTTGACTTGGGA | 58.785 | 33.333 | 12.13 | 4.04 | 41.68 | 4.37 |
2343 | 2389 | 8.391075 | TCAAAGTAGAAATAGTTTGACTTGGG | 57.609 | 34.615 | 12.13 | 2.32 | 41.68 | 4.12 |
2362 | 2408 | 9.588096 | ACTCTTTCCTATAAATTTGGTCAAAGT | 57.412 | 29.630 | 0.00 | 0.00 | 33.32 | 2.66 |
2365 | 2411 | 9.457436 | GGTACTCTTTCCTATAAATTTGGTCAA | 57.543 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2366 | 2412 | 8.607713 | TGGTACTCTTTCCTATAAATTTGGTCA | 58.392 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
2367 | 2413 | 9.457436 | TTGGTACTCTTTCCTATAAATTTGGTC | 57.543 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
2368 | 2414 | 9.239551 | GTTGGTACTCTTTCCTATAAATTTGGT | 57.760 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
2369 | 2415 | 9.238368 | TGTTGGTACTCTTTCCTATAAATTTGG | 57.762 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
2379 | 2425 | 9.614792 | GTATTATGAATGTTGGTACTCTTTCCT | 57.385 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
2380 | 2426 | 8.837389 | GGTATTATGAATGTTGGTACTCTTTCC | 58.163 | 37.037 | 0.00 | 0.00 | 0.00 | 3.13 |
2381 | 2427 | 9.391006 | TGGTATTATGAATGTTGGTACTCTTTC | 57.609 | 33.333 | 0.00 | 0.01 | 0.00 | 2.62 |
2382 | 2428 | 9.747898 | TTGGTATTATGAATGTTGGTACTCTTT | 57.252 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
2383 | 2429 | 9.747898 | TTTGGTATTATGAATGTTGGTACTCTT | 57.252 | 29.630 | 0.00 | 0.00 | 0.00 | 2.85 |
2384 | 2430 | 9.920946 | ATTTGGTATTATGAATGTTGGTACTCT | 57.079 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
2386 | 2432 | 9.693739 | TGATTTGGTATTATGAATGTTGGTACT | 57.306 | 29.630 | 0.00 | 0.00 | 0.00 | 2.73 |
2503 | 2549 | 5.401550 | TCTGTCAAGTCAAACTTTGCAAAG | 58.598 | 37.500 | 32.53 | 32.53 | 36.03 | 2.77 |
2504 | 2550 | 5.384063 | TCTGTCAAGTCAAACTTTGCAAA | 57.616 | 34.783 | 12.14 | 12.14 | 36.03 | 3.68 |
2505 | 2551 | 5.384063 | TTCTGTCAAGTCAAACTTTGCAA | 57.616 | 34.783 | 0.00 | 0.00 | 36.03 | 4.08 |
2506 | 2552 | 5.384063 | TTTCTGTCAAGTCAAACTTTGCA | 57.616 | 34.783 | 0.00 | 0.00 | 36.03 | 4.08 |
2507 | 2553 | 6.268566 | AGATTTCTGTCAAGTCAAACTTTGC | 58.731 | 36.000 | 0.00 | 0.00 | 36.03 | 3.68 |
2508 | 2554 | 9.956720 | ATTAGATTTCTGTCAAGTCAAACTTTG | 57.043 | 29.630 | 0.00 | 0.00 | 36.03 | 2.77 |
2512 | 2558 | 9.495754 | GCATATTAGATTTCTGTCAAGTCAAAC | 57.504 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
2513 | 2559 | 9.230122 | TGCATATTAGATTTCTGTCAAGTCAAA | 57.770 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
2514 | 2560 | 8.791327 | TGCATATTAGATTTCTGTCAAGTCAA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
