Multiple sequence alignment - TraesCS3A01G376500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G376500 chr3A 100.000 5813 0 0 1 5813 625325490 625319678 0.000000e+00 10735.0
1 TraesCS3A01G376500 chr3A 83.885 453 65 5 549 994 667085101 667084650 5.380000e-115 425.0
2 TraesCS3A01G376500 chr3A 89.773 88 9 0 4214 4301 742282744 742282831 4.760000e-21 113.0
3 TraesCS3A01G376500 chr3D 94.177 2267 111 9 3550 5813 482251724 482249476 0.000000e+00 3435.0
4 TraesCS3A01G376500 chr3D 94.312 1547 60 10 510 2036 482253997 482252459 0.000000e+00 2344.0
5 TraesCS3A01G376500 chr3D 94.511 747 36 4 2508 3250 482252466 482251721 0.000000e+00 1147.0
6 TraesCS3A01G376500 chr3D 94.695 509 19 4 1 508 482254591 482254090 0.000000e+00 784.0
7 TraesCS3A01G376500 chr3D 87.126 668 69 12 1280 1935 61357849 61357187 0.000000e+00 741.0
8 TraesCS3A01G376500 chr3D 82.275 677 88 20 2511 3167 61357099 61356435 1.830000e-154 556.0
9 TraesCS3A01G376500 chr3D 84.430 456 70 1 3288 3742 61346894 61346439 1.150000e-121 448.0
10 TraesCS3A01G376500 chr3D 85.519 366 49 3 4829 5192 61345768 61345405 4.250000e-101 379.0
11 TraesCS3A01G376500 chr3B 89.035 2581 201 29 3250 5813 644503362 644500847 0.000000e+00 3123.0
12 TraesCS3A01G376500 chr3B 86.119 670 73 14 1282 1938 793090834 793091496 0.000000e+00 704.0
13 TraesCS3A01G376500 chr2B 84.898 1576 192 35 2860 4425 535288756 535290295 0.000000e+00 1550.0
14 TraesCS3A01G376500 chr2B 85.665 1151 107 25 806 1937 535269363 535270474 0.000000e+00 1158.0
15 TraesCS3A01G376500 chr2B 86.072 718 75 10 540 1234 26861450 26862165 0.000000e+00 749.0
16 TraesCS3A01G376500 chr2B 90.816 490 34 7 2037 2521 435008789 435008306 0.000000e+00 645.0
17 TraesCS3A01G376500 chr2B 80.470 681 96 25 2511 3167 726074768 726074101 2.430000e-133 486.0
18 TraesCS3A01G376500 chr2B 81.518 514 92 3 3236 3747 175491717 175491205 2.500000e-113 420.0
19 TraesCS3A01G376500 chr2B 89.848 197 19 1 2668 2864 535270922 535271117 9.670000e-63 252.0
20 TraesCS3A01G376500 chr2B 88.991 109 12 0 2512 2620 535270543 535270651 1.020000e-27 135.0
21 TraesCS3A01G376500 chr5D 84.535 1526 171 29 549 2035 441320172 441318673 0.000000e+00 1450.0
22 TraesCS3A01G376500 chr5D 80.685 818 119 22 2511 3316 441318675 441317885 3.000000e-167 599.0
23 TraesCS3A01G376500 chr5D 83.626 513 83 1 3231 3742 441317877 441317365 1.130000e-131 481.0
24 TraesCS3A01G376500 chr5D 84.925 398 56 3 4797 5192 441316724 441316329 3.260000e-107 399.0
25 TraesCS3A01G376500 chr4B 85.497 1379 147 22 678 2022 101048022 101049381 0.000000e+00 1389.0
26 TraesCS3A01G376500 chr4B 85.124 363 35 11 2514 2873 101049392 101049738 2.580000e-93 353.0
27 TraesCS3A01G376500 chr5A 84.174 1428 156 27 549 1938 474626957 474625562 0.000000e+00 1321.0
28 TraesCS3A01G376500 chr5A 82.525 1093 149 25 3236 4310 474624673 474623605 0.000000e+00 922.0
29 TraesCS3A01G376500 chr5A 81.620 827 105 20 2511 3321 474625476 474624681 4.910000e-180 641.0
30 TraesCS3A01G376500 chr5A 80.918 828 114 28 4618 5438 474623529 474622739 1.070000e-171 614.0
31 TraesCS3A01G376500 chr4A 82.500 1440 177 35 549 1950 650289087 650287685 0.000000e+00 1194.0
32 TraesCS3A01G376500 chr4A 81.057 681 92 22 2511 3167 650287610 650286943 5.200000e-140 508.0
33 TraesCS3A01G376500 chr7A 82.682 1357 163 37 625 1950 450669393 450668078 0.000000e+00 1138.0
34 TraesCS3A01G376500 chr7A 85.736 673 75 16 1280 1938 75230287 75230952 0.000000e+00 691.0
35 TraesCS3A01G376500 chr7A 82.122 509 89 2 3236 3742 450667264 450666756 8.950000e-118 435.0
36 TraesCS3A01G376500 chr7A 81.641 512 92 2 3233 3742 75231769 75232280 1.940000e-114 424.0
37 TraesCS3A01G376500 chr7A 85.750 400 50 6 4797 5192 75232750 75233146 3.240000e-112 416.0
38 TraesCS3A01G376500 chr7A 87.123 365 44 3 4830 5192 450666254 450665891 1.510000e-110 411.0
39 TraesCS3A01G376500 chr5B 85.503 945 105 11 549 1463 441553792 441552850 0.000000e+00 957.0
40 TraesCS3A01G376500 chr5B 82.557 1095 148 33 3236 4313 441551527 441550459 0.000000e+00 924.0
41 TraesCS3A01G376500 chr5B 82.147 829 96 24 2511 3321 441552329 441551535 0.000000e+00 664.0
42 TraesCS3A01G376500 chr5B 92.034 477 29 5 2036 2509 604706624 604706154 0.000000e+00 662.0
43 TraesCS3A01G376500 chr5B 90.612 490 35 5 2027 2511 340992436 340992919 1.770000e-179 640.0
44 TraesCS3A01G376500 chr5B 80.153 786 116 22 4618 5396 441550383 441549631 8.510000e-153 551.0
45 TraesCS3A01G376500 chr1D 87.054 672 69 14 1280 1938 461059502 461060168 0.000000e+00 743.0
46 TraesCS3A01G376500 chr1D 84.384 730 80 11 549 1253 461058780 461059500 0.000000e+00 686.0
47 TraesCS3A01G376500 chr1D 85.176 398 55 4 4797 5192 461062124 461062519 7.010000e-109 405.0
48 TraesCS3A01G376500 chr1D 81.922 437 53 17 3887 4302 461061588 461062019 4.310000e-91 346.0
49 TraesCS3A01G376500 chr6A 84.197 772 94 19 1280 2035 456007993 456007234 0.000000e+00 725.0
50 TraesCS3A01G376500 chr6A 82.101 514 90 2 3231 3742 456006429 456005916 6.920000e-119 438.0
51 TraesCS3A01G376500 chr7D 84.384 730 80 12 549 1253 423307012 423307732 0.000000e+00 686.0
52 TraesCS3A01G376500 chr7D 81.961 510 90 2 3233 3742 423309285 423309792 1.160000e-116 431.0
53 TraesCS3A01G376500 chr7D 79.705 542 75 25 3786 4302 423309796 423310327 5.540000e-95 359.0
54 TraesCS3A01G376500 chr4D 92.034 477 29 5 2036 2509 368547708 368547238 0.000000e+00 662.0
55 TraesCS3A01G376500 chr4D 91.423 478 32 4 2036 2510 331590964 331590493 0.000000e+00 647.0
56 TraesCS3A01G376500 chr6B 92.340 470 25 6 2037 2502 500605599 500606061 0.000000e+00 658.0
57 TraesCS3A01G376500 chr6B 91.932 471 29 5 2037 2504 576988232 576988696 0.000000e+00 651.0
58 TraesCS3A01G376500 chr6B 78.663 778 119 26 2551 3316 662477933 662477191 1.900000e-129 473.0
59 TraesCS3A01G376500 chr6B 79.554 538 79 23 3786 4300 662476665 662476136 7.160000e-94 355.0
60 TraesCS3A01G376500 chr2D 91.789 475 31 5 2037 2509 34759779 34760247 0.000000e+00 654.0
61 TraesCS3A01G376500 chr2D 91.561 474 32 4 2036 2507 625448117 625447650 0.000000e+00 647.0
62 TraesCS3A01G376500 chr2D 77.381 420 81 10 10 419 413277564 413277149 2.710000e-58 237.0
63 TraesCS3A01G376500 chr6D 89.855 69 6 1 26 93 418671437 418671505 2.890000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G376500 chr3A 625319678 625325490 5812 True 10735.000000 10735 100.000000 1 5813 1 chr3A.!!$R1 5812
1 TraesCS3A01G376500 chr3D 482249476 482254591 5115 True 1927.500000 3435 94.423750 1 5813 4 chr3D.!!$R3 5812
2 TraesCS3A01G376500 chr3D 61356435 61357849 1414 True 648.500000 741 84.700500 1280 3167 2 chr3D.!!$R2 1887
3 TraesCS3A01G376500 chr3D 61345405 61346894 1489 True 413.500000 448 84.974500 3288 5192 2 chr3D.!!$R1 1904
4 TraesCS3A01G376500 chr3B 644500847 644503362 2515 True 3123.000000 3123 89.035000 3250 5813 1 chr3B.!!$R1 2563
5 TraesCS3A01G376500 chr3B 793090834 793091496 662 False 704.000000 704 86.119000 1282 1938 1 chr3B.!!$F1 656
6 TraesCS3A01G376500 chr2B 535288756 535290295 1539 False 1550.000000 1550 84.898000 2860 4425 1 chr2B.!!$F2 1565
7 TraesCS3A01G376500 chr2B 26861450 26862165 715 False 749.000000 749 86.072000 540 1234 1 chr2B.!!$F1 694
8 TraesCS3A01G376500 chr2B 535269363 535271117 1754 False 515.000000 1158 88.168000 806 2864 3 chr2B.!!$F3 2058
9 TraesCS3A01G376500 chr2B 726074101 726074768 667 True 486.000000 486 80.470000 2511 3167 1 chr2B.!!$R3 656
10 TraesCS3A01G376500 chr2B 175491205 175491717 512 True 420.000000 420 81.518000 3236 3747 1 chr2B.!!$R1 511
11 TraesCS3A01G376500 chr5D 441316329 441320172 3843 True 732.250000 1450 83.442750 549 5192 4 chr5D.!!$R1 4643
12 TraesCS3A01G376500 chr4B 101048022 101049738 1716 False 871.000000 1389 85.310500 678 2873 2 chr4B.!!$F1 2195
13 TraesCS3A01G376500 chr5A 474622739 474626957 4218 True 874.500000 1321 82.309250 549 5438 4 chr5A.!!$R1 4889
14 TraesCS3A01G376500 chr4A 650286943 650289087 2144 True 851.000000 1194 81.778500 549 3167 2 chr4A.!!$R1 2618
15 TraesCS3A01G376500 chr7A 450665891 450669393 3502 True 661.333333 1138 83.975667 625 5192 3 chr7A.!!$R1 4567
16 TraesCS3A01G376500 chr7A 75230287 75233146 2859 False 510.333333 691 84.375667 1280 5192 3 chr7A.!!$F1 3912
17 TraesCS3A01G376500 chr5B 441549631 441553792 4161 True 774.000000 957 82.590000 549 5396 4 chr5B.!!$R2 4847
18 TraesCS3A01G376500 chr1D 461058780 461062519 3739 False 545.000000 743 84.634000 549 5192 4 chr1D.!!$F1 4643
19 TraesCS3A01G376500 chr6A 456005916 456007993 2077 True 581.500000 725 83.149000 1280 3742 2 chr6A.!!$R1 2462
20 TraesCS3A01G376500 chr7D 423307012 423310327 3315 False 492.000000 686 82.016667 549 4302 3 chr7D.!!$F1 3753
21 TraesCS3A01G376500 chr6B 662476136 662477933 1797 True 414.000000 473 79.108500 2551 4300 2 chr6B.!!$R1 1749

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
900 1007 0.108615 CTTCGGGAGATCAAGTGCGT 60.109 55.000 0.0 0.0 39.57 5.24 F
1173 1304 0.674895 AGTTCAAGCGGATGTGGCTC 60.675 55.000 0.0 0.0 40.53 4.70 F
1837 2032 2.107366 CCAGTTGAAACCCCAGTTTGT 58.893 47.619 0.0 0.0 46.25 2.83 F
3126 3597 0.317603 AACGACAACGACGACTCTGG 60.318 55.000 0.0 0.0 42.66 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2057 2283 0.376152 GCTGACCGAGACGATAACGA 59.624 55.0 0.00 0.00 42.66 3.85 R
