Multiple sequence alignment - TraesCS3A01G372500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G372500 chr3A 100.000 5937 0 0 1 5937 623062994 623057058 0.000000e+00 10964.0
1 TraesCS3A01G372500 chr3A 100.000 32 0 0 3503 3534 623059391 623059422 6.430000e-05 60.2
2 TraesCS3A01G372500 chr3A 100.000 32 0 0 3573 3604 623059461 623059492 6.430000e-05 60.2
3 TraesCS3A01G372500 chr3B 94.092 3470 143 30 111 3562 640076595 640073170 0.000000e+00 5216.0
4 TraesCS3A01G372500 chr3B 90.210 1859 109 30 4092 5937 640072613 640070815 0.000000e+00 2357.0
5 TraesCS3A01G372500 chr3B 86.735 98 6 1 13 110 640077875 640077785 1.050000e-17 102.0
6 TraesCS3A01G372500 chr3B 87.302 63 2 3 4044 4100 640072961 640072899 3.840000e-07 67.6
7 TraesCS3A01G372500 chr3D 94.679 3345 129 18 229 3562 479630942 479627636 0.000000e+00 5145.0
8 TraesCS3A01G372500 chr3D 89.306 1945 109 40 4019 5937 479626903 479625032 0.000000e+00 2348.0
9 TraesCS3A01G372500 chr3D 92.793 333 16 4 3693 4021 479627389 479627061 5.380000e-130 475.0
10 TraesCS3A01G372500 chr3D 100.000 32 0 0 3573 3604 479627663 479627694 6.430000e-05 60.2
11 TraesCS3A01G372500 chr1A 90.164 61 5 1 670 730 585988118 585988059 1.770000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G372500 chr3A 623057058 623062994 5936 True 10964.00 10964 100.000000 1 5937 1 chr3A.!!$R1 5936
1 TraesCS3A01G372500 chr3B 640070815 640077875 7060 True 1935.65 5216 89.584750 13 5937 4 chr3B.!!$R1 5924
2 TraesCS3A01G372500 chr3D 479625032 479630942 5910 True 2656.00 5145 92.259333 229 5937 3 chr3D.!!$R1 5708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
252 1444 0.385974 CCGTTTCCGCAAAGAGCAAG 60.386 55.0 0.00 0.0 46.13 4.01 F
656 1859 0.537188 TTCCTCATCGAGTTCCTGCC 59.463 55.0 0.00 0.0 0.00 4.85 F
1365 2571 0.987294 ACATCCTGGAGAAGTGTGGG 59.013 55.0 1.52 0.0 0.00 4.61 F
2355 3562 0.388134 CAGCACAGCCTCATTGCAAC 60.388 55.0 0.00 0.0 38.81 4.17 F
2961 4173 0.167908 GGTGTGTGTGTGTGTGTGTG 59.832 55.0 0.00 0.0 0.00 3.82 F
3960 5292 0.036105 TGTGAATGTGCTCGATGGCT 60.036 50.0 0.00 0.0 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1260 2466 0.896479 ATGCAATCACAGGTGCTGCA 60.896 50.000 22.47 22.47 45.89 4.41 R
1611 2817 1.331138 TCCACGCCAACTGTTTTTACG 59.669 47.619 0.00 0.00 0.00 3.18 R
2946 4158 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72 R
3576 4813 0.690762 TGGTTGCTCACCCTACCTTC 59.309 55.000 3.46 0.00 46.68 3.46 R
4610 6402 0.451383 GCACAACACAGTTGACAGCA 59.549 50.000 15.99 0.00 0.00 4.41 R
5881 7704 0.179111 TTCAGCTGACTAATCCGCCG 60.179 55.000 18.03 0.00 35.78 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 5.806286 ACTGTTCATTTTTATATCCGTGCG 58.194 37.500 0.00 0.00 0.00 5.34
49 50 4.680237 CCGTGCGTCTTGCCTCCA 62.680 66.667 0.00 0.00 45.60 3.86
53 54 1.148273 TGCGTCTTGCCTCCAGTTT 59.852 52.632 0.00 0.00 45.60 2.66
54 55 0.465460 TGCGTCTTGCCTCCAGTTTT 60.465 50.000 0.00 0.00 45.60 2.43
55 56 1.202710 TGCGTCTTGCCTCCAGTTTTA 60.203 47.619 0.00 0.00 45.60 1.52
56 57 2.084546 GCGTCTTGCCTCCAGTTTTAT 58.915 47.619 0.00 0.00 37.76 1.40
57 58 3.267483 GCGTCTTGCCTCCAGTTTTATA 58.733 45.455 0.00 0.00 37.76 0.98
58 59 3.877508 GCGTCTTGCCTCCAGTTTTATAT 59.122 43.478 0.00 0.00 37.76 0.86
59 60 5.054477 GCGTCTTGCCTCCAGTTTTATATA 58.946 41.667 0.00 0.00 37.76 0.86
110 111 4.293494 AGATCAAGATCCTGTGGCTTAGA 58.707 43.478 6.45 0.00 38.58 2.10
111 112 4.718774 AGATCAAGATCCTGTGGCTTAGAA 59.281 41.667 6.45 0.00 38.58 2.10
112 113 4.478206 TCAAGATCCTGTGGCTTAGAAG 57.522 45.455 0.00 0.00 0.00 2.85
113 114 3.198635 TCAAGATCCTGTGGCTTAGAAGG 59.801 47.826 0.00 0.00 0.00 3.46
130 1321 2.347490 GGTGTGTGTGCTCGGGAT 59.653 61.111 0.00 0.00 0.00 3.85
131 1322 2.034879 GGTGTGTGTGCTCGGGATG 61.035 63.158 0.00 0.00 0.00 3.51
132 1323 2.358615 TGTGTGTGCTCGGGATGC 60.359 61.111 0.00 0.00 0.00 3.91
133 1324 2.358615 GTGTGTGCTCGGGATGCA 60.359 61.111 0.00 0.00 38.19 3.96
138 1329 4.819783 TGCTCGGGATGCACTTTT 57.180 50.000 0.00 0.00 35.31 2.27
139 1330 3.034924 TGCTCGGGATGCACTTTTT 57.965 47.368 0.00 0.00 35.31 1.94
187 1378 4.272100 ACGGGCATACGTGTTGTC 57.728 55.556 0.00 0.00 46.64 3.18
189 1380 0.669318 ACGGGCATACGTGTTGTCTG 60.669 55.000 11.01 11.01 46.64 3.51
199 1390 1.160137 GTGTTGTCTGGCTGATGACC 58.840 55.000 0.00 0.00 32.67 4.02
224 1415 4.079980 TCCTGAATGAAAGACGGAAACA 57.920 40.909 0.00 0.00 0.00 2.83
227 1418 4.976116 CCTGAATGAAAGACGGAAACAAAC 59.024 41.667 0.00 0.00 0.00 2.93
245 1437 3.434454 GGAACCCGTTTCCGCAAA 58.566 55.556 0.00 0.00 44.77 3.68
252 1444 0.385974 CCGTTTCCGCAAAGAGCAAG 60.386 55.000 0.00 0.00 46.13 4.01
260 1452 2.961436 CGCAAAGAGCAAGCGTAATAG 58.039 47.619 0.00 0.00 45.82 1.73
579 1782 2.893398 GGCGGTCGACTGATTCCT 59.107 61.111 28.38 0.00 0.00 3.36
656 1859 0.537188 TTCCTCATCGAGTTCCTGCC 59.463 55.000 0.00 0.00 0.00 4.85
659 1862 1.688735 CCTCATCGAGTTCCTGCCATA 59.311 52.381 0.00 0.00 0.00 2.74
762 1966 3.877735 GCCTCCATAATTTCTGGGTGTGT 60.878 47.826 6.84 0.00 34.36 3.72
764 1968 3.947834 CTCCATAATTTCTGGGTGTGTCC 59.052 47.826 6.84 0.00 34.36 4.02
909 2113 3.902881 TGTTTGCAACCCAGTGAATTT 57.097 38.095 0.00 0.00 0.00 1.82
917 2121 1.880027 ACCCAGTGAATTTCGTTGAGC 59.120 47.619 0.00 0.00 0.00 4.26
918 2122 1.879380 CCCAGTGAATTTCGTTGAGCA 59.121 47.619 0.00 0.00 0.00 4.26
919 2123 2.350772 CCCAGTGAATTTCGTTGAGCAC 60.351 50.000 0.00 0.00 0.00 4.40