2515 | 2561 | 8.260114 | TCTGCATATTAGATTTCTGTCAAGTCA | 58.740 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2516 | 2562 | 8.654230 | TCTGCATATTAGATTTCTGTCAAGTC | 57.346 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
2517 | 2563 | 8.263640 | ACTCTGCATATTAGATTTCTGTCAAGT | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2518 | 2564 | 8.659925 | ACTCTGCATATTAGATTTCTGTCAAG | 57.340 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
2527 | 2573 | 9.343539 | GGTCCTTTTTACTCTGCATATTAGATT | 57.656 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2528 | 2574 | 7.657761 | CGGTCCTTTTTACTCTGCATATTAGAT | 59.342 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
2529 | 2575 | 6.984474 | CGGTCCTTTTTACTCTGCATATTAGA | 59.016 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
2530 | 2576 | 6.202954 | CCGGTCCTTTTTACTCTGCATATTAG | 59.797 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
2531 | 2577 | 6.053005 | CCGGTCCTTTTTACTCTGCATATTA | 58.947 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2532 | 2578 | 4.881850 | CCGGTCCTTTTTACTCTGCATATT | 59.118 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
2533 | 2579 | 4.163458 | TCCGGTCCTTTTTACTCTGCATAT | 59.837 | 41.667 | 0.00 | 0.00 | 0.00 | 1.78 |
2534 | 2580 | 3.516300 | TCCGGTCCTTTTTACTCTGCATA | 59.484 | 43.478 | 0.00 | 0.00 | 0.00 | 3.14 |
2535 | 2581 | 2.304761 | TCCGGTCCTTTTTACTCTGCAT | 59.695 | 45.455 | 0.00 | 0.00 | 0.00 | 3.96 |
2536 | 2582 | 1.695242 | TCCGGTCCTTTTTACTCTGCA | 59.305 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
2537 | 2583 | 2.347731 | CTCCGGTCCTTTTTACTCTGC | 58.652 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
2538 | 2584 | 2.354805 | CCCTCCGGTCCTTTTTACTCTG | 60.355 | 54.545 | 0.00 | 0.00 | 0.00 | 3.35 |
2539 | 2585 | 1.907255 | CCCTCCGGTCCTTTTTACTCT | 59.093 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
2540 | 2586 | 1.904537 | TCCCTCCGGTCCTTTTTACTC | 59.095 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
2541 | 2587 | 1.907255 | CTCCCTCCGGTCCTTTTTACT | 59.093 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
2542 | 2588 | 1.627329 | ACTCCCTCCGGTCCTTTTTAC | 59.373 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
2543 | 2589 | 2.034436 | ACTCCCTCCGGTCCTTTTTA | 57.966 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2544 | 2590 | 1.627329 | GTACTCCCTCCGGTCCTTTTT | 59.373 | 52.381 | 0.00 | 0.00 | 0.00 | 1.94 |
2545 | 2591 | 1.273759 | GTACTCCCTCCGGTCCTTTT | 58.726 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
2546 | 2592 | 0.115745 | TGTACTCCCTCCGGTCCTTT | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2547 | 2593 | 0.324460 | CTGTACTCCCTCCGGTCCTT | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2548 | 2594 | 1.306970 | CTGTACTCCCTCCGGTCCT | 59.693 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
