Multiple sequence alignment - TraesCS3A01G370200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G370200 chr3A 100.000 6760 0 0 1 6760 620999870 620993111 0.000000e+00 12484.0
1 TraesCS3A01G370200 chr3A 100.000 366 0 0 7006 7371 620992865 620992500 0.000000e+00 676.0
2 TraesCS3A01G370200 chr3D 92.955 4159 212 42 1895 6031 477452724 477448625 0.000000e+00 5982.0
3 TraesCS3A01G370200 chr3D 89.268 615 43 10 6152 6760 477448546 477447949 0.000000e+00 749.0
4 TraesCS3A01G370200 chr3D 93.556 419 20 6 1096 1509 477453405 477452989 1.050000e-172 617.0
5 TraesCS3A01G370200 chr3D 90.154 325 30 2 7048 7371 477447765 477447442 8.840000e-114 422.0
6 TraesCS3A01G370200 chr3D 84.783 414 63 0 75 488 30248927 30248514 4.110000e-112 416.0
7 TraesCS3A01G370200 chr3D 91.398 186 11 3 792 975 477454094 477453912 4.420000e-62 250.0
8 TraesCS3A01G370200 chr3D 90.968 155 8 4 819 969 477453824 477453672 3.490000e-48 204.0
9 TraesCS3A01G370200 chr3D 74.843 477 96 20 1 463 326713331 326712865 2.100000e-45 195.0
10 TraesCS3A01G370200 chr3D 90.217 92 8 1 628 718 477454221 477454130 1.300000e-22 119.0
11 TraesCS3A01G370200 chr3D 98.413 63 1 0 959 1021 477453897 477453835 2.170000e-20 111.0
12 TraesCS3A01G370200 chr3B 95.480 2699 88 20 1895 4577 636742383 636739703 0.000000e+00 4277.0
13 TraesCS3A01G370200 chr3B 91.020 1314 65 22 5338 6630 636738757 636737476 0.000000e+00 1724.0
14 TraesCS3A01G370200 chr3B 95.745 752 27 4 4576 5324 636739617 636738868 0.000000e+00 1206.0
15 TraesCS3A01G370200 chr3B 91.683 517 30 9 959 1468 636742890 636742380 0.000000e+00 704.0
16 TraesCS3A01G370200 chr3B 91.875 160 5 3 819 975 636743057 636742903 4.480000e-52 217.0
17 TraesCS3A01G370200 chr3B 95.833 96 4 0 1686 1781 201563233 201563138 9.900000e-34 156.0
18 TraesCS3A01G370200 chr3B 94.444 54 2 1 665 718 636744934 636744882 1.700000e-11 82.4
19 TraesCS3A01G370200 chr6A 96.998 633 14 1 1 628 590030153 590029521 0.000000e+00 1059.0
20 TraesCS3A01G370200 chr1D 96.840 633 15 1 1 628 114333377 114332745 0.000000e+00 1053.0
21 TraesCS3A01G370200 chr1D 77.601 567 121 6 3 566 488495653 488495090 9.160000e-89 339.0
22 TraesCS3A01G370200 chr5D 81.272 566 102 4 1 564 281515522 281514959 8.720000e-124 455.0
23 TraesCS3A01G370200 chr5D 94.118 102 6 0 1680 1781 449150505 449150606 9.900000e-34 156.0
24 TraesCS3A01G370200 chr7A 83.763 388 62 1 102 488 208549114 208548727 4.200000e-97 366.0
25 TraesCS3A01G370200 chr7A 75.726 482 103 10 1 475 674293937 674293463 5.750000e-56 230.0
26 TraesCS3A01G370200 chr7A 94.444 36 0 1 2132 2165 721519090 721519125 4.000000e-03 54.7
27 TraesCS3A01G370200 chr2D 76.182 571 119 13 1 564 40786204 40785644 1.210000e-72 285.0
28 TraesCS3A01G370200 chr2D 95.833 96 4 0 1686 1781 272804110 272804015 9.900000e-34 156.0
29 TraesCS3A01G370200 chr2D 94.118 102 6 0 1680 1781 630266769 630266870 9.900000e-34 156.0
30 TraesCS3A01G370200 chr2D 100.000 28 0 0 2132 2159 430457291 430457318 1.300000e-02 52.8
31 TraesCS3A01G370200 chr1B 78.191 376 75 6 102 475 535158804 535158434 4.450000e-57 233.0
32 TraesCS3A01G370200 chr1B 96.875 96 3 0 1686 1781 633731323 633731228 2.130000e-35 161.0
33 TraesCS3A01G370200 chr4B 95.098 102 5 0 1680 1781 151527991 151528092 2.130000e-35 161.0
34 TraesCS3A01G370200 chr6B 95.876 97 4 0 1686 1782 615599454 615599358 2.750000e-34 158.0
35 TraesCS3A01G370200 chr6B 100.000 28 0 0 2132 2159 147708677 147708704 1.300000e-02 52.8
36 TraesCS3A01G370200 chrUn 95.833 96 4 0 1686 1781 351213839 351213744 9.900000e-34 156.0