920 2124 2.549754 CCAGTGAATTTCGTTGAGCACT 59.450 45.455 0.00 0.00 37.09 4.40
921 2125 3.745975 CCAGTGAATTTCGTTGAGCACTA 59.254 43.478 0.00 0.00 35.09 2.74
1203 2409 9.926158 GAGATCATCATCACACAGACTATATTT 57.074 33.333 0.00 0.00 0.00 1.40
1236 2442 3.539604 ACTGCAATGCCTCTCTATTCAC 58.460 45.455 1.53 0.00 0.00 3.18
1260 2466 7.978414 CACATAGATAACACACATGAGTTCTCT 59.022 37.037 0.00 10.74 36.56 3.10
1365 2571 0.987294 ACATCCTGGAGAAGTGTGGG 59.013 55.000 1.52 0.00 0.00 4.61
1530 2736 1.112113 GCCCCAAGATCGAGTCACTA 58.888 55.000 0.00 0.00 0.00 2.74
1590 2796 6.128282 CGCAGTCTACAATGGAATTAACAAGT 60.128 38.462 0.00 0.00 32.46 3.16
1611 2817 6.749923 AGTCATACCTTGAAAAGCATCTTC 57.250 37.500 0.00 0.00 44.44 2.87
1743 2949 7.065563 ACACTAAAGCATCTCAAGATTGATGAC 59.934 37.037 7.09 0.00 41.69 3.06
1779 2985 5.431731 ACATTTGGATATTGGGGAGAGTACA 59.568 40.000 0.00 0.00 0.00 2.90
2166 3372 3.575297 CGAAGAGCGCAAGATGTTG 57.425 52.632 11.47 0.00 40.28 3.33
2175 3381 1.269726 CGCAAGATGTTGGCAACCTTT 60.270 47.619 26.31 14.99 43.02 3.11
2187 3393 6.325286 TGTTGGCAACCTTTACCTCTTTTATT 59.675 34.615 26.31 0.00 0.00 1.40
2202 3408 7.939039 ACCTCTTTTATTGTTTGTCTCATGAGA 59.061 33.333 21.67 21.67 34.56 3.27
2270 3476 0.620556 AGGTCGAGTGGGCATTCATT 59.379 50.000 0.00 0.00 0.00 2.57
2281 3487 4.402155 GTGGGCATTCATTATCCTTGTTCA 59.598 41.667 0.00 0.00 0.00 3.18
2284 3490 5.450965 GGGCATTCATTATCCTTGTTCAGTG 60.451 44.000 0.00 0.00 0.00 3.66
2321 3527 3.907474 AGGTAATCTTTTGGGGGTTTTGG 59.093 43.478 0.00 0.00 0.00 3.28
2322 3528 3.904965 GGTAATCTTTTGGGGGTTTTGGA 59.095 43.478 0.00 0.00 0.00 3.53
2323 3529 4.262721 GGTAATCTTTTGGGGGTTTTGGAC 60.263 45.833 0.00 0.00 0.00 4.02
2326 3532 3.035363 TCTTTTGGGGGTTTTGGACTTC 58.965 45.455 0.00 0.00 0.00 3.01
2328 3534 0.468400 TTGGGGGTTTTGGACTTCGG 60.468 55.000 0.00 0.00 0.00 4.30
2341 3548 2.000447 GACTTCGGTGTATTCCAGCAC 59.000 52.381 0.00 0.00 41.76 4.40
2355 3562 0.388134 CAGCACAGCCTCATTGCAAC 60.388 55.000 0.00 0.00 38.81 4.17
2378 3585 8.348507 CAACTCTACTTTCTGCAATTTCTTTCT 58.651 33.333 0.00 0.00 0.00 2.52
2410 3617 9.638176 AAATGCCTTATAGAAATGTCTCATCTT 57.362 29.630 0.00 0.00 35.12 2.40
2528 3735 1.420138 TGAAGTCTTGGTTCCTCACCC 59.580 52.381 0.00 0.00 46.68 4.61
2543 3755 0.456824 CACCCGTCACATGAGTCGAG 60.457 60.000 10.87 0.90 0.00 4.04
2581 3793 5.278610 CCTTCAGAATCATGCTGTGTTGAAA 60.279 40.000 0.00 0.00 34.98 2.69
2780 3992 0.533531 CCTTGCGCATATCTGCCTCA 60.534 55.000 12.75 0.00 46.07 3.86
2785 3997 1.391485 GCGCATATCTGCCTCAATACG 59.609 52.381 0.30 0.00 46.07 3.06
2812 4024 4.207019 GCATTGTTTTGCGGTATAATCTGC 59.793 41.667 0.00 0.00 39.84 4.26
2823 4035 4.561105 GGTATAATCTGCTCACCTGTAGC 58.439 47.826 0.00 0.00 40.50 3.58
2833 4045 3.944015 GCTCACCTGTAGCATTCAGATTT 59.056 43.478 4.75 0.00 39.83 2.17
2886 4098 4.778534 CAACACATGCTTCCAGAGAATT 57.221 40.909 0.00 0.00 0.00 2.17
2887 4099 5.885230 CAACACATGCTTCCAGAGAATTA 57.115 39.130 0.00 0.00 0.00 1.40
2890 4102 5.564550 ACACATGCTTCCAGAGAATTAACT 58.435 37.500 0.00 0.00 0.00 2.24
2892 4104 7.168219 ACACATGCTTCCAGAGAATTAACTAA 58.832 34.615 0.00 0.00 0.00 2.24
2898 4110 7.057264 GCTTCCAGAGAATTAACTAATCCCTT 58.943 38.462 0.00 0.00 0.00 3.95
2899 4111 8.211629 GCTTCCAGAGAATTAACTAATCCCTTA 58.788 37.037 0.00 0.00 0.00 2.69
2936 4148 9.874215 CATGTCATAGCTAATTTGTTGATGTAG 57.126 33.333 0.00 0.00 0.00 2.74
2949 4161 6.552859 TGTTGATGTAGTAAATGGTGTGTG 57.447 37.500 0.00 0.00 0.00 3.82
2950 4162 6.058833 TGTTGATGTAGTAAATGGTGTGTGT 58.941 36.000 0.00 0.00 0.00 3.72
2951 4163 6.017523 TGTTGATGTAGTAAATGGTGTGTGTG 60.018 38.462 0.00 0.00 0.00 3.82
2952 4164 5.616270 TGATGTAGTAAATGGTGTGTGTGT 58.384 37.500 0.00 0.00 0.00 3.72
2953 4165 5.468409 TGATGTAGTAAATGGTGTGTGTGTG 59.532 40.000 0.00 0.00 0.00 3.82
2954 4166 4.771903 TGTAGTAAATGGTGTGTGTGTGT 58.228 39.130 0.00 0.00 0.00 3.72
2955 4167 4.572795 TGTAGTAAATGGTGTGTGTGTGTG 59.427 41.667 0.00 0.00 0.00 3.82
2956 4168 3.616219 AGTAAATGGTGTGTGTGTGTGT 58.384 40.909 0.00 0.00 0.00 3.72
2957 4169 2.937469 AAATGGTGTGTGTGTGTGTG 57.063 45.000 0.00 0.00 0.00 3.82
2958 4170 1.832883 AATGGTGTGTGTGTGTGTGT 58.167 45.000 0.00 0.00 0.00 3.72
2959 4171 1.093972 ATGGTGTGTGTGTGTGTGTG 58.906 50.000 0.00 0.00 0.00 3.82
2960 4172 0.250510 TGGTGTGTGTGTGTGTGTGT 60.251 50.000 0.00 0.00 0.00 3.72
2961 4173 0.167908 GGTGTGTGTGTGTGTGTGTG 59.832 55.000 0.00 0.00 0.00 3.82
2962 4174 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2963 4175 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2964 4176 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2965 4177 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2966 4178 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2967 4179 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2968 4180 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2969 4181 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2982 4194 4.564769 GTGTGTGTGTGTTTACCATTTTGG 59.435 41.667 0.00 0.00 45.02 3.28
3054 4266 8.311836 TGTAGACAAATACTACCCTTTGAAGAG 58.688 37.037 0.00 0.00 39.30 2.85
3086 4298 6.774673 AGTATCTGTCTATCCGAGATCTTGA 58.225 40.000 11.89 4.97 36.29 3.02
3089 4301 6.384258 TCTGTCTATCCGAGATCTTGAAAG 57.616 41.667 11.89 5.81 36.29 2.62
3195 4407 2.354821 GGTAAATCTTGCCCATGACGTC 59.645 50.000 9.11 9.11 0.00 4.34
3200 4412 1.066430 TCTTGCCCATGACGTCCTTAC 60.066 52.381 14.12 0.00 0.00 2.34