2549 | 2595 | 1.000107 | ACTGTACTCCCTCCGGTCC | 60.000 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
2550 | 2596 | 0.034283 | AGACTGTACTCCCTCCGGTC | 60.034 | 60.000 | 0.00 | 0.00 | 35.23 | 4.79 |
2551 | 2597 | 0.408700 | AAGACTGTACTCCCTCCGGT | 59.591 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2552 | 2598 | 1.204941 | CAAAGACTGTACTCCCTCCGG | 59.795 | 57.143 | 0.00 | 0.00 | 0.00 | 5.14 |
2553 | 2599 | 1.404315 | GCAAAGACTGTACTCCCTCCG | 60.404 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
2554 | 2600 | 1.903183 | AGCAAAGACTGTACTCCCTCC | 59.097 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2555 | 2601 | 4.803098 | TTAGCAAAGACTGTACTCCCTC | 57.197 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
2556 | 2602 | 4.347000 | TGTTTAGCAAAGACTGTACTCCCT | 59.653 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
2557 | 2603 | 4.638304 | TGTTTAGCAAAGACTGTACTCCC | 58.362 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
2558 | 2604 | 6.613755 | TTTGTTTAGCAAAGACTGTACTCC | 57.386 | 37.500 | 0.00 | 0.00 | 41.68 | 3.85 |
2598 | 2644 | 3.001634 | CACGCATGAATGTATGTCAGGAC | 59.998 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
2599 | 2645 | 3.197265 | CACGCATGAATGTATGTCAGGA | 58.803 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2771 | 2817 | 3.430453 | CCCAAAAGCCTTCTGGTATTCA | 58.570 | 45.455 | 0.00 | 0.00 | 35.27 | 2.57 |
2890 | 2936 | 4.037803 | AGCAATGAACACACAAGCATACAA | 59.962 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
2989 | 3057 | 0.178903 | TGTAGTTGCACCCTCCCTCT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3251 | 3340 | 7.341769 | TCCAAACATAGAACCCATTCCTAAATG | 59.658 | 37.037 | 0.00 | 0.00 | 41.69 | 2.32 |
3348 | 3437 | 6.068010 | TGAGAACAAGTTTGTCATGGGTTAT | 58.932 | 36.000 | 0.00 | 0.00 | 41.31 | 1.89 |
3492 | 3587 | 6.458232 | AAATCTGTAGATCTCTAAGCACGT | 57.542 | 37.500 | 0.00 | 0.00 | 32.75 | 4.49 |
3494 | 3589 | 7.717568 | TGGTAAATCTGTAGATCTCTAAGCAC | 58.282 | 38.462 | 0.00 | 0.00 | 32.75 | 4.40 |
3500 | 3595 | 9.875708 | AGTAAGATGGTAAATCTGTAGATCTCT | 57.124 | 33.333 | 0.00 | 0.00 | 32.75 | 3.10 |
3503 | 3598 | 8.983724 | GCAAGTAAGATGGTAAATCTGTAGATC | 58.016 | 37.037 | 0.00 | 0.00 | 32.75 | 2.75 |
3519 | 3614 | 6.441093 | CATTGTGTATGGTGCAAGTAAGAT | 57.559 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
3520 | 3615 | 5.878332 | CATTGTGTATGGTGCAAGTAAGA | 57.122 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
3561 | 3656 | 5.102953 | TGGTGAAGATCATCTTTACAGGG | 57.897 | 43.478 | 20.66 | 0.00 | 42.62 | 4.45 |
