Multiple sequence alignment - TraesCS3A01G376200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G376200 chr3A 100.000 2924 0 0 1 2924 625211615 625208692 0.000000e+00 5400.0
1 TraesCS3A01G376200 chr3A 88.901 946 94 8 1003 1943 623610041 623610980 0.000000e+00 1155.0
2 TraesCS3A01G376200 chr3A 74.393 824 158 40 1085 1883 598553493 598554288 1.320000e-78 303.0
3 TraesCS3A01G376200 chr3A 75.583 643 114 31 1092 1723 448701993 448702603 7.980000e-71 278.0
4 TraesCS3A01G376200 chr3A 100.000 42 0 0 1 42 20022820 20022779 8.690000e-11 78.7
5 TraesCS3A01G376200 chr3D 93.298 2432 109 17 528 2924 482191568 482189156 0.000000e+00 3539.0
6 TraesCS3A01G376200 chr3D 89.968 947 82 10 1003 1943 480842367 480843306 0.000000e+00 1210.0
7 TraesCS3A01G376200 chr3D 75.030 825 151 39 1085 1883 455869729 455870524 6.040000e-87 331.0
8 TraesCS3A01G376200 chr3D 74.961 643 118 30 1092 1723 331657194 331657804 3.740000e-64 255.0
9 TraesCS3A01G376200 chr3B 90.611 1768 90 40 576 2323 644173104 644171393 0.000000e+00 2276.0
10 TraesCS3A01G376200 chr3B 87.358 965 92 10 1003 1943 641660625 641661583 0.000000e+00 1079.0
11 TraesCS3A01G376200 chr3B 92.320 612 41 4 2318 2924 644166382 644165772 0.000000e+00 865.0
12 TraesCS3A01G376200 chr3B 74.969 819 156 38 1085 1883 602331250 602332039 6.040000e-87 331.0
13 TraesCS3A01G376200 chr3B 74.969 819 156 38 1085 1883 602352332 602353121 6.040000e-87 331.0
14 TraesCS3A01G376200 chr3B 75.465 591 107 27 1092 1672 431040222 431040784 1.340000e-63 254.0
15 TraesCS3A01G376200 chr3B 71.785 801 164 47 1098 1867 473694398 473693629 1.390000e-38 171.0
16 TraesCS3A01G376200 chr3B 97.619 42 1 0 1 42 762634269 762634310 4.040000e-09 73.1
17 TraesCS3A01G376200 chrUn 100.000 42 0 0 1 42 407850133 407850174 8.690000e-11 78.7
18 TraesCS3A01G376200 chr7A 100.000 42 0 0 1 42 660469077 660469036 8.690000e-11 78.7
19 TraesCS3A01G376200 chr6B 100.000 42 0 0 1 42 586520346 586520305 8.690000e-11 78.7
20 TraesCS3A01G376200 chr6B 97.619 42 1 0 1 42 52162138 52162179 4.040000e-09 73.1
21 TraesCS3A01G376200 chr5A 97.500 40 1 0 1 40 4692111 4692072 5.230000e-08 69.4
22 TraesCS3A01G376200 chr6A 100.000 28 0 0 530 557 81846881 81846908 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G376200 chr3A 625208692 625211615 2923 True 5400 5400 100.000 1 2924 1 chr3A.!!$R2 2923
1 TraesCS3A01G376200 chr3A 623610041 623610980 939 False 1155 1155 88.901 1003 1943 1 chr3A.!!$F3 940
2 TraesCS3A01G376200 chr3A 598553493 598554288 795 False 303 303 74.393 1085 1883 1 chr3A.!!$F2 798
3 TraesCS3A01G376200 chr3A 448701993 448702603 610 False 278 278 75.583 1092 1723 1 chr3A.!!$F1 631
4 TraesCS3A01G376200 chr3D 482189156 482191568 2412 True 3539 3539 93.298 528 2924 1 chr3D.!!$R1 2396
5 TraesCS3A01G376200 chr3D 480842367 480843306 939 False 1210 1210 89.968 1003 1943 1 chr3D.!!$F3 940
6 TraesCS3A01G376200 chr3D 455869729 455870524 795 False 331 331 75.030 1085 1883 1 chr3D.!!$F2 798
7 TraesCS3A01G376200 chr3D 331657194 331657804 610 False 255 255 74.961 1092 1723 1 chr3D.!!$F1 631
8 TraesCS3A01G376200 chr3B 644171393 644173104 1711 True 2276 2276 90.611 576 2323 1 chr3B.!!$R3 1747
9 TraesCS3A01G376200 chr3B 641660625 641661583 958 False 1079 1079 87.358 1003 1943 1 chr3B.!!$F4 940
10 TraesCS3A01G376200 chr3B 644165772 644166382 610 True 865 865 92.320 2318 2924 1 chr3B.!!$R2 606
11 TraesCS3A01G376200 chr3B 602331250 602332039 789 False 331 331 74.969 1085 1883 1 chr3B.!!$F2 798
12 TraesCS3A01G376200 chr3B 602352332 602353121 789 False 331 331 74.969 1085 1883 1 chr3B.!!$F3 798
13 TraesCS3A01G376200 chr3B 431040222 431040784 562 False 254 254 75.465 1092 1672 1 chr3B.!!$F1 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 344 0.033208 GGGATGGTGCTTTGGGATCA 60.033 55.0 0.0 0.0 0.0 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1937 2019 0.247736 CTGACCCGAGCTTAGCAGTT 59.752 55.0 7.07 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.759059 TGCATCTTTTCTCTATGGGAATGT 58.241 37.500 0.00 0.00 0.00 2.71
24 25 6.189859 TGCATCTTTTCTCTATGGGAATGTT 58.810 36.000 0.00 0.00 0.00 2.71
25 26 6.095860 TGCATCTTTTCTCTATGGGAATGTTG 59.904 38.462 0.00 0.00 0.00 3.33
26 27 6.501781 CATCTTTTCTCTATGGGAATGTTGC 58.498 40.000 0.00 0.00 0.00 4.17
27 28 4.635765 TCTTTTCTCTATGGGAATGTTGCG 59.364 41.667 0.00 0.00 0.00 4.85
28 29 3.904800 TTCTCTATGGGAATGTTGCGA 57.095 42.857 0.00 0.00 0.00 5.10
29 30 3.904800 TCTCTATGGGAATGTTGCGAA 57.095 42.857 0.00 0.00 0.00 4.70
30 31 3.531538 TCTCTATGGGAATGTTGCGAAC 58.468 45.455 0.00 0.00 0.00 3.95
31 32 2.614057 CTCTATGGGAATGTTGCGAACC 59.386 50.000 0.00 0.00 0.00 3.62
32 33 1.676006 CTATGGGAATGTTGCGAACCC 59.324 52.381 0.00 0.00 40.79 4.11
33 34 0.039618 ATGGGAATGTTGCGAACCCT 59.960 50.000 0.00 0.00 40.98 4.34
34 35 0.693622 TGGGAATGTTGCGAACCCTA 59.306 50.000 0.00 0.00 40.98 3.53
35 36 1.074084 TGGGAATGTTGCGAACCCTAA 59.926 47.619 0.00 0.00 40.98 2.69
36 37 1.471287 GGGAATGTTGCGAACCCTAAC 59.529 52.381 0.00 0.00 37.75 2.34
37 38 1.471287 GGAATGTTGCGAACCCTAACC 59.529 52.381 0.00 0.00 0.00 2.85
38 39 1.471287 GAATGTTGCGAACCCTAACCC 59.529 52.381 0.00 0.00 0.00 4.11
39 40 0.402504 ATGTTGCGAACCCTAACCCA 59.597 50.000 0.00 0.00 0.00 4.51
40 41 0.402504 TGTTGCGAACCCTAACCCAT 59.597 50.000 0.00 0.00 0.00 4.00
41 42 0.808755 GTTGCGAACCCTAACCCATG 59.191 55.000 0.00 0.00 0.00 3.66
42 43 0.322997 TTGCGAACCCTAACCCATGG 60.323 55.000 4.14 4.14 0.00 3.66
43 44 1.202099 TGCGAACCCTAACCCATGGA 61.202 55.000 15.22 0.00 0.00 3.41
44 45 0.034863 GCGAACCCTAACCCATGGAA 60.035 55.000 15.22 0.00 0.00 3.53
45 46 1.409661 GCGAACCCTAACCCATGGAAT 60.410 52.381 15.22 3.62 0.00 3.01
46 47 2.948600 GCGAACCCTAACCCATGGAATT 60.949 50.000 15.22 9.93 0.00 2.17
47 48 3.686120 GCGAACCCTAACCCATGGAATTA 60.686 47.826 15.22 10.59 0.00 1.40
48 49 4.725490 CGAACCCTAACCCATGGAATTAT 58.275 43.478 15.22 0.00 0.00 1.28
49 50 5.746656 GCGAACCCTAACCCATGGAATTATA 60.747 44.000 15.22 0.00 0.00 0.98
50 51 6.481643 CGAACCCTAACCCATGGAATTATAT 58.518 40.000 15.22 0.00 0.00 0.86
51 52 6.946009 CGAACCCTAACCCATGGAATTATATT 59.054 38.462 15.22 6.22 0.00 1.28
52 53 8.104566 CGAACCCTAACCCATGGAATTATATTA 58.895 37.037 15.22 0.00 0.00 0.98
53 54 9.816787 GAACCCTAACCCATGGAATTATATTAA 57.183 33.333 15.22 0.00 0.00 1.40
94 95 4.946160 AAAGAAATGTATGGACCCCTCA 57.054 40.909 0.00 0.00 0.00 3.86
95 96 4.946160 AAGAAATGTATGGACCCCTCAA 57.054 40.909 0.00 0.00 0.00 3.02
96 97 4.236527 AGAAATGTATGGACCCCTCAAC 57.763 45.455 0.00 0.00 0.00 3.18
97 98 2.710096 AATGTATGGACCCCTCAACG 57.290 50.000 0.00 0.00 0.00 4.10
98 99 0.837272 ATGTATGGACCCCTCAACGG 59.163 55.000 0.00 0.00 0.00 4.44
99 100 1.153229 GTATGGACCCCTCAACGGC 60.153 63.158 0.00 0.00 0.00 5.68
100 101 2.372074 TATGGACCCCTCAACGGCC 61.372 63.158 0.00 0.00 0.00 6.13
106 107 3.979497 CCCTCAACGGCCCCCTTT 61.979 66.667 0.00 0.00 0.00 3.11
107 108 2.361230 CCTCAACGGCCCCCTTTC 60.361 66.667 0.00 0.00 0.00 2.62
108 109 2.757077 CTCAACGGCCCCCTTTCT 59.243 61.111 0.00 0.00 0.00 2.52
109 110 1.377333 CTCAACGGCCCCCTTTCTC 60.377 63.158 0.00 0.00 0.00 2.87
110 111 2.746277 CAACGGCCCCCTTTCTCG 60.746 66.667 0.00 0.00 0.00 4.04
111 112 2.926242 AACGGCCCCCTTTCTCGA 60.926 61.111 0.00 0.00 0.00 4.04
112 113 3.249837 AACGGCCCCCTTTCTCGAC 62.250 63.158 0.00 0.00 0.00 4.20
113 114 4.468689 CGGCCCCCTTTCTCGACC 62.469 72.222 0.00 0.00 0.00 4.79
114 115 3.009714 GGCCCCCTTTCTCGACCT 61.010 66.667 0.00 0.00 0.00 3.85
115 116 1.688187 GGCCCCCTTTCTCGACCTA 60.688 63.158 0.00 0.00 0.00 3.08
116 117 1.687297 GGCCCCCTTTCTCGACCTAG 61.687 65.000 0.00 0.00 0.00 3.02
117 118 0.976590 GCCCCCTTTCTCGACCTAGT 60.977 60.000 0.00 0.00 0.00 2.57
118 119 1.687368 GCCCCCTTTCTCGACCTAGTA 60.687 57.143 0.00 0.00 0.00 1.82
119 120 2.308690 CCCCCTTTCTCGACCTAGTAG 58.691 57.143 0.00 0.00 0.00 2.57
120 121 2.357986 CCCCCTTTCTCGACCTAGTAGT 60.358 54.545 0.00 0.00 0.00 2.73
121 122 2.688958 CCCCTTTCTCGACCTAGTAGTG 59.311 54.545 0.00 0.00 0.00 2.74
122 123 2.688958 CCCTTTCTCGACCTAGTAGTGG 59.311 54.545 0.00 0.00 0.00 4.00
123 124 2.099427 CCTTTCTCGACCTAGTAGTGGC 59.901 54.545 0.00 0.00 0.00 5.01
124 125 2.803030 TTCTCGACCTAGTAGTGGCT 57.197 50.000 0.00 0.00 0.00 4.75
125 126 3.920231 TTCTCGACCTAGTAGTGGCTA 57.080 47.619 0.00 0.00 0.00 3.93
126 127 3.920231 TCTCGACCTAGTAGTGGCTAA 57.080 47.619 0.00 0.00 0.00 3.09
127 128 3.806380 TCTCGACCTAGTAGTGGCTAAG 58.194 50.000 0.00 0.00 0.00 2.18
128 129 2.879646 CTCGACCTAGTAGTGGCTAAGG 59.120 54.545 0.00 0.00 0.00 2.69
129 130 2.240667 TCGACCTAGTAGTGGCTAAGGT 59.759 50.000 0.00 0.00 0.00 3.50
130 131 2.617774 CGACCTAGTAGTGGCTAAGGTC 59.382 54.545 7.62 7.62 36.73 3.85