2058 2284 0.377554 AGCTGACCGAGACGATAACG 59.622 55.0 0.00 0.00 45.75 3.18 R
3561 4157 0.179062 CCTATCTGACAGCTGGGCAC 60.179 60.0 19.93 7.07 0.00 5.01 R
5065 5868 0.514691 GCGAGCTCTTCAACAACAGG 59.485 55.0 12.85 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.375922 CGGGTCAAAGTTACAGTTGTGTT 59.624 43.478 0.00 0.00 38.19 3.32
62 64 7.646922 CAGTAATCAGGTCTACGGTGTATAAAC 59.353 40.741 0.00 0.00 0.00 2.01
138 140 6.283694 TGATCTATGTGAAGCAGTATGGAAC 58.716 40.000 0.00 0.00 35.86 3.62
145 147 2.113860 AGCAGTATGGAACGTGCAAT 57.886 45.000 0.00 0.00 35.77 3.56
265 267 3.440872 GTGTGTACCTTGTGACAAACCAA 59.559 43.478 0.00 0.00 28.97 3.67
288 290 6.084326 ACAAATTAGCCTAGTTGGTTGTTG 57.916 37.500 1.73 0.00 38.35 3.33
291 293 4.425180 TTAGCCTAGTTGGTTGTTGTCA 57.575 40.909 0.00 0.00 38.35 3.58
338 340 3.627395 TCGATTCCCTGCTACAACAAT 57.373 42.857 0.00 0.00 0.00 2.71
400 402 7.776618 AAAAATCCCCTATAAAATCGGATCC 57.223 36.000 0.00 0.00 32.05 3.36
425 427 6.128035 CCATTAAAGTGTCATCAATTCCACGA 60.128 38.462 0.00 0.00 30.42 4.35
436 438 0.378257 ATTCCACGACGCATGATTGC 59.622 50.000 0.00 0.00 45.78 3.56
456 458 4.068599 TGCAAAGTCATTAATCACGACCA 58.931 39.130 0.00 0.00 0.00 4.02
473 475 3.731867 CGACCACAGAAAATTAGGCATGC 60.732 47.826 9.90 9.90 0.00 4.06
492 494 6.074676 GGCATGCGATCAAAAAGTCATTAATC 60.075 38.462 12.44 0.00 0.00 1.75
493 495 6.344468 GCATGCGATCAAAAAGTCATTAATCG 60.344 38.462 0.00 0.00 37.99 3.34
522 615 9.699410 ATCATTAAAGGTAGATCACAAAATCCA 57.301 29.630 0.00 0.00 0.00 3.41
528 621 5.127682 AGGTAGATCACAAAATCCAAATGCC 59.872 40.000 0.00 0.00 0.00 4.40
605 698 6.418101 ACCAGTCTCATGCATACAAATTACT 58.582 36.000 0.00 0.00 0.00 2.24
630 728 4.752604 GTGGTTTTGTTGAGTTGTTGGTTT 59.247 37.500 0.00 0.00 0.00 3.27
674 773 6.371809 TTCGCAACTCTTTAATTGTCAGTT 57.628 33.333 0.00 0.00 0.00 3.16
847 953 6.037610 CCTGTAAAGATTTGTCTGATGGTAGC 59.962 42.308 0.00 0.00 0.00 3.58
900 1007 0.108615 CTTCGGGAGATCAAGTGCGT 60.109 55.000 0.00 0.00 39.57 5.24
1091 1219 3.490439 TGAGATGTTTGGTGAGCTTGA 57.510 42.857 0.00 0.00 0.00 3.02
1173 1304 0.674895 AGTTCAAGCGGATGTGGCTC 60.675 55.000 0.00 0.00 40.53 4.70
1211 1342 3.198068 CTGTCATTGCGCCTACTACATT 58.802 45.455 4.18 0.00 0.00 2.71
1261 1392 6.655848 TGGTGTGTTGGTAAGTATTTCCATAC 59.344 38.462 0.00 0.00 45.26 2.39
1511 1676 4.831107 TCTACAATGTAAGTGATGCTGCA 58.169 39.130 4.13 4.13 34.17 4.41
1574 1758 3.252215 CGACATTCACCTTTTTACCAGCA 59.748 43.478 0.00 0.00 0.00 4.41
1614 1798 9.331282 GCAATTGATCTTACTAGTCTTGGTATT 57.669 33.333 10.34 0.00 0.00 1.89
1837 2032 2.107366 CCAGTTGAAACCCCAGTTTGT 58.893 47.619 0.00 0.00 46.25 2.83
2012 2238 8.892723 TCTTGCATTTACATGGTAACTTATGAG 58.107 33.333 0.00 0.00 37.61 2.90
2032 2258 7.676683 ATGAGTGTACACCCTCATAACTATT 57.323 36.000 22.52 2.67 44.48 1.73
2033 2259 7.490657 TGAGTGTACACCCTCATAACTATTT 57.509 36.000 22.28 0.00 32.93 1.40
2034 2260 7.913789 TGAGTGTACACCCTCATAACTATTTT 58.086 34.615 22.28 0.00 32.93 1.82
2035 2261 7.822334 TGAGTGTACACCCTCATAACTATTTTG 59.178 37.037 22.28 0.00 32.93 2.44
2036 2262 6.598064 AGTGTACACCCTCATAACTATTTTGC 59.402 38.462 22.28 0.00 0.00 3.68
2037 2263 6.373216 GTGTACACCCTCATAACTATTTTGCA 59.627 38.462 15.42 0.00 0.00 4.08
2038 2264 6.943146 TGTACACCCTCATAACTATTTTGCAA 59.057 34.615 0.00 0.00 0.00 4.08
2039 2265 7.613801 TGTACACCCTCATAACTATTTTGCAAT 59.386 33.333 0.00 0.00 0.00 3.56
2040 2266 6.866480 ACACCCTCATAACTATTTTGCAATG 58.134 36.000 0.00 0.00 0.00 2.82
2041 2267 6.437162 ACACCCTCATAACTATTTTGCAATGT 59.563 34.615 0.00 0.00 0.00 2.71
2042 2268 7.039082 ACACCCTCATAACTATTTTGCAATGTT 60.039 33.333 0.00 6.44 0.00 2.71
2043 2269 7.276218 CACCCTCATAACTATTTTGCAATGTTG 59.724 37.037 0.00 0.00 0.00 3.33
2044 2270 7.178274 ACCCTCATAACTATTTTGCAATGTTGA 59.822 33.333 0.00 0.00 0.00 3.18
2045 2271 7.703621 CCCTCATAACTATTTTGCAATGTTGAG 59.296 37.037 0.00 8.14 0.00 3.02
2046 2272 7.703621 CCTCATAACTATTTTGCAATGTTGAGG 59.296 37.037 18.10 18.10 29.55 3.86
2047 2273 8.347004 TCATAACTATTTTGCAATGTTGAGGA 57.653 30.769 0.00 1.76 0.00 3.71
2048 2274 8.970020 TCATAACTATTTTGCAATGTTGAGGAT 58.030 29.630 0.00 0.00 0.00 3.24
2052 2278 7.642669 ACTATTTTGCAATGTTGAGGATATCG 58.357 34.615 0.00 0.00 0.00 2.92
2053 2279 3.969117 TTGCAATGTTGAGGATATCGC 57.031 42.857 0.00 0.00 0.00 4.58
2054 2280 3.198409 TGCAATGTTGAGGATATCGCT 57.802 42.857 0.00 0.00 0.00 4.93
2055 2281 3.544684 TGCAATGTTGAGGATATCGCTT 58.455 40.909 0.00 0.00 0.00 4.68
2056 2282 4.702831 TGCAATGTTGAGGATATCGCTTA 58.297 39.130 0.00 0.00 0.00 3.09
2057 2283 5.308014 TGCAATGTTGAGGATATCGCTTAT 58.692 37.500 0.00 0.00 0.00 1.73
2058 2284 5.409520 TGCAATGTTGAGGATATCGCTTATC 59.590 40.000 0.00 0.00 36.70 1.75
2059 2285 5.445142 GCAATGTTGAGGATATCGCTTATCG 60.445 44.000 0.00 0.00 38.08 2.92
2060 2286 4.848562 TGTTGAGGATATCGCTTATCGT 57.151 40.909 0.00 1.59 38.08 3.73
2061 2287 5.196341 TGTTGAGGATATCGCTTATCGTT 57.804 39.130 0.00 0.00 38.08 3.85
2062 2288 6.321848 TGTTGAGGATATCGCTTATCGTTA 57.678 37.500 0.00 0.00 38.08 3.18
2063 2289 6.920817 TGTTGAGGATATCGCTTATCGTTAT 58.079 36.000 0.00 0.00 38.08 1.89
2064 2290 7.027760 TGTTGAGGATATCGCTTATCGTTATC 58.972 38.462 0.00 6.78 43.74 1.75
2065 2291 5.807344 TGAGGATATCGCTTATCGTTATCG 58.193 41.667 0.00 0.00 44.64 2.92
2066 2292 5.353400 TGAGGATATCGCTTATCGTTATCGT 59.647 40.000 9.08 9.08 44.64 3.73
2067 2293 5.808403 AGGATATCGCTTATCGTTATCGTC 58.192 41.667 0.00 0.00 44.64 4.20
2068 2294 5.585445 AGGATATCGCTTATCGTTATCGTCT 59.415 40.000 0.00 1.49 44.64 4.18
2069 2295 5.902981 GGATATCGCTTATCGTTATCGTCTC 59.097 44.000 0.00 0.00 44.64 3.36
2070 2296 3.165031 TCGCTTATCGTTATCGTCTCG 57.835 47.619 0.00 0.00 39.67 4.04
2071 2297 2.096565 TCGCTTATCGTTATCGTCTCGG 60.097 50.000 0.00 0.00 39.67 4.63
2072 2298 2.349249 CGCTTATCGTTATCGTCTCGGT 60.349 50.000 0.00 0.00 38.33 4.69
2073 2299 3.224750 GCTTATCGTTATCGTCTCGGTC 58.775 50.000 0.00 0.00 38.33 4.79
2074 2300 3.303593 GCTTATCGTTATCGTCTCGGTCA 60.304 47.826 0.00 0.00 38.33 4.02
2075 2301 4.456019 CTTATCGTTATCGTCTCGGTCAG 58.544 47.826 0.00 0.00 38.33 3.51
2076 2302 0.376152 TCGTTATCGTCTCGGTCAGC 59.624 55.000 0.00 0.00 38.33 4.26
2077 2303 0.377554 CGTTATCGTCTCGGTCAGCT 59.622 55.000 0.00 0.00 0.00 4.24
2078 2304 1.596260 CGTTATCGTCTCGGTCAGCTA 59.404 52.381 0.00 0.00 0.00 3.32
2079 2305 2.348685 CGTTATCGTCTCGGTCAGCTAG 60.349 54.545 0.00 0.00 0.00 3.42
2080 2306 1.880271 TATCGTCTCGGTCAGCTAGG 58.120 55.000 0.00 0.00 0.00 3.02
2081 2307 0.820074 ATCGTCTCGGTCAGCTAGGG 60.820 60.000 0.00 0.00 0.00 3.53
2082 2308 1.451567 CGTCTCGGTCAGCTAGGGA 60.452 63.158 0.00 0.00 0.00 4.20
2083 2309 0.820074 CGTCTCGGTCAGCTAGGGAT 60.820 60.000 0.00 0.00 0.00 3.85
2084 2310 1.404843 GTCTCGGTCAGCTAGGGATT 58.595 55.000 0.00 0.00 0.00 3.01
2085 2311 2.584236 GTCTCGGTCAGCTAGGGATTA 58.416 52.381 0.00 0.00 0.00 1.75
2086 2312 2.554893 GTCTCGGTCAGCTAGGGATTAG 59.445 54.545 0.00 0.00 0.00 1.73
2087 2313 2.442126 TCTCGGTCAGCTAGGGATTAGA 59.558 50.000 0.00 0.00 0.00 2.10
2088 2314 2.817258 CTCGGTCAGCTAGGGATTAGAG 59.183 54.545 0.00 0.00 0.00 2.43
2089 2315 2.442126 TCGGTCAGCTAGGGATTAGAGA 59.558 50.000 0.00 0.00 0.00 3.10
2090 2316 3.074687 TCGGTCAGCTAGGGATTAGAGAT 59.925 47.826 0.00 0.00 0.00 2.75
2091 2317 3.829601 CGGTCAGCTAGGGATTAGAGATT 59.170 47.826 0.00 0.00 0.00 2.40
2092 2318 5.010933 CGGTCAGCTAGGGATTAGAGATTA 58.989 45.833 0.00 0.00 0.00 1.75
2093 2319 5.477291 CGGTCAGCTAGGGATTAGAGATTAA 59.523 44.000 0.00 0.00 0.00 1.40
2094 2320 6.153680 CGGTCAGCTAGGGATTAGAGATTAAT 59.846 42.308 0.00 0.00 0.00 1.40
2095 2321 7.552459 GGTCAGCTAGGGATTAGAGATTAATC 58.448 42.308 7.41 7.41 34.19 1.75
2096 2322 7.254852 GTCAGCTAGGGATTAGAGATTAATCG 58.745 42.308 9.78 0.00 35.39 3.34
2097 2323 6.378564 TCAGCTAGGGATTAGAGATTAATCGG 59.621 42.308 9.78 0.00 35.39 4.18
2098 2324 6.378564 CAGCTAGGGATTAGAGATTAATCGGA 59.621 42.308 9.78 0.00 35.39 4.55
2099 2325 6.954684 AGCTAGGGATTAGAGATTAATCGGAA 59.045 38.462 9.78 6.09 35.39 4.30
2100 2326 7.455008 AGCTAGGGATTAGAGATTAATCGGAAA 59.545 37.037 9.78 5.95 35.39 3.13
2101 2327 8.261522 GCTAGGGATTAGAGATTAATCGGAAAT 58.738 37.037 9.78 10.03 35.39 2.17
2102 2328 9.810545 CTAGGGATTAGAGATTAATCGGAAATC 57.189 37.037 20.20 20.20 35.39 2.17
2103 2329 7.324178 AGGGATTAGAGATTAATCGGAAATCG 58.676 38.462 20.87 0.00 38.20 3.34
2104 2330 6.535508 GGGATTAGAGATTAATCGGAAATCGG 59.464 42.308 20.87 0.00 38.20 4.18
2105 2331 6.036191 GGATTAGAGATTAATCGGAAATCGGC 59.964 42.308 20.87 12.19 38.20 5.54
2106 2332 3.665190 AGAGATTAATCGGAAATCGGCC 58.335 45.455 9.78 0.00 38.20 6.13
2117 2343 4.766404 GGAAATCGGCCGATAAATCAAT 57.234 40.909 39.08 20.34 33.97 2.57
2118 2344 5.121221 GGAAATCGGCCGATAAATCAATT 57.879 39.130 39.08 27.14 33.97 2.32
2119 2345 5.528870 GGAAATCGGCCGATAAATCAATTT 58.471 37.500 39.08 27.01 33.97 1.82
2120 2346 5.983118 GGAAATCGGCCGATAAATCAATTTT 59.017 36.000 39.08 26.30 33.97 1.82
2121 2347 7.142680 GGAAATCGGCCGATAAATCAATTTTA 58.857 34.615 39.08 8.63 33.97 1.52
2122 2348 7.812669 GGAAATCGGCCGATAAATCAATTTTAT 59.187 33.333 39.08 17.26 42.05 1.40
2123 2349 8.742554 AAATCGGCCGATAAATCAATTTTATC 57.257 30.769 39.08 7.65 46.84 1.75