3809 | 3907 | 6.922957 | GCAATTTTTCACCATGTCTTGAGTAA | 59.077 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
3814 | 3912 | 5.634859 | GGTAGCAATTTTTCACCATGTCTTG | 59.365 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3837 | 3936 | 7.770897 | AGCTTGGAGATAAATAACAGTAACTGG | 59.229 | 37.037 | 0.00 | 0.00 | 35.51 | 4.00 |
3838 | 3937 | 8.723942 | AGCTTGGAGATAAATAACAGTAACTG | 57.276 | 34.615 | 0.00 | 0.00 | 37.52 | 3.16 |
3839 | 3938 | 9.819267 | GTAGCTTGGAGATAAATAACAGTAACT | 57.181 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3868 | 3967 | 2.657297 | GGCTGAAAGACAATGCCCA | 58.343 | 52.632 | 0.00 | 0.00 | 46.27 | 5.36 |
3903 | 4012 | 0.839946 | AATCTAATGGAGGCGCCTGT | 59.160 | 50.000 | 38.41 | 17.36 | 37.63 | 4.00 |
3943 | 6289 | 1.274703 | ATGGGCAGTGATCCCTTCGT | 61.275 | 55.000 | 7.29 | 0.00 | 44.23 | 3.85 |
3944 | 6290 | 0.816825 | CATGGGCAGTGATCCCTTCG | 60.817 | 60.000 | 7.29 | 0.00 | 44.23 | 3.79 |
3948 | 6294 | 1.067295 | TATCCATGGGCAGTGATCCC | 58.933 | 55.000 | 13.02 | 0.00 | 44.17 | 3.85 |
3978 | 6339 | 9.761504 | ATATTAGCATCACATATAGCAGATGAC | 57.238 | 33.333 | 12.61 | 6.43 | 40.10 | 3.06 |
4061 | 6425 | 3.754323 | TCGGGCATTGTCGTAAAGAAATT | 59.246 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
4082 | 6446 | 2.746362 | AGTGCAGCATTAGAGCAGTTTC | 59.254 | 45.455 | 0.00 | 0.00 | 38.70 | 2.78 |
4085 | 6449 | 2.082231 | CAAGTGCAGCATTAGAGCAGT | 58.918 | 47.619 | 0.00 | 0.00 | 43.28 | 4.40 |
4192 | 7011 | 1.256812 | GCCTTAAGAGCCCTTTGCAA | 58.743 | 50.000 | 3.36 | 0.00 | 44.83 | 4.08 |
4193 | 7012 | 0.112218 | TGCCTTAAGAGCCCTTTGCA | 59.888 | 50.000 | 3.36 | 0.00 | 44.83 | 4.08 |
4194 | 7013 | 0.528017 | GTGCCTTAAGAGCCCTTTGC | 59.472 | 55.000 | 3.36 | 0.00 | 41.71 | 3.68 |
4195 | 7014 | 2.206576 | AGTGCCTTAAGAGCCCTTTG | 57.793 | 50.000 | 3.36 | 0.00 | 33.94 | 2.77 |
4262 | 7085 | 5.968848 | GCACGTCTGTTTTATGACTGAAAAA | 59.031 | 36.000 | 0.00 | 0.00 | 30.75 | 1.94 |
4282 | 7105 | 0.238289 | CAGCAAGTTACAAGGGCACG | 59.762 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
4283 | 7106 | 1.604604 | TCAGCAAGTTACAAGGGCAC | 58.395 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4284 | 7107 | 2.356665 | TTCAGCAAGTTACAAGGGCA | 57.643 | 45.000 | 0.00 | 0.00 | 0.00 | 5.36 |
4285 | 7108 | 3.726291 | TTTTCAGCAAGTTACAAGGGC | 57.274 | 42.857 | 0.00 | 0.00 | 0.00 | 5.19 |
4286 | 7109 | 5.222631 | GTGATTTTCAGCAAGTTACAAGGG | 58.777 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
4287 | 7110 | 4.911610 | CGTGATTTTCAGCAAGTTACAAGG | 59.088 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
4298 | 7121 | 7.006210 | CGTAACACTAAAATCGTGATTTTCAGC | 59.994 | 37.037 | 20.46 | 7.70 | 44.98 | 4.26 |