131 132 3.684981 CGACCTAGTAGTGGCTAAGGTCT 60.685 52.174 13.94 0.00 37.26 3.85
132 133 3.884693 GACCTAGTAGTGGCTAAGGTCTC 59.115 52.174 9.90 0.00 36.91 3.36
133 134 3.224269 CCTAGTAGTGGCTAAGGTCTCC 58.776 54.545 0.00 0.00 0.00 3.71
134 135 2.921834 AGTAGTGGCTAAGGTCTCCA 57.078 50.000 0.00 0.00 0.00 3.86
135 136 3.406512 AGTAGTGGCTAAGGTCTCCAT 57.593 47.619 0.00 0.00 31.83 3.41
136 137 3.034635 AGTAGTGGCTAAGGTCTCCATG 58.965 50.000 0.00 0.00 31.83 3.66
137 138 1.958288 AGTGGCTAAGGTCTCCATGT 58.042 50.000 0.00 0.00 31.83 3.21
138 139 2.269940 AGTGGCTAAGGTCTCCATGTT 58.730 47.619 0.00 0.00 31.83 2.71
139 140 2.026822 AGTGGCTAAGGTCTCCATGTTG 60.027 50.000 0.00 0.00 31.83 3.33
140 141 1.340017 TGGCTAAGGTCTCCATGTTGC 60.340 52.381 0.00 0.00 0.00 4.17
141 142 1.383523 GCTAAGGTCTCCATGTTGCC 58.616 55.000 0.00 0.00 0.00 4.52
142 143 1.656652 CTAAGGTCTCCATGTTGCCG 58.343 55.000 0.00 0.00 0.00 5.69
143 144 0.392461 TAAGGTCTCCATGTTGCCGC 60.392 55.000 0.00 0.00 0.00 6.53
144 145 3.134127 GGTCTCCATGTTGCCGCC 61.134 66.667 0.00 0.00 0.00 6.13
145 146 2.045926 GTCTCCATGTTGCCGCCT 60.046 61.111 0.00 0.00 0.00 5.52
146 147 2.109126 GTCTCCATGTTGCCGCCTC 61.109 63.158 0.00 0.00 0.00 4.70
147 148 3.197790 CTCCATGTTGCCGCCTCG 61.198 66.667 0.00 0.00 0.00 4.63
157 158 4.547367 CCGCCTCGGTCCCATTCC 62.547 72.222 0.00 0.00 42.73 3.01
158 159 3.470888 CGCCTCGGTCCCATTCCT 61.471 66.667 0.00 0.00 0.00 3.36
159 160 2.131709 CGCCTCGGTCCCATTCCTA 61.132 63.158 0.00 0.00 0.00 2.94
160 161 1.472662 CGCCTCGGTCCCATTCCTAT 61.473 60.000 0.00 0.00 0.00 2.57
161 162 0.321996 GCCTCGGTCCCATTCCTATC 59.678 60.000 0.00 0.00 0.00 2.08
162 163 0.977395 CCTCGGTCCCATTCCTATCC 59.023 60.000 0.00 0.00 0.00 2.59
163 164 0.977395 CTCGGTCCCATTCCTATCCC 59.023 60.000 0.00 0.00 0.00 3.85
164 165 0.566176 TCGGTCCCATTCCTATCCCT 59.434 55.000 0.00 0.00 0.00 4.20
165 166 1.061657 TCGGTCCCATTCCTATCCCTT 60.062 52.381 0.00 0.00 0.00 3.95
166 167 1.072331 CGGTCCCATTCCTATCCCTTG 59.928 57.143 0.00 0.00 0.00 3.61
167 168 2.418669 GGTCCCATTCCTATCCCTTGA 58.581 52.381 0.00 0.00 0.00 3.02
168 169 2.106684 GGTCCCATTCCTATCCCTTGAC 59.893 54.545 0.00 0.00 0.00 3.18
169 170 2.106684 GTCCCATTCCTATCCCTTGACC 59.893 54.545 0.00 0.00 0.00 4.02
170 171 2.135189 CCCATTCCTATCCCTTGACCA 58.865 52.381 0.00 0.00 0.00 4.02
171 172 2.107204 CCCATTCCTATCCCTTGACCAG 59.893 54.545 0.00 0.00 0.00 4.00
172 173 2.780010 CCATTCCTATCCCTTGACCAGT 59.220 50.000 0.00 0.00 0.00 4.00
173 174 3.203040 CCATTCCTATCCCTTGACCAGTT 59.797 47.826 0.00 0.00 0.00 3.16
174 175 4.202441 CATTCCTATCCCTTGACCAGTTG 58.798 47.826 0.00 0.00 0.00 3.16
175 176 1.559682 TCCTATCCCTTGACCAGTTGC 59.440 52.381 0.00 0.00 0.00 4.17
176 177 1.408822 CCTATCCCTTGACCAGTTGCC 60.409 57.143 0.00 0.00 0.00 4.52
177 178 1.561542 CTATCCCTTGACCAGTTGCCT 59.438 52.381 0.00 0.00 0.00 4.75
178 179 0.329596 ATCCCTTGACCAGTTGCCTC 59.670 55.000 0.00 0.00 0.00 4.70
179 180 1.059584 TCCCTTGACCAGTTGCCTCA 61.060 55.000 0.00 0.00 0.00 3.86
180 181 0.038744 CCCTTGACCAGTTGCCTCAT 59.961 55.000 0.00 0.00 0.00 2.90
181 182 1.457346 CCTTGACCAGTTGCCTCATC 58.543 55.000 0.00 0.00 0.00 2.92
182 183 1.081892 CTTGACCAGTTGCCTCATCG 58.918 55.000 0.00 0.00 0.00 3.84
183 184 0.684535 TTGACCAGTTGCCTCATCGA 59.315 50.000 0.00 0.00 0.00 3.59
184 185 0.037326 TGACCAGTTGCCTCATCGAC 60.037 55.000 0.00 0.00 0.00 4.20
185 186 1.078759 GACCAGTTGCCTCATCGACG 61.079 60.000 0.00 0.00 0.00 5.12
186 187 1.811266 CCAGTTGCCTCATCGACGG 60.811 63.158 0.00 0.00 0.00 4.79
187 188 1.079819 CAGTTGCCTCATCGACGGT 60.080 57.895 0.00 0.00 0.00 4.83
188 189 1.078759 CAGTTGCCTCATCGACGGTC 61.079 60.000 0.00 0.00 0.00 4.79
189 190 1.080093 GTTGCCTCATCGACGGTCA 60.080 57.895 9.10 0.00 0.00 4.02
190 191 1.078759 GTTGCCTCATCGACGGTCAG 61.079 60.000 9.10 1.49 0.00 3.51
191 192 1.248101 TTGCCTCATCGACGGTCAGA 61.248 55.000 9.10 7.01 0.00 3.27
192 193 1.248101 TGCCTCATCGACGGTCAGAA 61.248 55.000 9.10 0.00 0.00 3.02
193 194 0.526524 GCCTCATCGACGGTCAGAAG 60.527 60.000 9.10 4.26 0.00 2.85
194 195 1.095600 CCTCATCGACGGTCAGAAGA 58.904 55.000 9.10 8.03 0.00 2.87
195 196 1.064803 CCTCATCGACGGTCAGAAGAG 59.935 57.143 18.98 18.98 33.49 2.85
196 197 1.740585 CTCATCGACGGTCAGAAGAGT 59.259 52.381 18.28 0.37 30.33 3.24
197 198 1.468914 TCATCGACGGTCAGAAGAGTG 59.531 52.381 9.10 2.80 0.00 3.51
198 199 0.811915 ATCGACGGTCAGAAGAGTGG 59.188 55.000 9.10 0.00 0.00 4.00
199 200 1.213013 CGACGGTCAGAAGAGTGGG 59.787 63.158 9.10 0.00 0.00 4.61
200 201 1.592223 GACGGTCAGAAGAGTGGGG 59.408 63.158 2.62 0.00 0.00 4.96
201 202 0.898789 GACGGTCAGAAGAGTGGGGA 60.899 60.000 2.62 0.00 0.00 4.81
202 203 0.471211 ACGGTCAGAAGAGTGGGGAA 60.471 55.000 0.00 0.00 0.00 3.97
203 204 0.037232 CGGTCAGAAGAGTGGGGAAC 60.037 60.000 0.00 0.00 0.00 3.62
218 219 1.905637 GGAACCATCCCTTTCGTTGT 58.094 50.000 0.00 0.00 40.10 3.32
219 220 2.235891 GGAACCATCCCTTTCGTTGTT 58.764 47.619 0.00 0.00 40.10 2.83
220 221 2.626266 GGAACCATCCCTTTCGTTGTTT 59.374 45.455 0.00 0.00 40.10 2.83
221 222 3.822167 GGAACCATCCCTTTCGTTGTTTA 59.178 43.478 0.00 0.00 40.10 2.01
222 223 4.082949 GGAACCATCCCTTTCGTTGTTTAG 60.083 45.833 0.00 0.00 40.10 1.85
223 224 3.418047 ACCATCCCTTTCGTTGTTTAGG 58.582 45.455 0.00 0.00 0.00 2.69
224 225 3.181437 ACCATCCCTTTCGTTGTTTAGGT 60.181 43.478 0.00 0.00 0.00 3.08
225 226 3.439129 CCATCCCTTTCGTTGTTTAGGTC 59.561 47.826 0.00 0.00 0.00 3.85
226 227 3.130280 TCCCTTTCGTTGTTTAGGTCC 57.870 47.619 0.00 0.00 0.00 4.46
227 228 2.707257 TCCCTTTCGTTGTTTAGGTCCT 59.293 45.455 0.00 0.00 0.00 3.85
228 229 3.136992 TCCCTTTCGTTGTTTAGGTCCTT 59.863 43.478 0.00 0.00 0.00 3.36
229 230 3.252458 CCCTTTCGTTGTTTAGGTCCTTG 59.748 47.826 0.00 0.00 0.00 3.61
230 231 3.881089 CCTTTCGTTGTTTAGGTCCTTGT 59.119 43.478 0.00 0.00 0.00 3.16
231 232 4.337274 CCTTTCGTTGTTTAGGTCCTTGTT 59.663 41.667 0.00 0.00 0.00 2.83
232 233 5.528320 CCTTTCGTTGTTTAGGTCCTTGTTA 59.472 40.000 0.00 0.00 0.00 2.41
233 234 6.206048 CCTTTCGTTGTTTAGGTCCTTGTTAT 59.794 38.462 0.00 0.00 0.00 1.89
234 235 6.790285 TTCGTTGTTTAGGTCCTTGTTATC 57.210 37.500 0.00 0.00 0.00 1.75
235 236 6.105397 TCGTTGTTTAGGTCCTTGTTATCT 57.895 37.500 0.00 0.00 0.00 1.98
236 237 6.527423 TCGTTGTTTAGGTCCTTGTTATCTT 58.473 36.000 0.00 0.00 0.00 2.40
237 238 6.993902 TCGTTGTTTAGGTCCTTGTTATCTTT 59.006 34.615 0.00 0.00 0.00 2.52
238 239 8.149647 TCGTTGTTTAGGTCCTTGTTATCTTTA 58.850 33.333 0.00 0.00 0.00 1.85
239 240 8.440833 CGTTGTTTAGGTCCTTGTTATCTTTAG 58.559 37.037 0.00 0.00 0.00 1.85
240 241 8.727910 GTTGTTTAGGTCCTTGTTATCTTTAGG 58.272 37.037 0.00 0.00 0.00 2.69
241 242 7.981142 TGTTTAGGTCCTTGTTATCTTTAGGT 58.019 34.615 0.00 0.00 0.00 3.08
242 243 8.098912 TGTTTAGGTCCTTGTTATCTTTAGGTC 58.901 37.037 0.00 0.00 0.00 3.85
243 244 8.319881 GTTTAGGTCCTTGTTATCTTTAGGTCT 58.680 37.037 0.00 0.00 0.00 3.85
244 245 6.954352 AGGTCCTTGTTATCTTTAGGTCTT 57.046 37.500 0.00 0.00 0.00 3.01
245 246 7.331089 AGGTCCTTGTTATCTTTAGGTCTTT 57.669 36.000 0.00 0.00 0.00 2.52
246 247 7.168905 AGGTCCTTGTTATCTTTAGGTCTTTG 58.831 38.462 0.00 0.00 0.00 2.77
247 248 6.940867 GGTCCTTGTTATCTTTAGGTCTTTGT 59.059 38.462 0.00 0.00 0.00 2.83
248 249 7.447545 GGTCCTTGTTATCTTTAGGTCTTTGTT 59.552 37.037 0.00 0.00 0.00 2.83
249 250 8.504815 GTCCTTGTTATCTTTAGGTCTTTGTTC 58.495 37.037 0.00 0.00 0.00 3.18
250 251 7.664318 TCCTTGTTATCTTTAGGTCTTTGTTCC 59.336 37.037 0.00 0.00 0.00 3.62
251 252 7.094334 CCTTGTTATCTTTAGGTCTTTGTTCCC 60.094 40.741 0.00 0.00 0.00 3.97
252 253 7.086685 TGTTATCTTTAGGTCTTTGTTCCCT 57.913 36.000 0.00 0.00 0.00 4.20
253 254 6.940298 TGTTATCTTTAGGTCTTTGTTCCCTG 59.060 38.462 0.00 0.00 0.00 4.45
254 255 4.367039 TCTTTAGGTCTTTGTTCCCTGG 57.633 45.455 0.00 0.00 0.00 4.45
255 256 3.720002 TCTTTAGGTCTTTGTTCCCTGGT 59.280 43.478 0.00 0.00 0.00 4.00
256 257 3.502123 TTAGGTCTTTGTTCCCTGGTG 57.498 47.619 0.00 0.00 0.00 4.17
257 258 0.478507 AGGTCTTTGTTCCCTGGTGG 59.521 55.000 0.00 0.00 0.00 4.61
258 259 1.179174 GGTCTTTGTTCCCTGGTGGC 61.179 60.000 0.00 0.00 0.00 5.01
259 260 0.467290 GTCTTTGTTCCCTGGTGGCA 60.467 55.000 0.00 0.00 0.00 4.92
260 261 0.482446 TCTTTGTTCCCTGGTGGCAT 59.518 50.000 0.00 0.00 0.00 4.40
261 262 0.890683 CTTTGTTCCCTGGTGGCATC 59.109 55.000 0.00 0.00 0.00 3.91
262 263 0.893270 TTTGTTCCCTGGTGGCATCG 60.893 55.000 0.00 0.00 0.00 3.84
263 264 1.773856 TTGTTCCCTGGTGGCATCGA 61.774 55.000 0.00 0.00 0.00 3.59
264 265 1.745489 GTTCCCTGGTGGCATCGAC 60.745 63.158 0.00 0.00 0.00 4.20
265 266 3.309436 TTCCCTGGTGGCATCGACG 62.309 63.158 0.00 0.00 0.00 5.12
266 267 3.770040 CCCTGGTGGCATCGACGA 61.770 66.667 0.00 0.00 0.00 4.20
267 268 2.501128 CCTGGTGGCATCGACGAT 59.499 61.111 4.05 4.05 0.00 3.73
268 269 1.884464 CCTGGTGGCATCGACGATG 60.884 63.158 29.22 29.22 42.37 3.84