37 TraesCS3A01G370200 chrUn 95.833 96 4 0 1686 1781 416133370 416133275 9.900000e-34 156.0
38 TraesCS3A01G370200 chr5A 90.698 43 2 2 4170 4211 32051663 32051622 1.000000e-03 56.5
39 TraesCS3A01G370200 chr7D 100.000 29 0 0 2130 2158 444352033 444352005 4.000000e-03 54.7
40 TraesCS3A01G370200 chr6D 100.000 28 0 0 2130 2157 332908900 332908927 1.300000e-02 52.8
41 TraesCS3A01G370200 chr4A 100.000 28 0 0 2130 2157 694761602 694761575 1.300000e-02 52.8
42 TraesCS3A01G370200 chr2B 100.000 28 0 0 2130 2157 631449790 631449817 1.300000e-02 52.8
43 TraesCS3A01G370200 chr2A 100.000 28 0 0 2132 2159 778451645 778451672 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G370200 chr3A 620992500 620999870 7370 True 6580.00 12484 100.000000 1 7371 2 chr3A.!!$R1 7370
1 TraesCS3A01G370200 chr3D 477447442 477454221 6779 True 1056.75 5982 92.116125 628 7371 8 chr3D.!!$R3 6743
2 TraesCS3A01G370200 chr3B 636737476 636744934 7458 True 1368.40 4277 93.374500 665 6630 6 chr3B.!!$R2 5965
3 TraesCS3A01G370200 chr6A 590029521 590030153 632 True 1059.00 1059 96.998000 1 628 1 chr6A.!!$R1 627
4 TraesCS3A01G370200 chr1D 114332745 114333377 632 True 1053.00 1053 96.840000 1 628 1 chr1D.!!$R1 627
5 TraesCS3A01G370200 chr1D 488495090 488495653 563 True 339.00 339 77.601000 3 566 1 chr1D.!!$R2 563
6 TraesCS3A01G370200 chr5D 281514959 281515522 563 True 455.00 455 81.272000 1 564 1 chr5D.!!$R1 563
7 TraesCS3A01G370200 chr2D 40785644 40786204 560 True 285.00 285 76.182000 1 564 1 chr2D.!!$R1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
972 2775 0.179150 CGCTCACTAGTCACTGCCTC 60.179 60.000 0.00 0.0 0.00 4.70 F
1655 3816 0.257039 AGCCTTGTAGCATTCCCAGG 59.743 55.000 0.00 0.0 34.23 4.45 F
2080 4265 0.872388 CTTTGTTCGGCTGTACCACC 59.128 55.000 0.00 0.0 39.03 4.61 F
2362 4547 1.072331 GAGAAAGGGGTGAGCAGTTCA 59.928 52.381 0.00 0.0 0.00 3.18 F
3605 5796 1.966451 GGGCCCGCCTATCATTTCG 60.966 63.158 5.69 0.0 36.10 3.46 F
3808 6012 0.108804 GTCCTTCTCCGCGTTCATGA 60.109 55.000 4.92 0.0 0.00 3.07 F
5270 7564 0.521291 CACACCACTAACCAATGCCG 59.479 55.000 0.00 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1822 3983 0.174845 ACCTACGCGATTGCTAAGCA 59.825 50.000 15.93 0.0 39.65 3.91 R
3573 5764 0.110486 GGGCCCAAGAACAGAGACAA 59.890 55.000 19.95 0.0 0.00 3.18 R
3792 5996 1.991430 CGTCATGAACGCGGAGAAG 59.009 57.895 12.47 0.0 45.76 2.85 R
3808 6012 2.864343 GCATACGCCTTGATTAACTCGT 59.136 45.455 0.00 0.0 0.00 4.18 R
5591 7982 0.238289 CACGGTTCACAACTCCATGC 59.762 55.000 0.00 0.0 0.00 4.06 R
5776 8169 0.379669 GTCGCCATGCATTCTGAAGG 59.620 55.000 0.00 0.0 0.00 3.46 R
7175 9723 0.179134 CGGAGGGACTGTCAACGATC 60.179 60.000 10.38 0.0 41.55 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 100 1.617357 ACGGTCCCAAGTCAAGTACTC 59.383 52.381 0.00 0.00 37.50 2.59
118 119 5.582689 ACTCATTTTCCCATCGAAATTCC 57.417 39.130 0.00 0.00 40.18 3.01
268 269 5.013183 ACTTCTCCCATTACTAGTGCAAACT 59.987 40.000 5.39 0.00 0.00 2.66
587 593 0.696143 TGTGGGGTTCTTGTCCTCCA 60.696 55.000 0.00 0.00 0.00 3.86
622 628 9.547753 TCTCCCTCAAATAGATTTATTTTCTCG 57.452 33.333 0.00 0.00 37.38 4.04
633 639 8.964476 AGATTTATTTTCTCGGCATTCTTAGA 57.036 30.769 0.00 0.00 0.00 2.10
642 648 4.697514 TCGGCATTCTTAGATCTTTCCTG 58.302 43.478 0.00 0.00 0.00 3.86
643 649 4.405680 TCGGCATTCTTAGATCTTTCCTGA 59.594 41.667 0.00 0.00 0.00 3.86
651 657 5.605908 TCTTAGATCTTTCCTGATGCTCCAT 59.394 40.000 0.00 0.00 0.00 3.41
699 706 3.070748 GGGAGCAAACAAGAACTCTCTC 58.929 50.000 0.00 0.00 0.00 3.20
703 710 4.723309 AGCAAACAAGAACTCTCTCCATT 58.277 39.130 0.00 0.00 0.00 3.16