4309 | 7132 | 7.680982 | TGAAATGATCCGTAACACTAAAATCG | 58.319 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
4323 | 7146 | 4.990257 | AGACAAAGCATTGAAATGATCCG | 58.010 | 39.130 | 8.96 | 0.00 | 38.94 | 4.18 |
4350 | 7175 | 9.612620 | CAGGAAAACAAACATAGTGATAACTTC | 57.387 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
4351 | 7176 | 9.349713 | TCAGGAAAACAAACATAGTGATAACTT | 57.650 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
4364 | 7189 | 8.027189 | GGGTAAACATCTATCAGGAAAACAAAC | 58.973 | 37.037 | 0.00 | 0.00 | 0.00 | 2.93 |
4368 | 7193 | 6.884836 | ACAGGGTAAACATCTATCAGGAAAAC | 59.115 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
4393 | 7218 | 5.620206 | TGCTTGTAGAACATCTGAAAAGGA | 58.380 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
4456 | 7281 | 4.841422 | AGATTGGAGGATCACAGTTCAAG | 58.159 | 43.478 | 0.00 | 0.00 | 36.25 | 3.02 |
4512 | 7337 | 4.574674 | TGAGGGTATCAGCATCTTTGTT | 57.425 | 40.909 | 0.00 | 0.00 | 32.77 | 2.83 |
4530 | 7355 | 4.679373 | AGGTACAAGGAGCATGTATGAG | 57.321 | 45.455 | 0.00 | 0.00 | 35.84 | 2.90 |
4566 | 7391 | 8.606830 | AGGAGTAAAAAGTGTCCTGAGAATTAT | 58.393 | 33.333 | 0.00 | 0.00 | 38.05 | 1.28 |
4615 | 7440 | 4.914312 | ACGGTACAACACAACGATATTG | 57.086 | 40.909 | 0.00 | 0.00 | 0.00 | 1.90 |
4698 | 7531 | 5.371115 | TGTTAGTTGCTATTCAAAGGCAC | 57.629 | 39.130 | 0.00 | 0.00 | 36.26 | 5.01 |
4699 | 7532 | 5.709631 | TGATGTTAGTTGCTATTCAAAGGCA | 59.290 | 36.000 | 0.00 | 0.00 | 36.26 | 4.75 |
4705 | 7538 | 6.090763 | CGACAAGTGATGTTAGTTGCTATTCA | 59.909 | 38.462 | 0.00 | 0.00 | 44.12 | 2.57 |
4724 | 7557 | 4.425520 | GAGAAACCATCTAGTCCGACAAG | 58.574 | 47.826 | 0.40 | 0.00 | 38.96 | 3.16 |
4725 | 7558 | 3.194968 | GGAGAAACCATCTAGTCCGACAA | 59.805 | 47.826 | 0.40 | 0.00 | 38.96 | 3.18 |
4726 | 7559 | 2.758979 | GGAGAAACCATCTAGTCCGACA | 59.241 | 50.000 | 0.40 | 0.00 | 38.96 | 4.35 |
4727 | 7560 | 2.101082 | GGGAGAAACCATCTAGTCCGAC | 59.899 | 54.545 | 0.00 | 0.00 | 38.96 | 4.79 |
4728 | 7561 | 2.024273 | AGGGAGAAACCATCTAGTCCGA | 60.024 | 50.000 | 0.00 | 0.00 | 38.96 | 4.55 |
4729 | 7562 | 2.101582 | CAGGGAGAAACCATCTAGTCCG | 59.898 | 54.545 | 0.00 | 0.00 | 38.96 | 4.79 |
4730 | 7563 | 2.158885 | GCAGGGAGAAACCATCTAGTCC | 60.159 | 54.545 | 0.00 | 0.00 | 38.96 | 3.85 |
4731 | 7564 | 2.482142 | CGCAGGGAGAAACCATCTAGTC | 60.482 | 54.545 | 0.00 | 0.00 | 38.96 | 2.59 |
4732 | 7565 | 1.482593 | CGCAGGGAGAAACCATCTAGT | 59.517 | 52.381 | 0.00 | 0.00 | 38.96 | 2.57 |
4733 | 7566 | 1.808133 | GCGCAGGGAGAAACCATCTAG | 60.808 | 57.143 | 0.30 | 0.00 | 38.96 | 2.43 |
4734 | 7567 | 0.178068 | GCGCAGGGAGAAACCATCTA | 59.822 | 55.000 | 0.30 | 0.00 | 38.96 | 1.98 |