269 270 1.141665 CTGGTGGCATCGACGATGA 59.858 57.895 35.61 17.21 42.09 2.92
270 271 0.249615 CTGGTGGCATCGACGATGAT 60.250 55.000 35.61 2.47 42.09 2.45
271 272 0.530431 TGGTGGCATCGACGATGATG 60.530 55.000 35.61 16.31 46.78 3.07
272 273 0.249447 GGTGGCATCGACGATGATGA 60.249 55.000 35.61 18.17 46.98 2.92
274 275 2.136649 GGCATCGACGATGATGACG 58.863 57.895 35.61 13.28 46.98 4.35
275 276 1.278172 GGCATCGACGATGATGACGG 61.278 60.000 35.61 12.59 46.98 4.79
276 277 1.880601 GCATCGACGATGATGACGGC 61.881 60.000 35.61 18.13 46.98 5.68
279 280 4.635925 GACGATGATGACGGCGAT 57.364 55.556 16.62 0.00 34.93 4.58
280 281 2.425278 GACGATGATGACGGCGATC 58.575 57.895 16.62 7.90 34.93 3.69
281 282 1.004277 GACGATGATGACGGCGATCC 61.004 60.000 16.62 2.46 34.93 3.36
293 294 2.418983 GGCGATCCGTTAGAGTAAGG 57.581 55.000 0.00 0.00 0.00 2.69
294 295 1.680207 GGCGATCCGTTAGAGTAAGGT 59.320 52.381 0.00 0.00 0.00 3.50
295 296 2.287487 GGCGATCCGTTAGAGTAAGGTC 60.287 54.545 0.00 0.00 0.00 3.85
296 297 2.601741 GCGATCCGTTAGAGTAAGGTCG 60.602 54.545 0.00 0.00 33.64 4.79
297 298 2.611292 CGATCCGTTAGAGTAAGGTCGT 59.389 50.000 0.00 0.00 0.00 4.34
298 299 3.064545 CGATCCGTTAGAGTAAGGTCGTT 59.935 47.826 0.00 0.00 0.00 3.85
299 300 4.437930 CGATCCGTTAGAGTAAGGTCGTTT 60.438 45.833 0.00 0.00 0.00 3.60
300 301 4.425577 TCCGTTAGAGTAAGGTCGTTTC 57.574 45.455 0.00 0.00 0.00 2.78
301 302 3.191371 TCCGTTAGAGTAAGGTCGTTTCC 59.809 47.826 0.00 0.00 0.00 3.13
302 303 3.192212 CCGTTAGAGTAAGGTCGTTTCCT 59.808 47.826 0.00 0.00 39.84 3.36
303 304 4.396166 CCGTTAGAGTAAGGTCGTTTCCTA 59.604 45.833 0.00 0.00 36.74 2.94
304 305 5.327891 CGTTAGAGTAAGGTCGTTTCCTAC 58.672 45.833 0.00 0.00 36.74 3.18
305 306 5.645624 GTTAGAGTAAGGTCGTTTCCTACC 58.354 45.833 0.00 0.00 36.74 3.18
311 312 2.322658 AGGTCGTTTCCTACCTTGACA 58.677 47.619 0.00 0.00 43.77 3.58
312 313 2.904434 AGGTCGTTTCCTACCTTGACAT 59.096 45.455 0.00 0.00 43.77 3.06
313 314 3.056035 AGGTCGTTTCCTACCTTGACATC 60.056 47.826 0.00 0.00 43.77 3.06
314 315 2.921754 GTCGTTTCCTACCTTGACATCG 59.078 50.000 0.00 0.00 0.00 3.84
315 316 2.094390 TCGTTTCCTACCTTGACATCGG 60.094 50.000 0.00 0.00 0.00 4.18
316 317 2.007608 GTTTCCTACCTTGACATCGGC 58.992 52.381 0.00 0.00 0.00 5.54
317 318 0.174845 TTCCTACCTTGACATCGGCG 59.825 55.000 0.00 0.00 0.00 6.46
318 319 1.227263 CCTACCTTGACATCGGCGG 60.227 63.158 7.21 0.00 0.00 6.13
319 320 1.883084 CTACCTTGACATCGGCGGC 60.883 63.158 7.21 0.00 0.00 6.53
320 321 2.572095 CTACCTTGACATCGGCGGCA 62.572 60.000 10.53 0.00 0.00 5.69
321 322 2.572095 TACCTTGACATCGGCGGCAG 62.572 60.000 10.53 0.00 0.00 4.85
322 323 3.869272 CTTGACATCGGCGGCAGC 61.869 66.667 10.53 0.00 44.18 5.25
336 337 2.361610 CAGCGGGGATGGTGCTTT 60.362 61.111 0.00 0.00 36.69 3.51
337 338 2.361610 AGCGGGGATGGTGCTTTG 60.362 61.111 0.00 0.00 34.80 2.77
338 339 3.451894 GCGGGGATGGTGCTTTGG 61.452 66.667 0.00 0.00 0.00 3.28
339 340 2.755469 CGGGGATGGTGCTTTGGG 60.755 66.667 0.00 0.00 0.00 4.12
340 341 2.770130 GGGGATGGTGCTTTGGGA 59.230 61.111 0.00 0.00 0.00 4.37
341 342 1.311059 GGGGATGGTGCTTTGGGAT 59.689 57.895 0.00 0.00 0.00 3.85
342 343 0.756815 GGGGATGGTGCTTTGGGATC 60.757 60.000 0.00 0.00 0.00 3.36
343 344 0.033208 GGGATGGTGCTTTGGGATCA 60.033 55.000 0.00 0.00 0.00 2.92
344 345 1.396653 GGATGGTGCTTTGGGATCAG 58.603 55.000 0.00 0.00 0.00 2.90
345 346 1.396653 GATGGTGCTTTGGGATCAGG 58.603 55.000 0.00 0.00 0.00 3.86
346 347 0.706433 ATGGTGCTTTGGGATCAGGT 59.294 50.000 0.00 0.00 0.00 4.00
347 348 0.038166 TGGTGCTTTGGGATCAGGTC 59.962 55.000 0.00 0.00 0.00 3.85
348 349 0.329596 GGTGCTTTGGGATCAGGTCT 59.670 55.000 0.00 0.00 0.00 3.85
349 350 1.680249 GGTGCTTTGGGATCAGGTCTC 60.680 57.143 0.00 0.00 0.00 3.36
350 351 1.280421 GTGCTTTGGGATCAGGTCTCT 59.720 52.381 0.00 0.00 0.00 3.10
351 352 1.556911 TGCTTTGGGATCAGGTCTCTC 59.443 52.381 0.00 0.00 0.00 3.20
352 353 1.134250 GCTTTGGGATCAGGTCTCTCC 60.134 57.143 0.00 0.00 0.00 3.71
356 357 2.003937 GGGATCAGGTCTCTCCCTAC 57.996 60.000 0.00 0.00 44.49 3.18
357 358 1.481615 GGGATCAGGTCTCTCCCTACC 60.482 61.905 0.00 0.00 44.49 3.18
359 360 2.090999 GGATCAGGTCTCTCCCTACCTT 60.091 54.545 0.00 0.00 43.77 3.50
360 361 3.140519 GGATCAGGTCTCTCCCTACCTTA 59.859 52.174 0.00 0.00 43.77 2.69
361 362 4.387664 GGATCAGGTCTCTCCCTACCTTAA 60.388 50.000 0.00 0.00 43.77 1.85
362 363 3.978610 TCAGGTCTCTCCCTACCTTAAC 58.021 50.000 0.00 0.00 43.77 2.01
363 364 2.688958 CAGGTCTCTCCCTACCTTAACG 59.311 54.545 0.00 0.00 43.77 3.18
364 365 2.579860 AGGTCTCTCCCTACCTTAACGA 59.420 50.000 0.00 0.00 43.77 3.85
365 366 3.204831 AGGTCTCTCCCTACCTTAACGAT 59.795 47.826 0.00 0.00 43.77 3.73
366 367 3.569277 GGTCTCTCCCTACCTTAACGATC 59.431 52.174 0.00 0.00 32.72 3.69
367 368 3.569277 GTCTCTCCCTACCTTAACGATCC 59.431 52.174 0.00 0.00 0.00 3.36
368 369 2.553172 CTCTCCCTACCTTAACGATCCG 59.447 54.545 0.00 0.00 0.00 4.18
369 370 2.092212 TCTCCCTACCTTAACGATCCGT 60.092 50.000 0.00 0.00 43.97 4.69
370 371 2.292845 CTCCCTACCTTAACGATCCGTC 59.707 54.545 0.00 0.00 39.99 4.79
371 372 2.026641 CCCTACCTTAACGATCCGTCA 58.973 52.381 0.00 0.00 39.99 4.35
372 373 2.626743 CCCTACCTTAACGATCCGTCAT 59.373 50.000 0.00 0.00 39.99 3.06
373 374 3.305199 CCCTACCTTAACGATCCGTCATC 60.305 52.174 0.00 0.00 39.99 2.92
374 375 3.317149 CCTACCTTAACGATCCGTCATCA 59.683 47.826 0.00 0.00 39.99 3.07
375 376 3.880047 ACCTTAACGATCCGTCATCAA 57.120 42.857 0.00 0.00 39.99 2.57
376 377 3.518590 ACCTTAACGATCCGTCATCAAC 58.481 45.455 0.00 0.00 39.99 3.18
377 378 3.056393 ACCTTAACGATCCGTCATCAACA 60.056 43.478 0.00 0.00 39.99 3.33
378 379 3.930229 CCTTAACGATCCGTCATCAACAA 59.070 43.478 0.00 0.00 39.99 2.83
379 380 4.390603 CCTTAACGATCCGTCATCAACAAA 59.609 41.667 0.00 0.00 39.99 2.83
380 381 5.445939 CCTTAACGATCCGTCATCAACAAAG 60.446 44.000 0.00 0.00 39.99 2.77
381 382 2.346803 ACGATCCGTCATCAACAAAGG 58.653 47.619 0.00 0.00 33.69 3.11
382 383 1.665679 CGATCCGTCATCAACAAAGGG 59.334 52.381 0.00 0.00 0.00 3.95
383 384 1.401905 GATCCGTCATCAACAAAGGGC 59.598 52.381 0.00 0.00 0.00 5.19
384 385 0.608035 TCCGTCATCAACAAAGGGCC 60.608 55.000 0.00 0.00 0.00 5.80
385 386 1.501741 CGTCATCAACAAAGGGCCG 59.498 57.895 0.00 0.00 0.00 6.13
386 387 1.212751 GTCATCAACAAAGGGCCGC 59.787 57.895 0.00 0.00 0.00 6.53
387 388 2.179018 CATCAACAAAGGGCCGCG 59.821 61.111 0.00 0.00 0.00 6.46
388 389 2.033448 ATCAACAAAGGGCCGCGA 59.967 55.556 8.23 0.00 0.00 5.87
389 390 1.602323 ATCAACAAAGGGCCGCGAA 60.602 52.632 8.23 0.00 0.00 4.70
390 391 1.586154 ATCAACAAAGGGCCGCGAAG 61.586 55.000 8.23 0.00 0.00 3.79
391 392 2.112297 AACAAAGGGCCGCGAAGA 59.888 55.556 8.23 0.00 0.00 2.87
392 393 1.303317 AACAAAGGGCCGCGAAGAT 60.303 52.632 8.23 0.00 0.00 2.40
393 394 0.035820 AACAAAGGGCCGCGAAGATA 60.036 50.000 8.23 0.00 0.00 1.98
394 395 0.462047 ACAAAGGGCCGCGAAGATAG 60.462 55.000 8.23 0.00 0.00 2.08
395 396 1.146263 AAAGGGCCGCGAAGATAGG 59.854 57.895 8.23 0.00 0.00 2.57
396 397 1.623542 AAAGGGCCGCGAAGATAGGT 61.624 55.000 8.23 0.00 0.00 3.08
397 398 2.280186 GGGCCGCGAAGATAGGTG 60.280 66.667 8.23 0.00 0.00 4.00
398 399 2.967615 GGCCGCGAAGATAGGTGC 60.968 66.667 8.23 0.00 0.00 5.01
399 400 2.202878 GCCGCGAAGATAGGTGCA 60.203 61.111 8.23 0.00 0.00 4.57
400 401 2.240500 GCCGCGAAGATAGGTGCAG 61.241 63.158 8.23 0.00 0.00 4.41
401 402 1.437573 CCGCGAAGATAGGTGCAGA 59.562 57.895 8.23 0.00 0.00 4.26
402 403 0.596083 CCGCGAAGATAGGTGCAGAG 60.596 60.000 8.23 0.00 0.00 3.35
403 404 0.101399 CGCGAAGATAGGTGCAGAGT 59.899 55.000 0.00 0.00 0.00 3.24
404 405 1.565305 GCGAAGATAGGTGCAGAGTG 58.435 55.000 0.00 0.00 0.00 3.51
405 406 1.804372 GCGAAGATAGGTGCAGAGTGG 60.804 57.143 0.00 0.00 0.00 4.00
406 407 1.751351 CGAAGATAGGTGCAGAGTGGA 59.249 52.381 0.00 0.00 0.00 4.02
407 408 2.363680 CGAAGATAGGTGCAGAGTGGAT 59.636 50.000 0.00 0.00 0.00 3.41
408 409 3.726607 GAAGATAGGTGCAGAGTGGATG 58.273 50.000 0.00 0.00 0.00 3.51
409 410 1.415659 AGATAGGTGCAGAGTGGATGC 59.584 52.381 0.00 0.00 44.11 3.91
410 411 0.471617 ATAGGTGCAGAGTGGATGCC 59.528 55.000 0.00 0.00 43.18 4.40
411 412 0.618680 TAGGTGCAGAGTGGATGCCT 60.619 55.000 0.00 0.00 43.18 4.75
412 413 0.618680 AGGTGCAGAGTGGATGCCTA 60.619 55.000 0.00 0.00 43.18 3.93
413 414 0.179062 GGTGCAGAGTGGATGCCTAG 60.179 60.000 0.00 0.00 43.18 3.02
414 415 0.539051 GTGCAGAGTGGATGCCTAGT 59.461 55.000 0.00 0.00 43.18 2.57
415 416 1.757118 GTGCAGAGTGGATGCCTAGTA 59.243 52.381 0.00 0.00 43.18 1.82
416 417 2.366916 GTGCAGAGTGGATGCCTAGTAT 59.633 50.000 0.00 0.00 43.18 2.12
417 418 3.574396 GTGCAGAGTGGATGCCTAGTATA 59.426 47.826 0.00 0.00 43.18 1.47
418 419 4.221703 GTGCAGAGTGGATGCCTAGTATAT 59.778 45.833 0.00 0.00 43.18 0.86
419 420 4.464244 TGCAGAGTGGATGCCTAGTATATC 59.536 45.833 0.00 0.00 43.18 1.63