3204 4416 1.338769 GCCCATGACGTCCTTACACTT 60.339 52.381 14.12 0.00 0.00 3.16
3206 4418 2.028476 CCCATGACGTCCTTACACTTGA 60.028 50.000 14.12 0.00 0.00 3.02
3208 4420 3.306088 CCATGACGTCCTTACACTTGAGT 60.306 47.826 14.12 0.00 0.00 3.41
3256 4468 7.873739 ACTTTGTTTTAATGCTCAATGCTAC 57.126 32.000 0.00 0.00 43.37 3.58
3309 4521 8.367911 AGATGTTAGTCAGTTCAATCAGTGTAA 58.632 33.333 0.00 0.00 0.00 2.41
3310 4522 7.946655 TGTTAGTCAGTTCAATCAGTGTAAG 57.053 36.000 0.00 0.00 0.00 2.34
3359 4571 4.385199 GGGAGGGACATGACATACAATCAA 60.385 45.833 0.00 0.00 0.00 2.57
3394 4606 6.935741 TTTTAAGCTTTGACTAGTTCTGCA 57.064 33.333 3.20 0.00 0.00 4.41
3401 4613 6.486657 AGCTTTGACTAGTTCTGCATTTAACA 59.513 34.615 0.00 0.00 0.00 2.41
3403 4615 7.324616 GCTTTGACTAGTTCTGCATTTAACAAG 59.675 37.037 0.00 4.63 0.00 3.16
3410 4622 5.594317 AGTTCTGCATTTAACAAGTCCACTT 59.406 36.000 8.79 0.00 36.45 3.16
3425 4637 6.374417 AGTCCACTTCAGTTTACCATATGT 57.626 37.500 1.24 0.00 0.00 2.29
3426 4638 6.173339 AGTCCACTTCAGTTTACCATATGTG 58.827 40.000 1.24 0.00 0.00 3.21
3439 4651 9.162764 GTTTACCATATGTGAAGATGTACAACT 57.837 33.333 0.00 0.00 0.00 3.16
3497 4709 5.789521 TCTGATTTTCCATGTCGTGAACTA 58.210 37.500 0.00 0.00 0.00 2.24
3562 4774 2.938451 CGGCAATCTGCTCAGTTTATGA 59.062 45.455 0.00 0.00 44.28 2.15
3576 4813 8.285394 GCTCAGTTTATGATTACACATACATGG 58.715 37.037 0.00 0.00 37.28 3.66
3580 4817 9.342308 AGTTTATGATTACACATACATGGAAGG 57.658 33.333 0.00 0.00 33.31 3.46
3581 4818 9.120538 GTTTATGATTACACATACATGGAAGGT 57.879 33.333 0.00 0.00 33.31 3.50
3584 4821 6.826668 TGATTACACATACATGGAAGGTAGG 58.173 40.000 0.00 0.00 41.08 3.18
3585 4822 5.623956 TTACACATACATGGAAGGTAGGG 57.376 43.478 0.00 0.00 39.43 3.53
3586 4823 3.460825 ACACATACATGGAAGGTAGGGT 58.539 45.455 0.00 0.00 39.43 4.34
3587 4824 3.199946 ACACATACATGGAAGGTAGGGTG 59.800 47.826 0.00 0.00 39.43 4.61
3588 4825 3.454447 CACATACATGGAAGGTAGGGTGA 59.546 47.826 0.00 0.00 39.43 4.02
3589 4826 3.711704 ACATACATGGAAGGTAGGGTGAG 59.288 47.826 0.00 0.00 39.43 3.51
3590 4827 0.912486 ACATGGAAGGTAGGGTGAGC 59.088 55.000 0.00 0.00 0.00 4.26
3593 4830 0.690762 TGGAAGGTAGGGTGAGCAAC 59.309 55.000 0.00 0.00 0.00 4.17
3614 4851 4.408182 CCAGAAGGTAGGGTGAATACTG 57.592 50.000 0.00 0.00 0.00 2.74
3615 4852 4.030913 CCAGAAGGTAGGGTGAATACTGA 58.969 47.826 0.00 0.00 0.00 3.41
3618 4855 4.712337 AGAAGGTAGGGTGAATACTGACAG 59.288 45.833 0.00 0.00 0.00 3.51
3619 4856 4.332683 AGGTAGGGTGAATACTGACAGA 57.667 45.455 10.08 0.00 0.00 3.41
3620 4857 4.024670 AGGTAGGGTGAATACTGACAGAC 58.975 47.826 10.08 0.00 0.00 3.51
3621 4858 3.767673 GGTAGGGTGAATACTGACAGACA 59.232 47.826 10.08 1.23 0.00 3.41
3622 4859 3.963428 AGGGTGAATACTGACAGACAC 57.037 47.619 10.08 12.49 0.00 3.67
3623 4860 3.511477 AGGGTGAATACTGACAGACACT 58.489 45.455 10.08 0.00 0.00 3.55
3626 4863 3.306364 GGTGAATACTGACAGACACTGCT 60.306 47.826 10.08 0.00 34.37 4.24
3627 4864 4.310769 GTGAATACTGACAGACACTGCTT 58.689 43.478 10.08 0.00 34.37 3.91
3628 4865 4.752101 GTGAATACTGACAGACACTGCTTT 59.248 41.667 10.08 0.00 34.37 3.51
3629 4866 5.926542 GTGAATACTGACAGACACTGCTTTA 59.073 40.000 10.08 0.00 34.37 1.85
3631 4868 6.989759 TGAATACTGACAGACACTGCTTTAAA 59.010 34.615 10.08 0.00 34.37 1.52
3632 4869 6.787085 ATACTGACAGACACTGCTTTAAAC 57.213 37.500 10.08 0.00 34.37 2.01
3633 4870 4.770795 ACTGACAGACACTGCTTTAAACT 58.229 39.130 10.08 0.00 34.37 2.66
3635 4872 4.765273 TGACAGACACTGCTTTAAACTGA 58.235 39.130 0.00 0.00 34.37 3.41
3636 4873 5.182487 TGACAGACACTGCTTTAAACTGAA 58.818 37.500 0.00 0.00 34.37 3.02
3637 4874 5.822519 TGACAGACACTGCTTTAAACTGAAT 59.177 36.000 0.00 0.00 34.37 2.57
3639 4876 7.661437 TGACAGACACTGCTTTAAACTGAATAT 59.339 33.333 0.00 0.00 34.37 1.28
3640 4877 9.151471 GACAGACACTGCTTTAAACTGAATATA 57.849 33.333 0.00 0.00 34.37 0.86
3643 4880 9.944376 AGACACTGCTTTAAACTGAATATAAGA 57.056 29.630 0.00 0.00 0.00 2.10
3672 4909 6.117911 TGTATTTGGTCATTTGATGCTACG 57.882 37.500 0.00 0.00 0.00 3.51
3673 4910 4.637483 ATTTGGTCATTTGATGCTACGG 57.363 40.909 0.00 0.00 0.00 4.02
3675 4912 3.897141 TGGTCATTTGATGCTACGGTA 57.103 42.857 0.00 0.00 0.00 4.02
3676 4913 4.415881 TGGTCATTTGATGCTACGGTAT 57.584 40.909 0.00 0.00 0.00 2.73
3677 4914 4.377021 TGGTCATTTGATGCTACGGTATC 58.623 43.478 0.00 0.00 35.57 2.24
3679 4916 5.057149 GGTCATTTGATGCTACGGTATCTT 58.943 41.667 0.00 0.00 35.92 2.40
3680 4917 5.050091 GGTCATTTGATGCTACGGTATCTTG 60.050 44.000 0.00 0.00 35.92 3.02
3683 4920 3.819564 TGATGCTACGGTATCTTGCTT 57.180 42.857 0.00 0.00 35.92 3.91
3684 4921 4.929819 TGATGCTACGGTATCTTGCTTA 57.070 40.909 0.00 0.00 35.92 3.09
3685 4922 5.270893 TGATGCTACGGTATCTTGCTTAA 57.729 39.130 0.00 0.00 35.92 1.85
3688 4925 4.430007 TGCTACGGTATCTTGCTTAACAG 58.570 43.478 0.00 0.00 0.00 3.16
3689 4926 4.158949 TGCTACGGTATCTTGCTTAACAGA 59.841 41.667 0.00 0.00 0.00 3.41
3691 4928 4.530710 ACGGTATCTTGCTTAACAGACA 57.469 40.909 0.00 0.00 0.00 3.41
3835 5164 7.594351 TTGCTGTATTTGGGATGCAATATTA 57.406 32.000 0.00 0.00 35.83 0.98
3837 5166 6.209192 TGCTGTATTTGGGATGCAATATTAGG 59.791 38.462 0.00 0.00 0.00 2.69
3860 5189 7.852263 AGGTTTATGGTATCTAGTCCATATGC 58.148 38.462 17.59 14.35 43.40 3.14
3862 5191 7.321153 GTTTATGGTATCTAGTCCATATGCGT 58.679 38.462 17.59 0.00 43.40 5.24
3868 5197 2.294512 TCTAGTCCATATGCGTCTGCTG 59.705 50.000 0.00 0.00 43.34 4.41
3886 5215 4.676546 TGCTGTCAACTCTGATAAGATCG 58.323 43.478 0.00 0.00 33.05 3.69