2139 2365 8.908678 TCAATTTTATCGGTCGACTATTAATCG 58.091 33.333 16.46 8.63 41.00 3.34
2140 2366 7.807687 ATTTTATCGGTCGACTATTAATCGG 57.192 36.000 16.46 0.00 40.05 4.18
2141 2367 6.558771 TTTATCGGTCGACTATTAATCGGA 57.441 37.500 16.46 0.00 40.05 4.55
2142 2368 6.748333 TTATCGGTCGACTATTAATCGGAT 57.252 37.500 16.46 4.78 40.05 4.18
2143 2369 7.848223 TTATCGGTCGACTATTAATCGGATA 57.152 36.000 16.46 3.84 40.05 2.59
2144 2370 6.939132 ATCGGTCGACTATTAATCGGATAT 57.061 37.500 16.46 0.00 40.05 1.63
2145 2371 6.748333 TCGGTCGACTATTAATCGGATATT 57.252 37.500 16.46 0.00 40.05 1.28
2146 2372 7.149569 TCGGTCGACTATTAATCGGATATTT 57.850 36.000 16.46 0.00 40.05 1.40
2147 2373 7.596494 TCGGTCGACTATTAATCGGATATTTT 58.404 34.615 16.46 0.00 40.05 1.82
2148 2374 8.084073 TCGGTCGACTATTAATCGGATATTTTT 58.916 33.333 16.46 0.00 40.05 1.94
2168 2394 6.398234 TTTTTGAAAATCTCATGTTCCCGA 57.602 33.333 0.00 0.00 32.78 5.14
2169 2395 5.371115 TTTGAAAATCTCATGTTCCCGAC 57.629 39.130 0.00 0.00 32.78 4.79
2170 2396 4.014569 TGAAAATCTCATGTTCCCGACA 57.985 40.909 0.00 0.00 43.71 4.35
2171 2397 3.751175 TGAAAATCTCATGTTCCCGACAC 59.249 43.478 0.00 0.00 42.04 3.67
2172 2398 3.703001 AAATCTCATGTTCCCGACACT 57.297 42.857 0.00 0.00 42.04 3.55
2173 2399 4.819105 AAATCTCATGTTCCCGACACTA 57.181 40.909 0.00 0.00 42.04 2.74
2174 2400 4.819105 AATCTCATGTTCCCGACACTAA 57.181 40.909 0.00 0.00 42.04 2.24
2175 2401 4.819105 ATCTCATGTTCCCGACACTAAA 57.181 40.909 0.00 0.00 42.04 1.85
2176 2402 4.610605 TCTCATGTTCCCGACACTAAAA 57.389 40.909 0.00 0.00 42.04 1.52
2177 2403 5.160607 TCTCATGTTCCCGACACTAAAAT 57.839 39.130 0.00 0.00 42.04 1.82
2178 2404 6.288941 TCTCATGTTCCCGACACTAAAATA 57.711 37.500 0.00 0.00 42.04 1.40
2179 2405 6.103997 TCTCATGTTCCCGACACTAAAATAC 58.896 40.000 0.00 0.00 42.04 1.89
2180 2406 5.795972 TCATGTTCCCGACACTAAAATACA 58.204 37.500 0.00 0.00 42.04 2.29
2181 2407 5.640357 TCATGTTCCCGACACTAAAATACAC 59.360 40.000 0.00 0.00 42.04 2.90
2182 2408 5.217978 TGTTCCCGACACTAAAATACACT 57.782 39.130 0.00 0.00 32.00 3.55
2183 2409 6.343716 TGTTCCCGACACTAAAATACACTA 57.656 37.500 0.00 0.00 32.00 2.74
2184 2410 6.938507 TGTTCCCGACACTAAAATACACTAT 58.061 36.000 0.00 0.00 32.00 2.12
2185 2411 8.065473 TGTTCCCGACACTAAAATACACTATA 57.935 34.615 0.00 0.00 32.00 1.31
2186 2412 8.698210 TGTTCCCGACACTAAAATACACTATAT 58.302 33.333 0.00 0.00 32.00 0.86
2187 2413 9.538508 GTTCCCGACACTAAAATACACTATATT 57.461 33.333 0.00 0.00 0.00 1.28
2188 2414 9.754382 TTCCCGACACTAAAATACACTATATTC 57.246 33.333 0.00 0.00 0.00 1.75
2189 2415 8.916062 TCCCGACACTAAAATACACTATATTCA 58.084 33.333 0.00 0.00 0.00 2.57
2190 2416 9.537192 CCCGACACTAAAATACACTATATTCAA 57.463 33.333 0.00 0.00 0.00 2.69
2210 2436 8.954950 ATTCAACACCAAAACAATATTTGACA 57.045 26.923 1.56 0.00 41.73 3.58
2211 2437 8.417780 TTCAACACCAAAACAATATTTGACAG 57.582 30.769 1.56 0.00 41.73 3.51
2212 2438 7.776107 TCAACACCAAAACAATATTTGACAGA 58.224 30.769 1.56 0.00 41.73 3.41
2213 2439 8.253810 TCAACACCAAAACAATATTTGACAGAA 58.746 29.630 1.56 0.00 41.73 3.02
2214 2440 8.542132 CAACACCAAAACAATATTTGACAGAAG 58.458 33.333 1.56 0.00 41.73 2.85
2215 2441 7.781056 ACACCAAAACAATATTTGACAGAAGT 58.219 30.769 1.56 0.00 41.73 3.01
2216 2442 7.706179 ACACCAAAACAATATTTGACAGAAGTG 59.294 33.333 1.56 3.19 41.73 3.16
2217 2443 7.706179 CACCAAAACAATATTTGACAGAAGTGT 59.294 33.333 1.56 0.00 41.73 3.55
2218 2444 8.257306 ACCAAAACAATATTTGACAGAAGTGTT 58.743 29.630 1.56 0.00 41.73 3.32
2219 2445 9.743057 CCAAAACAATATTTGACAGAAGTGTTA 57.257 29.630 1.56 0.00 41.73 2.41
2221 2447 9.744468 AAAACAATATTTGACAGAAGTGTTACC 57.256 29.630 0.00 0.00 36.88 2.85
2222 2448 8.691661 AACAATATTTGACAGAAGTGTTACCT 57.308 30.769 0.00 0.00 36.88 3.08
2223 2449 8.691661 ACAATATTTGACAGAAGTGTTACCTT 57.308 30.769 0.00 0.00 36.88 3.50
2224 2450 8.567948 ACAATATTTGACAGAAGTGTTACCTTG 58.432 33.333 0.00 0.00 36.88 3.61
2225 2451 8.783093 CAATATTTGACAGAAGTGTTACCTTGA 58.217 33.333 0.00 0.00 36.88 3.02
2226 2452 9.520515 AATATTTGACAGAAGTGTTACCTTGAT 57.479 29.630 0.00 0.00 36.88 2.57
2227 2453 7.823745 ATTTGACAGAAGTGTTACCTTGATT 57.176 32.000 0.00 0.00 36.88 2.57
2228 2454 7.639113 TTTGACAGAAGTGTTACCTTGATTT 57.361 32.000 0.00 0.00 36.88 2.17
2229 2455 6.861065 TGACAGAAGTGTTACCTTGATTTC 57.139 37.500 0.00 0.00 36.88 2.17
2230 2456 6.591935 TGACAGAAGTGTTACCTTGATTTCT 58.408 36.000 0.00 0.00 36.88 2.52
2231 2457 7.732025 TGACAGAAGTGTTACCTTGATTTCTA 58.268 34.615 0.00 0.00 36.88 2.10
2232 2458 7.872993 TGACAGAAGTGTTACCTTGATTTCTAG 59.127 37.037 0.00 0.00 36.88 2.43
2233 2459 6.651225 ACAGAAGTGTTACCTTGATTTCTAGC 59.349 38.462 0.00 0.00 30.30 3.42
2234 2460 6.092807 CAGAAGTGTTACCTTGATTTCTAGCC 59.907 42.308 0.00 0.00 0.00 3.93
2235 2461 5.763876 AGTGTTACCTTGATTTCTAGCCT 57.236 39.130 0.00 0.00 0.00 4.58
2236 2462 6.128138 AGTGTTACCTTGATTTCTAGCCTT 57.872 37.500 0.00 0.00 0.00 4.35
2237 2463 6.543735 AGTGTTACCTTGATTTCTAGCCTTT 58.456 36.000 0.00 0.00 0.00 3.11
2238 2464 6.431234 AGTGTTACCTTGATTTCTAGCCTTTG 59.569 38.462 0.00 0.00 0.00 2.77
2239 2465 6.430000 GTGTTACCTTGATTTCTAGCCTTTGA 59.570 38.462 0.00 0.00 0.00 2.69
2240 2466 7.001674 TGTTACCTTGATTTCTAGCCTTTGAA 58.998 34.615 0.00 0.00 0.00 2.69
2241 2467 7.669722 TGTTACCTTGATTTCTAGCCTTTGAAT 59.330 33.333 0.00 0.00 0.00 2.57
2242 2468 6.765915 ACCTTGATTTCTAGCCTTTGAATC 57.234 37.500 0.00 0.00 0.00 2.52
2243 2469 5.654209 ACCTTGATTTCTAGCCTTTGAATCC 59.346 40.000 0.00 0.00 0.00 3.01
2244 2470 5.890419 CCTTGATTTCTAGCCTTTGAATCCT 59.110 40.000 0.00 0.00 0.00 3.24
2245 2471 6.039159 CCTTGATTTCTAGCCTTTGAATCCTC 59.961 42.308 0.00 0.00 0.00 3.71
2246 2472 5.118990 TGATTTCTAGCCTTTGAATCCTCG 58.881 41.667 0.00 0.00 0.00 4.63
2247 2473 4.553330 TTTCTAGCCTTTGAATCCTCGT 57.447 40.909 0.00 0.00 0.00 4.18
2248 2474 5.670792 TTTCTAGCCTTTGAATCCTCGTA 57.329 39.130 0.00 0.00 0.00 3.43
2249 2475 5.871396 TTCTAGCCTTTGAATCCTCGTAT 57.129 39.130 0.00 0.00 0.00 3.06
2250 2476 6.971726 TTCTAGCCTTTGAATCCTCGTATA 57.028 37.500 0.00 0.00 0.00 1.47
2251 2477 6.971726 TCTAGCCTTTGAATCCTCGTATAA 57.028 37.500 0.00 0.00 0.00 0.98
2252 2478 7.540474 TCTAGCCTTTGAATCCTCGTATAAT 57.460 36.000 0.00 0.00 0.00 1.28
2253 2479 7.378966 TCTAGCCTTTGAATCCTCGTATAATG 58.621 38.462 0.00 0.00 0.00 1.90
2254 2480 5.308825 AGCCTTTGAATCCTCGTATAATGG 58.691 41.667 0.00 0.00 0.00 3.16
2255 2481 4.083271 GCCTTTGAATCCTCGTATAATGGC 60.083 45.833 0.00 0.00 33.30 4.40
2256 2482 5.063204 CCTTTGAATCCTCGTATAATGGCA 58.937 41.667 0.00 0.00 0.00 4.92
2257 2483 5.530915 CCTTTGAATCCTCGTATAATGGCAA 59.469 40.000 0.00 0.00 0.00 4.52
2258 2484 6.039270 CCTTTGAATCCTCGTATAATGGCAAA 59.961 38.462 0.00 0.00 0.00 3.68
2259 2485 7.397892 TTTGAATCCTCGTATAATGGCAAAA 57.602 32.000 0.00 0.00 0.00 2.44
2260 2486 7.397892 TTGAATCCTCGTATAATGGCAAAAA 57.602 32.000 0.00 0.00 0.00 1.94
2289 2515 9.653287 AGGACAACAATACATATACATATTCCG 57.347 33.333 0.00 0.00 0.00 4.30
2290 2516 9.431887 GGACAACAATACATATACATATTCCGT 57.568 33.333 0.00 0.00 0.00 4.69
2300 2526 8.092687 ACATATACATATTCCGTAACAAGGTCC 58.907 37.037 0.00 0.00 0.00 4.46
2301 2527 4.829872 ACATATTCCGTAACAAGGTCCA 57.170 40.909 0.00 0.00 0.00 4.02
2302 2528 4.510571 ACATATTCCGTAACAAGGTCCAC 58.489 43.478 0.00 0.00 0.00 4.02
2303 2529 4.020039 ACATATTCCGTAACAAGGTCCACA 60.020 41.667 0.00 0.00 0.00 4.17
2304 2530 3.495434 ATTCCGTAACAAGGTCCACAA 57.505 42.857 0.00 0.00 0.00 3.33
2305 2531 3.278668 TTCCGTAACAAGGTCCACAAA 57.721 42.857 0.00 0.00 0.00 2.83
2306 2532 3.278668 TCCGTAACAAGGTCCACAAAA 57.721 42.857 0.00 0.00 0.00 2.44
2307 2533 2.944349 TCCGTAACAAGGTCCACAAAAC 59.056 45.455 0.00 0.00 0.00 2.43
2308 2534 2.683867 CCGTAACAAGGTCCACAAAACA 59.316 45.455 0.00 0.00 0.00 2.83
2309 2535 3.316868 CCGTAACAAGGTCCACAAAACAT 59.683 43.478 0.00 0.00 0.00 2.71
2310 2536 4.515944 CCGTAACAAGGTCCACAAAACATA 59.484 41.667 0.00 0.00 0.00 2.29
2311 2537 5.008811 CCGTAACAAGGTCCACAAAACATAA 59.991 40.000 0.00 0.00 0.00 1.90
2312 2538 6.459848 CCGTAACAAGGTCCACAAAACATAAA 60.460 38.462 0.00 0.00 0.00 1.40
2313 2539 7.142680 CGTAACAAGGTCCACAAAACATAAAT 58.857 34.615 0.00 0.00 0.00 1.40
2314 2540 8.291032 CGTAACAAGGTCCACAAAACATAAATA 58.709 33.333 0.00 0.00 0.00 1.40
2315 2541 9.968870 GTAACAAGGTCCACAAAACATAAATAA 57.031 29.630 0.00 0.00 0.00 1.40
2317 2543 8.880878 ACAAGGTCCACAAAACATAAATAAAC 57.119 30.769 0.00 0.00 0.00 2.01
2318 2544 8.478877 ACAAGGTCCACAAAACATAAATAAACA 58.521 29.630 0.00 0.00 0.00 2.83
2319 2545 9.487790 CAAGGTCCACAAAACATAAATAAACAT 57.512 29.630 0.00 0.00 0.00 2.71
2337 2563 8.810652 ATAAACATAGTTTTTGCAAACATCGT 57.189 26.923 12.39 1.97 44.32 3.73
2338 2564 6.509317 AACATAGTTTTTGCAAACATCGTG 57.491 33.333 12.39 10.87 44.32 4.35
2339 2565 4.444056 ACATAGTTTTTGCAAACATCGTGC 59.556 37.500 12.39 0.00 44.32 5.34
2340 2566 3.163630 AGTTTTTGCAAACATCGTGCT 57.836 38.095 12.39 0.00 44.32 4.40
2341 2567 4.300189 AGTTTTTGCAAACATCGTGCTA 57.700 36.364 12.39 0.00 44.32 3.49
2342 2568 4.870363 AGTTTTTGCAAACATCGTGCTAT 58.130 34.783 12.39 0.00 44.32 2.97
2343 2569 4.681025 AGTTTTTGCAAACATCGTGCTATG 59.319 37.500 12.39 0.00 44.32 2.23
2344 2570 4.495911 TTTTGCAAACATCGTGCTATGA 57.504 36.364 12.39 0.00 42.69 2.15