420 421 4.464244 GCAGAGTGGATGCCTAGTATATCA 59.536 45.833 0.00 0.00 37.73 2.15
421 422 5.128499 GCAGAGTGGATGCCTAGTATATCAT 59.872 44.000 0.00 0.00 37.73 2.45
422 423 6.682611 GCAGAGTGGATGCCTAGTATATCATC 60.683 46.154 0.00 0.00 37.73 2.92
423 424 6.379417 CAGAGTGGATGCCTAGTATATCATCA 59.621 42.308 0.00 0.00 37.61 3.07
424 425 6.956435 AGAGTGGATGCCTAGTATATCATCAA 59.044 38.462 0.00 0.00 37.61 2.57
425 426 7.123997 AGAGTGGATGCCTAGTATATCATCAAG 59.876 40.741 0.00 0.00 37.61 3.02
426 427 6.956435 AGTGGATGCCTAGTATATCATCAAGA 59.044 38.462 0.00 0.00 37.61 3.02
427 428 7.038659 GTGGATGCCTAGTATATCATCAAGAC 58.961 42.308 0.00 0.00 37.61 3.01
428 429 6.155221 TGGATGCCTAGTATATCATCAAGACC 59.845 42.308 0.00 0.00 37.61 3.85
429 430 6.155221 GGATGCCTAGTATATCATCAAGACCA 59.845 42.308 0.00 0.00 37.61 4.02
430 431 7.147585 GGATGCCTAGTATATCATCAAGACCAT 60.148 40.741 0.00 0.00 37.61 3.55
431 432 8.844865 ATGCCTAGTATATCATCAAGACCATA 57.155 34.615 0.00 0.00 0.00 2.74
432 433 8.664669 TGCCTAGTATATCATCAAGACCATAA 57.335 34.615 0.00 0.00 0.00 1.90
433 434 9.100197 TGCCTAGTATATCATCAAGACCATAAA 57.900 33.333 0.00 0.00 0.00 1.40
434 435 9.593134 GCCTAGTATATCATCAAGACCATAAAG 57.407 37.037 0.00 0.00 0.00 1.85
438 439 8.861086 AGTATATCATCAAGACCATAAAGACGT 58.139 33.333 0.00 0.00 0.00 4.34
457 458 4.969816 ACGTAGTGCACATTATTTTCAGC 58.030 39.130 21.04 0.00 42.51 4.26
458 459 4.695455 ACGTAGTGCACATTATTTTCAGCT 59.305 37.500 21.04 0.00 42.51 4.24
459 460 5.023920 CGTAGTGCACATTATTTTCAGCTG 58.976 41.667 21.04 7.63 0.00 4.24
460 461 3.841643 AGTGCACATTATTTTCAGCTGC 58.158 40.909 21.04 0.00 0.00 5.25
461 462 2.925563 GTGCACATTATTTTCAGCTGCC 59.074 45.455 13.17 0.00 0.00 4.85
462 463 2.561858 TGCACATTATTTTCAGCTGCCA 59.438 40.909 9.47 0.00 0.00 4.92
463 464 3.006644 TGCACATTATTTTCAGCTGCCAA 59.993 39.130 9.47 4.20 0.00 4.52
464 465 3.995705 GCACATTATTTTCAGCTGCCAAA 59.004 39.130 9.47 10.96 0.00 3.28
465 466 4.092383 GCACATTATTTTCAGCTGCCAAAG 59.908 41.667 9.47 1.81 0.00 2.77
466 467 4.628333 CACATTATTTTCAGCTGCCAAAGG 59.372 41.667 9.47 3.28 0.00 3.11
467 468 3.959535 TTATTTTCAGCTGCCAAAGGG 57.040 42.857 9.47 0.00 37.18 3.95
468 469 1.720781 ATTTTCAGCTGCCAAAGGGT 58.279 45.000 9.47 0.00 36.17 4.34
469 470 0.752054 TTTTCAGCTGCCAAAGGGTG 59.248 50.000 9.47 0.00 36.17 4.61
470 471 0.106268 TTTCAGCTGCCAAAGGGTGA 60.106 50.000 9.47 0.00 38.03 4.02
471 472 0.106268 TTCAGCTGCCAAAGGGTGAA 60.106 50.000 9.47 0.00 44.20 3.18
472 473 0.538057 TCAGCTGCCAAAGGGTGAAG 60.538 55.000 9.47 0.00 37.09 3.02
473 474 1.228675 AGCTGCCAAAGGGTGAAGG 60.229 57.895 0.00 0.00 36.17 3.46
474 475 1.228552 GCTGCCAAAGGGTGAAGGA 60.229 57.895 0.00 0.00 36.17 3.36
475 476 0.827507 GCTGCCAAAGGGTGAAGGAA 60.828 55.000 0.00 0.00 36.17 3.36
476 477 1.251251 CTGCCAAAGGGTGAAGGAAG 58.749 55.000 0.00 0.00 36.17 3.46
477 478 0.555769 TGCCAAAGGGTGAAGGAAGT 59.444 50.000 0.00 0.00 36.17 3.01
478 479 0.961753 GCCAAAGGGTGAAGGAAGTG 59.038 55.000 0.00 0.00 36.17 3.16
479 480 1.754201 GCCAAAGGGTGAAGGAAGTGT 60.754 52.381 0.00 0.00 36.17 3.55
480 481 1.956477 CCAAAGGGTGAAGGAAGTGTG 59.044 52.381 0.00 0.00 0.00 3.82
481 482 1.956477 CAAAGGGTGAAGGAAGTGTGG 59.044 52.381 0.00 0.00 0.00 4.17
482 483 1.518367 AAGGGTGAAGGAAGTGTGGA 58.482 50.000 0.00 0.00 0.00 4.02
483 484 1.059913 AGGGTGAAGGAAGTGTGGAG 58.940 55.000 0.00 0.00 0.00 3.86
484 485 0.036875 GGGTGAAGGAAGTGTGGAGG 59.963 60.000 0.00 0.00 0.00 4.30
485 486 0.036875 GGTGAAGGAAGTGTGGAGGG 59.963 60.000 0.00 0.00 0.00 4.30
486 487 0.765510 GTGAAGGAAGTGTGGAGGGT 59.234 55.000 0.00 0.00 0.00 4.34
487 488 1.056660 TGAAGGAAGTGTGGAGGGTC 58.943 55.000 0.00 0.00 0.00 4.46
488 489 1.353091 GAAGGAAGTGTGGAGGGTCT 58.647 55.000 0.00 0.00 0.00 3.85
489 490 1.700186 GAAGGAAGTGTGGAGGGTCTT 59.300 52.381 0.00 0.00 0.00 3.01
490 491 1.059913 AGGAAGTGTGGAGGGTCTTG 58.940 55.000 0.00 0.00 0.00 3.02
491 492 0.036875 GGAAGTGTGGAGGGTCTTGG 59.963 60.000 0.00 0.00 0.00 3.61
492 493 0.036875 GAAGTGTGGAGGGTCTTGGG 59.963 60.000 0.00 0.00 0.00 4.12
493 494 2.034221 GTGTGGAGGGTCTTGGGC 59.966 66.667 0.00 0.00 0.00 5.36
494 495 2.121963 TGTGGAGGGTCTTGGGCT 60.122 61.111 0.00 0.00 0.00 5.19
495 496 1.159905 TGTGGAGGGTCTTGGGCTA 59.840 57.895 0.00 0.00 0.00 3.93
496 497 0.474854 TGTGGAGGGTCTTGGGCTAA 60.475 55.000 0.00 0.00 0.00 3.09
497 498 0.035343 GTGGAGGGTCTTGGGCTAAC 60.035 60.000 0.00 0.00 0.00 2.34
498 499 1.205460 TGGAGGGTCTTGGGCTAACC 61.205 60.000 0.00 0.00 40.81 2.85
499 500 0.914902 GGAGGGTCTTGGGCTAACCT 60.915 60.000 0.00 0.00 41.11 3.50
500 501 0.542333 GAGGGTCTTGGGCTAACCTC 59.458 60.000 3.53 3.53 41.11 3.85
501 502 1.221021 GGGTCTTGGGCTAACCTCG 59.779 63.158 0.00 0.00 41.11 4.63
502 503 1.262640 GGGTCTTGGGCTAACCTCGA 61.263 60.000 0.00 0.00 41.11 4.04
503 504 0.831307 GGTCTTGGGCTAACCTCGAT 59.169 55.000 0.00 0.00 41.11 3.59
504 505 1.202545 GGTCTTGGGCTAACCTCGATC 60.203 57.143 0.00 0.00 41.11 3.69
505 506 1.480954 GTCTTGGGCTAACCTCGATCA 59.519 52.381 0.00 0.00 41.11 2.92
506 507 2.103263 GTCTTGGGCTAACCTCGATCAT 59.897 50.000 0.00 0.00 41.11 2.45
507 508 2.103094 TCTTGGGCTAACCTCGATCATG 59.897 50.000 0.00 0.00 41.11 3.07
508 509 0.758734 TGGGCTAACCTCGATCATGG 59.241 55.000 0.00 0.00 41.11 3.66
509 510 0.603975 GGGCTAACCTCGATCATGGC 60.604 60.000 0.00 0.00 35.85 4.40
510 511 0.394565 GGCTAACCTCGATCATGGCT 59.605 55.000 0.00 0.00 0.00 4.75
511 512 1.506493 GCTAACCTCGATCATGGCTG 58.494 55.000 0.00 0.00 0.00 4.85
512 513 1.069204 GCTAACCTCGATCATGGCTGA 59.931 52.381 0.00 0.00 35.41 4.26
513 514 2.865670 GCTAACCTCGATCATGGCTGAG 60.866 54.545 0.00 0.00 34.12 3.35
515 516 2.131405 CCTCGATCATGGCTGAGGT 58.869 57.895 15.67 0.00 42.45 3.85
516 517 1.332195 CCTCGATCATGGCTGAGGTA 58.668 55.000 15.67 0.00 42.45 3.08
517 518 1.271934 CCTCGATCATGGCTGAGGTAG 59.728 57.143 15.67 0.00 42.45 3.18
537 538 1.757682 CTCGAGCTGGGTACTCTCTT 58.242 55.000 0.00 0.00 31.71 2.85
544 545 0.679002 TGGGTACTCTCTTCGTCCGG 60.679 60.000 0.00 0.00 0.00 5.14
550 551 4.277921 GGTACTCTCTTCGTCCGGAATTAT 59.722 45.833 5.23 0.00 33.26 1.28
555 556 5.107133 TCTCTTCGTCCGGAATTATTTGTC 58.893 41.667 5.23 0.00 33.26 3.18
557 558 2.542597 TCGTCCGGAATTATTTGTCGG 58.457 47.619 5.23 8.30 41.80 4.79
563 564 4.632688 TCCGGAATTATTTGTCGGAGAAAC 59.367 41.667 0.00 0.00 43.84 2.78
564 565 4.493545 CCGGAATTATTTGTCGGAGAAACG 60.494 45.833 0.00 1.43 42.94 3.60
567 568 5.446875 GGAATTATTTGTCGGAGAAACGGAC 60.447 44.000 2.11 0.00 45.14 4.79
606 608 5.591099 CATCCGTTCAAAAGGGGAATTATG 58.409 41.667 0.00 0.00 37.06 1.90
618 620 2.955660 GGGAATTATGGATCGGTTGCAA 59.044 45.455 0.00 0.00 0.00 4.08
652 654 5.398416 GCCTACACTTTTGAACGAACAATTC 59.602 40.000 0.00 0.00 0.00 2.17
687 691 0.375106 GCTCGTGGAAATGTGCTAGC 59.625 55.000 8.10 8.10 0.00 3.42
688 692 1.725641 CTCGTGGAAATGTGCTAGCA 58.274 50.000 14.93 14.93 0.00 3.49
689 693 1.662629 CTCGTGGAAATGTGCTAGCAG 59.337 52.381 20.03 2.76 0.00 4.24
690 694 0.097674 CGTGGAAATGTGCTAGCAGC 59.902 55.000 20.03 13.62 42.82 5.25
691 695 1.457346 GTGGAAATGTGCTAGCAGCT 58.543 50.000 20.03 5.27 42.97 4.24
692 696 2.632377 GTGGAAATGTGCTAGCAGCTA 58.368 47.619 20.03 8.25 42.97 3.32
693 697 2.611292 GTGGAAATGTGCTAGCAGCTAG 59.389 50.000 23.40 23.40 42.97 3.42
698 702 0.614697 TGTGCTAGCAGCTAGTGGGA 60.615 55.000 27.00 9.32 42.97 4.37
736 745 2.114616 CTGAAGTGCACCCCTATCTCT 58.885 52.381 14.63 0.00 0.00 3.10
775 784 5.417811 TGCAAATCAAAGCAAAGTTCAGAA 58.582 33.333 0.00 0.00 37.90 3.02
826 855 0.108424 GGAAGCTGCTCTCACACGAT 60.108 55.000 1.00 0.00 0.00 3.73
945 992 2.248248 ACAGAGACCATGAACCTTCGA 58.752 47.619 0.00 0.00 0.00 3.71
951 998 1.635663 CCATGAACCTTCGACCGCAC 61.636 60.000 0.00 0.00 0.00 5.34
1936 2018 4.510167 AGCCTGTGAGCTGGTATTAATT 57.490 40.909 0.00 0.00 42.95 1.40
1937 2019 5.630415 AGCCTGTGAGCTGGTATTAATTA 57.370 39.130 0.00 0.00 42.95 1.40
1938 2020 6.001449 AGCCTGTGAGCTGGTATTAATTAA 57.999 37.500 0.00 0.00 42.95 1.40
2029 2111 7.377766 TGATACTGAGCAAAGACAAATAACC 57.622 36.000 0.00 0.00 0.00 2.85
2050 2132 4.119862 CCGGACAGAAATGTACTGTATGG 58.880 47.826 0.00 0.00 46.57 2.74
2060 2142 7.705325 AGAAATGTACTGTATGGTCGTATTCAC 59.295 37.037 0.00 0.00 0.00 3.18
2066 2148 3.452990 TGTATGGTCGTATTCACCACCAT 59.547 43.478 11.06 11.06 46.90 3.55
2095 2177 3.548745 TTCCTCTATCACAGTGCATGG 57.451 47.619 0.00 0.00 0.00 3.66
2195 2277 2.541547 CTTGCGGAAGATGGGGCTCA 62.542 60.000 11.79 0.00 0.00 4.26
2208 2290 1.557269 GGGCTCATGGGCGGATAGAT 61.557 60.000 12.39 0.00 41.87 1.98
2210 2292 0.107945 GCTCATGGGCGGATAGATCC 60.108 60.000 0.00 0.00 43.65 3.36
2241 2323 1.508667 ATTGTGGTGATGGGGGAGCA 61.509 55.000 0.00 0.00 0.00 4.26
2242 2324 1.724148 TTGTGGTGATGGGGGAGCAA 61.724 55.000 0.00 0.00 0.00 3.91