3909 5238 2.024590 GCTTTGCATGGCCCAGGATC 62.025 60.000 0.00 0.00 0.00 3.36
3950 5282 4.320494 GGCTTTGTCTAACCTGTGAATGTG 60.320 45.833 0.00 0.00 0.00 3.21
3960 5292 0.036105 TGTGAATGTGCTCGATGGCT 60.036 50.000 0.00 0.00 0.00 4.75
4002 5334 4.341235 AGCTTCTATACTGTCCGTGCAATA 59.659 41.667 0.00 0.00 0.00 1.90
4008 5340 3.955650 ACTGTCCGTGCAATAGTAAGT 57.044 42.857 0.00 0.00 0.00 2.24
4058 5550 5.900425 CTCTTCTTGAGCAGCTCACTAATA 58.100 41.667 25.37 12.86 40.46 0.98
4059 5551 6.477053 TCTTCTTGAGCAGCTCACTAATAT 57.523 37.500 25.37 0.00 40.46 1.28
4209 6001 9.005777 GTTAAGGTAAAGTGTCATTTGGATGTA 57.994 33.333 0.00 0.00 34.77 2.29
4255 6047 4.649088 AGCATAGTCACGTGCATAGTTA 57.351 40.909 11.67 0.00 43.63 2.24
4256 6048 5.201713 AGCATAGTCACGTGCATAGTTAT 57.798 39.130 11.67 0.00 43.63 1.89
4281 6073 3.207265 TGCACGCCCAAAGATATATGT 57.793 42.857 0.00 0.00 0.00 2.29
4282 6074 4.344359 TGCACGCCCAAAGATATATGTA 57.656 40.909 0.00 0.00 0.00 2.29
4312 6104 9.295825 TGTAATGTTATTGTTTCAAGGAGATGT 57.704 29.630 0.00 0.00 0.00 3.06
4321 6113 5.592282 TGTTTCAAGGAGATGTGCTGTTTTA 59.408 36.000 0.00 0.00 0.00 1.52
4350 6142 5.361857 AGAATGACATTGGGAATTGATCACC 59.638 40.000 5.14 0.00 0.00 4.02
4427 6219 8.243426 TCTACTTTTGTGAACAATCAATATGCC 58.757 33.333 0.00 0.00 37.30 4.40
4519 6311 5.470098 TGAAGCACTGATTCTGTAAGGAAAC 59.530 40.000 8.44 0.00 0.00 2.78
4538 6330 1.358759 GGTGGCAGACAAACCAACG 59.641 57.895 0.00 0.00 37.79 4.10
4554 6346 7.488792 ACAAACCAACGTTATCTTGTTTTTACC 59.511 33.333 0.00 0.00 0.00 2.85
4610 6402 5.650283 AGCCTAGATCTCTTATTACTGCCT 58.350 41.667 0.00 0.00 0.00 4.75
4670 6462 1.127343 ACCTGGAATCTAGCAGCTCC 58.873 55.000 0.00 0.00 0.00 4.70
4757 6550 8.519492 TGCTTTCTTATGATTTTTGTAGCAAC 57.481 30.769 0.00 0.00 32.58 4.17
4768 6561 6.403866 TTTTTGTAGCAACATCACCTCATT 57.596 33.333 0.00 0.00 34.97 2.57
4866 6659 3.007074 AGAGCCTCTATCATCATGCAGTG 59.993 47.826 0.00 0.00 0.00 3.66
4950 6744 9.020731 TCCTACTTCATGACGAGCATATATTTA 57.979 33.333 6.16 0.00 34.82 1.40
4969 6763 6.906157 ATTTATATAATTGGCAGCTGCTGT 57.094 33.333 35.82 20.07 41.70 4.40
4970 6764 9.685276 ATATTTATATAATTGGCAGCTGCTGTA 57.315 29.630 35.82 21.94 41.70 2.74
4971 6765 6.801539 TTATATAATTGGCAGCTGCTGTAC 57.198 37.500 35.82 20.88 41.70 2.90
4973 6767 0.251297 AATTGGCAGCTGCTGTACCA 60.251 50.000 35.82 24.28 41.70 3.25
4974 6768 0.962356 ATTGGCAGCTGCTGTACCAC 60.962 55.000 35.82 19.05 41.70 4.16
5014 6809 3.055530 AGCTTGAGACCACCTATTCACAG 60.056 47.826 0.00 0.00 0.00 3.66
5066 6864 2.884087 ATAGCACGGACGGCAGAACG 62.884 60.000 0.00 0.00 40.31 3.95
5073 6871 2.507102 ACGGCAGAACGAGATGCG 60.507 61.111 0.00 0.00 43.49 4.73
5081 6879 2.932614 CAGAACGAGATGCGATTCCTTT 59.067 45.455 0.00 0.00 44.57 3.11
5105 6903 1.491668 GAGAAACCCTCTCCCTCTCC 58.508 60.000 0.00 0.00 44.39 3.71
5315 7115 2.965831 TCTCCTCAGAAATGGGTATCCG 59.034 50.000 0.00 0.00 35.24 4.18
5318 7118 2.485479 CCTCAGAAATGGGTATCCGGTG 60.485 54.545 0.00 0.00 35.24 4.94
5340 7140 1.269448 CCGCTGTGCCACTTTTTATGT 59.731 47.619 0.00 0.00 0.00 2.29
5423 7224 5.435686 TCACCCAAGCTGAGTGTTATAAT 57.564 39.130 9.96 0.00 33.21 1.28
5425 7226 6.346096 TCACCCAAGCTGAGTGTTATAATAC 58.654 40.000 4.29 4.29 33.21 1.89
5459 7270 6.404708 GCATCTCTGCTATTATTCCATCTGA 58.595 40.000 0.00 0.00 45.32 3.27
5460 7271 6.877855 GCATCTCTGCTATTATTCCATCTGAA 59.122 38.462 0.00 0.00 45.32 3.02
5465 7276 9.770097 CTCTGCTATTATTCCATCTGAACTTAA 57.230 33.333 0.00 0.00 35.31 1.85
5529 7341 0.179275 CGCGGCGATCATATCAAACG 60.179 55.000 19.16 0.00 0.00 3.60
5574 7386 6.801862 CCAAATCGACATTCCTTTCTGTAAAC 59.198 38.462 0.00 0.00 0.00 2.01
5586 7398 1.414919 TCTGTAAACACGGCTCCACTT 59.585 47.619 0.00 0.00 0.00 3.16
5610 7422 3.882888 CCATATGCGCTTTCCCTTTCTTA 59.117 43.478 9.73 0.00 0.00 2.10
5611 7423 4.520492 CCATATGCGCTTTCCCTTTCTTAT 59.480 41.667 9.73 0.00 0.00 1.73
5612 7424 5.705441 CCATATGCGCTTTCCCTTTCTTATA 59.295 40.000 9.73 0.00 0.00 0.98
5613 7425 6.128172 CCATATGCGCTTTCCCTTTCTTATAG 60.128 42.308 9.73 0.00 0.00 1.31
5614 7426 4.216411 TGCGCTTTCCCTTTCTTATAGT 57.784 40.909 9.73 0.00 0.00 2.12
5638 7450 8.815912 AGTATTAACAAAATGAAGGGCTGATTT 58.184 29.630 0.00 0.00 0.00 2.17
5733 7552 2.437200 TTTCTTTTGGCGGCATCAAG 57.563 45.000 14.32 17.86 0.00 3.02
5747 7566 1.068748 CATCAAGTGTCTGCTTGCACC 60.069 52.381 0.00 0.00 43.92 5.01
5763 7582 5.624159 CTTGCACCCCTTCATATCTTCATA 58.376 41.667 0.00 0.00 0.00 2.15
5768 7587 8.224025 TGCACCCCTTCATATCTTCATATTTTA 58.776 33.333 0.00 0.00 0.00 1.52
5769 7588 9.077885 GCACCCCTTCATATCTTCATATTTTAA 57.922 33.333 0.00 0.00 0.00 1.52
5776 7595 9.866655 TTCATATCTTCATATTTTAAGTGCCCT 57.133 29.630 0.00 0.00 0.00 5.19
5777 7596 9.866655 TCATATCTTCATATTTTAAGTGCCCTT 57.133 29.630 0.00 0.00 34.56 3.95
5779 7598 9.866655 ATATCTTCATATTTTAAGTGCCCTTCA 57.133 29.630 0.00 0.00 31.89 3.02
5780 7599 8.773033 ATCTTCATATTTTAAGTGCCCTTCAT 57.227 30.769 0.00 0.00 31.89 2.57
5781 7600 9.866655 ATCTTCATATTTTAAGTGCCCTTCATA 57.133 29.630 0.00 0.00 31.89 2.15
5782 7601 9.866655 TCTTCATATTTTAAGTGCCCTTCATAT 57.133 29.630 0.00 0.00 31.89 1.78
5784 7603 9.866655 TTCATATTTTAAGTGCCCTTCATATCT 57.133 29.630 0.00 0.00 31.89 1.98
5785 7604 9.866655 TCATATTTTAAGTGCCCTTCATATCTT 57.133 29.630 0.00 0.00 31.89 2.40
5787 7606 9.866655 ATATTTTAAGTGCCCTTCATATCTTCA 57.133 29.630 0.00 0.00 31.89 3.02