708 715 5.310409 ACAAGAACTCTCTCCATTTTGGA 57.690 39.130 0.00 0.00 45.98 3.53
720 727 5.732331 TCCATTTTGGAACCTGGAGATAT 57.268 39.130 0.00 0.00 45.00 1.63
721 728 6.091076 TCCATTTTGGAACCTGGAGATATT 57.909 37.500 0.00 0.00 45.00 1.28
722 729 6.502138 TCCATTTTGGAACCTGGAGATATTT 58.498 36.000 0.00 0.00 45.00 1.40
723 730 6.959366 TCCATTTTGGAACCTGGAGATATTTT 59.041 34.615 0.00 0.00 45.00 1.82
724 731 7.457535 TCCATTTTGGAACCTGGAGATATTTTT 59.542 33.333 0.00 0.00 45.00 1.94
772 779 8.566260 AGAATGTGATCTTCTGAACTTTGAAAG 58.434 33.333 2.89 2.89 31.84 2.62
773 780 6.064846 TGTGATCTTCTGAACTTTGAAAGC 57.935 37.500 4.57 0.00 0.00 3.51
775 782 4.816385 TGATCTTCTGAACTTTGAAAGCGT 59.184 37.500 4.57 0.00 0.00 5.07
777 784 5.560966 TCTTCTGAACTTTGAAAGCGTTT 57.439 34.783 4.57 0.00 0.00 3.60
778 785 5.949735 TCTTCTGAACTTTGAAAGCGTTTT 58.050 33.333 4.57 0.00 0.00 2.43
779 786 6.386654 TCTTCTGAACTTTGAAAGCGTTTTT 58.613 32.000 4.57 0.00 0.00 1.94
815 822 7.876896 AGACAAAAACTTTGAAAGCGTAAAA 57.123 28.000 4.57 0.00 0.00 1.52
817 824 6.823531 ACAAAAACTTTGAAAGCGTAAAACC 58.176 32.000 4.57 0.00 0.00 3.27
868 2636 1.425412 CACGACAAGTTTACGGAGGG 58.575 55.000 0.00 0.00 0.00 4.30
869 2637 1.043022 ACGACAAGTTTACGGAGGGT 58.957 50.000 0.00 0.00 0.00 4.34
902 2670 1.424403 ATCACATTTCGAACGCGTCA 58.576 45.000 14.44 0.00 38.98 4.35
941 2711 6.069905 TGGGCTTGTATATTGAACCACTAGAA 60.070 38.462 0.00 0.00 0.00 2.10
972 2775 0.179150 CGCTCACTAGTCACTGCCTC 60.179 60.000 0.00 0.00 0.00 4.70
974 2777 1.548269 GCTCACTAGTCACTGCCTCTT 59.452 52.381 0.00 0.00 0.00 2.85
987 2790 0.391263 GCCTCTTTCGTTGGATCGGT 60.391 55.000 0.00 0.00 0.00 4.69
1316 3474 1.079543 CCACTCTCTCCGCCTTGTG 60.080 63.158 0.00 0.00 0.00 3.33
1333 3491 2.496899 GTGAGTCCCACAATCACCAT 57.503 50.000 0.00 0.00 45.03 3.55
1334 3492 2.795329 GTGAGTCCCACAATCACCATT 58.205 47.619 0.00 0.00 45.03 3.16
1350 3508 0.526954 CATTGAGCATTTGAGCGGGC 60.527 55.000 0.00 0.00 40.15 6.13
1362 3520 6.143919 GCATTTGAGCGGGCTATTTTATTTAC 59.856 38.462 0.00 0.00 0.00 2.01
1364 3522 6.952773 TTGAGCGGGCTATTTTATTTACAT 57.047 33.333 0.00 0.00 0.00 2.29
1366 3524 7.667043 TGAGCGGGCTATTTTATTTACATAG 57.333 36.000 0.00 0.00 0.00 2.23
1382 3541 6.741992 TTACATAGATGTGGTCAAGCTTTG 57.258 37.500 0.00 0.00 41.89 2.77
1400 3559 4.805719 GCTTTGAGTTCCCTTCTTTGTTTG 59.194 41.667 0.00 0.00 0.00 2.93
1401 3560 5.394115 GCTTTGAGTTCCCTTCTTTGTTTGA 60.394 40.000 0.00 0.00 0.00 2.69
1402 3561 6.683861 GCTTTGAGTTCCCTTCTTTGTTTGAT 60.684 38.462 0.00 0.00 0.00 2.57
1403 3562 7.470009 GCTTTGAGTTCCCTTCTTTGTTTGATA 60.470 37.037 0.00 0.00 0.00 2.15
1487 3648 1.203112 TCCACACCTTCAGAGCTCTCT 60.203 52.381 14.96 0.00 41.37 3.10
1497 3658 5.163468 CCTTCAGAGCTCTCTTGTTATGCTA 60.163 44.000 14.96 0.00 37.98 3.49
1498 3659 5.512753 TCAGAGCTCTCTTGTTATGCTAG 57.487 43.478 14.96 0.00 37.98 3.42
1499 3660 5.196695 TCAGAGCTCTCTTGTTATGCTAGA 58.803 41.667 14.96 0.00 37.98 2.43
1500 3661 5.299028 TCAGAGCTCTCTTGTTATGCTAGAG 59.701 44.000 14.96 0.00 44.67 2.43
1501 3662 5.067674 CAGAGCTCTCTTGTTATGCTAGAGT 59.932 44.000 14.96 0.00 44.03 3.24
1502 3663 5.656416 AGAGCTCTCTTGTTATGCTAGAGTT 59.344 40.000 11.45 0.00 44.03 3.01
1503 3664 6.831353 AGAGCTCTCTTGTTATGCTAGAGTTA 59.169 38.462 11.45 0.00 44.03 2.24
1504 3665 7.505585 AGAGCTCTCTTGTTATGCTAGAGTTAT 59.494 37.037 11.45 0.00 44.03 1.89
1505 3666 8.017418 AGCTCTCTTGTTATGCTAGAGTTATT 57.983 34.615 0.00 0.00 44.03 1.40
1506 3667 8.482128 AGCTCTCTTGTTATGCTAGAGTTATTT 58.518 33.333 0.00 0.00 44.03 1.40
1507 3668 9.103861 GCTCTCTTGTTATGCTAGAGTTATTTT 57.896 33.333 0.00 0.00 44.03 1.82