2301 2383 7.523709 GCAACAAGATCACCCTTCAAATTTCTA 60.524 37.037 0.00 0.00 0.00 2.10
2408 2494 3.118738 ACCTTCATCCTCGTGTATGTTCC 60.119 47.826 0.00 0.00 0.00 3.62
2448 2534 4.675146 GCGTCATGTTGCAATTATTCTGGT 60.675 41.667 0.59 0.00 0.00 4.00
2500 2586 4.331717 AGTTTTTAGTGTTGTCGACCTGTG 59.668 41.667 14.12 0.00 0.00 3.66
2509 2595 2.687370 TGTCGACCTGTGATTGATGTG 58.313 47.619 14.12 0.00 0.00 3.21
2513 2599 2.359900 GACCTGTGATTGATGTGGGTC 58.640 52.381 0.00 0.00 35.67 4.46
2522 2608 4.018506 TGATTGATGTGGGTCCTATGTTGT 60.019 41.667 0.00 0.00 0.00 3.32
2566 2652 0.821301 TGGTTTGCTGCGATCAACCA 60.821 50.000 16.81 16.81 0.00 3.67
2686 2772 9.220767 GTTGATGTTCCATAAGTAGAAGAAACT 57.779 33.333 0.00 0.00 0.00 2.66
2689 2775 7.435068 TGTTCCATAAGTAGAAGAAACTTGC 57.565 36.000 0.00 0.00 37.71 4.01
2694 2780 6.094603 CCATAAGTAGAAGAAACTTGCTGCAT 59.905 38.462 1.84 0.00 37.71 3.96
2710 2796 2.303022 CTGCATTATGGATAGACGGGGT 59.697 50.000 0.00 0.00 0.00 4.95
2749 2838 7.007546 CGAACGTCTATTGTCTAGTCTTCTTTG 59.992 40.741 0.00 0.00 0.00 2.77
2837 2926 6.500910 ACCGTTTTAAAAGGCTCAACTTTAG 58.499 36.000 13.85 1.25 39.63 1.85
2921 3010 5.121142 CACACCTTAAATACACACTTACGGG 59.879 44.000 0.00 0.00 0.00 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.759059 ACATTCCCATAGAGAAAAGATGCA 58.241 37.500 0.00 0.00 0.00 3.96
1 2 6.501781 CAACATTCCCATAGAGAAAAGATGC 58.498 40.000 0.00 0.00 0.00 3.91
2 3 6.501781 GCAACATTCCCATAGAGAAAAGATG 58.498 40.000 0.00 0.00 0.00 2.90
3 4 5.297776 CGCAACATTCCCATAGAGAAAAGAT 59.702 40.000 0.00 0.00 0.00 2.40
4 5 4.635765 CGCAACATTCCCATAGAGAAAAGA 59.364 41.667 0.00 0.00 0.00 2.52
5 6 4.635765 TCGCAACATTCCCATAGAGAAAAG 59.364 41.667 0.00 0.00 0.00 2.27
6 7 4.584874 TCGCAACATTCCCATAGAGAAAA 58.415 39.130 0.00 0.00 0.00 2.29
7 8 4.214986 TCGCAACATTCCCATAGAGAAA 57.785 40.909 0.00 0.00 0.00 2.52
8 9 3.904800 TCGCAACATTCCCATAGAGAA 57.095 42.857 0.00 0.00 0.00 2.87
9 10 3.531538 GTTCGCAACATTCCCATAGAGA 58.468 45.455 0.00 0.00 0.00 3.10
10 11 2.614057 GGTTCGCAACATTCCCATAGAG 59.386 50.000 2.28 0.00 0.00 2.43
11 12 2.639065 GGTTCGCAACATTCCCATAGA 58.361 47.619 2.28 0.00 0.00 1.98
12 13 1.676006 GGGTTCGCAACATTCCCATAG 59.324 52.381 0.00 0.00 38.15 2.23
13 14 1.283613 AGGGTTCGCAACATTCCCATA 59.716 47.619 0.00 0.00 40.48 2.74
14 15 0.039618 AGGGTTCGCAACATTCCCAT 59.960 50.000 0.00 0.00 40.48 4.00
15 16 0.693622 TAGGGTTCGCAACATTCCCA 59.306 50.000 0.00 0.00 40.48 4.37
16 17 1.471287 GTTAGGGTTCGCAACATTCCC 59.529 52.381 0.00 0.00 38.50 3.97
17 18 1.471287 GGTTAGGGTTCGCAACATTCC 59.529 52.381 2.28 0.00 0.00 3.01
18 19 1.471287 GGGTTAGGGTTCGCAACATTC 59.529 52.381 2.28 0.00 0.00 2.67
19 20 1.202952 TGGGTTAGGGTTCGCAACATT 60.203 47.619 2.28 0.00 0.00 2.71
20 21 0.402504 TGGGTTAGGGTTCGCAACAT 59.597 50.000 2.28 0.00 0.00 2.71
21 22 0.402504 ATGGGTTAGGGTTCGCAACA 59.597 50.000 2.28 0.00 0.00 3.33
22 23 0.808755 CATGGGTTAGGGTTCGCAAC 59.191 55.000 0.00 0.00 0.00 4.17
23 24 0.322997 CCATGGGTTAGGGTTCGCAA 60.323 55.000 2.85 0.00 0.00 4.85
24 25 1.202099 TCCATGGGTTAGGGTTCGCA 61.202 55.000 13.02 0.00 0.00 5.10
25 26 0.034863 TTCCATGGGTTAGGGTTCGC 60.035 55.000 13.02 0.00 0.00 4.70
26 27 2.729028 ATTCCATGGGTTAGGGTTCG 57.271 50.000 13.02 0.00 0.00 3.95
27 28 9.816787 TTAATATAATTCCATGGGTTAGGGTTC 57.183 33.333 13.02 0.00 0.00 3.62
71 72 5.650283 TGAGGGGTCCATACATTTCTTTTT 58.350 37.500 0.00 0.00 0.00 1.94
72 73 5.269554 TGAGGGGTCCATACATTTCTTTT 57.730 39.130 0.00 0.00 0.00 2.27
73 74 4.946160 TGAGGGGTCCATACATTTCTTT 57.054 40.909 0.00 0.00 0.00 2.52
74 75 4.600062 GTTGAGGGGTCCATACATTTCTT 58.400 43.478 0.00 0.00 0.00 2.52
75 76 3.370527 CGTTGAGGGGTCCATACATTTCT 60.371 47.826 0.00 0.00 0.00 2.52
76 77 2.943033 CGTTGAGGGGTCCATACATTTC 59.057 50.000 0.00 0.00 0.00 2.17
77 78 2.356741 CCGTTGAGGGGTCCATACATTT 60.357 50.000 0.00 0.00 35.97 2.32
78 79 1.211949 CCGTTGAGGGGTCCATACATT 59.788 52.381 0.00 0.00 35.97 2.71
79 80 0.837272 CCGTTGAGGGGTCCATACAT 59.163 55.000 0.00 0.00 35.97 2.29
80 81 1.906105 GCCGTTGAGGGGTCCATACA 61.906 60.000 0.00 0.00 41.48 2.29
81 82 1.153229 GCCGTTGAGGGGTCCATAC 60.153 63.158 0.00 0.00 41.48 2.39
82 83 2.372074 GGCCGTTGAGGGGTCCATA 61.372 63.158 0.00 0.00 41.48 2.74
83 84 3.728373 GGCCGTTGAGGGGTCCAT 61.728 66.667 0.00 0.00 41.48 3.41
89 90 3.938637 GAAAGGGGGCCGTTGAGGG 62.939 68.421 0.00 0.00 41.48 4.30
90 91 2.361230 GAAAGGGGGCCGTTGAGG 60.361 66.667 0.00 0.00 44.97 3.86
91 92 1.377333 GAGAAAGGGGGCCGTTGAG 60.377 63.158 0.00 0.00 0.00 3.02
92 93 2.754375 GAGAAAGGGGGCCGTTGA 59.246 61.111 0.00 0.00 0.00 3.18
93 94 2.746277 CGAGAAAGGGGGCCGTTG 60.746 66.667 0.00 0.00 0.00 4.10
94 95 2.926242 TCGAGAAAGGGGGCCGTT 60.926 61.111 0.00 0.00 0.00 4.44
95 96 3.703127 GTCGAGAAAGGGGGCCGT 61.703 66.667 0.00 0.00 0.00 5.68
96 97 4.468689 GGTCGAGAAAGGGGGCCG 62.469 72.222 0.00 0.00 0.00 6.13
97 98 1.687297 CTAGGTCGAGAAAGGGGGCC 61.687 65.000 0.00 0.00 0.00 5.80
98 99 0.976590 ACTAGGTCGAGAAAGGGGGC 60.977 60.000 0.00 0.00 0.00 5.80
99 100 2.308690 CTACTAGGTCGAGAAAGGGGG 58.691 57.143 0.00 0.00 0.00 5.40
100 101 2.688958 CACTACTAGGTCGAGAAAGGGG 59.311 54.545 0.00 0.00 0.00 4.79
101 102 2.688958 CCACTACTAGGTCGAGAAAGGG 59.311 54.545 0.00 0.00 0.00 3.95
102 103 2.099427 GCCACTACTAGGTCGAGAAAGG 59.901 54.545 0.00 0.00 0.00 3.11
103 104 3.018149 AGCCACTACTAGGTCGAGAAAG 58.982 50.000 0.00 0.00 0.00 2.62
104 105 3.083122 AGCCACTACTAGGTCGAGAAA 57.917 47.619 0.00 0.00 0.00 2.52
105 106 2.803030 AGCCACTACTAGGTCGAGAA 57.197 50.000 0.00 0.00 0.00 2.87
106 107 3.433314 CCTTAGCCACTACTAGGTCGAGA 60.433 52.174 0.00 0.00 0.00 4.04
107 108 2.879646 CCTTAGCCACTACTAGGTCGAG 59.120 54.545 0.00 0.00 0.00 4.04
108 109 2.240667 ACCTTAGCCACTACTAGGTCGA 59.759 50.000 0.00 0.00 0.00 4.20
109 110 2.617774 GACCTTAGCCACTACTAGGTCG 59.382 54.545 8.87 0.00 34.12 4.79
110 111 3.884693 GAGACCTTAGCCACTACTAGGTC 59.115 52.174 13.94 13.94 38.90 3.85
111 112 3.372892 GGAGACCTTAGCCACTACTAGGT 60.373 52.174 0.00 0.00 0.00 3.08
112 113 3.224269 GGAGACCTTAGCCACTACTAGG 58.776 54.545 0.00 0.00 0.00 3.02
113 114 3.899726 TGGAGACCTTAGCCACTACTAG 58.100 50.000 0.00 0.00 0.00 2.57
114 115 4.215908 CATGGAGACCTTAGCCACTACTA 58.784 47.826 0.00 0.00 33.93 1.82
115 116 2.921834 TGGAGACCTTAGCCACTACT 57.078 50.000 0.00 0.00 0.00 2.57
116 117 2.766828 ACATGGAGACCTTAGCCACTAC 59.233 50.000 0.00 0.00 33.93 2.73
117 118 3.116096 ACATGGAGACCTTAGCCACTA 57.884 47.619 0.00 0.00 33.93 2.74
118 119 1.958288 ACATGGAGACCTTAGCCACT 58.042 50.000 0.00 0.00 33.93 4.00
119 120 2.359900 CAACATGGAGACCTTAGCCAC 58.640 52.381 0.00 0.00 33.93 5.01
120 121 1.340017 GCAACATGGAGACCTTAGCCA 60.340 52.381 0.00 0.00 35.91 4.75
121 122 1.383523 GCAACATGGAGACCTTAGCC 58.616 55.000 0.00 0.00 0.00 3.93
122 123 1.383523 GGCAACATGGAGACCTTAGC 58.616 55.000 0.00 0.00 0.00 3.09
123 124 1.656652 CGGCAACATGGAGACCTTAG 58.343 55.000 0.00 0.00 0.00 2.18
124 125 0.392461 GCGGCAACATGGAGACCTTA 60.392 55.000 0.00 0.00 0.00 2.69
125 126 1.675641 GCGGCAACATGGAGACCTT 60.676 57.895 0.00 0.00 0.00 3.50
126 127 2.045926 GCGGCAACATGGAGACCT 60.046 61.111 0.00 0.00 0.00 3.85
127 128 3.134127 GGCGGCAACATGGAGACC 61.134 66.667 3.07 0.00 0.00 3.85
128 129 2.045926 AGGCGGCAACATGGAGAC 60.046 61.111 13.08 0.00 0.00 3.36
129 130 2.268920 GAGGCGGCAACATGGAGA 59.731 61.111 13.08 0.00 0.00 3.71
130 131 3.197790 CGAGGCGGCAACATGGAG 61.198 66.667 13.08 0.00 0.00 3.86
131 132 4.776322 CCGAGGCGGCAACATGGA 62.776 66.667 13.08 0.00 41.17 3.41
141 142 1.472662 ATAGGAATGGGACCGAGGCG 61.473 60.000 0.00 0.00 0.00 5.52
142 143 0.321996 GATAGGAATGGGACCGAGGC 59.678 60.000 0.00 0.00 0.00 4.70
143 144 0.977395 GGATAGGAATGGGACCGAGG 59.023 60.000 0.00 0.00 0.00 4.63
144 145 0.977395 GGGATAGGAATGGGACCGAG 59.023 60.000 0.00 0.00 0.00 4.63
145 146 0.566176 AGGGATAGGAATGGGACCGA 59.434 55.000 0.00 0.00 0.00 4.69
146 147 1.072331 CAAGGGATAGGAATGGGACCG 59.928 57.143 0.00 0.00 0.00 4.79
147 148 2.106684 GTCAAGGGATAGGAATGGGACC 59.893 54.545 0.00 0.00 0.00 4.46
148 149 2.106684 GGTCAAGGGATAGGAATGGGAC 59.893 54.545 0.00 0.00 0.00 4.46
149 150 2.294195 TGGTCAAGGGATAGGAATGGGA 60.294 50.000 0.00 0.00 0.00 4.37
150 151 2.107204 CTGGTCAAGGGATAGGAATGGG 59.893 54.545 0.00 0.00 0.00 4.00
151 152 2.780010 ACTGGTCAAGGGATAGGAATGG 59.220 50.000 0.00 0.00 0.00 3.16
152 153 4.202441 CAACTGGTCAAGGGATAGGAATG 58.798 47.826 0.00 0.00 0.00 2.67
153 154 3.372025 GCAACTGGTCAAGGGATAGGAAT 60.372 47.826 0.00 0.00 0.00 3.01
154 155 2.026262 GCAACTGGTCAAGGGATAGGAA 60.026 50.000 0.00 0.00 0.00 3.36
155 156 1.559682 GCAACTGGTCAAGGGATAGGA 59.440 52.381 0.00 0.00 0.00 2.94
156 157 1.408822 GGCAACTGGTCAAGGGATAGG 60.409 57.143 0.00 0.00 0.00 2.57
157 158 2.044123 GGCAACTGGTCAAGGGATAG 57.956 55.000 0.00 0.00 0.00 2.08