4735 | 7568 | 1.078143 | GCGCAGGGAGAAACCATCT | 60.078 | 57.895 | 0.30 | 0.00 | 42.61 | 2.90 |
4736 | 7569 | 0.178068 | TAGCGCAGGGAGAAACCATC | 59.822 | 55.000 | 11.47 | 0.00 | 41.20 | 3.51 |
4737 | 7570 | 0.839946 | ATAGCGCAGGGAGAAACCAT | 59.160 | 50.000 | 11.47 | 0.00 | 41.20 | 3.55 |
4738 | 7571 | 1.138266 | GTATAGCGCAGGGAGAAACCA | 59.862 | 52.381 | 11.47 | 0.00 | 41.20 | 3.67 |
4739 | 7572 | 1.413077 | AGTATAGCGCAGGGAGAAACC | 59.587 | 52.381 | 11.47 | 0.00 | 38.08 | 3.27 |
4740 | 7573 | 2.546162 | GGAGTATAGCGCAGGGAGAAAC | 60.546 | 54.545 | 11.47 | 0.00 | 0.00 | 2.78 |
4741 | 7574 | 1.687123 | GGAGTATAGCGCAGGGAGAAA | 59.313 | 52.381 | 11.47 | 0.00 | 0.00 | 2.52 |
4742 | 7575 | 1.133450 | AGGAGTATAGCGCAGGGAGAA | 60.133 | 52.381 | 11.47 | 0.00 | 0.00 | 2.87 |
4743 | 7576 | 0.478942 | AGGAGTATAGCGCAGGGAGA | 59.521 | 55.000 | 11.47 | 0.00 | 0.00 | 3.71 |
4744 | 7577 | 1.333177 | AAGGAGTATAGCGCAGGGAG | 58.667 | 55.000 | 11.47 | 0.00 | 0.00 | 4.30 |
4745 | 7578 | 2.515854 | CTAAGGAGTATAGCGCAGGGA | 58.484 | 52.381 | 11.47 | 0.00 | 0.00 | 4.20 |
4746 | 7579 | 1.067495 | GCTAAGGAGTATAGCGCAGGG | 60.067 | 57.143 | 11.47 | 0.00 | 36.72 | 4.45 |
4747 | 7580 | 1.613925 | TGCTAAGGAGTATAGCGCAGG | 59.386 | 52.381 | 11.47 | 0.00 | 46.93 | 4.85 |
4748 | 7581 | 3.371102 | TTGCTAAGGAGTATAGCGCAG | 57.629 | 47.619 | 11.47 | 0.00 | 46.93 | 5.18 |
4749 | 7582 | 3.554960 | CCATTGCTAAGGAGTATAGCGCA | 60.555 | 47.826 | 11.47 | 0.00 | 46.93 | 6.09 |
4750 | 7583 | 2.996621 | CCATTGCTAAGGAGTATAGCGC | 59.003 | 50.000 | 0.00 | 0.00 | 46.93 | 5.92 |
4751 | 7584 | 2.996621 | GCCATTGCTAAGGAGTATAGCG | 59.003 | 50.000 | 0.00 | 0.00 | 46.93 | 4.26 |
4752 | 7585 | 3.244561 | TGGCCATTGCTAAGGAGTATAGC | 60.245 | 47.826 | 0.00 | 0.00 | 44.77 | 2.97 |
4753 | 7586 | 4.623932 | TGGCCATTGCTAAGGAGTATAG | 57.376 | 45.455 | 0.00 | 0.00 | 37.74 | 1.31 |
4754 | 7587 | 4.165180 | TGTTGGCCATTGCTAAGGAGTATA | 59.835 | 41.667 | 6.09 | 0.00 | 38.76 | 1.47 |
4755 | 7588 | 3.053693 | TGTTGGCCATTGCTAAGGAGTAT | 60.054 | 43.478 | 6.09 | 0.00 | 38.76 | 2.12 |
4756 | 7589 | 2.307392 | TGTTGGCCATTGCTAAGGAGTA | 59.693 | 45.455 | 6.09 | 0.00 | 38.76 | 2.59 |
4757 | 7590 | 1.075374 | TGTTGGCCATTGCTAAGGAGT | 59.925 | 47.619 | 6.09 | 0.00 | 38.76 | 3.85 |
4758 | 7591 | 1.838112 | TGTTGGCCATTGCTAAGGAG | 58.162 | 50.000 | 6.09 | 0.00 | 38.76 | 3.69 |
4759 | 7592 | 2.291475 | TGATGTTGGCCATTGCTAAGGA | 60.291 | 45.455 | 6.09 | 0.00 | 38.76 | 3.36 |
4760 | 7593 | 2.101783 | TGATGTTGGCCATTGCTAAGG | 58.898 | 47.619 | 6.09 | 0.00 | 38.76 | 2.69 |
4781 | 7614 | 7.692460 | TCAACAATCTATTGCAGAAGACAAT | 57.308 | 32.000 | 2.60 | 0.00 | 41.38 | 2.71 |