1551 3712 8.428852 TGCTAGAGTTAATTTAGTGATGCCATA 58.571 33.333 0.00 0.00 0.00 2.74
1569 3730 9.881649 GATGCCATATCTAGTTTAGATGATTGA 57.118 33.333 8.49 0.00 44.81 2.57
1612 3773 7.289317 AGGAAATCATTTGATCTTGCCACATAT 59.711 33.333 0.00 0.00 32.75 1.78
1613 3774 7.384115 GGAAATCATTTGATCTTGCCACATATG 59.616 37.037 0.00 0.00 32.75 1.78
1614 3775 7.591421 AATCATTTGATCTTGCCACATATGA 57.409 32.000 10.38 0.00 36.81 2.15
1615 3776 7.776618 ATCATTTGATCTTGCCACATATGAT 57.223 32.000 10.38 0.00 37.63 2.45
1616 3777 8.873186 ATCATTTGATCTTGCCACATATGATA 57.127 30.769 10.38 0.00 39.20 2.15
1617 3778 8.331730 TCATTTGATCTTGCCACATATGATAG 57.668 34.615 10.38 0.00 31.20 2.08
1618 3779 8.158789 TCATTTGATCTTGCCACATATGATAGA 58.841 33.333 10.38 4.84 31.20 1.98
1619 3780 8.957466 CATTTGATCTTGCCACATATGATAGAT 58.043 33.333 10.38 9.11 0.00 1.98
1623 3784 9.609346 TGATCTTGCCACATATGATAGATAATG 57.391 33.333 10.38 0.00 0.00 1.90
1624 3785 9.828039 GATCTTGCCACATATGATAGATAATGA 57.172 33.333 10.38 0.00 0.00 2.57
1625 3786 9.833917 ATCTTGCCACATATGATAGATAATGAG 57.166 33.333 10.38 0.00 0.00 2.90
1626 3787 7.767659 TCTTGCCACATATGATAGATAATGAGC 59.232 37.037 10.38 1.77 0.00 4.26
1627 3788 7.191593 TGCCACATATGATAGATAATGAGCT 57.808 36.000 10.38 0.00 0.00 4.09
1628 3789 7.270779 TGCCACATATGATAGATAATGAGCTC 58.729 38.462 10.38 6.82 0.00 4.09
1629 3790 6.420306 GCCACATATGATAGATAATGAGCTCG 59.580 42.308 10.38 0.00 0.00 5.03
1630 3791 7.487484 CCACATATGATAGATAATGAGCTCGT 58.513 38.462 10.38 5.78 0.00 4.18
1631 3792 7.647318 CCACATATGATAGATAATGAGCTCGTC 59.353 40.741 9.35 4.58 0.00 4.20
1632 3793 8.404765 CACATATGATAGATAATGAGCTCGTCT 58.595 37.037 9.35 11.72 0.00 4.18
1636 3797 7.745620 TGATAGATAATGAGCTCGTCTTGTA 57.254 36.000 9.35 3.37 0.00 2.41
1639 3800 2.301577 AATGAGCTCGTCTTGTAGCC 57.698 50.000 9.35 0.00 39.64 3.93
1640 3801 1.479709 ATGAGCTCGTCTTGTAGCCT 58.520 50.000 9.64 0.00 39.64 4.58
1641 3802 1.257743 TGAGCTCGTCTTGTAGCCTT 58.742 50.000 9.64 0.00 39.64 4.35
1644 3805 2.163815 GAGCTCGTCTTGTAGCCTTGTA 59.836 50.000 0.00 0.00 39.64 2.41
1645 3806 2.164624 AGCTCGTCTTGTAGCCTTGTAG 59.835 50.000 0.00 0.00 39.64 2.74
1646 3807 2.531206 CTCGTCTTGTAGCCTTGTAGC 58.469 52.381 0.00 0.00 0.00 3.58
1647 3808 1.890489 TCGTCTTGTAGCCTTGTAGCA 59.110 47.619 0.00 0.00 34.23 3.49
1648 3809 2.496070 TCGTCTTGTAGCCTTGTAGCAT 59.504 45.455 0.00 0.00 34.23 3.79
1649 3810 3.056107 TCGTCTTGTAGCCTTGTAGCATT 60.056 43.478 0.00 0.00 34.23 3.56
1651 3812 3.623510 GTCTTGTAGCCTTGTAGCATTCC 59.376 47.826 0.00 0.00 34.23 3.01
1654 3815 2.092968 TGTAGCCTTGTAGCATTCCCAG 60.093 50.000 0.00 0.00 34.23 4.45
1655 3816 0.257039 AGCCTTGTAGCATTCCCAGG 59.743 55.000 0.00 0.00 34.23 4.45
1657 3818 1.755179 CCTTGTAGCATTCCCAGGTG 58.245 55.000 0.00 0.00 0.00 4.00
1658 3819 1.098050 CTTGTAGCATTCCCAGGTGC 58.902 55.000 0.00 0.00 41.57 5.01
1678 3839 4.717877 TGCTTATGCATGCAACTATACCT 58.282 39.130 26.68 8.03 45.31 3.08
1679 3840 4.516321 TGCTTATGCATGCAACTATACCTG 59.484 41.667 26.68 8.44 45.31 4.00
1680 3841 4.516698 GCTTATGCATGCAACTATACCTGT 59.483 41.667 26.68 6.39 39.41 4.00
1681 3842 5.009010 GCTTATGCATGCAACTATACCTGTT 59.991 40.000 26.68 5.82 39.41 3.16
1682 3843 6.618287 TTATGCATGCAACTATACCTGTTC 57.382 37.500 26.68 0.00 0.00 3.18
1683 3844 3.949132 TGCATGCAACTATACCTGTTCA 58.051 40.909 20.30 0.00 0.00 3.18
1684 3845 3.940852 TGCATGCAACTATACCTGTTCAG 59.059 43.478 20.30 0.00 0.00 3.02
1685 3846 3.941483 GCATGCAACTATACCTGTTCAGT 59.059 43.478 14.21 0.00 0.00 3.41
1686 3847 4.201851 GCATGCAACTATACCTGTTCAGTG 60.202 45.833 14.21 0.00 0.00 3.66