5788 7607 8.773033 ATTTTAAGTGCCCTTCATATCTTCAT 57.227 30.769 0.00 0.00 31.89 2.57
5789 7608 9.866655 ATTTTAAGTGCCCTTCATATCTTCATA 57.133 29.630 0.00 0.00 31.89 2.15
5790 7609 9.866655 TTTTAAGTGCCCTTCATATCTTCATAT 57.133 29.630 0.00 0.00 31.89 1.78
5791 7610 9.866655 TTTAAGTGCCCTTCATATCTTCATATT 57.133 29.630 0.00 0.00 31.89 1.28
5814 7633 8.731591 ATTTTAATGGCCCTTCATATCTTCAT 57.268 30.769 0.00 0.00 0.00 2.57
5847 7670 5.198207 ACTAACAATTGGGTGGTTATAGGC 58.802 41.667 10.83 0.00 0.00 3.93
5881 7704 1.014352 AGCCAAACGTATCCGAATGC 58.986 50.000 0.00 0.00 37.88 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.905604 AATGAACAGTCGTCTTTATTGATGA 57.094 32.000 0.00 0.00 0.00 2.92
1 2 8.955061 AAAATGAACAGTCGTCTTTATTGATG 57.045 30.769 0.00 0.00 0.00 3.07
8 9 8.388103 CGGATATAAAAATGAACAGTCGTCTTT 58.612 33.333 0.00 0.00 0.00 2.52
9 10 7.548075 ACGGATATAAAAATGAACAGTCGTCTT 59.452 33.333 0.00 0.00 0.00 3.01
10 11 7.010183 CACGGATATAAAAATGAACAGTCGTCT 59.990 37.037 0.00 0.00 0.00 4.18
11 12 7.117454 CACGGATATAAAAATGAACAGTCGTC 58.883 38.462 0.00 0.00 0.00 4.20
23 24 3.064271 GGCAAGACGCACGGATATAAAAA 59.936 43.478 0.00 0.00 45.17 1.94
29 30 1.141019 GAGGCAAGACGCACGGATA 59.859 57.895 0.00 0.00 45.17 2.59
33 34 3.114616 CTGGAGGCAAGACGCACG 61.115 66.667 0.00 0.00 45.17 5.34
58 59 8.726988 GCTCTCAGGTGTTGTTTTAACATAATA 58.273 33.333 0.00 0.00 38.95 0.98
59 60 7.573096 CGCTCTCAGGTGTTGTTTTAACATAAT 60.573 37.037 0.00 0.00 38.95 1.28
79 80 4.037446 ACAGGATCTTGATCTTACGCTCTC 59.963 45.833 12.40 0.00 0.00 3.20
110 111 2.111043 CCGAGCACACACACCCTT 59.889 61.111 0.00 0.00 0.00 3.95
111 112 3.941188 CCCGAGCACACACACCCT 61.941 66.667 0.00 0.00 0.00 4.34
112 113 3.254024 ATCCCGAGCACACACACCC 62.254 63.158 0.00 0.00 0.00 4.61
113 114 2.034879 CATCCCGAGCACACACACC 61.035 63.158 0.00 0.00 0.00 4.16
130 1321 9.921637 CACCCTTAATAAATTCTAAAAAGTGCA 57.078 29.630 0.00 0.00 0.00 4.57
159 1350 3.195396 ACGTATGCCCGTCTAGGTAAAAA 59.805 43.478 0.00 0.00 35.95 1.94
170 1361 0.669318 CAGACAACACGTATGCCCGT 60.669 55.000 0.00 0.00 42.87 5.28
187 1378 0.617413 AGGAACAGGTCATCAGCCAG 59.383 55.000 0.00 0.00 0.00 4.85
189 1380 0.615331 TCAGGAACAGGTCATCAGCC 59.385 55.000 0.00 0.00 0.00 4.85
199 1390 3.664107 TCCGTCTTTCATTCAGGAACAG 58.336 45.455 0.00 0.00 0.00 3.16
260 1452 1.129437 GTTGATGGAAGCGTCTCAAGC 59.871 52.381 4.89 0.00 0.00 4.01
265 1457 0.674895 GGCAGTTGATGGAAGCGTCT 60.675 55.000 0.00 0.00 0.00 4.18
476 1675 2.548295 GCAACGACGGGCTTGGAAA 61.548 57.895 0.00 0.00 0.00 3.13
535 1734 1.938861 CGCCGTAATCGATTTGGGG 59.061 57.895 22.77 22.77 39.71 4.96
537 1736 1.083657 CGCGCCGTAATCGATTTGG 60.084 57.895 17.19 18.61 39.71 3.28
579 1782 2.277072 CTCCTCCTCTCTCCCGCA 59.723 66.667 0.00 0.00 0.00 5.69
690 1894 6.446318 TGAAAACATGCTCATACCTCAAAAC 58.554 36.000 0.00 0.00 0.00 2.43
762 1966 1.806461 GCGGATCTAGATGGCACGGA 61.806 60.000 10.74 0.00 0.00 4.69
764 1968 1.373497 GGCGGATCTAGATGGCACG 60.373 63.158 20.90 15.47 0.00 5.34
909 2113 4.514781 ACACAAGTATAGTGCTCAACGA 57.485 40.909 0.00 0.00 40.59 3.85
917 2121 7.360353 CCAATCACAGTCAACACAAGTATAGTG 60.360 40.741 0.00 0.00 42.56 2.74
918 2122 6.650807 CCAATCACAGTCAACACAAGTATAGT 59.349 38.462 0.00 0.00 0.00 2.12
919 2123 6.092670 CCCAATCACAGTCAACACAAGTATAG 59.907 42.308 0.00 0.00 0.00 1.31
920 2124 5.937540 CCCAATCACAGTCAACACAAGTATA 59.062 40.000 0.00 0.00 0.00 1.47
921 2125 4.761739 CCCAATCACAGTCAACACAAGTAT 59.238 41.667 0.00 0.00 0.00 2.12
961 2165 9.675464 ATTGATGTCCAATTTTATCAGCAAAAT 57.325 25.926 0.00 0.00 42.55 1.82
1017 2223 4.082026 GCAAGGATGTTGCCAATAACTTCT 60.082 41.667 0.00 0.00 39.38 2.85
1203 2409 0.904649 ATTGCAGTCCCATCGTCTGA 59.095 50.000 0.00 0.00 0.00 3.27
1236 2442 7.042858 GCAGAGAACTCATGTGTGTTATCTATG 60.043 40.741 18.76 15.92 43.68 2.23
1260 2466 0.896479 ATGCAATCACAGGTGCTGCA 60.896 50.000 22.47 22.47 45.89 4.41
1365 2571 0.972883 ACACCTCCAGCTTCTGTCTC 59.027 55.000 0.00 0.00 0.00 3.36
1590 2796 5.245531 ACGAAGATGCTTTTCAAGGTATGA 58.754 37.500 0.00 0.00 35.85 2.15
1611 2817 1.331138 TCCACGCCAACTGTTTTTACG 59.669 47.619 0.00 0.00 0.00 3.18
1779 2985 2.837947 TCCACAACCTCCAGATGATCT 58.162 47.619 0.00 0.00 0.00 2.75
2166 3372 6.340962 ACAATAAAAGAGGTAAAGGTTGCC 57.659 37.500 0.00 0.00 35.41 4.52
2175 3381 9.219603 CTCATGAGACAAACAATAAAAGAGGTA 57.780 33.333 18.34 0.00 0.00 3.08
2187 3393 6.073058 GCACATACTTTCTCATGAGACAAACA 60.073 38.462 25.07 7.46 37.14 2.83
2202 3408 3.119388 GCACATCCACATGCACATACTTT 60.119 43.478 0.00 0.00 41.65 2.66
2270 3476 4.623932 AGAGTTGCACTGAACAAGGATA 57.376 40.909 0.00 0.00 0.00 2.59
2295 3501 4.692523 ACCCCCAAAAGATTACCTGATT 57.307 40.909 0.00 0.00 0.00 2.57
2321 3527 2.000447 GTGCTGGAATACACCGAAGTC 59.000 52.381 0.00 0.00 0.00 3.01
2322 3528 1.346395 TGTGCTGGAATACACCGAAGT 59.654 47.619 0.00 0.00 35.90 3.01
2323 3529 2.002586 CTGTGCTGGAATACACCGAAG 58.997 52.381 0.00 0.00 35.90 3.79
2326 3532 1.369091 GGCTGTGCTGGAATACACCG 61.369 60.000 0.00 0.00 35.90 4.94
2328 3534 1.339055 TGAGGCTGTGCTGGAATACAC 60.339 52.381 0.00 0.00 37.31 2.90
2341 3548 2.983229 AGTAGAGTTGCAATGAGGCTG 58.017 47.619 0.59 0.00 34.04 4.85
2355 3562 9.741647 AAAAGAAAGAAATTGCAGAAAGTAGAG 57.258 29.630 0.00 0.00 0.00 2.43
2402 3609 4.160439 ACACGAAGATAGCCAAAGATGAGA 59.840 41.667 0.00 0.00 0.00 3.27
2410 3617 9.391006 AGATTAATTTTACACGAAGATAGCCAA 57.609 29.630 0.00 0.00 0.00 4.52