171 172 1.078759 CTGACCGTCGATGAGGCAAC 61.079 60.000 6.11 0.00 0.00 4.17
172 173 1.215382 CTGACCGTCGATGAGGCAA 59.785 57.895 6.11 0.00 0.00 4.52
173 174 1.248101 TTCTGACCGTCGATGAGGCA 61.248 55.000 6.11 3.83 0.00 4.75
174 175 0.526524 CTTCTGACCGTCGATGAGGC 60.527 60.000 6.11 0.00 0.00 4.70
175 176 1.064803 CTCTTCTGACCGTCGATGAGG 59.935 57.143 6.11 4.54 31.48 3.86
176 177 1.740585 ACTCTTCTGACCGTCGATGAG 59.259 52.381 21.24 21.24 37.42 2.90
177 178 1.468914 CACTCTTCTGACCGTCGATGA 59.531 52.381 6.11 2.42 0.00 2.92
178 179 1.468224 CCACTCTTCTGACCGTCGATG 60.468 57.143 0.00 0.00 0.00 3.84
179 180 0.811915 CCACTCTTCTGACCGTCGAT 59.188 55.000 0.00 0.00 0.00 3.59
180 181 1.241990 CCCACTCTTCTGACCGTCGA 61.242 60.000 0.00 0.00 0.00 4.20
181 182 1.213013 CCCACTCTTCTGACCGTCG 59.787 63.158 0.00 0.00 0.00 5.12
182 183 0.898789 TCCCCACTCTTCTGACCGTC 60.899 60.000 0.00 0.00 0.00 4.79
183 184 0.471211 TTCCCCACTCTTCTGACCGT 60.471 55.000 0.00 0.00 0.00 4.83
184 185 0.037232 GTTCCCCACTCTTCTGACCG 60.037 60.000 0.00 0.00 0.00 4.79
185 186 0.325272 GGTTCCCCACTCTTCTGACC 59.675 60.000 0.00 0.00 0.00 4.02
186 187 1.056660 TGGTTCCCCACTCTTCTGAC 58.943 55.000 0.00 0.00 35.17 3.51
187 188 1.909302 GATGGTTCCCCACTCTTCTGA 59.091 52.381 0.00 0.00 45.65 3.27
188 189 1.065126 GGATGGTTCCCCACTCTTCTG 60.065 57.143 0.00 0.00 45.65 3.02
189 190 1.290134 GGATGGTTCCCCACTCTTCT 58.710 55.000 0.00 0.00 45.65 2.85
190 191 3.884226 GGATGGTTCCCCACTCTTC 57.116 57.895 0.00 0.00 45.65 2.87
199 200 1.905637 ACAACGAAAGGGATGGTTCC 58.094 50.000 0.00 0.00 41.77 3.62
200 201 4.082949 CCTAAACAACGAAAGGGATGGTTC 60.083 45.833 0.00 0.00 0.00 3.62
201 202 3.824443 CCTAAACAACGAAAGGGATGGTT 59.176 43.478 0.00 0.00 0.00 3.67
202 203 3.181437 ACCTAAACAACGAAAGGGATGGT 60.181 43.478 0.00 0.00 33.16 3.55
203 204 3.418047 ACCTAAACAACGAAAGGGATGG 58.582 45.455 0.00 0.00 33.16 3.51
204 205 3.439129 GGACCTAAACAACGAAAGGGATG 59.561 47.826 0.00 0.00 33.16 3.51
205 206 3.329814 AGGACCTAAACAACGAAAGGGAT 59.670 43.478 0.00 0.00 33.16 3.85
206 207 2.707257 AGGACCTAAACAACGAAAGGGA 59.293 45.455 0.00 0.00 33.16 4.20
207 208 3.136009 AGGACCTAAACAACGAAAGGG 57.864 47.619 0.00 0.00 33.16 3.95
208 209 3.881089 ACAAGGACCTAAACAACGAAAGG 59.119 43.478 0.00 0.00 35.14 3.11
209 210 5.494632 AACAAGGACCTAAACAACGAAAG 57.505 39.130 0.00 0.00 0.00 2.62
210 211 6.993902 AGATAACAAGGACCTAAACAACGAAA 59.006 34.615 0.00 0.00 0.00 3.46
211 212 6.527423 AGATAACAAGGACCTAAACAACGAA 58.473 36.000 0.00 0.00 0.00 3.85
212 213 6.105397 AGATAACAAGGACCTAAACAACGA 57.895 37.500 0.00 0.00 0.00 3.85
213 214 6.796705 AAGATAACAAGGACCTAAACAACG 57.203 37.500 0.00 0.00 0.00 4.10
214 215 8.727910 CCTAAAGATAACAAGGACCTAAACAAC 58.272 37.037 0.00 0.00 0.00 3.32
215 216 8.442374 ACCTAAAGATAACAAGGACCTAAACAA 58.558 33.333 0.00 0.00 33.16 2.83
216 217 7.981142 ACCTAAAGATAACAAGGACCTAAACA 58.019 34.615 0.00 0.00 33.16 2.83
217 218 8.319881 AGACCTAAAGATAACAAGGACCTAAAC 58.680 37.037 0.00 0.00 33.16 2.01
218 219 8.445361 AGACCTAAAGATAACAAGGACCTAAA 57.555 34.615 0.00 0.00 33.16 1.85
219 220 8.445361 AAGACCTAAAGATAACAAGGACCTAA 57.555 34.615 0.00 0.00 33.16 2.69
220 221 8.319146 CAAAGACCTAAAGATAACAAGGACCTA 58.681 37.037 0.00 0.00 33.16 3.08
221 222 6.954352 AAGACCTAAAGATAACAAGGACCT 57.046 37.500 0.00 0.00 33.16 3.85
222 223 6.940867 ACAAAGACCTAAAGATAACAAGGACC 59.059 38.462 0.00 0.00 33.16 4.46
223 224 7.981102 ACAAAGACCTAAAGATAACAAGGAC 57.019 36.000 0.00 0.00 33.16 3.85
224 225 7.664318 GGAACAAAGACCTAAAGATAACAAGGA 59.336 37.037 0.00 0.00 33.16 3.36
225 226 7.094334 GGGAACAAAGACCTAAAGATAACAAGG 60.094 40.741 0.00 0.00 35.14 3.61
226 227 7.665974 AGGGAACAAAGACCTAAAGATAACAAG 59.334 37.037 0.00 0.00 31.53 3.16
227 228 7.447238 CAGGGAACAAAGACCTAAAGATAACAA 59.553 37.037 0.00 0.00 32.22 2.83
228 229 6.940298 CAGGGAACAAAGACCTAAAGATAACA 59.060 38.462 0.00 0.00 32.22 2.41
229 230 6.374613 CCAGGGAACAAAGACCTAAAGATAAC 59.625 42.308 0.00 0.00 32.22 1.89
230 231 6.045106 ACCAGGGAACAAAGACCTAAAGATAA 59.955 38.462 0.00 0.00 32.22 1.75
231 232 5.550403 ACCAGGGAACAAAGACCTAAAGATA 59.450 40.000 0.00 0.00 32.22 1.98
232 233 4.354087 ACCAGGGAACAAAGACCTAAAGAT 59.646 41.667 0.00 0.00 32.22 2.40
233 234 3.720002 ACCAGGGAACAAAGACCTAAAGA 59.280 43.478 0.00 0.00 32.22 2.52
234 235 3.821033 CACCAGGGAACAAAGACCTAAAG 59.179 47.826 0.00 0.00 32.22 1.85
235 236 3.435890 CCACCAGGGAACAAAGACCTAAA 60.436 47.826 0.00 0.00 40.01 1.85
236 237 2.107552 CCACCAGGGAACAAAGACCTAA 59.892 50.000 0.00 0.00 40.01 2.69
237 238 1.702957 CCACCAGGGAACAAAGACCTA 59.297 52.381 0.00 0.00 40.01 3.08
238 239 0.478507 CCACCAGGGAACAAAGACCT 59.521 55.000 0.00 0.00 40.01 3.85
239 240 1.179174 GCCACCAGGGAACAAAGACC 61.179 60.000 0.00 0.00 40.01 3.85
240 241 0.467290 TGCCACCAGGGAACAAAGAC 60.467 55.000 0.00 0.00 40.01 3.01
241 242 0.482446 ATGCCACCAGGGAACAAAGA 59.518 50.000 0.00 0.00 39.40 2.52
242 243 0.890683 GATGCCACCAGGGAACAAAG 59.109 55.000 0.00 0.00 39.40 2.77
243 244 0.893270 CGATGCCACCAGGGAACAAA 60.893 55.000 0.00 0.00 39.40 2.83
244 245 1.303236 CGATGCCACCAGGGAACAA 60.303 57.895 0.00 0.00 39.40 2.83
245 246 2.220586 TCGATGCCACCAGGGAACA 61.221 57.895 0.00 0.00 39.40 3.18
246 247 1.745489 GTCGATGCCACCAGGGAAC 60.745 63.158 0.00 0.00 39.40 3.62
247 248 2.668632 GTCGATGCCACCAGGGAA 59.331 61.111 0.00 0.00 39.40 3.97
248 249 3.770040 CGTCGATGCCACCAGGGA 61.770 66.667 0.00 0.00 40.01 4.20
249 250 3.094062 ATCGTCGATGCCACCAGGG 62.094 63.158 7.00 0.00 40.85 4.45
250 251 1.884464 CATCGTCGATGCCACCAGG 60.884 63.158 21.42 0.00 33.17 4.45
251 252 0.249615 ATCATCGTCGATGCCACCAG 60.250 55.000 26.86 5.35 39.63 4.00
252 253 0.530431 CATCATCGTCGATGCCACCA 60.530 55.000 26.86 12.40 39.63 4.17
253 254 0.249447 TCATCATCGTCGATGCCACC 60.249 55.000 26.86 0.00 42.15 4.61
254 255 0.855349 GTCATCATCGTCGATGCCAC 59.145 55.000 26.86 18.73 42.15 5.01
255 256 0.594796 CGTCATCATCGTCGATGCCA 60.595 55.000 26.86 13.77 42.15 4.92
256 257 1.278172 CCGTCATCATCGTCGATGCC 61.278 60.000 26.86 14.56 42.15 4.40
257 258 1.880601 GCCGTCATCATCGTCGATGC 61.881 60.000 26.86 13.88 42.15 3.91
258 259 1.600284 CGCCGTCATCATCGTCGATG 61.600 60.000 25.98 25.98 43.50 3.84
259 260 1.370535 CGCCGTCATCATCGTCGAT 60.371 57.895 0.75 0.75 31.56 3.59
260 261 1.782028 ATCGCCGTCATCATCGTCGA 61.782 55.000 0.00 0.00 42.18 4.20
261 262 1.330779 GATCGCCGTCATCATCGTCG 61.331 60.000 0.00 0.00 0.00 5.12
262 263 1.004277 GGATCGCCGTCATCATCGTC 61.004 60.000 0.00 0.00 0.00 4.20
263 264 1.007271 GGATCGCCGTCATCATCGT 60.007 57.895 0.00 0.00 0.00 3.73
264 265 3.848142 GGATCGCCGTCATCATCG 58.152 61.111 0.00 0.00 0.00 3.84
274 275 1.680207 ACCTTACTCTAACGGATCGCC 59.320 52.381 0.00 0.00 0.00 5.54
275 276 2.601741 CGACCTTACTCTAACGGATCGC 60.602 54.545 0.00 0.00 0.00 4.58
276 277 2.611292 ACGACCTTACTCTAACGGATCG 59.389 50.000 0.00 0.00 0.00 3.69
277 278 4.629251 AACGACCTTACTCTAACGGATC 57.371 45.455 0.00 0.00 0.00 3.36
278 279 4.142293 GGAAACGACCTTACTCTAACGGAT 60.142 45.833 0.00 0.00 0.00 4.18
279 280 3.191371 GGAAACGACCTTACTCTAACGGA 59.809 47.826 0.00 0.00 0.00 4.69
280 281 3.192212 AGGAAACGACCTTACTCTAACGG 59.808 47.826 0.00 0.00 36.86 4.44
281 282 4.431661 AGGAAACGACCTTACTCTAACG 57.568 45.455 0.00 0.00 36.86 3.18
293 294 2.921754 CGATGTCAAGGTAGGAAACGAC 59.078 50.000 0.00 0.00 34.90 4.34
294 295 2.094390 CCGATGTCAAGGTAGGAAACGA 60.094 50.000 0.00 0.00 0.00 3.85
295 296 2.268298 CCGATGTCAAGGTAGGAAACG 58.732 52.381 0.00 0.00 0.00 3.60
296 297 2.007608 GCCGATGTCAAGGTAGGAAAC 58.992 52.381 0.00 0.00 0.00 2.78
297 298 1.404986 CGCCGATGTCAAGGTAGGAAA 60.405 52.381 0.00 0.00 0.00 3.13
298 299 0.174845 CGCCGATGTCAAGGTAGGAA 59.825 55.000 0.00 0.00 0.00 3.36
299 300 1.672854 CCGCCGATGTCAAGGTAGGA 61.673 60.000 0.00 0.00 32.10 2.94
300 301 1.227263 CCGCCGATGTCAAGGTAGG 60.227 63.158 0.00 1.39 0.00 3.18
301 302 1.883084 GCCGCCGATGTCAAGGTAG 60.883 63.158 0.00 0.00 0.00 3.18
302 303 2.185867 GCCGCCGATGTCAAGGTA 59.814 61.111 0.00 0.00 0.00 3.08
303 304 3.958147 CTGCCGCCGATGTCAAGGT 62.958 63.158 0.00 0.00 0.00 3.50
304 305 3.197790 CTGCCGCCGATGTCAAGG 61.198 66.667 0.00 0.00 0.00 3.61
305 306 3.869272 GCTGCCGCCGATGTCAAG 61.869 66.667 0.00 0.00 0.00 3.02
319 320 2.361610 AAAGCACCATCCCCGCTG 60.362 61.111 0.00 0.00 35.79 5.18
320 321 2.361610 CAAAGCACCATCCCCGCT 60.362 61.111 0.00 0.00 37.68 5.52
321 322 3.451894 CCAAAGCACCATCCCCGC 61.452 66.667 0.00 0.00 0.00 6.13
322 323 2.572333 ATCCCAAAGCACCATCCCCG 62.572 60.000 0.00 0.00 0.00 5.73
323 324 0.756815 GATCCCAAAGCACCATCCCC 60.757 60.000 0.00 0.00 0.00 4.81
324 325 0.033208 TGATCCCAAAGCACCATCCC 60.033 55.000 0.00 0.00 0.00 3.85
325 326 1.396653 CTGATCCCAAAGCACCATCC 58.603 55.000 0.00 0.00 0.00 3.51