2345 2571 4.495911 TTTGCAAACATCGTGCTATGAA 57.504 36.364 8.05 0.00 42.69 2.57
2346 2572 4.700268 TTGCAAACATCGTGCTATGAAT 57.300 36.364 0.00 0.00 42.69 2.57
2347 2573 5.809719 TTGCAAACATCGTGCTATGAATA 57.190 34.783 0.00 0.00 42.69 1.75
2348 2574 5.408204 TGCAAACATCGTGCTATGAATAG 57.592 39.130 0.00 0.00 42.69 1.73
2349 2575 4.273235 TGCAAACATCGTGCTATGAATAGG 59.727 41.667 0.00 0.00 42.69 2.57
2350 2576 4.273480 GCAAACATCGTGCTATGAATAGGT 59.727 41.667 0.00 0.00 39.00 3.08
2351 2577 5.220854 GCAAACATCGTGCTATGAATAGGTT 60.221 40.000 0.00 0.00 39.00 3.50
2352 2578 6.677920 GCAAACATCGTGCTATGAATAGGTTT 60.678 38.462 0.00 0.00 39.00 3.27
2353 2579 5.991328 ACATCGTGCTATGAATAGGTTTG 57.009 39.130 0.00 0.00 0.00 2.93
2354 2580 5.670485 ACATCGTGCTATGAATAGGTTTGA 58.330 37.500 0.00 0.00 0.00 2.69
2355 2581 6.291377 ACATCGTGCTATGAATAGGTTTGAT 58.709 36.000 0.00 0.00 0.00 2.57
2356 2582 6.767902 ACATCGTGCTATGAATAGGTTTGATT 59.232 34.615 0.00 0.00 0.00 2.57
2357 2583 7.283127 ACATCGTGCTATGAATAGGTTTGATTT 59.717 33.333 0.00 0.00 0.00 2.17
2358 2584 7.246674 TCGTGCTATGAATAGGTTTGATTTC 57.753 36.000 0.00 0.00 0.00 2.17
2359 2585 7.047891 TCGTGCTATGAATAGGTTTGATTTCT 58.952 34.615 0.00 0.00 0.00 2.52
2360 2586 7.224753 TCGTGCTATGAATAGGTTTGATTTCTC 59.775 37.037 0.00 0.00 0.00 2.87
2361 2587 7.348201 GTGCTATGAATAGGTTTGATTTCTCG 58.652 38.462 0.00 0.00 0.00 4.04
2362 2588 6.483307 TGCTATGAATAGGTTTGATTTCTCGG 59.517 38.462 0.00 0.00 0.00 4.63
2363 2589 6.483640 GCTATGAATAGGTTTGATTTCTCGGT 59.516 38.462 0.00 0.00 0.00 4.69
2364 2590 7.656137 GCTATGAATAGGTTTGATTTCTCGGTA 59.344 37.037 0.00 0.00 0.00 4.02
2365 2591 9.197694 CTATGAATAGGTTTGATTTCTCGGTAG 57.802 37.037 0.00 0.00 0.00 3.18
2366 2592 7.177832 TGAATAGGTTTGATTTCTCGGTAGA 57.822 36.000 0.00 0.00 0.00 2.59
2367 2593 7.792032 TGAATAGGTTTGATTTCTCGGTAGAT 58.208 34.615 0.00 0.00 0.00 1.98
2368 2594 8.265055 TGAATAGGTTTGATTTCTCGGTAGATT 58.735 33.333 0.00 0.00 0.00 2.40
2369 2595 8.664211 AATAGGTTTGATTTCTCGGTAGATTC 57.336 34.615 0.00 0.00 0.00 2.52
2370 2596 5.429130 AGGTTTGATTTCTCGGTAGATTCC 58.571 41.667 0.00 0.00 0.00 3.01
2371 2597 5.189934 AGGTTTGATTTCTCGGTAGATTCCT 59.810 40.000 0.00 0.00 0.00 3.36
2372 2598 6.383147 AGGTTTGATTTCTCGGTAGATTCCTA 59.617 38.462 0.00 0.00 0.00 2.94
2373 2599 7.046033 GGTTTGATTTCTCGGTAGATTCCTAA 58.954 38.462 0.00 0.00 0.00 2.69
2374 2600 7.715686 GGTTTGATTTCTCGGTAGATTCCTAAT 59.284 37.037 0.00 0.00 0.00 1.73
2375 2601 9.760077 GTTTGATTTCTCGGTAGATTCCTAATA 57.240 33.333 0.00 0.00 0.00 0.98
2380 2606 9.640963 ATTTCTCGGTAGATTCCTAATAAATCG 57.359 33.333 0.00 0.00 38.02 3.34
2381 2607 6.618811 TCTCGGTAGATTCCTAATAAATCGC 58.381 40.000 0.00 0.00 38.02 4.58
2382 2608 6.433404 TCTCGGTAGATTCCTAATAAATCGCT 59.567 38.462 0.00 0.00 38.02 4.93
2383 2609 6.989659 TCGGTAGATTCCTAATAAATCGCTT 58.010 36.000 0.00 0.00 38.02 4.68
2384 2610 6.866770 TCGGTAGATTCCTAATAAATCGCTTG 59.133 38.462 0.00 0.00 38.02 4.01
2385 2611 6.645415 CGGTAGATTCCTAATAAATCGCTTGT 59.355 38.462 0.00 0.00 38.02 3.16
2386 2612 7.170998 CGGTAGATTCCTAATAAATCGCTTGTT 59.829 37.037 0.00 0.00 38.02 2.83
2387 2613 9.485206 GGTAGATTCCTAATAAATCGCTTGTTA 57.515 33.333 0.00 0.00 38.02 2.41
2390 2616 9.832445 AGATTCCTAATAAATCGCTTGTTAGAA 57.168 29.630 12.19 7.45 39.75 2.10
2391 2617 9.865484 GATTCCTAATAAATCGCTTGTTAGAAC 57.135 33.333 12.19 0.00 39.75 3.01
2392 2618 8.780846 TTCCTAATAAATCGCTTGTTAGAACA 57.219 30.769 12.19 0.00 39.75 3.18
2393 2619 8.780846 TCCTAATAAATCGCTTGTTAGAACAA 57.219 30.769 7.56 7.56 45.88 2.83
2394 2620 9.391006 TCCTAATAAATCGCTTGTTAGAACAAT 57.609 29.630 8.22 0.00 46.71 2.71
2401 2627 8.687824 AATCGCTTGTTAGAACAATAAATTGG 57.312 30.769 8.22 0.00 46.71 3.16
2402 2628 7.209471 TCGCTTGTTAGAACAATAAATTGGT 57.791 32.000 8.22 0.00 46.71 3.67
2416 2642 9.418045 ACAATAAATTGGTCCAAAAGATAAACG 57.582 29.630 8.75 0.00 41.96 3.60
2417 2643 8.868916 CAATAAATTGGTCCAAAAGATAAACGG 58.131 33.333 8.75 0.00 34.22 4.44
2418 2644 3.926821 TTGGTCCAAAAGATAAACGGC 57.073 42.857 0.40 0.00 0.00 5.68
2419 2645 2.865079 TGGTCCAAAAGATAAACGGCA 58.135 42.857 0.00 0.00 0.00 5.69
2420 2646 3.223435 TGGTCCAAAAGATAAACGGCAA 58.777 40.909 0.00 0.00 0.00 4.52
2421 2647 3.637229 TGGTCCAAAAGATAAACGGCAAA 59.363 39.130 0.00 0.00 0.00 3.68
2422 2648 4.234574 GGTCCAAAAGATAAACGGCAAAG 58.765 43.478 0.00 0.00 0.00 2.77
2423 2649 4.022676 GGTCCAAAAGATAAACGGCAAAGA 60.023 41.667 0.00 0.00 0.00 2.52
2424 2650 5.336451 GGTCCAAAAGATAAACGGCAAAGAT 60.336 40.000 0.00 0.00 0.00 2.40
2425 2651 6.127842 GGTCCAAAAGATAAACGGCAAAGATA 60.128 38.462 0.00 0.00 0.00 1.98
2426 2652 7.309920 GTCCAAAAGATAAACGGCAAAGATAA 58.690 34.615 0.00 0.00 0.00 1.75
2427 2653 7.484959 GTCCAAAAGATAAACGGCAAAGATAAG 59.515 37.037 0.00 0.00 0.00 1.73
2428 2654 7.392113 TCCAAAAGATAAACGGCAAAGATAAGA 59.608 33.333 0.00 0.00 0.00 2.10
2429 2655 7.484959 CCAAAAGATAAACGGCAAAGATAAGAC 59.515 37.037 0.00 0.00 0.00 3.01
2430 2656 7.681939 AAAGATAAACGGCAAAGATAAGACA 57.318 32.000 0.00 0.00 0.00 3.41
2431 2657 7.865706 AAGATAAACGGCAAAGATAAGACAT 57.134 32.000 0.00 0.00 0.00 3.06
2432 2658 8.958119 AAGATAAACGGCAAAGATAAGACATA 57.042 30.769 0.00 0.00 0.00 2.29
2433 2659 8.958119 AGATAAACGGCAAAGATAAGACATAA 57.042 30.769 0.00 0.00 0.00 1.90
2434 2660 9.561069 AGATAAACGGCAAAGATAAGACATAAT 57.439 29.630 0.00 0.00 0.00 1.28
2435 2661 9.813080 GATAAACGGCAAAGATAAGACATAATC 57.187 33.333 0.00 0.00 0.00 1.75
2436 2662 7.865706 AAACGGCAAAGATAAGACATAATCT 57.134 32.000 0.00 0.00 40.46 2.40
2449 2675 6.287589 AGACATAATCTTATCGGTCATCCC 57.712 41.667 0.00 0.00 31.62 3.85
2450 2676 5.187967 AGACATAATCTTATCGGTCATCCCC 59.812 44.000 0.00 0.00 31.62 4.81
2451 2677 5.094387 ACATAATCTTATCGGTCATCCCCT 58.906 41.667 0.00 0.00 0.00 4.79
2452 2678 5.046304 ACATAATCTTATCGGTCATCCCCTG 60.046 44.000 0.00 0.00 0.00 4.45
2453 2679 2.767644 TCTTATCGGTCATCCCCTGA 57.232 50.000 0.00 0.00 0.00 3.86
2454 2680 3.260269 TCTTATCGGTCATCCCCTGAT 57.740 47.619 0.00 0.00 35.97 2.90
2455 2681 3.587498 TCTTATCGGTCATCCCCTGATT 58.413 45.455 0.00 0.00 35.97 2.57
2456 2682 4.747583 TCTTATCGGTCATCCCCTGATTA 58.252 43.478 0.00 0.00 35.97 1.75
2457 2683 4.772624 TCTTATCGGTCATCCCCTGATTAG 59.227 45.833 0.00 0.00 35.97 1.73
2458 2684 2.767644 TCGGTCATCCCCTGATTAGA 57.232 50.000 0.00 0.00 35.97 2.10
2459 2685 2.598565 TCGGTCATCCCCTGATTAGAG 58.401 52.381 0.00 0.00 35.97 2.43
2460 2686 2.177016 TCGGTCATCCCCTGATTAGAGA 59.823 50.000 0.00 0.00 35.97 3.10
2461 2687 3.169099 CGGTCATCCCCTGATTAGAGAT 58.831 50.000 0.00 0.00 35.97 2.75
2462 2688 4.044191 TCGGTCATCCCCTGATTAGAGATA 59.956 45.833 0.00 0.00 35.97 1.98
2463 2689 4.772624 CGGTCATCCCCTGATTAGAGATAA 59.227 45.833 0.00 0.00 35.97 1.75
2464 2690 5.246203 CGGTCATCCCCTGATTAGAGATAAA 59.754 44.000 0.00 0.00 35.97 1.40
2465 2691 6.070538 CGGTCATCCCCTGATTAGAGATAAAT 60.071 42.308 0.00 0.00 35.97 1.40
2466 2692 7.527868 CGGTCATCCCCTGATTAGAGATAAATT 60.528 40.741 0.00 0.00 35.97 1.82
2467 2693 7.609532 GGTCATCCCCTGATTAGAGATAAATTG 59.390 40.741 0.00 0.00 35.97 2.32
2468 2694 7.609532 GTCATCCCCTGATTAGAGATAAATTGG 59.390 40.741 0.00 0.00 35.97 3.16
2469 2695 7.517254 TCATCCCCTGATTAGAGATAAATTGGA 59.483 37.037 0.00 0.00 0.00 3.53
2470 2696 7.705912 TCCCCTGATTAGAGATAAATTGGAA 57.294 36.000 0.00 0.00 0.00 3.53
2471 2697 7.749666 TCCCCTGATTAGAGATAAATTGGAAG 58.250 38.462 0.00 0.00 0.00 3.46
2472 2698 7.572485 TCCCCTGATTAGAGATAAATTGGAAGA 59.428 37.037 0.00 0.00 0.00 2.87
2473 2699 8.389366 CCCCTGATTAGAGATAAATTGGAAGAT 58.611 37.037 0.00 0.00 0.00 2.40
2474 2700 9.804977 CCCTGATTAGAGATAAATTGGAAGATT 57.195 33.333 0.00 0.00 0.00 2.40
2482 2708 9.277783 AGAGATAAATTGGAAGATTAATCGGTG 57.722 33.333 9.78 0.00 0.00 4.94
2483 2709 9.273016 GAGATAAATTGGAAGATTAATCGGTGA 57.727 33.333 9.78 0.00 0.00 4.02
2484 2710 9.627123 AGATAAATTGGAAGATTAATCGGTGAA 57.373 29.630 9.78 3.21 0.00 3.18
2487 2713 5.984233 TTGGAAGATTAATCGGTGAATCG 57.016 39.130 9.78 0.00 37.19 3.34
2488 2714 4.377021 TGGAAGATTAATCGGTGAATCGG 58.623 43.478 9.78 0.00 37.19 4.18
2489 2715 4.100344 TGGAAGATTAATCGGTGAATCGGA 59.900 41.667 9.78 0.00 37.19 4.55
2490 2716 5.054477 GGAAGATTAATCGGTGAATCGGAA 58.946 41.667 9.78 0.00 37.19 4.30
2491 2717 5.177696 GGAAGATTAATCGGTGAATCGGAAG 59.822 44.000 9.78 0.00 37.19 3.46
2611 2844 3.201266 TGGTACTTTGTGGTTGTTCTCCT 59.799 43.478 0.00 0.00 0.00 3.69
2623 2856 7.103641 GTGGTTGTTCTCCTTGATAACTCATA 58.896 38.462 0.00 0.00 0.00 2.15
2985 3456 5.121105 TCATCGACTAGACACGGATCTTAA 58.879 41.667 0.00 0.00 0.00 1.85
3040 3511 2.341101 CCCTCCTGCACGTCGTACT 61.341 63.158 0.00 0.00 0.00 2.73
3048 3519 1.855978 TGCACGTCGTACTTGTCAAAG 59.144 47.619 0.00 0.00 39.49 2.77
3064 3535 1.682854 CAAAGAGACAGCCTTGGCAAA 59.317 47.619 14.54 0.00 33.45 3.68
3073 3544 6.809869 AGACAGCCTTGGCAAAAATATTATC 58.190 36.000 14.54 0.00 33.45 1.75
3115 3586 3.909430 TGAGACACAGGATAACGACAAC 58.091 45.455 0.00 0.00 0.00 3.32
3126 3597 0.317603 AACGACAACGACGACTCTGG 60.318 55.000 0.00 0.00 42.66 3.86
3200 3702 1.302511 GGTTCTTCTTCCCGCAGCA 60.303 57.895 0.00 0.00 0.00 4.41
3247 3842 1.423845 GGTAGCAAATGTGGACGCG 59.576 57.895 3.53 3.53 0.00 6.01
3275 3871 6.504398 CACTCAGATGATGCAAATGCTAAAT 58.496 36.000 6.97 0.00 42.66 1.40