1687 3848 3.937814 TGCAACTATACCTGTTCAGTGG 58.062 45.455 0.00 0.00 0.00 4.00
1688 3849 2.678336 GCAACTATACCTGTTCAGTGGC 59.322 50.000 0.00 0.00 31.20 5.01
1689 3850 3.868369 GCAACTATACCTGTTCAGTGGCA 60.868 47.826 0.00 0.00 37.79 4.92
1690 3851 4.323417 CAACTATACCTGTTCAGTGGCAA 58.677 43.478 0.00 0.00 0.00 4.52
1691 3852 4.634012 ACTATACCTGTTCAGTGGCAAA 57.366 40.909 0.00 0.00 0.00 3.68
1692 3853 4.980573 ACTATACCTGTTCAGTGGCAAAA 58.019 39.130 0.00 0.00 0.00 2.44
1693 3854 5.381757 ACTATACCTGTTCAGTGGCAAAAA 58.618 37.500 0.00 0.00 0.00 1.94
1694 3855 4.853924 ATACCTGTTCAGTGGCAAAAAG 57.146 40.909 0.00 0.00 0.00 2.27
1695 3856 2.733956 ACCTGTTCAGTGGCAAAAAGA 58.266 42.857 0.00 0.00 0.00 2.52
1696 3857 3.096092 ACCTGTTCAGTGGCAAAAAGAA 58.904 40.909 0.00 0.00 0.00 2.52
1697 3858 3.119137 ACCTGTTCAGTGGCAAAAAGAAC 60.119 43.478 12.72 12.72 39.11 3.01
1698 3859 3.108144 CTGTTCAGTGGCAAAAAGAACG 58.892 45.455 13.94 8.12 40.95 3.95
1699 3860 2.159310 TGTTCAGTGGCAAAAAGAACGG 60.159 45.455 13.94 0.00 40.95 4.44
1700 3861 1.028905 TCAGTGGCAAAAAGAACGGG 58.971 50.000 0.00 0.00 0.00 5.28
1701 3862 1.028905 CAGTGGCAAAAAGAACGGGA 58.971 50.000 0.00 0.00 0.00 5.14
1702 3863 1.613437 CAGTGGCAAAAAGAACGGGAT 59.387 47.619 0.00 0.00 0.00 3.85
1703 3864 2.035832 CAGTGGCAAAAAGAACGGGATT 59.964 45.455 0.00 0.00 0.00 3.01
1704 3865 2.296190 AGTGGCAAAAAGAACGGGATTC 59.704 45.455 0.00 0.00 37.62 2.52
1705 3866 1.268352 TGGCAAAAAGAACGGGATTCG 59.732 47.619 0.00 0.00 42.69 3.34
1717 3878 3.644884 CGGGATTCGTTAGCTCACTAT 57.355 47.619 0.00 0.00 0.00 2.12
1718 3879 3.978687 CGGGATTCGTTAGCTCACTATT 58.021 45.455 0.00 0.00 0.00 1.73
1719 3880 4.369182 CGGGATTCGTTAGCTCACTATTT 58.631 43.478 0.00 0.00 0.00 1.40
1720 3881 5.526115 CGGGATTCGTTAGCTCACTATTTA 58.474 41.667 0.00 0.00 0.00 1.40
1721 3882 5.629849 CGGGATTCGTTAGCTCACTATTTAG 59.370 44.000 0.00 0.00 0.00 1.85
1722 3883 6.514063 GGGATTCGTTAGCTCACTATTTAGT 58.486 40.000 0.00 0.00 36.90 2.24
1723 3884 7.521099 CGGGATTCGTTAGCTCACTATTTAGTA 60.521 40.741 0.00 0.00 34.13 1.82
1724 3885 7.594386 GGGATTCGTTAGCTCACTATTTAGTAC 59.406 40.741 0.00 0.00 34.13 2.73
1725 3886 7.323177 GGATTCGTTAGCTCACTATTTAGTACG 59.677 40.741 0.00 0.00 34.13 3.67
1726 3887 6.908870 TCGTTAGCTCACTATTTAGTACGA 57.091 37.500 0.00 6.94 37.43 3.43
1727 3888 6.941802 TCGTTAGCTCACTATTTAGTACGAG 58.058 40.000 0.00 4.65 35.90 4.18
1728 3889 6.536582 TCGTTAGCTCACTATTTAGTACGAGT 59.463 38.462 0.00 0.00 35.90 4.18
1729 3890 7.065085 TCGTTAGCTCACTATTTAGTACGAGTT 59.935 37.037 0.00 4.35 35.90 3.01
1730 3891 7.163845 CGTTAGCTCACTATTTAGTACGAGTTG 59.836 40.741 0.00 0.00 34.51 3.16
1731 3892 5.892568 AGCTCACTATTTAGTACGAGTTGG 58.107 41.667 0.00 0.00 34.13 3.77
1732 3893 5.418209 AGCTCACTATTTAGTACGAGTTGGT 59.582 40.000 0.00 0.00 34.13 3.67
1733 3894 5.515626 GCTCACTATTTAGTACGAGTTGGTG 59.484 44.000 0.00 0.00 34.13 4.17
1734 3895 6.624423 GCTCACTATTTAGTACGAGTTGGTGA 60.624 42.308 0.00 9.81 34.13 4.02
1735 3896 7.218228 TCACTATTTAGTACGAGTTGGTGAA 57.782 36.000 0.00 0.00 34.13 3.18
1736 3897 7.660112 TCACTATTTAGTACGAGTTGGTGAAA 58.340 34.615 0.00 0.00 34.13 2.69
1737 3898 8.308931 TCACTATTTAGTACGAGTTGGTGAAAT 58.691 33.333 0.00 0.00 34.13 2.17
1738 3899 8.380644 CACTATTTAGTACGAGTTGGTGAAATG 58.619 37.037 0.00 0.00 34.13 2.32
1739 3900 8.308931 ACTATTTAGTACGAGTTGGTGAAATGA 58.691 33.333 0.00 0.00 34.13 2.57
1740 3901 7.596749 ATTTAGTACGAGTTGGTGAAATGAG 57.403 36.000 0.00 0.00 0.00 2.90
1741 3902 3.926616 AGTACGAGTTGGTGAAATGAGG 58.073 45.455 0.00 0.00 0.00 3.86
1742 3903 2.185004 ACGAGTTGGTGAAATGAGGG 57.815 50.000 0.00 0.00 0.00 4.30