2528 3735 2.347697 TTTCCTCGACTCATGTGACG 57.652 50.000 12.30 12.30 0.00 4.35
2543 3755 5.592104 TTCTGAAGGTTCCAAAGTTTTCC 57.408 39.130 0.00 0.00 0.00 3.13
2597 3809 9.545105 CCGGTTATGTTGTACCTATTTGTAATA 57.455 33.333 0.00 0.00 32.08 0.98
2598 3810 7.012610 GCCGGTTATGTTGTACCTATTTGTAAT 59.987 37.037 1.90 0.00 32.08 1.89
2639 3851 7.646548 ACAGCTACAACTATATCACTCTCAA 57.353 36.000 0.00 0.00 0.00 3.02
2780 3992 2.415357 CGCAAAACAATGCCCTCGTATT 60.415 45.455 0.00 0.00 43.47 1.89
2785 3997 0.885196 TACCGCAAAACAATGCCCTC 59.115 50.000 0.00 0.00 43.47 4.30
2812 4024 4.940046 ACAAATCTGAATGCTACAGGTGAG 59.060 41.667 0.00 0.00 36.22 3.51
2823 4035 8.671028 TCATGAGACACAATACAAATCTGAATG 58.329 33.333 0.00 0.00 0.00 2.67
2919 4131 9.289303 CACCATTTACTACATCAACAAATTAGC 57.711 33.333 0.00 0.00 0.00 3.09
2936 4148 3.127895 ACACACACACACACACCATTTAC 59.872 43.478 0.00 0.00 0.00 2.01
2939 4151 1.472082 CACACACACACACACACCATT 59.528 47.619 0.00 0.00 0.00 3.16
2946 4158 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2947 4159 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2949 4161 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2950 4162 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2951 4163 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2952 4164 1.598882 AACACACACACACACACACA 58.401 45.000 0.00 0.00 0.00 3.72
2953 4165 2.697431 AAACACACACACACACACAC 57.303 45.000 0.00 0.00 0.00 3.82
2954 4166 2.484651 GGTAAACACACACACACACACA 59.515 45.455 0.00 0.00 0.00 3.72
2955 4167 2.484651 TGGTAAACACACACACACACAC 59.515 45.455 0.00 0.00 0.00 3.82
2956 4168 2.779506 TGGTAAACACACACACACACA 58.220 42.857 0.00 0.00 0.00 3.72
2957 4169 4.364415 AATGGTAAACACACACACACAC 57.636 40.909 0.00 0.00 0.00 3.82
2958 4170 5.164233 CAAAATGGTAAACACACACACACA 58.836 37.500 0.00 0.00 0.00 3.72
2959 4171 4.564769 CCAAAATGGTAAACACACACACAC 59.435 41.667 0.00 0.00 31.35 3.82
2960 4172 4.462834 TCCAAAATGGTAAACACACACACA 59.537 37.500 0.00 0.00 39.03 3.72
2961 4173 5.000012 TCCAAAATGGTAAACACACACAC 58.000 39.130 0.00 0.00 39.03 3.82
2962 4174 4.950475 TCTCCAAAATGGTAAACACACACA 59.050 37.500 0.00 0.00 39.03 3.72
2963 4175 5.508200 TCTCCAAAATGGTAAACACACAC 57.492 39.130 0.00 0.00 39.03 3.82
2964 4176 7.825331 TTATCTCCAAAATGGTAAACACACA 57.175 32.000 0.00 0.00 39.03 3.72
2965 4177 9.191995 CTTTTATCTCCAAAATGGTAAACACAC 57.808 33.333 0.00 0.00 39.03 3.82
2966 4178 9.137459 TCTTTTATCTCCAAAATGGTAAACACA 57.863 29.630 0.00 0.00 39.03 3.72
2967 4179 9.974980 TTCTTTTATCTCCAAAATGGTAAACAC 57.025 29.630 0.00 0.00 39.03 3.32
3028 4240 8.197592 TCTTCAAAGGGTAGTATTTGTCTACA 57.802 34.615 0.00 0.00 39.36 2.74
3054 4266 7.389330 TCTCGGATAGACAGATACTTTCTCATC 59.611 40.741 0.00 0.00 29.93 2.92
3086 4298 7.197071 TCAGCACGTAATTACATCAAACTTT 57.803 32.000 15.67 0.00 0.00 2.66
3089 4301 7.680982 TGTATCAGCACGTAATTACATCAAAC 58.319 34.615 15.67 4.04 0.00 2.93
3140 4352 4.801147 CATAAGTGCATGCGTACTGAAT 57.199 40.909 14.09 6.80 38.20 2.57
3195 4407 7.873910 GCTAGTATAGGTACTCAAGTGTAAGG 58.126 42.308 0.00 0.00 41.35 2.69
3256 4468 1.457079 CCCTCTACCCCTACCGGTG 60.457 68.421 19.93 7.24 36.56 4.94
3267 4479 7.501844 ACTAACATCTATTCAAAGCCCTCTAC 58.498 38.462 0.00 0.00 0.00 2.59
3268 4480 7.344612 TGACTAACATCTATTCAAAGCCCTCTA 59.655 37.037 0.00 0.00 0.00 2.43
3309 4521 5.356470 GGCTCTTCTGTGATAAAAATCAGCT 59.644 40.000 0.00 0.00 0.00 4.24
3310 4522 5.356470 AGGCTCTTCTGTGATAAAAATCAGC 59.644 40.000 0.00 0.00 0.00 4.26
3374 4586 8.504005 GTTAAATGCAGAACTAGTCAAAGCTTA 58.496 33.333 0.00 0.00 0.00 3.09
3394 4606 7.558444 TGGTAAACTGAAGTGGACTTGTTAAAT 59.442 33.333 0.00 0.00 36.11 1.40
3401 4613 6.655003 CACATATGGTAAACTGAAGTGGACTT 59.345 38.462 7.80 0.00 39.23 3.01
3403 4615 6.170506 TCACATATGGTAAACTGAAGTGGAC 58.829 40.000 7.80 0.00 0.00 4.02
3410 4622 8.536175 TGTACATCTTCACATATGGTAAACTGA 58.464 33.333 7.80 0.00 0.00 3.41
3425 4637 8.958119 ACTTTGAAAGTAGTTGTACATCTTCA 57.042 30.769 9.13 6.82 40.69 3.02
3439 4651 8.962679 TCTAAAGCTCCAAAAACTTTGAAAGTA 58.037 29.630 11.43 0.00 41.91 2.24
3562 4774 5.670361 ACCCTACCTTCCATGTATGTGTAAT 59.330 40.000 0.00 0.00 0.00 1.89
3576 4813 0.690762 TGGTTGCTCACCCTACCTTC 59.309 55.000 3.46 0.00 46.68 3.46
3579 4816 0.690762 TTCTGGTTGCTCACCCTACC 59.309 55.000 3.46 0.00 46.68 3.18
3580 4817 1.339151 CCTTCTGGTTGCTCACCCTAC 60.339 57.143 3.46 0.00 46.68 3.18
3581 4818 0.984230 CCTTCTGGTTGCTCACCCTA 59.016 55.000 3.46 0.00 46.68 3.53
3584 4821 1.339151 CCTACCTTCTGGTTGCTCACC 60.339 57.143 0.00 0.00 46.05 4.02
3585 4822 1.339151 CCCTACCTTCTGGTTGCTCAC 60.339 57.143 0.00 0.00 46.05 3.51
3586 4823 0.984230 CCCTACCTTCTGGTTGCTCA 59.016 55.000 0.00 0.00 46.05 4.26
3587 4824 0.984995 ACCCTACCTTCTGGTTGCTC 59.015 55.000 0.00 0.00 46.05 4.26
3588 4825 0.693049 CACCCTACCTTCTGGTTGCT 59.307 55.000 0.00 0.00 46.05 3.91
3589 4826 0.690762 TCACCCTACCTTCTGGTTGC 59.309 55.000 0.00 0.00 46.05 4.17
3590 4827 3.721087 ATTCACCCTACCTTCTGGTTG 57.279 47.619 0.00 0.00 46.05 3.77
3593 4830 4.030913 TCAGTATTCACCCTACCTTCTGG 58.969 47.826 0.00 0.00 39.83 3.86
3594 4831 4.466370 TGTCAGTATTCACCCTACCTTCTG 59.534 45.833 0.00 0.00 0.00 3.02
3595 4832 4.684724 TGTCAGTATTCACCCTACCTTCT 58.315 43.478 0.00 0.00 0.00 2.85
3596 4833 4.710375 TCTGTCAGTATTCACCCTACCTTC 59.290 45.833 0.00 0.00 0.00 3.46
3597 4834 4.466726 GTCTGTCAGTATTCACCCTACCTT 59.533 45.833 0.00 0.00 0.00 3.50