3286 3882 4.802039 GCAAATGCTAAATCACATGACAGG 59.198 41.667 0.00 0.00 38.21 4.00
3291 3887 4.130118 GCTAAATCACATGACAGGGTAGG 58.870 47.826 0.00 0.00 0.00 3.18
3297 3893 2.774234 CACATGACAGGGTAGGAGGAAT 59.226 50.000 0.00 0.00 0.00 3.01
3350 3946 4.104086 TGAACCTATGATTGAGTCCCAGT 58.896 43.478 0.00 0.00 0.00 4.00
3357 3953 2.040145 TGATTGAGTCCCAGTTCATGCA 59.960 45.455 0.00 0.00 0.00 3.96
3358 3954 2.189594 TTGAGTCCCAGTTCATGCAG 57.810 50.000 0.00 0.00 0.00 4.41
3377 3973 3.366070 GCAGACTGCTACTTCTAACACGA 60.366 47.826 20.41 0.00 40.96 4.35
3441 4037 2.543848 TGACAGACACGCAGTTTGATTC 59.456 45.455 6.20 0.00 41.61 2.52
3451 4047 2.086869 CAGTTTGATTCGGCCACTGAT 58.913 47.619 10.80 0.00 37.63 2.90
3458 4054 3.450817 TGATTCGGCCACTGATTCTTCTA 59.549 43.478 2.24 0.00 0.00 2.10
3461 4057 2.103094 TCGGCCACTGATTCTTCTATGG 59.897 50.000 2.24 0.00 33.24 2.74
3484 4080 1.303398 ATGCAGTGCTCAGCTTGCT 60.303 52.632 21.98 5.85 39.31 3.91
3492 4088 4.033817 CAGTGCTCAGCTTGCTAATACTTC 59.966 45.833 0.00 0.00 0.00 3.01
3500 4096 6.697455 TCAGCTTGCTAATACTTCGTCTTATG 59.303 38.462 0.00 0.00 0.00 1.90
3507 4103 6.918569 GCTAATACTTCGTCTTATGAGCAGAA 59.081 38.462 0.00 0.00 33.70 3.02
3526 4122 1.061570 GCGCGAGAATTTGAGGCTG 59.938 57.895 12.10 0.00 0.00 4.85
3558 4154 4.020617 TCCAGCTTCGCCACCCAG 62.021 66.667 0.00 0.00 0.00 4.45
3624 4220 3.254629 TGGTCATCCAAGAGCTTGC 57.745 52.632 4.72 0.00 41.25 4.01
3702 4298 1.843368 CAGGTTCCATGCAGGTGAAT 58.157 50.000 0.00 0.00 39.02 2.57
3790 4392 9.562583 TGTTTTGTTACTGTATTTTTGACACTC 57.437 29.630 0.00 0.00 0.00 3.51
3956 4579 1.748493 GTCACCCAGCAAACAAGTTGA 59.252 47.619 10.54 0.00 39.87 3.18
3996 4621 5.893500 TCTAGTATCCCAGGATCAAGGTAG 58.106 45.833 1.49 0.00 36.17 3.18
4005 4630 4.938226 CCAGGATCAAGGTAGTCTGTTTTC 59.062 45.833 0.00 0.00 0.00 2.29
4411 5069 4.132122 TGAGGCATCATCTACTATCCCA 57.868 45.455 0.00 0.00 0.00 4.37
4429 5087 2.158460 CCCAAGATCAAGGTAATCCCCC 60.158 54.545 0.00 0.00 0.00 5.40
4436 5094 4.042271 TCAAGGTAATCCCCCTTTTGTC 57.958 45.455 0.00 0.00 40.35 3.18
4497 5155 9.187996 TGTTGCATAATAGATGAATTTCCAAGA 57.812 29.630 0.00 0.00 0.00 3.02
4544 5207 8.918961 AATGCTACTTCTATAATTAGCTAGCG 57.081 34.615 9.55 0.00 41.83 4.26
4626 5289 9.169468 CGTGGTCATTTTTGTTAATATATGCTC 57.831 33.333 0.00 0.00 0.00 4.26
4880 5682 4.097286 GTCTTCTCCTCGACTAAGAGCAAT 59.903 45.833 0.00 0.00 36.95 3.56
4917 5719 4.550076 AGAGGTTGTGGATCTTGAAGAG 57.450 45.455 0.00 0.00 0.00 2.85
4927 5730 1.004560 CTTGAAGAGCAGGCCACGA 60.005 57.895 5.01 0.00 0.00 4.35
4940 5743 2.710902 CCACGATGACGCCTCCTGA 61.711 63.158 0.00 0.00 43.96 3.86
5065 5868 2.042831 GCAGTGGCCACCATCACTC 61.043 63.158 32.29 4.74 41.71 3.51
5180 5984 9.809096 ATCACTACTCTGATGTTAAACATACAG 57.191 33.333 0.00 0.00 39.27 2.74
5196 6000 6.374417 ACATACAGACCTAGTTTGTGGATT 57.626 37.500 1.50 0.00 33.09 3.01
5197 6001 6.779860 ACATACAGACCTAGTTTGTGGATTT 58.220 36.000 1.50 0.00 33.09 2.17
5381 6187 4.202202 ACAGCTCTAGGTAATCATGCACTC 60.202 45.833 0.00 0.00 0.00 3.51
5509 6317 9.445973 AAGATCTCTTCTTATTCCCTGATAACT 57.554 33.333 0.00 0.00 43.03 2.24
5547 6355 5.471116 TCTCATGCCACAATATGTTCTATGC 59.529 40.000 0.00 0.00 0.00 3.14
5580 6388 4.771590 AACCAGTATGTTGCATGACAAG 57.228 40.909 0.00 0.00 39.50 3.16
5650 6460 2.565834 GGCCTGAACTAGTGTTGTCCTA 59.434 50.000 0.00 0.00 36.39 2.94
5651 6461 3.586892 GCCTGAACTAGTGTTGTCCTAC 58.413 50.000 0.00 0.00 36.39 3.18
5657 6467 7.392673 CCTGAACTAGTGTTGTCCTACTAAGTA 59.607 40.741 0.00 0.00 36.39 2.24
5685 6495 5.626142 TGTTTGGCCTGATAACTTTGACTA 58.374 37.500 3.32 0.00 0.00 2.59
5727 6537 4.102524 TCCAATACAGTCTTCACAACACCT 59.897 41.667 0.00 0.00 0.00 4.00
5735 6545 5.119279 CAGTCTTCACAACACCTCTTTATCG 59.881 44.000 0.00 0.00 0.00 2.92
5751 6561 7.967854 CCTCTTTATCGCAACATTCATTGTTTA 59.032 33.333 0.00 0.00 46.51 2.01
5757 6567 5.030295 CGCAACATTCATTGTTTAGCCTAG 58.970 41.667 0.00 0.00 46.51 3.02
5760 6570 6.967199 GCAACATTCATTGTTTAGCCTAGTAC 59.033 38.462 0.00 0.00 46.51 2.73
5774 6584 4.915194 AGCCTAGTACCTACCACTCTATCT 59.085 45.833 0.00 0.00 0.00 1.98
5776 6586 5.481105 CCTAGTACCTACCACTCTATCTCG 58.519 50.000 0.00 0.00 0.00 4.04
5780 6590 3.543665 ACCTACCACTCTATCTCGACAC 58.456 50.000 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 4.976224 AACACAACTGTAACTTTGACCC 57.024 40.909 0.00 0.00 0.00 4.46
9 10 5.705902 ACAAACACAACTGTAACTTTGACC 58.294 37.500 11.13 0.00 0.00 4.02
29 30 4.437794 CGTAGACCTGATTACTGCGTACAA 60.438 45.833 0.00 0.00 35.69 2.41
62 64 6.903883 ACTTTCGTGTAAATAGCATGGTAG 57.096 37.500 10.82 0.00 0.00 3.18
79 81 5.941948 AAAACATCTCCCAGTAACTTTCG 57.058 39.130 0.00 0.00 0.00 3.46
108 110 8.671921 CATACTGCTTCACATAGATCAAAAAGT 58.328 33.333 0.00 0.00 0.00 2.66
129 131 6.751514 TCATTTTATTGCACGTTCCATACT 57.248 33.333 0.00 0.00 0.00 2.12
138 140 5.289193 CCAAGTTCCATCATTTTATTGCACG 59.711 40.000 0.00 0.00 0.00 5.34
145 147 5.479724 TGTGCATCCAAGTTCCATCATTTTA 59.520 36.000 0.00 0.00 0.00 1.52
265 267 5.596772 ACAACAACCAACTAGGCTAATTTGT 59.403 36.000 12.28 1.56 43.14 2.83
288 290 5.639506 CGACCTCATATGTTAATCCCATGAC 59.360 44.000 1.90 0.00 0.00 3.06
291 293 5.513094 CCACGACCTCATATGTTAATCCCAT 60.513 44.000 1.90 0.00 0.00 4.00
400 402 6.029607 CGTGGAATTGATGACACTTTAATGG 58.970 40.000 0.00 0.00 0.00 3.16
436 438 5.408299 TCTGTGGTCGTGATTAATGACTTTG 59.592 40.000 3.52 0.00 43.35 2.77
451 453 3.731867 GCATGCCTAATTTTCTGTGGTCG 60.732 47.826 6.36 0.00 0.00 4.79
456 458 3.947196 TGATCGCATGCCTAATTTTCTGT 59.053 39.130 13.15 0.00 0.00 3.41
473 475 8.275632 TGATAGCGATTAATGACTTTTTGATCG 58.724 33.333 0.00 6.31 38.25 3.69
492 494 7.946655 TTGTGATCTACCTTTAATGATAGCG 57.053 36.000 0.00 0.00 0.00 4.26
508 510 3.119029 CGGGCATTTGGATTTTGTGATCT 60.119 43.478 0.00 0.00 0.00 2.75
521 614 5.009854 ACAATCTAATTTCCGGGCATTTG 57.990 39.130 0.00 1.60 0.00 2.32
522 615 4.709397 TGACAATCTAATTTCCGGGCATTT 59.291 37.500 0.00 0.00 0.00 2.32
528 621 7.843490 TCTTAGTTGACAATCTAATTTCCGG 57.157 36.000 0.00 0.00 0.00 5.14
565 658 8.134202 TGAGACTGGTAATCAGAACTTATCAA 57.866 34.615 0.00 0.00 46.18 2.57
605 698 4.767928 ACCAACAACTCAACAAAACCACTA 59.232 37.500 0.00 0.00 0.00 2.74
630 728 6.033341 CGAAAGGTGAATTGAAAGACACAAA 58.967 36.000 0.00 0.00 35.33 2.83
812 917 8.203485 AGACAAATCTTTACAGGCAATCAAAAA 58.797 29.630 0.00 0.00 0.00 1.94
847 953 8.712285 AGTCCATTTCATTGATAGCATTTTTG 57.288 30.769 0.00 0.00 0.00 2.44
900 1007 3.655777 ACTAAGGAAACTGAATGGGTGGA 59.344 43.478 0.00 0.00 42.68 4.02
1091 1219 2.165641 TCTGTCATCTTCGGCGTATGTT 59.834 45.455 6.85 0.00 0.00 2.71
1140 1271 6.429692 TCCGCTTGAACTTCTCATCAAAATTA 59.570 34.615 0.00 0.00 35.31 1.40
1173 1304 0.248743 CAGTATTGCCGGCAAGCATG 60.249 55.000 41.38 32.90 43.64 4.06
1211 1342 5.091552 ACCACCTAGGACTAATCTTGTTGA 58.908 41.667 17.98 0.00 41.22 3.18
1261 1392 8.110860 AGTTACCACCATACAAAATGAGAAAG 57.889 34.615 0.00 0.00 0.00 2.62
1264 1395 9.747898 ATAAAGTTACCACCATACAAAATGAGA 57.252 29.630 0.00 0.00 0.00 3.27
1265 1396 9.787532 CATAAAGTTACCACCATACAAAATGAG 57.212 33.333 0.00 0.00 0.00 2.90
1266 1397 9.303116 ACATAAAGTTACCACCATACAAAATGA 57.697 29.630 0.00 0.00 0.00 2.57
1271 1404 7.940137 ACAAGACATAAAGTTACCACCATACAA 59.060 33.333 0.00 0.00 0.00 2.41
1273 1406 7.148306 CCACAAGACATAAAGTTACCACCATAC 60.148 40.741 0.00 0.00 0.00 2.39
1278 1411 4.760204 AGCCACAAGACATAAAGTTACCAC 59.240 41.667 0.00 0.00 0.00 4.16
1527 1692 8.802856 CGTCAGAATACACAATCAAAACAAAAA 58.197 29.630 0.00 0.00 0.00 1.94
1614 1798 3.451004 GCACCATCGGGCAATGCA 61.451 61.111 7.79 0.00 34.66 3.96
1777 1971 7.174253 ACGCAAATGAGTAAGGAAAAGTATGAA 59.826 33.333 0.00 0.00 0.00 2.57
1837 2032 3.795150 GCCAAACAAGCAGAAATCAACGA 60.795 43.478 0.00 0.00 0.00 3.85
1944 2151 9.127277 GCTACAATTACCATAATACCTCCAAAA 57.873 33.333 0.00 0.00 0.00 2.44
1957 2164 7.539034 AAACAAAAGGAGCTACAATTACCAT 57.461 32.000 0.00 0.00 0.00 3.55
2012 2238 6.373216 TGCAAAATAGTTATGAGGGTGTACAC 59.627 38.462 18.01 18.01 0.00 2.90
2028 2254 6.580041 GCGATATCCTCAACATTGCAAAATAG 59.420 38.462 1.71 0.00 0.00 1.73
2029 2255 6.262944 AGCGATATCCTCAACATTGCAAAATA 59.737 34.615 1.71 0.00 32.44 1.40
2030 2256 5.068198 AGCGATATCCTCAACATTGCAAAAT 59.932 36.000 1.71 0.00 32.44 1.82
2031 2257 4.398988 AGCGATATCCTCAACATTGCAAAA 59.601 37.500 1.71 0.00 32.44 2.44
2032 2258 3.947196 AGCGATATCCTCAACATTGCAAA 59.053 39.130 1.71 0.00 32.44 3.68
2033 2259 3.544684 AGCGATATCCTCAACATTGCAA 58.455 40.909 0.00 0.00 32.44 4.08
2034 2260 3.198409 AGCGATATCCTCAACATTGCA 57.802 42.857 0.00 0.00 32.44 4.08
2035 2261 5.445142 CGATAAGCGATATCCTCAACATTGC 60.445 44.000 0.00 0.00 44.57 3.56
2036 2262 5.635280 ACGATAAGCGATATCCTCAACATTG 59.365 40.000 0.00 0.00 44.57 2.82
2037 2263 5.784177 ACGATAAGCGATATCCTCAACATT 58.216 37.500 0.00 0.00 44.57 2.71
2038 2264 5.392767 ACGATAAGCGATATCCTCAACAT 57.607 39.130 0.00 0.00 44.57 2.71
2039 2265 4.848562 ACGATAAGCGATATCCTCAACA 57.151 40.909 0.00 0.00 44.57 3.33
2040 2266 6.194876 CGATAACGATAAGCGATATCCTCAAC 59.805 42.308 9.39 0.00 46.09 3.18
2041 2267 6.128090 ACGATAACGATAAGCGATATCCTCAA 60.128 38.462 0.00 0.00 46.09 3.02
2042 2268 5.353400 ACGATAACGATAAGCGATATCCTCA 59.647 40.000 0.00 0.00 46.09 3.86