1743 3904 1.697432 ACGAGTTGGTGAAATGAGGGA 59.303 47.619 0.00 0.00 0.00 4.20
1744 3905 2.105821 ACGAGTTGGTGAAATGAGGGAA 59.894 45.455 0.00 0.00 0.00 3.97
1745 3906 3.244911 ACGAGTTGGTGAAATGAGGGAAT 60.245 43.478 0.00 0.00 0.00 3.01
1746 3907 3.375299 CGAGTTGGTGAAATGAGGGAATC 59.625 47.826 0.00 0.00 0.00 2.52
1747 3908 3.696548 GAGTTGGTGAAATGAGGGAATCC 59.303 47.826 0.00 0.00 0.00 3.01
1748 3909 3.075882 AGTTGGTGAAATGAGGGAATCCA 59.924 43.478 0.09 0.00 34.83 3.41
1749 3910 4.026052 GTTGGTGAAATGAGGGAATCCAT 58.974 43.478 0.09 0.00 34.83 3.41
1750 3911 3.902218 TGGTGAAATGAGGGAATCCATC 58.098 45.455 7.05 7.05 34.83 3.51
1751 3912 3.269118 TGGTGAAATGAGGGAATCCATCA 59.731 43.478 19.40 19.40 34.83 3.07
1752 3913 4.264307 TGGTGAAATGAGGGAATCCATCAA 60.264 41.667 20.94 0.98 34.83 2.57
1753 3914 4.711355 GGTGAAATGAGGGAATCCATCAAA 59.289 41.667 20.94 4.47 34.83 2.69
1754 3915 5.187576 GGTGAAATGAGGGAATCCATCAAAA 59.812 40.000 20.94 4.12 34.83 2.44
1755 3916 6.126968 GGTGAAATGAGGGAATCCATCAAAAT 60.127 38.462 20.94 9.71 34.83 1.82
1756 3917 7.069826 GGTGAAATGAGGGAATCCATCAAAATA 59.930 37.037 20.94 5.57 34.83 1.40
1757 3918 8.477256 GTGAAATGAGGGAATCCATCAAAATAA 58.523 33.333 20.94 3.42 34.83 1.40
1758 3919 9.216148 TGAAATGAGGGAATCCATCAAAATAAT 57.784 29.630 20.94 0.00 34.83 1.28
1761 3922 8.786710 ATGAGGGAATCCATCAAAATAATTCA 57.213 30.769 20.94 0.00 34.83 2.57
1762 3923 8.606754 TGAGGGAATCCATCAAAATAATTCAA 57.393 30.769 14.82 0.00 34.83 2.69
1763 3924 8.477256 TGAGGGAATCCATCAAAATAATTCAAC 58.523 33.333 14.82 0.00 34.83 3.18
1764 3925 8.378115 AGGGAATCCATCAAAATAATTCAACA 57.622 30.769 0.09 0.00 34.83 3.33
1765 3926 8.824783 AGGGAATCCATCAAAATAATTCAACAA 58.175 29.630 0.09 0.00 34.83 2.83
1766 3927 9.101655 GGGAATCCATCAAAATAATTCAACAAG 57.898 33.333 0.09 0.00 0.00 3.16
1767 3928 8.606602 GGAATCCATCAAAATAATTCAACAAGC 58.393 33.333 0.00 0.00 0.00 4.01
1768 3929 9.374838 GAATCCATCAAAATAATTCAACAAGCT 57.625 29.630 0.00 0.00 0.00 3.74
1769 3930 8.712285 ATCCATCAAAATAATTCAACAAGCTG 57.288 30.769 0.00 0.00 0.00 4.24
1770 3931 7.669427 TCCATCAAAATAATTCAACAAGCTGT 58.331 30.769 0.00 0.00 0.00 4.40
1771 3932 8.801299 TCCATCAAAATAATTCAACAAGCTGTA 58.199 29.630 0.00 0.00 0.00 2.74
1772 3933 9.079833 CCATCAAAATAATTCAACAAGCTGTAG 57.920 33.333 0.00 0.00 0.00 2.74
1773 3934 9.844790 CATCAAAATAATTCAACAAGCTGTAGA 57.155 29.630 0.00 0.00 0.00 2.59
1815 3976 9.023962 AGAGAAAATGCAACCATCTATGTAAAA 57.976 29.630 0.00 0.00 0.00 1.52
1822 3983 5.163519 GCAACCATCTATGTAAAATGCAGGT 60.164 40.000 0.00 0.00 0.00 4.00
1848 4015 2.296190 AGCAATCGCGTAGGTCATATCA 59.704 45.455 5.77 0.00 45.49 2.15
1854 4021 7.570507 GCAATCGCGTAGGTCATATCATTAAAA 60.571 37.037 5.77 0.00 0.00 1.52
1908 4093 3.439129 AGCGTTGTTGCTTAACCTTATCC 59.561 43.478 0.00 0.00 44.46 2.59
1965 4150 8.095169 AGAGATAATATAACCATTTCGACACCC 58.905 37.037 0.00 0.00 0.00 4.61
1984 4169 6.790319 ACACCCAGAAGAGGTAATTGTAATT 58.210 36.000 0.00 0.00 35.24 1.40
2080 4265 0.872388 CTTTGTTCGGCTGTACCACC 59.128 55.000 0.00 0.00 39.03 4.61
2091 4276 4.382254 CGGCTGTACCACCTAAACTTCATA 60.382 45.833 0.00 0.00 39.03 2.15
2130 4315 7.860872 GTCCACTTACTTTTGATTGTTAGGTTG 59.139 37.037 0.00 0.00 0.00 3.77
2174 4359 4.937620 AGCGTTGATAGTGAATTGTGTGAT 59.062 37.500 0.00 0.00 0.00 3.06
2178 4363 7.374228 GCGTTGATAGTGAATTGTGTGATTATG 59.626 37.037 0.00 0.00 0.00 1.90
2182 4367 5.571784 AGTGAATTGTGTGATTATGCCTG 57.428 39.130 0.00 0.00 0.00 4.85
2362 4547 1.072331 GAGAAAGGGGTGAGCAGTTCA 59.928 52.381 0.00 0.00 0.00 3.18
2433 4618 3.454858 TCCAATTTCTAGAGTCTGGGCT 58.545 45.455 1.86 0.00 0.00 5.19