3598 4835 4.024670 GTCTGTCAGTATTCACCCTACCT 58.975 47.826 0.00 0.00 0.00 3.08
3599 4836 3.767673 TGTCTGTCAGTATTCACCCTACC 59.232 47.826 0.00 0.00 0.00 3.18
3600 4837 4.463186 AGTGTCTGTCAGTATTCACCCTAC 59.537 45.833 0.00 0.00 0.00 3.18
3601 4838 4.462834 CAGTGTCTGTCAGTATTCACCCTA 59.537 45.833 0.00 0.00 0.00 3.53
3602 4839 3.259374 CAGTGTCTGTCAGTATTCACCCT 59.741 47.826 0.00 0.00 0.00 4.34
3603 4840 3.589988 CAGTGTCTGTCAGTATTCACCC 58.410 50.000 0.00 0.00 0.00 4.61
3605 4842 3.919216 AGCAGTGTCTGTCAGTATTCAC 58.081 45.455 0.00 6.05 33.43 3.18
3606 4843 4.607293 AAGCAGTGTCTGTCAGTATTCA 57.393 40.909 0.00 0.00 33.43 2.57
3607 4844 7.171678 AGTTTAAAGCAGTGTCTGTCAGTATTC 59.828 37.037 0.00 0.00 33.43 1.75
3609 4846 6.425114 CAGTTTAAAGCAGTGTCTGTCAGTAT 59.575 38.462 0.00 0.00 33.43 2.12
3610 4847 5.753438 CAGTTTAAAGCAGTGTCTGTCAGTA 59.247 40.000 0.00 0.00 33.43 2.74
3611 4848 4.572389 CAGTTTAAAGCAGTGTCTGTCAGT 59.428 41.667 0.00 0.00 33.43 3.41
3612 4849 4.811024 TCAGTTTAAAGCAGTGTCTGTCAG 59.189 41.667 0.00 0.00 33.43 3.51
3614 4851 5.734855 TTCAGTTTAAAGCAGTGTCTGTC 57.265 39.130 0.00 0.00 33.43 3.51
3615 4852 7.986085 ATATTCAGTTTAAAGCAGTGTCTGT 57.014 32.000 0.00 0.00 33.43 3.41
3646 4883 8.341903 CGTAGCATCAAATGACCAAATACAATA 58.658 33.333 0.00 0.00 0.00 1.90
3648 4885 6.404184 CCGTAGCATCAAATGACCAAATACAA 60.404 38.462 0.00 0.00 0.00 2.41
3649 4886 5.065859 CCGTAGCATCAAATGACCAAATACA 59.934 40.000 0.00 0.00 0.00 2.29
3652 4889 4.016444 ACCGTAGCATCAAATGACCAAAT 58.984 39.130 0.00 0.00 0.00 2.32
3653 4890 3.417101 ACCGTAGCATCAAATGACCAAA 58.583 40.909 0.00 0.00 0.00 3.28
3654 4891 3.066291 ACCGTAGCATCAAATGACCAA 57.934 42.857 0.00 0.00 0.00 3.67
3655 4892 2.779755 ACCGTAGCATCAAATGACCA 57.220 45.000 0.00 0.00 0.00 4.02
3656 4893 4.632153 AGATACCGTAGCATCAAATGACC 58.368 43.478 0.00 0.00 0.00 4.02
3657 4894 5.559035 GCAAGATACCGTAGCATCAAATGAC 60.559 44.000 0.00 0.00 0.00 3.06
3658 4895 4.511454 GCAAGATACCGTAGCATCAAATGA 59.489 41.667 0.00 0.00 0.00 2.57
3659 4896 4.512944 AGCAAGATACCGTAGCATCAAATG 59.487 41.667 0.00 0.00 0.00 2.32
3661 4898 4.137116 AGCAAGATACCGTAGCATCAAA 57.863 40.909 0.00 0.00 0.00 2.69
3663 4900 3.819564 AAGCAAGATACCGTAGCATCA 57.180 42.857 0.00 0.00 0.00 3.07
3664 4901 5.047847 TGTTAAGCAAGATACCGTAGCATC 58.952 41.667 0.00 0.00 0.00 3.91
3665 4902 5.018539 TGTTAAGCAAGATACCGTAGCAT 57.981 39.130 0.00 0.00 0.00 3.79
3666 4903 4.158949 TCTGTTAAGCAAGATACCGTAGCA 59.841 41.667 0.00 0.00 0.00 3.49
3667 4904 4.503370 GTCTGTTAAGCAAGATACCGTAGC 59.497 45.833 0.00 0.00 0.00 3.58
3671 4908 3.865745 CCTGTCTGTTAAGCAAGATACCG 59.134 47.826 0.00 0.00 0.00 4.02
3672 4909 5.086104 TCCTGTCTGTTAAGCAAGATACC 57.914 43.478 0.00 0.00 0.00 2.73
3673 4910 6.311690 GTCTTCCTGTCTGTTAAGCAAGATAC 59.688 42.308 0.00 0.00 0.00 2.24
3675 4912 5.012561 AGTCTTCCTGTCTGTTAAGCAAGAT 59.987 40.000 0.00 0.00 0.00 2.40
3676 4913 4.345257 AGTCTTCCTGTCTGTTAAGCAAGA 59.655 41.667 0.00 0.00 0.00 3.02
3677 4914 4.636249 AGTCTTCCTGTCTGTTAAGCAAG 58.364 43.478 0.00 0.00 0.00 4.01
3679 4916 4.689612 AAGTCTTCCTGTCTGTTAAGCA 57.310 40.909 0.00 0.00 0.00 3.91
3680 4917 7.173390 ACATAAAAGTCTTCCTGTCTGTTAAGC 59.827 37.037 0.00 0.00 0.00 3.09
3718 5046 2.107950 TGTGGTTCCTAGGCGATTTG 57.892 50.000 2.96 0.00 0.00 2.32
3800 5129 5.989168 CCCAAATACAGCAATATCGTACTCA 59.011 40.000 0.00 0.00 0.00 3.41
3860 5189 2.360553 ATCAGAGTTGACAGCAGACG 57.639 50.000 0.00 0.00 35.83 4.18
3862 5191 5.449725 CGATCTTATCAGAGTTGACAGCAGA 60.450 44.000 0.00 0.00 35.83 4.26
3868 5197 4.084641 GCATGCGATCTTATCAGAGTTGAC 60.085 45.833 0.00 0.00 35.83 3.18
3909 5238 2.171448 AGCCAATAAGCTCCAGGTACTG 59.829 50.000 0.00 0.00 46.43 2.74
3950 5282 7.659652 AAGAAATTATAGTTAGCCATCGAGC 57.340 36.000 0.00 0.00 0.00 5.03
3977 5309 3.697542 TGCACGGACAGTATAGAAGCTAA 59.302 43.478 0.00 0.00 0.00 3.09
3978 5310 3.284617 TGCACGGACAGTATAGAAGCTA 58.715 45.455 0.00 0.00 0.00 3.32
3979 5311 2.100197 TGCACGGACAGTATAGAAGCT 58.900 47.619 0.00 0.00 0.00 3.74
3980 5312 2.579207 TGCACGGACAGTATAGAAGC 57.421 50.000 0.00 0.00 0.00 3.86
3981 5313 5.833082 ACTATTGCACGGACAGTATAGAAG 58.167 41.667 5.09 0.00 0.00 2.85
3982 5314 5.847111 ACTATTGCACGGACAGTATAGAA 57.153 39.130 5.09 0.00 0.00 2.10
3983 5315 6.544931 ACTTACTATTGCACGGACAGTATAGA 59.455 38.462 5.09 0.00 0.00 1.98
3984 5316 6.736123 ACTTACTATTGCACGGACAGTATAG 58.264 40.000 0.00 0.00 0.00 1.31
3985 5317 6.704289 ACTTACTATTGCACGGACAGTATA 57.296 37.500 0.00 0.00 0.00 1.47
3986 5318 5.593679 ACTTACTATTGCACGGACAGTAT 57.406 39.130 0.00 0.00 0.00 2.12
4002 5334 9.969001 TTTGCCTGGTATTAAATAGAACTTACT 57.031 29.630 0.00 0.00 0.00 2.24
4008 5340 8.474025 CAATGGTTTGCCTGGTATTAAATAGAA 58.526 33.333 0.00 0.00 35.27 2.10
4149 5941 6.183360 ACCATGGCATTGTGTTTAAACAAAAC 60.183 34.615 23.10 13.07 46.46 2.43
4150 5942 5.882557 ACCATGGCATTGTGTTTAAACAAAA 59.117 32.000 22.92 22.92 42.98 2.44
4151 5943 5.295292 CACCATGGCATTGTGTTTAAACAAA 59.705 36.000 22.14 14.92 42.98 2.83
4155 5947 4.679373 ACACCATGGCATTGTGTTTAAA 57.321 36.364 26.40 0.00 40.12 1.52
4255 6047 1.832883 TCTTTGGGCGTGCATAACAT 58.167 45.000 0.00 0.00 0.00 2.71
4256 6048 1.832883 ATCTTTGGGCGTGCATAACA 58.167 45.000 0.00 0.00 0.00 2.41
4303 6095 8.635765 TCTAAAATAAAACAGCACATCTCCTT 57.364 30.769 0.00 0.00 0.00 3.36
4312 6104 9.421806 CCAATGTCATTCTAAAATAAAACAGCA 57.578 29.630 0.00 0.00 0.00 4.41