2043 2269 5.808403 ACGATAACGATAAGCGATATCCTC 58.192 41.667 0.00 0.00 46.09 3.71
2044 2270 5.585445 AGACGATAACGATAAGCGATATCCT 59.415 40.000 0.00 0.00 46.09 3.24
2045 2271 5.808403 AGACGATAACGATAAGCGATATCC 58.192 41.667 0.00 0.00 46.09 2.59
2046 2272 5.612390 CGAGACGATAACGATAAGCGATATC 59.388 44.000 0.00 6.07 45.66 1.63
2047 2273 5.491092 CGAGACGATAACGATAAGCGATAT 58.509 41.667 0.00 0.00 44.57 1.63
2048 2274 4.201656 CCGAGACGATAACGATAAGCGATA 60.202 45.833 0.00 0.00 44.57 2.92
2049 2275 3.424565 CCGAGACGATAACGATAAGCGAT 60.425 47.826 0.00 0.00 44.57 4.58
2050 2276 2.096565 CCGAGACGATAACGATAAGCGA 60.097 50.000 0.00 0.00 44.57 4.93
2052 2278 3.224750 GACCGAGACGATAACGATAAGC 58.775 50.000 0.00 0.00 42.66 3.09
2053 2279 4.456019 CTGACCGAGACGATAACGATAAG 58.544 47.826 0.00 0.00 42.66 1.73
2054 2280 3.303593 GCTGACCGAGACGATAACGATAA 60.304 47.826 0.00 0.00 42.66 1.75
2055 2281 2.222678 GCTGACCGAGACGATAACGATA 59.777 50.000 0.00 0.00 42.66 2.92
2056 2282 1.002684 GCTGACCGAGACGATAACGAT 60.003 52.381 0.00 0.00 42.66 3.73
2057 2283 0.376152 GCTGACCGAGACGATAACGA 59.624 55.000 0.00 0.00 42.66 3.85
2058 2284 0.377554 AGCTGACCGAGACGATAACG 59.622 55.000 0.00 0.00 45.75 3.18
2059 2285 2.031857 CCTAGCTGACCGAGACGATAAC 60.032 54.545 0.00 0.00 0.00 1.89
2060 2286 2.219458 CCTAGCTGACCGAGACGATAA 58.781 52.381 0.00 0.00 0.00 1.75
2061 2287 1.542767 CCCTAGCTGACCGAGACGATA 60.543 57.143 0.00 0.00 0.00 2.92
2062 2288 0.820074 CCCTAGCTGACCGAGACGAT 60.820 60.000 0.00 0.00 0.00 3.73
2063 2289 1.451567 CCCTAGCTGACCGAGACGA 60.452 63.158 0.00 0.00 0.00 4.20
2064 2290 0.820074 ATCCCTAGCTGACCGAGACG 60.820 60.000 0.00 0.00 0.00 4.18
2065 2291 1.404843 AATCCCTAGCTGACCGAGAC 58.595 55.000 0.00 0.00 0.00 3.36
2066 2292 2.442126 TCTAATCCCTAGCTGACCGAGA 59.558 50.000 0.00 0.00 0.00 4.04
2067 2293 2.817258 CTCTAATCCCTAGCTGACCGAG 59.183 54.545 0.00 0.00 0.00 4.63
2068 2294 2.442126 TCTCTAATCCCTAGCTGACCGA 59.558 50.000 0.00 0.00 0.00 4.69
2069 2295 2.865079 TCTCTAATCCCTAGCTGACCG 58.135 52.381 0.00 0.00 0.00 4.79
2070 2296 6.919775 TTAATCTCTAATCCCTAGCTGACC 57.080 41.667 0.00 0.00 0.00 4.02
2071 2297 7.254852 CGATTAATCTCTAATCCCTAGCTGAC 58.745 42.308 13.45 0.00 31.96 3.51
2072 2298 6.378564 CCGATTAATCTCTAATCCCTAGCTGA 59.621 42.308 13.45 0.00 31.96 4.26
2073 2299 6.378564 TCCGATTAATCTCTAATCCCTAGCTG 59.621 42.308 13.45 0.00 31.96 4.24
2074 2300 6.494952 TCCGATTAATCTCTAATCCCTAGCT 58.505 40.000 13.45 0.00 31.96 3.32
2075 2301 6.777213 TCCGATTAATCTCTAATCCCTAGC 57.223 41.667 13.45 0.00 31.96 3.42
2076 2302 9.810545 GATTTCCGATTAATCTCTAATCCCTAG 57.189 37.037 13.45 0.00 31.96 3.02
2077 2303 8.467598 CGATTTCCGATTAATCTCTAATCCCTA 58.532 37.037 13.45 0.00 41.76 3.53
2078 2304 7.324178 CGATTTCCGATTAATCTCTAATCCCT 58.676 38.462 13.45 0.00 41.76 4.20
2079 2305 6.535508 CCGATTTCCGATTAATCTCTAATCCC 59.464 42.308 13.45 0.14 41.76 3.85
2080 2306 6.036191 GCCGATTTCCGATTAATCTCTAATCC 59.964 42.308 13.45 4.66 41.76 3.01
2081 2307 6.036191 GGCCGATTTCCGATTAATCTCTAATC 59.964 42.308 13.45 14.97 41.76 1.75
2082 2308 5.875359 GGCCGATTTCCGATTAATCTCTAAT 59.125 40.000 13.45 9.06 41.76 1.73
2083 2309 5.235516 GGCCGATTTCCGATTAATCTCTAA 58.764 41.667 13.45 4.99 41.76 2.10
2084 2310 4.817517 GGCCGATTTCCGATTAATCTCTA 58.182 43.478 13.45 0.00 41.76 2.43
2085 2311 3.665190 GGCCGATTTCCGATTAATCTCT 58.335 45.455 13.45 0.00 41.76 3.10
2095 2321 7.993681 TAAAATTGATTTATCGGCCGATTTCCG 60.994 37.037 42.74 8.09 39.12 4.30
2096 2322 4.766404 ATTGATTTATCGGCCGATTTCC 57.234 40.909 42.74 27.84 36.17 3.13
2097 2323 8.742554 ATAAAATTGATTTATCGGCCGATTTC 57.257 30.769 42.74 32.82 39.49 2.17
2098 2324 8.742554 GATAAAATTGATTTATCGGCCGATTT 57.257 30.769 42.74 29.05 45.91 2.17
2113 2339 8.908678 CGATTAATAGTCGACCGATAAAATTGA 58.091 33.333 13.01 0.00 41.40 2.57
2114 2340 8.160342 CCGATTAATAGTCGACCGATAAAATTG 58.840 37.037 13.01 12.13 41.40 2.32
2115 2341 8.084073 TCCGATTAATAGTCGACCGATAAAATT 58.916 33.333 13.01 3.99 41.40 1.82
2116 2342 7.596494 TCCGATTAATAGTCGACCGATAAAAT 58.404 34.615 13.01 9.49 41.40 1.82
2117 2343 6.969366 TCCGATTAATAGTCGACCGATAAAA 58.031 36.000 13.01 5.28 41.40 1.52
2118 2344 6.558771 TCCGATTAATAGTCGACCGATAAA 57.441 37.500 13.01 1.09 41.40 1.40
2119 2345 6.748333 ATCCGATTAATAGTCGACCGATAA 57.252 37.500 13.01 9.27 41.40 1.75
2120 2346 8.442632 AATATCCGATTAATAGTCGACCGATA 57.557 34.615 13.01 6.06 41.40 2.92
2121 2347 6.939132 ATATCCGATTAATAGTCGACCGAT 57.061 37.500 13.01 3.03 41.40 4.18
2122 2348 6.748333 AATATCCGATTAATAGTCGACCGA 57.252 37.500 13.01 0.16 41.40 4.69
2123 2349 7.807687 AAAATATCCGATTAATAGTCGACCG 57.192 36.000 13.01 6.54 41.40 4.79
2145 2371 6.183360 TGTCGGGAACATGAGATTTTCAAAAA 60.183 34.615 0.00 0.00 39.77 1.94
2146 2372 5.300539 TGTCGGGAACATGAGATTTTCAAAA 59.699 36.000 0.00 0.00 39.77 2.44
2147 2373 4.824537 TGTCGGGAACATGAGATTTTCAAA 59.175 37.500 0.00 0.00 39.77 2.69
2148 2374 4.215399 GTGTCGGGAACATGAGATTTTCAA 59.785 41.667 0.00 0.00 40.80 2.69
2149 2375 3.751175 GTGTCGGGAACATGAGATTTTCA 59.249 43.478 0.00 0.00 40.80 2.69
2150 2376 4.003648 AGTGTCGGGAACATGAGATTTTC 58.996 43.478 0.00 0.00 40.80 2.29
2151 2377 4.021102 AGTGTCGGGAACATGAGATTTT 57.979 40.909 0.00 0.00 40.80 1.82
2152 2378 3.703001 AGTGTCGGGAACATGAGATTT 57.297 42.857 0.00 0.00 40.80 2.17
2153 2379 4.819105 TTAGTGTCGGGAACATGAGATT 57.181 40.909 0.00 0.00 40.80 2.40
2154 2380 4.819105 TTTAGTGTCGGGAACATGAGAT 57.181 40.909 0.00 0.00 40.80 2.75
2155 2381 4.610605 TTTTAGTGTCGGGAACATGAGA 57.389 40.909 0.00 0.00 40.80 3.27
2156 2382 5.872617 TGTATTTTAGTGTCGGGAACATGAG 59.127 40.000 0.00 0.00 40.80 2.90
2157 2383 5.640357 GTGTATTTTAGTGTCGGGAACATGA 59.360 40.000 0.00 0.00 40.80 3.07
2158 2384 5.642063 AGTGTATTTTAGTGTCGGGAACATG 59.358 40.000 0.00 0.00 40.80 3.21
2159 2385 5.801380 AGTGTATTTTAGTGTCGGGAACAT 58.199 37.500 0.00 0.00 40.80 2.71
2160 2386 5.217978 AGTGTATTTTAGTGTCGGGAACA 57.782 39.130 0.00 0.00 34.78 3.18
2161 2387 9.538508 AATATAGTGTATTTTAGTGTCGGGAAC 57.461 33.333 0.00 0.00 0.00 3.62
2162 2388 9.754382 GAATATAGTGTATTTTAGTGTCGGGAA 57.246 33.333 0.00 0.00 0.00 3.97
2163 2389 8.916062 TGAATATAGTGTATTTTAGTGTCGGGA 58.084 33.333 0.00 0.00 0.00 5.14
2164 2390 9.537192 TTGAATATAGTGTATTTTAGTGTCGGG 57.463 33.333 0.00 0.00 0.00 5.14
2185 2411 8.954950 TGTCAAATATTGTTTTGGTGTTGAAT 57.045 26.923 0.00 0.00 37.23 2.57
2186 2412 8.253810 TCTGTCAAATATTGTTTTGGTGTTGAA 58.746 29.630 0.00 0.00 37.23 2.69
2187 2413 7.776107 TCTGTCAAATATTGTTTTGGTGTTGA 58.224 30.769 0.00 0.00 37.23 3.18
2188 2414 8.417780 TTCTGTCAAATATTGTTTTGGTGTTG 57.582 30.769 0.00 0.00 37.23 3.33
2189 2415 8.257306 ACTTCTGTCAAATATTGTTTTGGTGTT 58.743 29.630 0.00 0.00 37.23 3.32
2190 2416 7.706179 CACTTCTGTCAAATATTGTTTTGGTGT 59.294 33.333 0.00 0.00 37.23 4.16
2191 2417 7.706179 ACACTTCTGTCAAATATTGTTTTGGTG 59.294 33.333 0.00 0.00 37.23 4.17
2192 2418 7.781056 ACACTTCTGTCAAATATTGTTTTGGT 58.219 30.769 0.00 0.00 37.23 3.67
2193 2419 8.647143 AACACTTCTGTCAAATATTGTTTTGG 57.353 30.769 0.00 0.00 37.23 3.28
2195 2421 9.744468 GGTAACACTTCTGTCAAATATTGTTTT 57.256 29.630 0.00 0.00 0.00 2.43
2196 2422 9.131791 AGGTAACACTTCTGTCAAATATTGTTT 57.868 29.630 0.00 0.00 41.41 2.83
2197 2423 8.691661 AGGTAACACTTCTGTCAAATATTGTT 57.308 30.769 0.00 0.00 41.41 2.83
2198 2424 8.567948 CAAGGTAACACTTCTGTCAAATATTGT 58.432 33.333 0.00 0.00 41.41 2.71
2199 2425 8.783093 TCAAGGTAACACTTCTGTCAAATATTG 58.217 33.333 0.00 0.00 41.41 1.90
2200 2426 8.918202 TCAAGGTAACACTTCTGTCAAATATT 57.082 30.769 0.00 0.00 41.41 1.28
2201 2427 9.520515 AATCAAGGTAACACTTCTGTCAAATAT 57.479 29.630 0.00 0.00 41.41 1.28
2202 2428 8.918202 AATCAAGGTAACACTTCTGTCAAATA 57.082 30.769 0.00 0.00 41.41 1.40
2203 2429 7.823745 AATCAAGGTAACACTTCTGTCAAAT 57.176 32.000 0.00 0.00 41.41 2.32
2204 2430 7.556275 AGAAATCAAGGTAACACTTCTGTCAAA 59.444 33.333 0.00 0.00 41.41 2.69
2205 2431 7.054124 AGAAATCAAGGTAACACTTCTGTCAA 58.946 34.615 0.00 0.00 41.41 3.18
2206 2432 6.591935 AGAAATCAAGGTAACACTTCTGTCA 58.408 36.000 0.00 0.00 41.41 3.58
2207 2433 7.148557 GCTAGAAATCAAGGTAACACTTCTGTC 60.149 40.741 0.00 0.00 41.41 3.51
2208 2434 6.651225 GCTAGAAATCAAGGTAACACTTCTGT 59.349 38.462 0.00 0.00 41.41 3.41
2209 2435 6.092807 GGCTAGAAATCAAGGTAACACTTCTG 59.907 42.308 0.00 0.00 41.41 3.02
2210 2436 6.013293 AGGCTAGAAATCAAGGTAACACTTCT 60.013 38.462 0.00 0.00 41.41 2.85
2211 2437 6.174049 AGGCTAGAAATCAAGGTAACACTTC 58.826 40.000 0.00 0.00 41.41 3.01
2212 2438 6.128138 AGGCTAGAAATCAAGGTAACACTT 57.872 37.500 0.00 0.00 41.41 3.16
2213 2439 5.763876 AGGCTAGAAATCAAGGTAACACT 57.236 39.130 0.00 0.00 41.41 3.55
2214 2440 6.430000 TCAAAGGCTAGAAATCAAGGTAACAC 59.570 38.462 0.00 0.00 41.41 3.32
2215 2441 6.539173 TCAAAGGCTAGAAATCAAGGTAACA 58.461 36.000 0.00 0.00 41.41 2.41
2216 2442 7.448748 TTCAAAGGCTAGAAATCAAGGTAAC 57.551 36.000 0.00 0.00 0.00 2.50
2217 2443 7.339466 GGATTCAAAGGCTAGAAATCAAGGTAA 59.661 37.037 14.03 0.00 0.00 2.85
2218 2444 6.828785 GGATTCAAAGGCTAGAAATCAAGGTA 59.171 38.462 14.03 0.00 0.00 3.08
2219 2445 5.654209 GGATTCAAAGGCTAGAAATCAAGGT 59.346 40.000 14.03 0.00 0.00 3.50
2220 2446 5.890419 AGGATTCAAAGGCTAGAAATCAAGG 59.110 40.000 14.03 0.00 0.00 3.61