326 327 1.341383 ACCTGATCCCAAAGCACCATC 60.341 52.381 0.00 0.00 0.00 3.51
327 328 0.706433 ACCTGATCCCAAAGCACCAT 59.294 50.000 0.00 0.00 0.00 3.55
328 329 0.038166 GACCTGATCCCAAAGCACCA 59.962 55.000 0.00 0.00 0.00 4.17
329 330 0.329596 AGACCTGATCCCAAAGCACC 59.670 55.000 0.00 0.00 0.00 5.01
330 331 1.280421 AGAGACCTGATCCCAAAGCAC 59.720 52.381 0.00 0.00 0.00 4.40
331 332 1.556911 GAGAGACCTGATCCCAAAGCA 59.443 52.381 0.00 0.00 0.00 3.91
332 333 1.134250 GGAGAGACCTGATCCCAAAGC 60.134 57.143 0.00 0.00 35.41 3.51
333 334 2.998316 GGAGAGACCTGATCCCAAAG 57.002 55.000 0.00 0.00 35.41 2.77
338 339 1.501604 AGGTAGGGAGAGACCTGATCC 59.498 57.143 0.00 0.00 44.64 3.36
339 340 3.322191 AAGGTAGGGAGAGACCTGATC 57.678 52.381 0.00 0.00 45.64 2.92
340 341 4.548669 GTTAAGGTAGGGAGAGACCTGAT 58.451 47.826 0.00 0.00 45.64 2.90
341 342 3.624205 CGTTAAGGTAGGGAGAGACCTGA 60.624 52.174 0.00 0.00 45.64 3.86
342 343 2.688958 CGTTAAGGTAGGGAGAGACCTG 59.311 54.545 0.00 0.00 45.64 4.00
344 345 3.010200 TCGTTAAGGTAGGGAGAGACC 57.990 52.381 0.00 0.00 35.83 3.85
345 346 3.569277 GGATCGTTAAGGTAGGGAGAGAC 59.431 52.174 0.00 0.00 0.00 3.36
346 347 3.746751 CGGATCGTTAAGGTAGGGAGAGA 60.747 52.174 0.00 0.00 0.00 3.10
347 348 2.553172 CGGATCGTTAAGGTAGGGAGAG 59.447 54.545 0.00 0.00 0.00 3.20
348 349 2.092212 ACGGATCGTTAAGGTAGGGAGA 60.092 50.000 0.00 0.00 36.35 3.71
349 350 2.292845 GACGGATCGTTAAGGTAGGGAG 59.707 54.545 0.00 0.00 41.37 4.30
350 351 2.301346 GACGGATCGTTAAGGTAGGGA 58.699 52.381 0.00 0.00 41.37 4.20
351 352 2.026641 TGACGGATCGTTAAGGTAGGG 58.973 52.381 0.00 0.00 41.37 3.53
352 353 3.317149 TGATGACGGATCGTTAAGGTAGG 59.683 47.826 0.00 0.00 41.37 3.18
353 354 4.563337 TGATGACGGATCGTTAAGGTAG 57.437 45.455 0.00 0.00 41.37 3.18
354 355 4.158209 TGTTGATGACGGATCGTTAAGGTA 59.842 41.667 0.00 0.00 41.37 3.08
355 356 3.056393 TGTTGATGACGGATCGTTAAGGT 60.056 43.478 0.00 0.00 41.37 3.50
356 357 3.517602 TGTTGATGACGGATCGTTAAGG 58.482 45.455 0.00 0.00 41.37 2.69
357 358 5.445939 CCTTTGTTGATGACGGATCGTTAAG 60.446 44.000 0.00 0.00 41.37 1.85
358 359 4.390603 CCTTTGTTGATGACGGATCGTTAA 59.609 41.667 0.00 0.00 41.37 2.01
359 360 3.930229 CCTTTGTTGATGACGGATCGTTA 59.070 43.478 0.00 0.00 41.37 3.18
360 361 2.742053 CCTTTGTTGATGACGGATCGTT 59.258 45.455 0.00 0.00 41.37 3.85
361 362 2.346803 CCTTTGTTGATGACGGATCGT 58.653 47.619 0.00 0.00 45.10 3.73
362 363 1.665679 CCCTTTGTTGATGACGGATCG 59.334 52.381 0.00 0.00 33.17 3.69
363 364 1.401905 GCCCTTTGTTGATGACGGATC 59.598 52.381 0.00 0.00 0.00 3.36
364 365 1.463674 GCCCTTTGTTGATGACGGAT 58.536 50.000 0.00 0.00 0.00 4.18
365 366 0.608035 GGCCCTTTGTTGATGACGGA 60.608 55.000 0.00 0.00 0.00 4.69
366 367 1.883021 GGCCCTTTGTTGATGACGG 59.117 57.895 0.00 0.00 0.00 4.79
367 368 1.501741 CGGCCCTTTGTTGATGACG 59.498 57.895 0.00 0.00 0.00 4.35
368 369 1.212751 GCGGCCCTTTGTTGATGAC 59.787 57.895 0.00 0.00 0.00 3.06
369 370 2.331893 CGCGGCCCTTTGTTGATGA 61.332 57.895 0.00 0.00 0.00 2.92
370 371 1.861542 TTCGCGGCCCTTTGTTGATG 61.862 55.000 6.13 0.00 0.00 3.07
371 372 1.586154 CTTCGCGGCCCTTTGTTGAT 61.586 55.000 6.13 0.00 0.00 2.57
372 373 2.203224 TTCGCGGCCCTTTGTTGA 60.203 55.556 6.13 0.00 0.00 3.18
373 374 1.586154 ATCTTCGCGGCCCTTTGTTG 61.586 55.000 6.13 0.00 0.00 3.33
374 375 0.035820 TATCTTCGCGGCCCTTTGTT 60.036 50.000 6.13 0.00 0.00 2.83
375 376 0.462047 CTATCTTCGCGGCCCTTTGT 60.462 55.000 6.13 0.00 0.00 2.83
376 377 1.160329 CCTATCTTCGCGGCCCTTTG 61.160 60.000 6.13 0.00 0.00 2.77
377 378 1.146263 CCTATCTTCGCGGCCCTTT 59.854 57.895 6.13 0.00 0.00 3.11
378 379 2.064581 ACCTATCTTCGCGGCCCTT 61.065 57.895 6.13 0.00 0.00 3.95
379 380 2.444140 ACCTATCTTCGCGGCCCT 60.444 61.111 6.13 0.00 0.00 5.19
380 381 2.280186 CACCTATCTTCGCGGCCC 60.280 66.667 6.13 0.00 0.00 5.80
381 382 2.967615 GCACCTATCTTCGCGGCC 60.968 66.667 6.13 0.00 0.00 6.13
382 383 2.202878 TGCACCTATCTTCGCGGC 60.203 61.111 6.13 0.00 0.00 6.53
383 384 0.596083 CTCTGCACCTATCTTCGCGG 60.596 60.000 6.13 0.00 0.00 6.46
384 385 0.101399 ACTCTGCACCTATCTTCGCG 59.899 55.000 0.00 0.00 0.00 5.87
385 386 1.565305 CACTCTGCACCTATCTTCGC 58.435 55.000 0.00 0.00 0.00 4.70
386 387 1.751351 TCCACTCTGCACCTATCTTCG 59.249 52.381 0.00 0.00 0.00 3.79
387 388 3.726607 CATCCACTCTGCACCTATCTTC 58.273 50.000 0.00 0.00 0.00 2.87
388 389 2.158842 GCATCCACTCTGCACCTATCTT 60.159 50.000 0.00 0.00 39.46 2.40
389 390 1.415659 GCATCCACTCTGCACCTATCT 59.584 52.381 0.00 0.00 39.46 1.98
390 391 1.542108 GGCATCCACTCTGCACCTATC 60.542 57.143 0.00 0.00 41.47 2.08
391 392 0.471617 GGCATCCACTCTGCACCTAT 59.528 55.000 0.00 0.00 41.47 2.57
392 393 0.618680 AGGCATCCACTCTGCACCTA 60.619 55.000 0.00 0.00 41.47 3.08
393 394 0.618680 TAGGCATCCACTCTGCACCT 60.619 55.000 0.00 0.00 41.47 4.00
394 395 0.179062 CTAGGCATCCACTCTGCACC 60.179 60.000 0.00 0.00 41.47 5.01
395 396 0.539051 ACTAGGCATCCACTCTGCAC 59.461 55.000 0.00 0.00 41.47 4.57
396 397 2.159179 TACTAGGCATCCACTCTGCA 57.841 50.000 0.00 0.00 41.47 4.41
397 398 4.464244 TGATATACTAGGCATCCACTCTGC 59.536 45.833 0.00 0.00 38.93 4.26
398 399 6.379417 TGATGATATACTAGGCATCCACTCTG 59.621 42.308 0.00 0.00 37.04 3.35
399 400 6.497640 TGATGATATACTAGGCATCCACTCT 58.502 40.000 0.00 0.00 37.04 3.24
400 401 6.782082 TGATGATATACTAGGCATCCACTC 57.218 41.667 0.00 0.00 37.04 3.51
401 402 6.956435 TCTTGATGATATACTAGGCATCCACT 59.044 38.462 0.00 0.00 37.04 4.00
402 403 7.038659 GTCTTGATGATATACTAGGCATCCAC 58.961 42.308 0.00 0.00 37.04 4.02
403 404 6.155221 GGTCTTGATGATATACTAGGCATCCA 59.845 42.308 0.00 0.00 37.04 3.41
404 405 6.155221 TGGTCTTGATGATATACTAGGCATCC 59.845 42.308 0.00 0.00 37.04 3.51
405 406 7.175347 TGGTCTTGATGATATACTAGGCATC 57.825 40.000 0.00 0.00 38.05 3.91
406 407 7.746243 ATGGTCTTGATGATATACTAGGCAT 57.254 36.000 0.00 0.00 0.00 4.40
407 408 8.664669 TTATGGTCTTGATGATATACTAGGCA 57.335 34.615 0.00 0.00 0.00 4.75
408 409 9.593134 CTTTATGGTCTTGATGATATACTAGGC 57.407 37.037 0.00 0.00 0.00 3.93
412 413 8.861086 ACGTCTTTATGGTCTTGATGATATACT 58.139 33.333 0.00 0.00 0.00 2.12
415 416 8.861086 ACTACGTCTTTATGGTCTTGATGATAT 58.139 33.333 0.00 0.00 0.00 1.63
416 417 8.135529 CACTACGTCTTTATGGTCTTGATGATA 58.864 37.037 0.00 0.00 0.00 2.15
417 418 6.980978 CACTACGTCTTTATGGTCTTGATGAT 59.019 38.462 0.00 0.00 0.00 2.45
418 419 6.330278 CACTACGTCTTTATGGTCTTGATGA 58.670 40.000 0.00 0.00 0.00 2.92
419 420 5.005779 GCACTACGTCTTTATGGTCTTGATG 59.994 44.000 0.00 0.00 0.00 3.07
420 421 5.109903 GCACTACGTCTTTATGGTCTTGAT 58.890 41.667 0.00 0.00 0.00 2.57
421 422 4.021807 TGCACTACGTCTTTATGGTCTTGA 60.022 41.667 0.00 0.00 0.00 3.02
422 423 4.091509 GTGCACTACGTCTTTATGGTCTTG 59.908 45.833 10.32 0.00 0.00 3.02
423 424 4.243270 GTGCACTACGTCTTTATGGTCTT 58.757 43.478 10.32 0.00 0.00 3.01
424 425 3.257375 TGTGCACTACGTCTTTATGGTCT 59.743 43.478 19.41 0.00 0.00 3.85
425 426 3.581755 TGTGCACTACGTCTTTATGGTC 58.418 45.455 19.41 0.00 0.00 4.02
426 427 3.671008 TGTGCACTACGTCTTTATGGT 57.329 42.857 19.41 0.00 0.00 3.55
427 428 6.844696 ATAATGTGCACTACGTCTTTATGG 57.155 37.500 19.41 0.00 0.00 2.74
428 429 9.210426 GAAAATAATGTGCACTACGTCTTTATG 57.790 33.333 19.41 0.00 0.00 1.90
429 430 8.941977 TGAAAATAATGTGCACTACGTCTTTAT 58.058 29.630 19.41 7.12 0.00 1.40
430 431 8.312896 TGAAAATAATGTGCACTACGTCTTTA 57.687 30.769 19.41 5.24 0.00 1.85
431 432 7.197071 TGAAAATAATGTGCACTACGTCTTT 57.803 32.000 19.41 10.25 0.00 2.52
432 433 6.620733 GCTGAAAATAATGTGCACTACGTCTT 60.621 38.462 19.41 4.99 0.00 3.01
433 434 5.163854 GCTGAAAATAATGTGCACTACGTCT 60.164 40.000 19.41 0.00 0.00 4.18
434 435 5.022021 GCTGAAAATAATGTGCACTACGTC 58.978 41.667 19.41 6.90 0.00 4.34
435 436 4.695455 AGCTGAAAATAATGTGCACTACGT 59.305 37.500 19.41 0.00 0.00 3.57
436 437 5.023920 CAGCTGAAAATAATGTGCACTACG 58.976 41.667 19.41 0.00 0.00 3.51
437 438 4.795278 GCAGCTGAAAATAATGTGCACTAC 59.205 41.667 20.43 0.00 0.00 2.73
438 439 4.142403 GGCAGCTGAAAATAATGTGCACTA 60.142 41.667 20.43 3.01 0.00 2.74
439 440 3.367703 GGCAGCTGAAAATAATGTGCACT 60.368 43.478 20.43 0.28 0.00 4.40
440 441 2.925563 GGCAGCTGAAAATAATGTGCAC 59.074 45.455 20.43 10.75 0.00 4.57
441 442 2.561858 TGGCAGCTGAAAATAATGTGCA 59.438 40.909 20.43 0.00 0.00 4.57
442 443 3.235157 TGGCAGCTGAAAATAATGTGC 57.765 42.857 20.43 0.00 0.00 4.57
443 444 4.628333 CCTTTGGCAGCTGAAAATAATGTG 59.372 41.667 20.43 4.26 0.00 3.21
444 445 4.322953 CCCTTTGGCAGCTGAAAATAATGT 60.323 41.667 20.43 0.00 0.00 2.71
445 446 4.186159 CCCTTTGGCAGCTGAAAATAATG 58.814 43.478 20.43 5.27 0.00 1.90
446 447 3.840078 ACCCTTTGGCAGCTGAAAATAAT 59.160 39.130 20.43 2.73 33.59 1.28
447 448 3.006752 CACCCTTTGGCAGCTGAAAATAA 59.993 43.478 20.43 1.05 33.59 1.40