2484 4671 5.657474 ACATGAGCAGATTTTATTGCCTTG 58.343 37.500 0.00 0.00 41.17 3.61
2499 4686 6.892658 ATTGCCTTGTGTTGTTCATTAGTA 57.107 33.333 0.00 0.00 0.00 1.82
2508 4695 6.035975 TGTGTTGTTCATTAGTATCTGCATCG 59.964 38.462 0.00 0.00 0.00 3.84
2592 4779 2.645730 TTTAAATGCCCGCATGTCAC 57.354 45.000 2.31 0.00 36.68 3.67
2686 4873 6.070995 TCACTTGTTATCCCACTGGTAAGTAG 60.071 42.308 0.00 0.00 33.79 2.57
2687 4874 5.783875 ACTTGTTATCCCACTGGTAAGTAGT 59.216 40.000 0.00 0.00 33.79 2.73
2716 4903 7.110810 AGAGGTTTAAGCCCTACTTTTATGTC 58.889 38.462 4.49 0.00 39.97 3.06
2879 5066 9.273016 TCTTTTTCTTTTCTAGTCATTCATCGT 57.727 29.630 0.00 0.00 0.00 3.73
2880 5067 9.884465 CTTTTTCTTTTCTAGTCATTCATCGTT 57.116 29.630 0.00 0.00 0.00 3.85
2883 5070 9.663904 TTTCTTTTCTAGTCATTCATCGTTTTG 57.336 29.630 0.00 0.00 0.00 2.44
2884 5071 8.601845 TCTTTTCTAGTCATTCATCGTTTTGA 57.398 30.769 0.00 0.00 0.00 2.69
2885 5072 8.495949 TCTTTTCTAGTCATTCATCGTTTTGAC 58.504 33.333 0.00 0.00 38.97 3.18
2970 5157 8.434870 GAGCTTGAAAAGATGACCCTGTTCAC 62.435 46.154 0.00 0.00 46.33 3.18
3012 5201 5.751028 GTGACTCATGATTTACCTAGCTGTC 59.249 44.000 0.00 0.00 0.00 3.51
3230 5419 3.187227 CGCTCAATCAACTATATGGTGGC 59.813 47.826 0.00 0.00 33.29 5.01
3254 5443 2.284190 CTGCTAGCCTAACCTCTTTGC 58.716 52.381 13.29 0.00 0.00 3.68
3303 5492 6.884295 ACAAGTTTATCCATTGCTAAGTGCTA 59.116 34.615 0.00 0.00 43.37 3.49
3309 5498 6.630444 ATCCATTGCTAAGTGCTATTCAAG 57.370 37.500 0.00 0.00 43.37 3.02
3422 5611 9.646427 AAGTTTTAAATGTTTGACAGCTGTTTA 57.354 25.926 22.65 10.69 0.00 2.01
3423 5612 9.083080 AGTTTTAAATGTTTGACAGCTGTTTAC 57.917 29.630 22.65 18.40 0.00 2.01
3589 5780 9.838339 ATAATTATAGTTGTCTCTGTTCTTGGG 57.162 33.333 0.00 0.00 0.00 4.12
3590 5781 2.262423 AGTTGTCTCTGTTCTTGGGC 57.738 50.000 0.00 0.00 0.00 5.36
3605 5796 1.966451 GGGCCCGCCTATCATTTCG 60.966 63.158 5.69 0.00 36.10 3.46
3620 5824 7.928706 CCTATCATTTCGTATCTTCTGTCCTTT 59.071 37.037 0.00 0.00 0.00 3.11
3633 5837 4.461198 TCTGTCCTTTCCTTCAGTTTTCC 58.539 43.478 0.00 0.00 0.00 3.13
3744 5948 5.124457 GTCATAATGGCAGTGTTCTCAACAT 59.876 40.000 0.00 0.00 44.35 2.71
3808 6012 0.108804 GTCCTTCTCCGCGTTCATGA 60.109 55.000 4.92 0.00 0.00 3.07
3828 6032 4.109766 TGACGAGTTAATCAAGGCGTATG 58.890 43.478 0.00 0.00 31.58 2.39
3909 6113 4.156922 TGGTATGTTAATGGTGCCTTTTCG 59.843 41.667 0.00 0.00 0.00 3.46
3952 6156 0.618458 TGGTGTATGAGCCAGTTCCC 59.382 55.000 0.00 0.00 0.00 3.97
4004 6208 9.720769 CTTACCAGTTTTCTAATACTTTCTCCA 57.279 33.333 0.00 0.00 0.00 3.86
4095 6300 8.998989 CGATATGTATGTTGTGTAAAGCAAAAG 58.001 33.333 0.00 0.00 0.00 2.27
4168 6373 4.034285 AGGCTTTGTAAATGCTACCAGT 57.966 40.909 0.00 0.00 45.34 4.00
4222 6427 5.343307 AAGTTTGACTTGGACAAATGCTT 57.657 34.783 0.00 0.00 37.00 3.91
4332 6537 4.833390 AGCAAGTGTTATGGGAGTTACTC 58.167 43.478 3.36 3.36 0.00 2.59
4379 6584 4.811555 TGTGAATAACAGAACTGTGCAC 57.188 40.909 10.75 10.75 44.13 4.57
4381 6586 3.247648 GTGAATAACAGAACTGTGCACGT 59.752 43.478 13.13 10.36 44.13 4.49
4445 6650 4.651778 ACTGAGCATTGCCAAGTTAGTTA 58.348 39.130 4.70 0.00 0.00 2.24
4458 6663 4.602340 AGTTAGTTAGGTGTGTCAGTGG 57.398 45.455 0.00 0.00 0.00 4.00
4480 6685 1.531365 CCCAGCCCACTTGCTTTCA 60.531 57.895 0.00 0.00 40.32 2.69
4482 6687 1.616725 CCCAGCCCACTTGCTTTCATA 60.617 52.381 0.00 0.00 40.32 2.15
4528 6733 2.678336 GGTTGCCTCTCGTTCTTTATGG 59.322 50.000 0.00 0.00 0.00 2.74
4574 6779 6.553852 TCCCTGTAGTTCTAGTGTCTTTCTTT 59.446 38.462 0.00 0.00 0.00 2.52
4650 6942 6.115448 ACTACAATAGGCCTGAACCATATC 57.885 41.667 17.99 0.00 0.00 1.63