2221 2447 6.238320 CGAGGATTCAAAGGCTAGAAATCAAG 60.238 42.308 14.03 4.92 0.00 3.02
2222 2448 5.586243 CGAGGATTCAAAGGCTAGAAATCAA 59.414 40.000 14.03 0.00 0.00 2.57
2223 2449 5.118990 CGAGGATTCAAAGGCTAGAAATCA 58.881 41.667 14.03 0.00 0.00 2.57
2224 2450 5.119694 ACGAGGATTCAAAGGCTAGAAATC 58.880 41.667 6.43 6.73 0.00 2.17
2225 2451 5.104259 ACGAGGATTCAAAGGCTAGAAAT 57.896 39.130 6.43 0.00 0.00 2.17
2226 2452 4.553330 ACGAGGATTCAAAGGCTAGAAA 57.447 40.909 6.43 0.00 0.00 2.52
2227 2453 5.871396 ATACGAGGATTCAAAGGCTAGAA 57.129 39.130 0.00 4.99 0.00 2.10
2228 2454 6.971726 TTATACGAGGATTCAAAGGCTAGA 57.028 37.500 0.00 0.00 0.00 2.43
2229 2455 6.591834 CCATTATACGAGGATTCAAAGGCTAG 59.408 42.308 0.00 0.00 0.00 3.42
2230 2456 6.464222 CCATTATACGAGGATTCAAAGGCTA 58.536 40.000 0.00 0.00 0.00 3.93
2231 2457 5.308825 CCATTATACGAGGATTCAAAGGCT 58.691 41.667 0.00 0.00 0.00 4.58
2232 2458 4.083271 GCCATTATACGAGGATTCAAAGGC 60.083 45.833 0.00 0.00 0.00 4.35
2233 2459 5.063204 TGCCATTATACGAGGATTCAAAGG 58.937 41.667 0.00 0.00 0.00 3.11
2234 2460 6.618287 TTGCCATTATACGAGGATTCAAAG 57.382 37.500 0.00 0.00 0.00 2.77
2235 2461 7.397892 TTTTGCCATTATACGAGGATTCAAA 57.602 32.000 0.00 0.00 0.00 2.69
2236 2462 7.397892 TTTTTGCCATTATACGAGGATTCAA 57.602 32.000 0.00 0.00 0.00 2.69
2263 2489 9.653287 CGGAATATGTATATGTATTGTTGTCCT 57.347 33.333 0.00 0.00 0.00 3.85
2264 2490 9.431887 ACGGAATATGTATATGTATTGTTGTCC 57.568 33.333 0.00 0.00 0.00 4.02
2274 2500 8.092687 GGACCTTGTTACGGAATATGTATATGT 58.907 37.037 0.00 0.00 0.00 2.29
2275 2501 8.092068 TGGACCTTGTTACGGAATATGTATATG 58.908 37.037 0.00 0.00 0.00 1.78
2276 2502 8.092687 GTGGACCTTGTTACGGAATATGTATAT 58.907 37.037 0.00 0.00 0.00 0.86
2277 2503 7.069702 TGTGGACCTTGTTACGGAATATGTATA 59.930 37.037 0.00 0.00 0.00 1.47
2278 2504 6.126997 TGTGGACCTTGTTACGGAATATGTAT 60.127 38.462 0.00 0.00 0.00 2.29
2279 2505 5.187381 TGTGGACCTTGTTACGGAATATGTA 59.813 40.000 0.00 0.00 0.00 2.29
2280 2506 4.020039 TGTGGACCTTGTTACGGAATATGT 60.020 41.667 0.00 0.00 0.00 2.29
2281 2507 4.509616 TGTGGACCTTGTTACGGAATATG 58.490 43.478 0.00 0.00 0.00 1.78
2282 2508 4.829872 TGTGGACCTTGTTACGGAATAT 57.170 40.909 0.00 0.00 0.00 1.28
2283 2509 4.620589 TTGTGGACCTTGTTACGGAATA 57.379 40.909 0.00 0.00 0.00 1.75
2284 2510 3.495434 TTGTGGACCTTGTTACGGAAT 57.505 42.857 0.00 0.00 0.00 3.01
2285 2511 3.278668 TTTGTGGACCTTGTTACGGAA 57.721 42.857 0.00 0.00 0.00 4.30
2286 2512 2.944349 GTTTTGTGGACCTTGTTACGGA 59.056 45.455 0.00 0.00 0.00 4.69
2287 2513 2.683867 TGTTTTGTGGACCTTGTTACGG 59.316 45.455 0.00 0.00 0.00 4.02
2288 2514 4.561735 ATGTTTTGTGGACCTTGTTACG 57.438 40.909 0.00 0.00 0.00 3.18
2289 2515 9.968870 TTATTTATGTTTTGTGGACCTTGTTAC 57.031 29.630 0.00 0.00 0.00 2.50
2291 2517 9.320352 GTTTATTTATGTTTTGTGGACCTTGTT 57.680 29.630 0.00 0.00 0.00 2.83
2292 2518 8.478877 TGTTTATTTATGTTTTGTGGACCTTGT 58.521 29.630 0.00 0.00 0.00 3.16
2293 2519 8.879342 TGTTTATTTATGTTTTGTGGACCTTG 57.121 30.769 0.00 0.00 0.00 3.61
2311 2537 9.255304 ACGATGTTTGCAAAAACTATGTTTATT 57.745 25.926 14.67 0.00 33.95 1.40
2312 2538 8.698854 CACGATGTTTGCAAAAACTATGTTTAT 58.301 29.630 14.67 0.00 33.95 1.40
2313 2539 7.306283 GCACGATGTTTGCAAAAACTATGTTTA 60.306 33.333 14.67 0.00 39.93 2.01
2314 2540 6.509358 GCACGATGTTTGCAAAAACTATGTTT 60.509 34.615 14.67 0.00 39.93 2.83
2315 2541 5.051106 GCACGATGTTTGCAAAAACTATGTT 60.051 36.000 14.67 0.00 39.93 2.71
2316 2542 4.444056 GCACGATGTTTGCAAAAACTATGT 59.556 37.500 14.67 5.41 39.93 2.29
2317 2543 4.681025 AGCACGATGTTTGCAAAAACTATG 59.319 37.500 14.67 11.01 42.83 2.23
2318 2544 4.870363 AGCACGATGTTTGCAAAAACTAT 58.130 34.783 14.67 6.34 42.83 2.12
2319 2545 4.300189 AGCACGATGTTTGCAAAAACTA 57.700 36.364 14.67 1.27 42.83 2.24
2320 2546 3.163630 AGCACGATGTTTGCAAAAACT 57.836 38.095 14.67 0.95 42.83 2.66
2321 2547 4.679197 TCATAGCACGATGTTTGCAAAAAC 59.321 37.500 14.67 3.59 42.83 2.43
2322 2548 4.864633 TCATAGCACGATGTTTGCAAAAA 58.135 34.783 14.67 9.42 42.83 1.94
2323 2549 4.495911 TCATAGCACGATGTTTGCAAAA 57.504 36.364 14.67 5.00 42.83 2.44
2324 2550 4.495911 TTCATAGCACGATGTTTGCAAA 57.504 36.364 8.05 8.05 42.83 3.68
2325 2551 4.700268 ATTCATAGCACGATGTTTGCAA 57.300 36.364 0.00 0.00 42.83 4.08
2326 2552 4.273235 CCTATTCATAGCACGATGTTTGCA 59.727 41.667 0.00 0.00 42.83 4.08
2327 2553 4.273480 ACCTATTCATAGCACGATGTTTGC 59.727 41.667 0.00 0.00 40.52 3.68
2328 2554 5.991328 ACCTATTCATAGCACGATGTTTG 57.009 39.130 0.00 0.00 0.00 2.93
2329 2555 6.597672 TCAAACCTATTCATAGCACGATGTTT 59.402 34.615 0.00 0.00 0.00 2.83
2330 2556 6.112734 TCAAACCTATTCATAGCACGATGTT 58.887 36.000 0.00 0.00 0.00 2.71
2331 2557 5.670485 TCAAACCTATTCATAGCACGATGT 58.330 37.500 0.00 0.00 0.00 3.06
2332 2558 6.791887 ATCAAACCTATTCATAGCACGATG 57.208 37.500 0.00 0.00 0.00 3.84
2333 2559 7.716998 AGAAATCAAACCTATTCATAGCACGAT 59.283 33.333 0.00 0.00 0.00 3.73
2334 2560 7.047891 AGAAATCAAACCTATTCATAGCACGA 58.952 34.615 0.00 0.00 0.00 4.35
2335 2561 7.251704 AGAAATCAAACCTATTCATAGCACG 57.748 36.000 0.00 0.00 0.00 5.34
2336 2562 7.348201 CGAGAAATCAAACCTATTCATAGCAC 58.652 38.462 0.00 0.00 0.00 4.40
2337 2563 6.483307 CCGAGAAATCAAACCTATTCATAGCA 59.517 38.462 0.00 0.00 0.00 3.49
2338 2564 6.483640 ACCGAGAAATCAAACCTATTCATAGC 59.516 38.462 0.00 0.00 0.00 2.97
2339 2565 9.197694 CTACCGAGAAATCAAACCTATTCATAG 57.802 37.037 0.00 0.00 0.00 2.23
2340 2566 8.920174 TCTACCGAGAAATCAAACCTATTCATA 58.080 33.333 0.00 0.00 0.00 2.15
2341 2567 7.792032 TCTACCGAGAAATCAAACCTATTCAT 58.208 34.615 0.00 0.00 0.00 2.57
2342 2568 7.177832 TCTACCGAGAAATCAAACCTATTCA 57.822 36.000 0.00 0.00 0.00 2.57
2343 2569 8.664211 AATCTACCGAGAAATCAAACCTATTC 57.336 34.615 0.00 0.00 34.61 1.75
2344 2570 7.715686 GGAATCTACCGAGAAATCAAACCTATT 59.284 37.037 0.00 0.00 34.61 1.73
2345 2571 7.071321 AGGAATCTACCGAGAAATCAAACCTAT 59.929 37.037 0.00 0.00 34.61 2.57
2346 2572 6.383147 AGGAATCTACCGAGAAATCAAACCTA 59.617 38.462 0.00 0.00 34.61 3.08
2347 2573 5.189934 AGGAATCTACCGAGAAATCAAACCT 59.810 40.000 0.00 0.00 34.61 3.50
2348 2574 5.429130 AGGAATCTACCGAGAAATCAAACC 58.571 41.667 0.00 0.00 34.61 3.27
2349 2575 8.664211 ATTAGGAATCTACCGAGAAATCAAAC 57.336 34.615 0.00 0.00 34.61 2.93
2354 2580 9.640963 CGATTTATTAGGAATCTACCGAGAAAT 57.359 33.333 0.00 0.00 34.61 2.17
2355 2581 7.597743 GCGATTTATTAGGAATCTACCGAGAAA 59.402 37.037 0.00 0.00 34.61 2.52
2356 2582 7.039923 AGCGATTTATTAGGAATCTACCGAGAA 60.040 37.037 0.00 0.00 34.61 2.87
2357 2583 6.433404 AGCGATTTATTAGGAATCTACCGAGA 59.567 38.462 0.00 0.00 35.71 4.04
2358 2584 6.622549 AGCGATTTATTAGGAATCTACCGAG 58.377 40.000 0.00 0.00 32.60 4.63
2359 2585 6.585695 AGCGATTTATTAGGAATCTACCGA 57.414 37.500 0.00 0.00 32.60 4.69
2360 2586 6.645415 ACAAGCGATTTATTAGGAATCTACCG 59.355 38.462 0.00 0.00 32.60 4.02
2361 2587 7.964604 ACAAGCGATTTATTAGGAATCTACC 57.035 36.000 0.00 0.00 32.60 3.18
2364 2590 9.832445 TTCTAACAAGCGATTTATTAGGAATCT 57.168 29.630 12.08 0.00 32.60 2.40
2365 2591 9.865484 GTTCTAACAAGCGATTTATTAGGAATC 57.135 33.333 12.08 0.00 0.00 2.52
2366 2592 9.391006 TGTTCTAACAAGCGATTTATTAGGAAT 57.609 29.630 12.08 0.00 35.67 3.01
2367 2593 8.780846 TGTTCTAACAAGCGATTTATTAGGAA 57.219 30.769 12.08 5.35 35.67 3.36
2368 2594 8.780846 TTGTTCTAACAAGCGATTTATTAGGA 57.219 30.769 12.08 3.56 43.45 2.94
2383 2609 9.757227 CTTTTGGACCAATTTATTGTTCTAACA 57.243 29.630 7.99 0.00 31.51 2.41
2384 2610 9.974980 TCTTTTGGACCAATTTATTGTTCTAAC 57.025 29.630 7.99 0.00 31.51 2.34
2390 2616 9.418045 CGTTTATCTTTTGGACCAATTTATTGT 57.582 29.630 7.99 0.00 36.06 2.71
2391 2617 8.868916 CCGTTTATCTTTTGGACCAATTTATTG 58.131 33.333 7.99 0.00 37.52 1.90
2392 2618 7.547722 GCCGTTTATCTTTTGGACCAATTTATT 59.452 33.333 7.99 0.00 0.00 1.40
2393 2619 7.039270 GCCGTTTATCTTTTGGACCAATTTAT 58.961 34.615 7.99 4.53 0.00 1.40
2394 2620 6.015350 TGCCGTTTATCTTTTGGACCAATTTA 60.015 34.615 7.99 0.00 0.00 1.40
2395 2621 5.221541 TGCCGTTTATCTTTTGGACCAATTT 60.222 36.000 7.99 0.00 0.00 1.82
2396 2622 4.282195 TGCCGTTTATCTTTTGGACCAATT 59.718 37.500 7.99 0.00 0.00 2.32
2397 2623 3.829601 TGCCGTTTATCTTTTGGACCAAT 59.170 39.130 7.99 0.00 0.00 3.16
2398 2624 3.223435 TGCCGTTTATCTTTTGGACCAA 58.777 40.909 1.69 1.69 0.00 3.67
2399 2625 2.865079 TGCCGTTTATCTTTTGGACCA 58.135 42.857 0.00 0.00 0.00 4.02
2400 2626 3.926821 TTGCCGTTTATCTTTTGGACC 57.073 42.857 0.00 0.00 0.00 4.46
2401 2627 5.116069 TCTTTGCCGTTTATCTTTTGGAC 57.884 39.130 0.00 0.00 0.00 4.02
2402 2628 5.975693 ATCTTTGCCGTTTATCTTTTGGA 57.024 34.783 0.00 0.00 0.00 3.53
2403 2629 7.484959 GTCTTATCTTTGCCGTTTATCTTTTGG 59.515 37.037 0.00 0.00 0.00 3.28
2404 2630 8.020819 TGTCTTATCTTTGCCGTTTATCTTTTG 58.979 33.333 0.00 0.00 0.00 2.44
2405 2631 8.106247 TGTCTTATCTTTGCCGTTTATCTTTT 57.894 30.769 0.00 0.00 0.00 2.27
2406 2632 7.681939 TGTCTTATCTTTGCCGTTTATCTTT 57.318 32.000 0.00 0.00 0.00 2.52
2407 2633 7.865706 ATGTCTTATCTTTGCCGTTTATCTT 57.134 32.000 0.00 0.00 0.00 2.40
2408 2634 8.958119 TTATGTCTTATCTTTGCCGTTTATCT 57.042 30.769 0.00 0.00 0.00 1.98
2409 2635 9.813080 GATTATGTCTTATCTTTGCCGTTTATC 57.187 33.333 0.00 0.00 0.00 1.75
2410 2636 9.561069 AGATTATGTCTTATCTTTGCCGTTTAT 57.439 29.630 0.00 0.00 31.47 1.40
2411 2637 8.958119 AGATTATGTCTTATCTTTGCCGTTTA 57.042 30.769 0.00 0.00 31.47 2.01