448 449 2.562298 CACCCTTTGGCAGCTGAAAATA 59.438 45.455 20.43 0.00 33.59 1.40
449 450 1.345415 CACCCTTTGGCAGCTGAAAAT 59.655 47.619 20.43 0.00 33.59 1.82
450 451 0.752054 CACCCTTTGGCAGCTGAAAA 59.248 50.000 20.43 15.62 33.59 2.29
451 452 0.106268 TCACCCTTTGGCAGCTGAAA 60.106 50.000 20.43 9.22 33.59 2.69
452 453 0.106268 TTCACCCTTTGGCAGCTGAA 60.106 50.000 20.43 0.00 33.59 3.02
453 454 0.538057 CTTCACCCTTTGGCAGCTGA 60.538 55.000 20.43 0.00 33.59 4.26
454 455 1.530013 CCTTCACCCTTTGGCAGCTG 61.530 60.000 10.11 10.11 33.59 4.24
455 456 1.228675 CCTTCACCCTTTGGCAGCT 60.229 57.895 0.00 0.00 33.59 4.24
456 457 0.827507 TTCCTTCACCCTTTGGCAGC 60.828 55.000 0.00 0.00 33.59 5.25
457 458 1.251251 CTTCCTTCACCCTTTGGCAG 58.749 55.000 0.00 0.00 33.59 4.85
458 459 0.555769 ACTTCCTTCACCCTTTGGCA 59.444 50.000 0.00 0.00 33.59 4.92
459 460 0.961753 CACTTCCTTCACCCTTTGGC 59.038 55.000 0.00 0.00 33.59 4.52
460 461 1.956477 CACACTTCCTTCACCCTTTGG 59.044 52.381 0.00 0.00 37.80 3.28
461 462 1.956477 CCACACTTCCTTCACCCTTTG 59.044 52.381 0.00 0.00 0.00 2.77
462 463 1.850345 TCCACACTTCCTTCACCCTTT 59.150 47.619 0.00 0.00 0.00 3.11
463 464 1.421646 CTCCACACTTCCTTCACCCTT 59.578 52.381 0.00 0.00 0.00 3.95
464 465 1.059913 CTCCACACTTCCTTCACCCT 58.940 55.000 0.00 0.00 0.00 4.34
465 466 0.036875 CCTCCACACTTCCTTCACCC 59.963 60.000 0.00 0.00 0.00 4.61
466 467 0.036875 CCCTCCACACTTCCTTCACC 59.963 60.000 0.00 0.00 0.00 4.02
467 468 0.765510 ACCCTCCACACTTCCTTCAC 59.234 55.000 0.00 0.00 0.00 3.18
468 469 1.056660 GACCCTCCACACTTCCTTCA 58.943 55.000 0.00 0.00 0.00 3.02
469 470 1.353091 AGACCCTCCACACTTCCTTC 58.647 55.000 0.00 0.00 0.00 3.46
470 471 1.421646 CAAGACCCTCCACACTTCCTT 59.578 52.381 0.00 0.00 0.00 3.36
471 472 1.059913 CAAGACCCTCCACACTTCCT 58.940 55.000 0.00 0.00 0.00 3.36
472 473 0.036875 CCAAGACCCTCCACACTTCC 59.963 60.000 0.00 0.00 0.00 3.46
473 474 0.036875 CCCAAGACCCTCCACACTTC 59.963 60.000 0.00 0.00 0.00 3.01
474 475 2.069165 GCCCAAGACCCTCCACACTT 62.069 60.000 0.00 0.00 0.00 3.16
475 476 2.529744 GCCCAAGACCCTCCACACT 61.530 63.158 0.00 0.00 0.00 3.55
476 477 1.198759 TAGCCCAAGACCCTCCACAC 61.199 60.000 0.00 0.00 0.00 3.82
477 478 0.474854 TTAGCCCAAGACCCTCCACA 60.475 55.000 0.00 0.00 0.00 4.17
478 479 0.035343 GTTAGCCCAAGACCCTCCAC 60.035 60.000 0.00 0.00 0.00 4.02
479 480 1.205460 GGTTAGCCCAAGACCCTCCA 61.205 60.000 0.00 0.00 0.00 3.86
480 481 0.914902 AGGTTAGCCCAAGACCCTCC 60.915 60.000 0.00 0.00 33.89 4.30
481 482 0.542333 GAGGTTAGCCCAAGACCCTC 59.458 60.000 0.00 0.00 33.89 4.30
482 483 1.265454 CGAGGTTAGCCCAAGACCCT 61.265 60.000 0.00 0.00 33.89 4.34
483 484 1.221021 CGAGGTTAGCCCAAGACCC 59.779 63.158 0.00 0.00 33.89 4.46
484 485 0.831307 ATCGAGGTTAGCCCAAGACC 59.169 55.000 0.00 0.00 34.66 3.85
485 486 1.480954 TGATCGAGGTTAGCCCAAGAC 59.519 52.381 0.00 0.00 34.66 3.01
486 487 1.860641 TGATCGAGGTTAGCCCAAGA 58.139 50.000 0.00 0.00 34.66 3.02
487 488 2.487934 CATGATCGAGGTTAGCCCAAG 58.512 52.381 0.00 0.00 34.66 3.61
488 489 1.140852 CCATGATCGAGGTTAGCCCAA 59.859 52.381 0.00 0.00 34.66 4.12
489 490 0.758734 CCATGATCGAGGTTAGCCCA 59.241 55.000 0.00 0.00 34.66 5.36
490 491 0.603975 GCCATGATCGAGGTTAGCCC 60.604 60.000 0.00 0.00 34.57 5.19
491 492 0.394565 AGCCATGATCGAGGTTAGCC 59.605 55.000 0.00 0.00 0.00 3.93
492 493 1.069204 TCAGCCATGATCGAGGTTAGC 59.931 52.381 0.00 0.00 0.00 3.09
493 494 2.288702 CCTCAGCCATGATCGAGGTTAG 60.289 54.545 13.29 1.52 40.21 2.34
494 495 1.688735 CCTCAGCCATGATCGAGGTTA 59.311 52.381 13.29 0.00 40.21 2.85
495 496 0.467384 CCTCAGCCATGATCGAGGTT 59.533 55.000 13.29 0.00 40.21 3.50
496 497 2.131405 CCTCAGCCATGATCGAGGT 58.869 57.895 13.29 0.00 40.21 3.85
498 499 1.336702 GCTACCTCAGCCATGATCGAG 60.337 57.143 0.00 0.00 45.23 4.04
499 500 0.676184 GCTACCTCAGCCATGATCGA 59.324 55.000 0.00 0.00 45.23 3.59
500 501 3.207677 GCTACCTCAGCCATGATCG 57.792 57.895 0.00 0.00 45.23 3.69
517 518 0.750182 AGAGAGTACCCAGCTCGAGC 60.750 60.000 30.01 30.01 37.99 5.03
518 519 1.673920 GAAGAGAGTACCCAGCTCGAG 59.326 57.143 8.45 8.45 37.99 4.04
519 520 1.752683 GAAGAGAGTACCCAGCTCGA 58.247 55.000 0.00 0.00 37.99 4.04
520 521 0.378962 CGAAGAGAGTACCCAGCTCG 59.621 60.000 0.00 0.00 37.99 5.03
521 522 1.402613 GACGAAGAGAGTACCCAGCTC 59.597 57.143 0.00 0.00 0.00 4.09
522 523 1.465794 GACGAAGAGAGTACCCAGCT 58.534 55.000 0.00 0.00 0.00 4.24
523 524 0.456628 GGACGAAGAGAGTACCCAGC 59.543 60.000 0.00 0.00 0.00 4.85
524 525 0.733729 CGGACGAAGAGAGTACCCAG 59.266 60.000 0.00 0.00 0.00 4.45
525 526 0.679002 CCGGACGAAGAGAGTACCCA 60.679 60.000 0.00 0.00 0.00 4.51
526 527 0.393537 TCCGGACGAAGAGAGTACCC 60.394 60.000 0.00 0.00 0.00 3.69
537 538 2.166050 TCCGACAAATAATTCCGGACGA 59.834 45.455 1.83 0.00 43.47 4.20
544 545 5.121142 TGTCCGTTTCTCCGACAAATAATTC 59.879 40.000 0.00 0.00 33.00 2.17
550 551 1.409790 TCTGTCCGTTTCTCCGACAAA 59.590 47.619 0.00 0.00 34.87 2.83
555 556 1.215647 CCCTCTGTCCGTTTCTCCG 59.784 63.158 0.00 0.00 0.00 4.63
557 558 1.258676 ACTCCCTCTGTCCGTTTCTC 58.741 55.000 0.00 0.00 0.00 2.87
563 564 1.404315 GCAAAGTACTCCCTCTGTCCG 60.404 57.143 0.00 0.00 0.00 4.79
564 565 1.623811 TGCAAAGTACTCCCTCTGTCC 59.376 52.381 0.00 0.00 0.00 4.02
567 568 2.739932 CGGATGCAAAGTACTCCCTCTG 60.740 54.545 0.00 0.00 0.00 3.35
568 569 1.482593 CGGATGCAAAGTACTCCCTCT 59.517 52.381 0.00 0.00 0.00 3.69
606 608 2.750888 GGCTCGTTGCAACCGATCC 61.751 63.158 23.42 21.56 45.15 3.36
687 691 1.153289 AATGCGCTCCCACTAGCTG 60.153 57.895 9.73 0.00 40.49 4.24
688 692 1.153289 CAATGCGCTCCCACTAGCT 60.153 57.895 9.73 0.00 40.49 3.32
689 693 1.450312 ACAATGCGCTCCCACTAGC 60.450 57.895 9.73 0.00 39.21 3.42
690 694 1.091771 CCACAATGCGCTCCCACTAG 61.092 60.000 9.73 0.00 0.00 2.57
691 695 1.078497 CCACAATGCGCTCCCACTA 60.078 57.895 9.73 0.00 0.00 2.74
692 696 2.360350 CCACAATGCGCTCCCACT 60.360 61.111 9.73 0.00 0.00 4.00
693 697 4.120331 GCCACAATGCGCTCCCAC 62.120 66.667 9.73 0.00 0.00 4.61
698 702 0.609131 AGTTAAGGCCACAATGCGCT 60.609 50.000 9.73 0.00 0.00 5.92
736 745 0.179059 TGCAGAAAGGTTCAGTGCGA 60.179 50.000 0.00 0.00 34.61 5.10
775 784 1.632965 GCCCACTTCCCCGAATACCT 61.633 60.000 0.00 0.00 0.00 3.08
826 855 3.636764 TGGCGAGTATTCTGAGCTTATCA 59.363 43.478 0.00 0.00 36.21 2.15
945 992 3.151958 AACGTGAGAGCTGTGCGGT 62.152 57.895 0.00 0.00 0.00 5.68
951 998 0.101399 ATAGCCGAACGTGAGAGCTG 59.899 55.000 11.56 0.00 35.03 4.24
1935 2017 1.897133 TGACCCGAGCTTAGCAGTTAA 59.103 47.619 7.07 0.00 0.00 2.01
1936 2018 1.476891 CTGACCCGAGCTTAGCAGTTA 59.523 52.381 7.07 0.00 0.00 2.24
1937 2019 0.247736 CTGACCCGAGCTTAGCAGTT 59.752 55.000 7.07 0.00 0.00 3.16
1938 2020 1.608717 CCTGACCCGAGCTTAGCAGT 61.609 60.000 7.07 0.00 0.00 4.40
2029 2111 4.755411 ACCATACAGTACATTTCTGTCCG 58.245 43.478 1.82 0.00 43.76 4.79
2050 2132 2.676342 GGTTCATGGTGGTGAATACGAC 59.324 50.000 0.00 0.00 39.99 4.34
2060 2142 2.162681 GAGGAAAGTGGTTCATGGTGG 58.837 52.381 0.00 0.00 38.06 4.61
2066 2148 4.593206 ACTGTGATAGAGGAAAGTGGTTCA 59.407 41.667 0.00 0.00 38.06 3.18
2095 2177 7.536281 ACAAAGTTTCACTTAGAACAAAACGAC 59.464 33.333 0.00 0.00 37.47 4.34
2165 2247 3.609853 TCTTCCGCAAGCTTGATAACAT 58.390 40.909 30.39 0.00 0.00 2.71
2167 2249 3.242870 CCATCTTCCGCAAGCTTGATAAC 60.243 47.826 30.39 11.04 0.00 1.89
2168 2250 2.945008 CCATCTTCCGCAAGCTTGATAA 59.055 45.455 30.39 17.43 0.00 1.75
2169 2251 2.564771 CCATCTTCCGCAAGCTTGATA 58.435 47.619 30.39 11.00 0.00 2.15
2210 2292 1.813753 CCACAATGTAGCCGGACCG 60.814 63.158 5.05 6.99 0.00 4.79
2359 2444 7.651304 TGTGAAAACAACCTATGCAACATAAAG 59.349 33.333 0.00 0.00 0.00 1.85
2408 2494 0.581529 CGCCCATGTGTATTGTAGCG 59.418 55.000 0.00 0.00 36.06 4.26
2448 2534 3.131755 TGTGGACACAACATTGCAATGAA 59.868 39.130 38.99 14.86 38.56 2.57
2474 2560 7.383029 CACAGGTCGACAACACTAAAAACTATA 59.617 37.037 18.91 0.00 0.00 1.31
2476 2562 5.521010 CACAGGTCGACAACACTAAAAACTA 59.479 40.000 18.91 0.00 0.00 2.24
2500 2586 4.526970 ACAACATAGGACCCACATCAATC 58.473 43.478 0.00 0.00 0.00 2.67
2509 2595 6.952773 TGCATTATAAACAACATAGGACCC 57.047 37.500 0.00 0.00 0.00 4.46
2513 2599 7.436118 AGCCATTGCATTATAAACAACATAGG 58.564 34.615 6.47 7.61 41.13 2.57
2686 2772 3.402110 CCGTCTATCCATAATGCAGCAA 58.598 45.455 0.00 0.00 0.00 3.91
2689 2775 2.303022 ACCCCGTCTATCCATAATGCAG 59.697 50.000 0.00 0.00 0.00 4.41
2694 2780 3.233507 GGTACACCCCGTCTATCCATAA 58.766 50.000 0.00 0.00 0.00 1.90
2710 2796 1.203052 GACGTTCGAATGGAGGGTACA 59.797 52.381 20.92 0.00 0.00 2.90
2749 2838 3.539107 CTAACGACGTTCGCGCCC 61.539 66.667 17.94 0.00 45.12 6.13
2855 2944 9.225436 GGCATTTAACCTTCCATGAAATAAAAA 57.775 29.630 0.00 0.00 0.00 1.94
2899 2988 5.481105 TCCCGTAAGTGTGTATTTAAGGTG 58.519 41.667 0.00 0.00 29.68 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.