4335 6127 7.976414 AATTCATTAGGTGATCAATTCCCAA 57.024 32.000 0.00 0.00 36.54 4.12
4371 6163 6.565999 CGAATCGCTTGTTATTCCTAAATCCC 60.566 42.308 0.00 0.00 0.00 3.85
4427 6219 9.423061 CTAATGGTTTCCCTTTTTACTGAATTG 57.577 33.333 0.00 0.00 31.10 2.32
4491 6283 3.777106 ACAGAATCAGTGCTTCAGGAA 57.223 42.857 9.26 0.00 0.00 3.36
4519 6311 1.358759 GTTGGTTTGTCTGCCACCG 59.641 57.895 0.00 0.00 34.02 4.94
4538 6330 7.520451 AGGGTGAAGGTAAAAACAAGATAAC 57.480 36.000 0.00 0.00 0.00 1.89
4554 6346 7.189079 ACTAATCCTTTAGAGAAGGGTGAAG 57.811 40.000 5.08 2.93 38.56 3.02
4596 6388 4.128925 TGACAGCAGGCAGTAATAAGAG 57.871 45.455 0.00 0.00 0.00 2.85
4610 6402 0.451383 GCACAACACAGTTGACAGCA 59.549 50.000 15.99 0.00 0.00 4.41
4670 6462 8.627487 GAACTGTCACAGAATAGTTCATCTAG 57.373 38.462 13.14 0.00 45.08 2.43
4744 6537 6.594788 ATGAGGTGATGTTGCTACAAAAAT 57.405 33.333 4.79 0.00 37.91 1.82
4757 6550 6.480524 TTAAGTCGAAACAATGAGGTGATG 57.519 37.500 0.00 0.00 0.00 3.07
4768 6561 7.972832 ATCCTGTTGTATTTAAGTCGAAACA 57.027 32.000 0.00 0.00 0.00 2.83
4825 6618 9.292195 GAGGCTCTAACACTACTAGATTAGATT 57.708 37.037 7.40 0.00 34.13 2.40
4950 6744 4.074970 GGTACAGCAGCTGCCAATTATAT 58.925 43.478 34.39 11.28 43.38 0.86
4957 6751 2.032528 GTGGTACAGCAGCTGCCA 59.967 61.111 34.39 21.75 41.80 4.92
4971 6765 2.483014 TCTTTAACCATGTCCGGTGG 57.517 50.000 8.01 8.01 39.95 4.61
4973 6767 2.817844 GCTTTCTTTAACCATGTCCGGT 59.182 45.455 0.00 0.00 42.71 5.28
4974 6768 3.081804 AGCTTTCTTTAACCATGTCCGG 58.918 45.455 0.00 0.00 0.00 5.14
5014 6809 5.045872 GGCAAATACAGGAATCTGCAATTC 58.954 41.667 11.08 11.08 44.59 2.17
5066 6864 4.872691 TCTCAGAAAAAGGAATCGCATCTC 59.127 41.667 0.00 0.00 0.00 2.75
5067 6865 4.836825 TCTCAGAAAAAGGAATCGCATCT 58.163 39.130 0.00 0.00 0.00 2.90
5073 6871 6.007076 AGAGGGTTTCTCAGAAAAAGGAATC 58.993 40.000 0.00 0.00 44.81 2.52
5105 6903 1.891150 AGCTGAACAAATGAAGCAGGG 59.109 47.619 0.00 0.00 38.14 4.45
5261 7061 2.289010 GGGCATGCAACTGTAAGCTTTT 60.289 45.455 21.36 0.00 37.60 2.27
5315 7115 4.626081 AGTGGCACAGCGGACACC 62.626 66.667 21.41 0.00 41.80 4.16
5318 7118 0.948678 TAAAAAGTGGCACAGCGGAC 59.051 50.000 21.41 0.00 41.80 4.79
5322 7122 3.923017 AGACATAAAAAGTGGCACAGC 57.077 42.857 21.41 0.00 41.80 4.40
5425 7226 0.392336 GCAGAGATGCTACCCTCAGG 59.608 60.000 0.00 0.00 40.04 3.86
5489 7300 4.091509 GCGCCGAATATGGTTCTGTTATAG 59.908 45.833 0.00 0.00 0.00 1.31
5490 7301 3.991773 GCGCCGAATATGGTTCTGTTATA 59.008 43.478 0.00 0.00 0.00 0.98
5508 7319 1.565156 TTTGATATGATCGCCGCGCC 61.565 55.000 8.21 2.87 0.00 6.53
5555 7367 4.377022 CCGTGTTTACAGAAAGGAATGTCG 60.377 45.833 0.00 0.00 0.00 4.35
5586 7398 0.395586 AAGGGAAAGCGCATATGGCA 60.396 50.000 11.47 0.00 45.17 4.92
5610 7422 9.646522 ATCAGCCCTTCATTTTGTTAATACTAT 57.353 29.630 0.00 0.00 0.00 2.12
5611 7423 9.474313 AATCAGCCCTTCATTTTGTTAATACTA 57.526 29.630 0.00 0.00 0.00 1.82
5612 7424 7.961326 ATCAGCCCTTCATTTTGTTAATACT 57.039 32.000 0.00 0.00 0.00 2.12
5613 7425 8.872845 CAAATCAGCCCTTCATTTTGTTAATAC 58.127 33.333 0.00 0.00 0.00 1.89
5614 7426 8.040132 CCAAATCAGCCCTTCATTTTGTTAATA 58.960 33.333 0.00 0.00 0.00 0.98
5630 7442 3.683365 AACCAATCAACCAAATCAGCC 57.317 42.857 0.00 0.00 0.00 4.85
5638 7450 4.211125 TGCTGAACTAAACCAATCAACCA 58.789 39.130 0.00 0.00 0.00 3.67
5699 7514 7.382218 CGCCAAAAGAAATAACAGAATCAAAGT 59.618 33.333 0.00 0.00 0.00 2.66
5733 7552 1.518903 GAAGGGGTGCAAGCAGACAC 61.519 60.000 0.00 0.00 34.77 3.67
5763 7582 8.773033 ATGAAGATATGAAGGGCACTTAAAAT 57.227 30.769 0.00 0.00 36.97 1.82
5768 7587 8.773033 AAAATATGAAGATATGAAGGGCACTT 57.227 30.769 0.00 0.00 40.34 3.16
5769 7588 9.866655 TTAAAATATGAAGATATGAAGGGCACT 57.133 29.630 0.00 0.00 0.00 4.40
5776 7595 9.827198 AGGGCCATTAAAATATGAAGATATGAA 57.173 29.630 6.18 0.00 0.00 2.57
5777 7596 9.827198 AAGGGCCATTAAAATATGAAGATATGA 57.173 29.630 0.00 0.00 0.00 2.15
5779 7598 9.827198 TGAAGGGCCATTAAAATATGAAGATAT 57.173 29.630 0.73 0.00 0.00 1.63
5780 7599 9.827198 ATGAAGGGCCATTAAAATATGAAGATA 57.173 29.630 0.73 0.00 0.00 1.98
5781 7600 8.731591 ATGAAGGGCCATTAAAATATGAAGAT 57.268 30.769 0.73 0.00 0.00 2.40
5782 7601 9.827198 ATATGAAGGGCCATTAAAATATGAAGA 57.173 29.630 0.73 0.00 0.00 2.87
5784 7603 9.827198 AGATATGAAGGGCCATTAAAATATGAA 57.173 29.630 0.73 0.00 0.00 2.57
5785 7604 9.827198 AAGATATGAAGGGCCATTAAAATATGA 57.173 29.630 0.73 0.00 0.00 2.15
5787 7606 9.827198 TGAAGATATGAAGGGCCATTAAAATAT 57.173 29.630 0.73 7.37 0.00 1.28
5788 7607 9.827198 ATGAAGATATGAAGGGCCATTAAAATA 57.173 29.630 0.73 2.27 0.00 1.40
5789 7608 8.731591 ATGAAGATATGAAGGGCCATTAAAAT 57.268 30.769 0.73 0.00 0.00 1.82
5790 7609 8.551682 AATGAAGATATGAAGGGCCATTAAAA 57.448 30.769 0.73 0.00 0.00 1.52
5791 7610 9.300681 CTAATGAAGATATGAAGGGCCATTAAA 57.699 33.333 0.73 0.00 0.00 1.52
5797 7616 4.457257 GCACTAATGAAGATATGAAGGGCC 59.543 45.833 0.00 0.00 0.00 5.80
5814 7633 6.207810 CCACCCAATTGTTAGTTTAGCACTAA 59.792 38.462 4.43 0.00 44.42 2.24
5847 7670 0.824109 TGGCTACCATGAGTTCCTCG 59.176 55.000 0.00 0.00 32.35 4.63
5881 7704 0.179111 TTCAGCTGACTAATCCGCCG 60.179 55.000 18.03 0.00 35.78 6.46
5909 7732 9.103861 GTCCAACCTTTTGTTTATTTCATTTCA 57.896 29.630 0.00 0.00 34.00 2.69
5910 7733 8.556194 GGTCCAACCTTTTGTTTATTTCATTTC 58.444 33.333 0.00 0.00 34.00 2.17
5911 7734 8.445275 GGTCCAACCTTTTGTTTATTTCATTT 57.555 30.769 0.00 0.00 34.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.