2412 2638 7.865706 AGATTATGTCTTATCTTTGCCGTTT 57.134 32.000 0.00 0.00 31.47 3.60
2413 2639 7.865706 AAGATTATGTCTTATCTTTGCCGTT 57.134 32.000 0.00 0.00 45.28 4.44
2424 2650 7.093465 GGGGATGACCGATAAGATTATGTCTTA 60.093 40.741 5.26 5.26 45.58 2.10
2425 2651 6.295916 GGGGATGACCGATAAGATTATGTCTT 60.296 42.308 0.00 1.53 44.59 3.01
2426 2652 5.187967 GGGGATGACCGATAAGATTATGTCT 59.812 44.000 0.00 0.00 41.60 3.41
2427 2653 5.187967 AGGGGATGACCGATAAGATTATGTC 59.812 44.000 0.00 0.00 41.60 3.06
2428 2654 5.046304 CAGGGGATGACCGATAAGATTATGT 60.046 44.000 0.00 0.00 41.60 2.29
2429 2655 5.187772 TCAGGGGATGACCGATAAGATTATG 59.812 44.000 0.00 0.00 41.60 1.90
2430 2656 5.342017 TCAGGGGATGACCGATAAGATTAT 58.658 41.667 0.00 0.00 41.60 1.28
2431 2657 4.747583 TCAGGGGATGACCGATAAGATTA 58.252 43.478 0.00 0.00 41.60 1.75
2432 2658 3.587498 TCAGGGGATGACCGATAAGATT 58.413 45.455 0.00 0.00 41.60 2.40
2433 2659 3.260269 TCAGGGGATGACCGATAAGAT 57.740 47.619 0.00 0.00 41.60 2.40
2434 2660 2.767644 TCAGGGGATGACCGATAAGA 57.232 50.000 0.00 0.00 41.60 2.10
2435 2661 4.772624 TCTAATCAGGGGATGACCGATAAG 59.227 45.833 0.00 0.00 41.91 1.73
2436 2662 4.747583 TCTAATCAGGGGATGACCGATAA 58.252 43.478 0.00 0.00 41.91 1.75
2437 2663 4.044191 TCTCTAATCAGGGGATGACCGATA 59.956 45.833 0.00 0.00 41.91 2.92
2438 2664 3.169099 CTCTAATCAGGGGATGACCGAT 58.831 50.000 0.00 0.00 41.91 4.18
2439 2665 2.177016 TCTCTAATCAGGGGATGACCGA 59.823 50.000 0.00 0.00 41.91 4.69
2440 2666 2.598565 TCTCTAATCAGGGGATGACCG 58.401 52.381 0.00 0.00 41.91 4.79
2441 2667 6.688073 TTTATCTCTAATCAGGGGATGACC 57.312 41.667 0.00 0.00 41.91 4.02
2442 2668 7.609532 CCAATTTATCTCTAATCAGGGGATGAC 59.390 40.741 0.00 0.00 41.91 3.06
2443 2669 7.517254 TCCAATTTATCTCTAATCAGGGGATGA 59.483 37.037 0.00 0.00 43.70 2.92
2444 2670 7.693132 TCCAATTTATCTCTAATCAGGGGATG 58.307 38.462 0.00 0.00 32.92 3.51
2445 2671 7.895144 TCCAATTTATCTCTAATCAGGGGAT 57.105 36.000 0.00 0.00 34.43 3.85
2446 2672 7.572485 TCTTCCAATTTATCTCTAATCAGGGGA 59.428 37.037 0.00 0.00 0.00 4.81
2447 2673 7.749666 TCTTCCAATTTATCTCTAATCAGGGG 58.250 38.462 0.00 0.00 0.00 4.79
2448 2674 9.804977 AATCTTCCAATTTATCTCTAATCAGGG 57.195 33.333 0.00 0.00 0.00 4.45
2456 2682 9.277783 CACCGATTAATCTTCCAATTTATCTCT 57.722 33.333 13.45 0.00 0.00 3.10
2457 2683 9.273016 TCACCGATTAATCTTCCAATTTATCTC 57.727 33.333 13.45 0.00 0.00 2.75
2458 2684 9.627123 TTCACCGATTAATCTTCCAATTTATCT 57.373 29.630 13.45 0.00 0.00 1.98
2461 2687 8.556194 CGATTCACCGATTAATCTTCCAATTTA 58.444 33.333 13.45 0.00 31.29 1.40
2462 2688 7.417612 CGATTCACCGATTAATCTTCCAATTT 58.582 34.615 13.45 0.00 31.29 1.82
2463 2689 6.017109 CCGATTCACCGATTAATCTTCCAATT 60.017 38.462 13.45 0.00 31.29 2.32
2464 2690 5.470098 CCGATTCACCGATTAATCTTCCAAT 59.530 40.000 13.45 6.59 31.29 3.16
2465 2691 4.814234 CCGATTCACCGATTAATCTTCCAA 59.186 41.667 13.45 2.29 31.29 3.53
2466 2692 4.100344 TCCGATTCACCGATTAATCTTCCA 59.900 41.667 13.45 0.00 31.29 3.53
2467 2693 4.628074 TCCGATTCACCGATTAATCTTCC 58.372 43.478 13.45 0.00 31.29 3.46
2468 2694 5.983720 TCTTCCGATTCACCGATTAATCTTC 59.016 40.000 13.45 1.03 31.29 2.87
2469 2695 5.914033 TCTTCCGATTCACCGATTAATCTT 58.086 37.500 13.45 0.00 31.29 2.40
2470 2696 5.531122 TCTTCCGATTCACCGATTAATCT 57.469 39.130 13.45 0.00 31.29 2.40
2471 2697 6.787085 AATCTTCCGATTCACCGATTAATC 57.213 37.500 5.30 5.30 34.88 1.75
2472 2698 6.992715 AGAAATCTTCCGATTCACCGATTAAT 59.007 34.615 0.00 0.00 38.89 1.40
2473 2699 6.346096 AGAAATCTTCCGATTCACCGATTAA 58.654 36.000 0.00 0.00 38.89 1.40
2474 2700 5.914033 AGAAATCTTCCGATTCACCGATTA 58.086 37.500 0.00 0.00 38.89 1.75
2475 2701 4.770795 AGAAATCTTCCGATTCACCGATT 58.229 39.130 0.00 0.00 38.89 3.34
2476 2702 4.408182 AGAAATCTTCCGATTCACCGAT 57.592 40.909 0.00 0.00 38.89 4.18
2477 2703 3.887621 AGAAATCTTCCGATTCACCGA 57.112 42.857 0.00 0.00 38.89 4.69
2478 2704 3.932710 TCAAGAAATCTTCCGATTCACCG 59.067 43.478 0.00 0.00 38.89 4.94
2479 2705 5.181245 TGTTCAAGAAATCTTCCGATTCACC 59.819 40.000 0.00 0.00 38.89 4.02
2480 2706 6.241207 TGTTCAAGAAATCTTCCGATTCAC 57.759 37.500 0.00 0.00 38.89 3.18
2481 2707 6.875948 TTGTTCAAGAAATCTTCCGATTCA 57.124 33.333 0.00 0.00 38.89 2.57
2482 2708 6.252228 GCATTGTTCAAGAAATCTTCCGATTC 59.748 38.462 0.00 0.00 38.89 2.52
2483 2709 6.071728 AGCATTGTTCAAGAAATCTTCCGATT 60.072 34.615 0.00 0.00 41.53 3.34
2484 2710 5.416952 AGCATTGTTCAAGAAATCTTCCGAT 59.583 36.000 0.00 0.00 33.11 4.18
2485 2711 4.761739 AGCATTGTTCAAGAAATCTTCCGA 59.238 37.500 0.00 0.00 33.11 4.55
2486 2712 5.051891 AGCATTGTTCAAGAAATCTTCCG 57.948 39.130 0.00 0.00 33.11 4.30
2487 2713 8.992835 AAATAGCATTGTTCAAGAAATCTTCC 57.007 30.769 0.00 0.00 33.11 3.46
2489 2715 9.768662 ACAAAATAGCATTGTTCAAGAAATCTT 57.231 25.926 0.00 0.00 37.74 2.40
2540 2768 9.787532 ATCATAAACACAACATATGTTAACAGC 57.212 29.630 20.39 0.00 41.46 4.40
2810 3276 4.981794 AGAAACAAAGAACACAAGGAACG 58.018 39.130 0.00 0.00 0.00 3.95
2874 3345 0.882927 CAAGCCAGACGAAAACCGGA 60.883 55.000 9.46 0.00 43.93 5.14
2875 3346 1.574428 CAAGCCAGACGAAAACCGG 59.426 57.895 0.00 0.00 43.93 5.28
3048 3519 4.725790 ATATTTTTGCCAAGGCTGTCTC 57.274 40.909 12.96 0.00 42.51 3.36
3087 3558 4.327357 CGTTATCCTGTGTCTCATTGTCAC 59.673 45.833 0.00 0.00 35.73 3.67
3115 3586 1.401905 TCATCATCACCAGAGTCGTCG 59.598 52.381 0.00 0.00 0.00 5.12
3126 3597 8.429493 TTGAAAGTCTGTATCATCATCATCAC 57.571 34.615 0.00 0.00 0.00 3.06
3200 3702 3.120086 AAGCCACGTTCACTGCCCT 62.120 57.895 0.00 0.00 0.00 5.19
3247 3842 1.371337 TTGCATCATCTGAGTGCGGC 61.371 55.000 0.00 0.00 41.61 6.53
3275 3871 1.361197 TCCTCCTACCCTGTCATGTGA 59.639 52.381 0.00 0.00 0.00 3.58
3286 3882 2.742204 GCCTTCGACAATTCCTCCTACC 60.742 54.545 0.00 0.00 0.00 3.18
3291 3887 1.464997 GTGTGCCTTCGACAATTCCTC 59.535 52.381 0.00 0.00 0.00 3.71
3297 3893 0.531974 GTCAGGTGTGCCTTCGACAA 60.532 55.000 0.00 0.00 44.18 3.18
3317 3913 2.660258 ATAGGTTCATCGCCCGCACC 62.660 60.000 0.00 0.00 0.00 5.01
3357 3953 4.944930 AGATCGTGTTAGAAGTAGCAGTCT 59.055 41.667 0.00 0.00 0.00 3.24
3358 3954 5.163744 TGAGATCGTGTTAGAAGTAGCAGTC 60.164 44.000 0.00 0.00 0.00 3.51
3377 3973 2.739996 CCCCTGAGCCGCTTGAGAT 61.740 63.158 0.00 0.00 0.00 2.75
3441 4037 2.103094 TCCATAGAAGAATCAGTGGCCG 59.897 50.000 0.00 0.00 34.27 6.13
3451 4047 4.637534 GCACTGCATCTTTCCATAGAAGAA 59.362 41.667 0.00 0.00 36.77 2.52
3458 4054 2.366533 CTGAGCACTGCATCTTTCCAT 58.633 47.619 3.30 0.00 0.00 3.41
3461 4057 1.451067 AGCTGAGCACTGCATCTTTC 58.549 50.000 7.39 0.00 42.14 2.62
3484 4080 6.918569 GCTTCTGCTCATAAGACGAAGTATTA 59.081 38.462 0.00 0.00 41.37 0.98
3492 4088 0.574454 GCGCTTCTGCTCATAAGACG 59.426 55.000 0.00 4.24 36.97 4.18
3500 4096 0.723981 AAATTCTCGCGCTTCTGCTC 59.276 50.000 5.56 0.00 36.97 4.26
3507 4103 1.078848 AGCCTCAAATTCTCGCGCT 60.079 52.632 5.56 0.00 0.00 5.92
3512 4108 2.617774 GAGATGGCAGCCTCAAATTCTC 59.382 50.000 14.15 10.42 0.00 2.87
3526 4122 2.191641 GGACAGGGCAGAGATGGC 59.808 66.667 0.00 0.00 0.00 4.40
3561 4157 0.179062 CCTATCTGACAGCTGGGCAC 60.179 60.000 19.93 7.07 0.00 5.01
3624 4220 1.354337 CTTGTCAGCCACACGGATCG 61.354 60.000 0.00 0.00 33.41 3.69
3765 4367 9.016623 GGAGTGTCAAAAATACAGTAACAAAAC 57.983 33.333 0.00 0.00 30.68 2.43
3790 4392 5.467035 ACCAACAATTGAAACTACCATGG 57.533 39.130 13.59 11.19 0.00 3.66
3956 4579 7.093552 GGATACTAGATGATGCCTCAAGTGTAT 60.094 40.741 0.00 3.54 34.37 2.29
4077 4709 9.606631 AGAAGTAGCATTATGAAACCTAAAGAG 57.393 33.333 0.00 0.00 0.00 2.85
4363 5021 1.157870 AGACTTGTTTGTCGGGTGCG 61.158 55.000 0.00 0.00 41.47 5.34
4585 5248 3.868661 TGACCACGATGAATAATCAACCG 59.131 43.478 0.00 4.92 39.49 4.44
4745 5545 6.813649 TGATAAGAAGTTGTGAGATGTAGTGC 59.186 38.462 0.00 0.00 0.00 4.40
4811 5613 5.376854 TGTAGCAGCCTTCTTTTGATTTC 57.623 39.130 0.00 0.00 0.00 2.17
4880 5682 2.307768 CCTCTACCGGCTGTGAAGATA 58.692 52.381 0.00 0.00 0.00 1.98
4927 5730 1.323271 ACGACATCAGGAGGCGTCAT 61.323 55.000 8.91 0.00 0.00 3.06
4933 5736 2.455674 TGTGAAACGACATCAGGAGG 57.544 50.000 0.00 0.00 42.39 4.30
5065 5868 0.514691 GCGAGCTCTTCAACAACAGG 59.485 55.000 12.85 0.00 0.00 4.00
5092 5895 6.040247 CAGCATGCAATTCATCATTAACAGT 58.960 36.000 21.98 0.00 31.79 3.55
5509 6317 1.278985 CATGAGAGGGTAGTGGCACAA 59.721 52.381 21.41 0.00 44.16 3.33
5638 6448 9.251440 ACAATGATACTTAGTAGGACAACACTA 57.749 33.333 0.00 0.00 0.00 2.74
5650 6460 5.815581 TCAGGCCAAACAATGATACTTAGT 58.184 37.500 5.01 0.00 0.00 2.24
5651 6461 6.949352 ATCAGGCCAAACAATGATACTTAG 57.051 37.500 5.01 0.00 30.78 2.18
5657 6467 6.211184 TCAAAGTTATCAGGCCAAACAATGAT 59.789 34.615 5.01 6.85 36.42 2.45
5704 6514 4.102524 AGGTGTTGTGAAGACTGTATTGGA 59.897 41.667 0.00 0.00 0.00 3.53
5751 6561 4.915194 AGATAGAGTGGTAGGTACTAGGCT 59.085 45.833 0.00 0.00 44.14 4.58
5757 6567 4.511082 GTGTCGAGATAGAGTGGTAGGTAC 59.489 50.000 0.00 0.00 0.00 3.34
5760 6570 3.811083 AGTGTCGAGATAGAGTGGTAGG 58.189 50.000 0.00 0.00 0.00 3.18
5774 6584 4.276678 CCGTATTGGGTAAGATAGTGTCGA 59.723 45.833 0.00 0.00 0.00 4.20
5776 6586 4.304939 GCCGTATTGGGTAAGATAGTGTC 58.695 47.826 0.00 0.00 38.63 3.67
5780 6590 4.315803 CAAGGCCGTATTGGGTAAGATAG 58.684 47.826 0.00 0.00 38.63 2.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.