4783 | 7616 | 8.969260 | ATATCAACAATCTATTGCAGAAGACA | 57.031 | 30.769 | 2.60 | 0.00 | 41.38 | 3.41 |
4784 | 7617 | 9.270640 | AGATATCAACAATCTATTGCAGAAGAC | 57.729 | 33.333 | 5.32 | 0.00 | 41.38 | 3.01 |
4785 | 7618 | 9.486497 | GAGATATCAACAATCTATTGCAGAAGA | 57.514 | 33.333 | 5.32 | 2.90 | 41.38 | 2.87 |
4786 | 7619 | 9.269453 | TGAGATATCAACAATCTATTGCAGAAG | 57.731 | 33.333 | 5.32 | 0.00 | 41.38 | 2.85 |
4788 | 7621 | 8.427276 | ACTGAGATATCAACAATCTATTGCAGA | 58.573 | 33.333 | 5.32 | 2.06 | 41.38 | 4.26 |
4790 | 7623 | 8.969260 | AACTGAGATATCAACAATCTATTGCA | 57.031 | 30.769 | 5.32 | 0.00 | 41.38 | 4.08 |
4791 | 7624 | 9.270640 | AGAACTGAGATATCAACAATCTATTGC | 57.729 | 33.333 | 5.32 | 0.00 | 41.38 | 3.56 |
4803 | 7636 | 9.634021 | ACATACTACTTGAGAACTGAGATATCA | 57.366 | 33.333 | 5.32 | 0.00 | 0.00 | 2.15 |
4807 | 7642 | 7.397476 | TCCAACATACTACTTGAGAACTGAGAT | 59.603 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
4821 | 7656 | 2.667473 | ACGGTGCTCCAACATACTAC | 57.333 | 50.000 | 5.52 | 0.00 | 0.00 | 2.73 |
4822 | 7657 | 2.967362 | CAACGGTGCTCCAACATACTA | 58.033 | 47.619 | 5.52 | 0.00 | 0.00 | 1.82 |
4823 | 7658 | 1.808411 | CAACGGTGCTCCAACATACT | 58.192 | 50.000 | 5.52 | 0.00 | 0.00 | 2.12 |
4857 | 7692 | 2.884639 | GCAACCAGTGTTCCAACATACT | 59.115 | 45.455 | 0.00 | 0.00 | 41.59 | 2.12 |
4896 | 7736 | 7.688372 | AGCATAGTACAAACAATCTTCAATCG | 58.312 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
4905 | 7752 | 7.944729 | ATCAAGGAAGCATAGTACAAACAAT | 57.055 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
4982 | 7829 | 2.045561 | TGTTGACCATTTGACACGGT | 57.954 | 45.000 | 0.00 | 0.00 | 35.12 | 4.83 |
5007 | 7854 | 0.439600 | GCATTTGCATTTGACACGGC | 59.560 | 50.000 | 0.00 | 0.00 | 41.59 | 5.68 |
5045 | 7892 | 9.497030 | TGCTTACATACAATAATAAAAGTTGCG | 57.503 | 29.630 | 0.00 | 0.00 | 0.00 | 4.85 |
5068 | 7923 | 2.745281 | ACGTGCCATTTATAACGTTGCT | 59.255 | 40.909 | 11.99 | 0.32 | 46.27 | 3.91 |
5069 | 7924 | 3.125698 | ACGTGCCATTTATAACGTTGC | 57.874 | 42.857 | 11.99 | 4.18 | 46.27 | 4.17 |
5073 | 7928 | 5.388061 | CGGAGATAACGTGCCATTTATAACG | 60.388 | 44.000 | 0.00 | 0.00 | 41.64 | 3.18 |
5074 | 7929 | 5.464389 | ACGGAGATAACGTGCCATTTATAAC | 59.536 | 40.000 | 0.00 | 0.00 | 43.78 | 1.89 |
5075 | 7930 | 5.603596 | ACGGAGATAACGTGCCATTTATAA | 58.396 | 37.500 | 0.00 | 0.00 | 43.78 | 0.98 |
5076 | 7931 | 5.204409 | ACGGAGATAACGTGCCATTTATA | 57.796 | 39.130 | 0.00 | 0.00 | 43.78 | 0.98 |
5077 | 7932 | 4.067972 | ACGGAGATAACGTGCCATTTAT | 57.932 | 40.909 | 0.00 | 0.00 | 43.78 | 1.40 |
5078 | 7933 | 3.530265 | ACGGAGATAACGTGCCATTTA | 57.470 | 42.857 | 0.00 | 0.00 | 43.78 | 1.40 |
5079 | 7934 | 2.396590 | ACGGAGATAACGTGCCATTT | 57.603 | 45.000 | 0.00 | 0.00 | 43.78 | 2.32 |
5080 | 7935 | 2.006888 | CAACGGAGATAACGTGCCATT | 58.993 | 47.619 | 0.00 | 0.00 | 44.83 | 3.16 |
5081 | 7936 | 1.206132 | TCAACGGAGATAACGTGCCAT | 59.794 | 47.619 | 0.00 | 0.00 | 44.83 | 4.40 |
5082 | 7937 | 0.604073 | TCAACGGAGATAACGTGCCA | 59.396 | 50.000 | 0.00 | 0.00 | 44.83 | 4.92 |
5096 | 7951 | 4.316446 | CGCTGTCGATAACTTATGTCAACG | 60.316 | 45.833 | 0.00 | 0.00 | 38.10 | 4.10 |
5118 | 7982 | 1.389106 | GCCACTAGCGTAAACTTGACG | 59.611 | 52.381 | 0.00 | 0.00 | 43.19 | 4.35 |
5140 | 8004 | 1.070758 | GGTCCAGTCAAGACTTGCAGA | 59.929 | 52.381 | 10.50 | 4.75 | 40.20 | 4.26 |
5143 | 8007 | 1.230324 | GTGGTCCAGTCAAGACTTGC | 58.770 | 55.000 | 10.50 | 5.98 | 40.20 | 4.01 |
5221 | 8085 | 2.982130 | CCTCAACGCTAGCCTGGT | 59.018 | 61.111 | 9.66 | 0.00 | 0.00 | 4.00 |
5266 | 8131 | 4.675038 | GTGGTATATACTCCTACCAGGCT | 58.325 | 47.826 | 12.54 | 0.00 | 46.05 | 4.58 |
5307 | 8172 | 4.847990 | AACGTGAAATATCCTGGGGTAA | 57.152 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
5311 | 8176 | 5.637006 | TGAAAAACGTGAAATATCCTGGG | 57.363 | 39.130 | 0.00 | 0.00 | 0.00 | 4.45 |
5322 | 8187 | 6.088350 | GCGCCTTTTTATATTGAAAAACGTGA | 59.912 | 34.615 | 0.00 | 0.00 | 34.23 | 4.35 |
5323 | 8188 | 6.088883 | AGCGCCTTTTTATATTGAAAAACGTG | 59.911 | 34.615 | 2.29 | 9.22 | 34.23 | 4.49 |
5324 | 8189 | 6.153756 | AGCGCCTTTTTATATTGAAAAACGT | 58.846 | 32.000 | 2.29 | 0.00 | 34.23 | 3.99 |
5325 | 8190 | 6.626199 | AGCGCCTTTTTATATTGAAAAACG | 57.374 | 33.333 | 2.29 | 11.01 | 34.23 | 3.60 |
5326 | 8191 | 7.482428 | TCGTAGCGCCTTTTTATATTGAAAAAC | 59.518 | 33.333 | 2.29 | 0.00 | 34.23 | 2.43 |
5345 | 8213 | 3.532892 | AGTACGTGGAATATCGTAGCG | 57.467 | 47.619 | 0.00 | 0.00 | 41.90 | 4.26 |
5362 | 8230 | 1.509463 | CTGCCCTTCACGCGTAGTA | 59.491 | 57.895 | 13.44 | 0.00 | 0.00 | 1.82 |
5363 | 8231 | 2.261671 | CTGCCCTTCACGCGTAGT | 59.738 | 61.111 | 13.44 | 0.00 | 0.00 | 2.73 |
5364 | 8232 | 2.509336 | CCTGCCCTTCACGCGTAG | 60.509 | 66.667 | 13.44 | 6.77 | 0.00 | 3.51 |
5376 | 8244 | 1.217244 | CTTTGCTTGATGGCCTGCC | 59.783 | 57.895 | 3.32 | 0.00 | 0.00 | 4.85 |
5411 | 8279 | 3.505680 | TGGAAGCTGTTATTGCGTTCAAT | 59.494 | 39.130 | 0.00 | 0.00 | 44.52 | 2.57 |
5412 | 8280 | 2.881513 | TGGAAGCTGTTATTGCGTTCAA | 59.118 | 40.909 | 0.00 | 0.00 | 36.51 | 2.69 |
5417 | 8285 | 2.584791 | GTGTTGGAAGCTGTTATTGCG | 58.415 | 47.619 | 0.00 | 0.00 | 35.28 | 4.85 |
5431 | 8299 | 1.069596 | GCAAAGCTTGGGGTGTTGG | 59.930 | 57.895 | 0.00 | 0.00 | 0.00 | 3.77 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.