4759 7051 5.767168 ACTAGGGTATACGTGGTTGATACTC 59.233 44.000 0.00 0.00 0.00 2.59
4775 7067 8.258708 GGTTGATACTCTAGGTTTGTGTAATCT 58.741 37.037 0.00 0.00 0.00 2.40
4788 7080 5.011090 TGTGTAATCTCTCCATCGGAAAG 57.989 43.478 0.00 0.00 0.00 2.62
4807 7099 6.129115 CGGAAAGTTTGTGCATTATTTCTGTG 60.129 38.462 0.00 0.00 31.49 3.66
4824 7116 7.889589 TTTCTGTGCAGATTATGTATATCCG 57.110 36.000 2.47 0.00 37.29 4.18
4860 7154 7.902920 AGTTAATGGCAGAAAATATGATGGT 57.097 32.000 0.00 0.00 0.00 3.55
5027 7321 4.941263 ACCTATTTGAGCTTGCATCGTTTA 59.059 37.500 0.00 0.00 0.00 2.01
5066 7360 4.032445 GCGTATAGAGTTTGACGATTTGCA 59.968 41.667 0.00 0.00 37.50 4.08
5270 7564 0.521291 CACACCACTAACCAATGCCG 59.479 55.000 0.00 0.00 0.00 5.69
5325 7619 6.748132 TCTTGGTTGGCTTTCTTTCTATTTG 58.252 36.000 0.00 0.00 0.00 2.32
5326 7620 5.467035 TGGTTGGCTTTCTTTCTATTTGG 57.533 39.130 0.00 0.00 0.00 3.28
5328 7622 4.526650 GGTTGGCTTTCTTTCTATTTGGGA 59.473 41.667 0.00 0.00 0.00 4.37
5329 7623 5.011635 GGTTGGCTTTCTTTCTATTTGGGAA 59.988 40.000 0.00 0.00 0.00 3.97
5442 7833 2.155279 GAAGGCTGGTCTTTTCACTCC 58.845 52.381 0.00 0.00 0.00 3.85
5451 7842 1.978580 TCTTTTCACTCCTCCCACTCC 59.021 52.381 0.00 0.00 0.00 3.85
5529 7920 4.202419 TGGAGGTGCTAAAAGAACTGCTTA 60.202 41.667 0.00 0.00 35.24 3.09
5591 7982 4.563337 AGATGCATTTTCCATCATGTCG 57.437 40.909 0.00 0.00 41.13 4.35
5639 8030 1.450312 GGTCTCCAGGTTCGCCATG 60.450 63.158 0.00 0.00 40.60 3.66
5717 8108 5.747675 TGTGTGTGCATGTAACATTCTTTTG 59.252 36.000 6.64 0.00 0.00 2.44
5735 8128 8.684386 TTCTTTTGTACTGATGATACCAACAA 57.316 30.769 0.00 0.00 0.00 2.83
5747 8140 9.636879 TGATGATACCAACAATTAACACATTTG 57.363 29.630 0.00 0.00 0.00 2.32
5773 8166 1.957113 GCCAGTGGATTTCTTCAGGGG 60.957 57.143 15.20 0.00 0.00 4.79
5776 8169 1.283321 AGTGGATTTCTTCAGGGGCTC 59.717 52.381 0.00 0.00 0.00 4.70
5798 8191 1.452651 CAGAATGCATGGCGACCCT 60.453 57.895 0.00 0.00 0.00 4.34
5799 8192 1.153086 AGAATGCATGGCGACCCTC 60.153 57.895 0.00 0.00 0.00 4.30
5800 8193 1.153086 GAATGCATGGCGACCCTCT 60.153 57.895 0.00 0.00 0.00 3.69
5801 8194 1.153086 AATGCATGGCGACCCTCTC 60.153 57.895 0.00 0.00 0.00 3.20
5802 8195 1.630126 AATGCATGGCGACCCTCTCT 61.630 55.000 0.00 0.00 0.00 3.10
5803 8196 2.037620 ATGCATGGCGACCCTCTCTC 62.038 60.000 0.00 0.00 0.00 3.20
5804 8197 2.430610 GCATGGCGACCCTCTCTCT 61.431 63.158 0.00 0.00 0.00 3.10
5805 8198 1.739049 CATGGCGACCCTCTCTCTC 59.261 63.158 0.00 0.00 0.00 3.20
5823 8216 1.032657 TCTCTCTCTCGAAAGCCGGG 61.033 60.000 2.18 0.00 40.97 5.73
5828 8221 3.702048 CTCGAAAGCCGGGGGTCA 61.702 66.667 2.18 0.00 39.14 4.02
5873 8267 8.246180 ACCTGTTTTGCAGTTTTCATATGATAG 58.754 33.333 6.17 0.00 43.55 2.08
5874 8268 8.246180 CCTGTTTTGCAGTTTTCATATGATAGT 58.754 33.333 6.17 0.00 43.55 2.12
5900 8294 1.442769 ACCGAACATCACATGTCTGC 58.557 50.000 0.00 0.00 44.07 4.26
5974 8369 1.668151 AGTCGCTTCAAGGAACGCC 60.668 57.895 0.00 0.00 0.00 5.68
6032 8427 3.288092 TCGCTTTACTCCTATCTCAGCA 58.712 45.455 0.00 0.00 0.00 4.41
6033 8428 3.891977 TCGCTTTACTCCTATCTCAGCAT 59.108 43.478 0.00 0.00 0.00 3.79
6039 8434 6.582677 TTACTCCTATCTCAGCATTCTAGC 57.417 41.667 0.00 0.00 0.00 3.42
6081 8520 2.562296 TCTGGGCCTCCTGTTATTCTT 58.438 47.619 4.53 0.00 34.13 2.52
6109 8551 2.143122 GACTCGTGGTTGCAATTCTCA 58.857 47.619 0.59 0.00 0.00 3.27
6151 8597 2.331809 TGATCGTCTGTCAAGTCGTG 57.668 50.000 0.00 0.00 36.51 4.35
6154 8600 1.299850 CGTCTGTCAAGTCGTGGCA 60.300 57.895 0.00 0.00 40.39 4.92
6157 8603 2.735444 CGTCTGTCAAGTCGTGGCATAT 60.735 50.000 0.00 0.00 42.21 1.78
6162 8608 6.037172 GTCTGTCAAGTCGTGGCATATATTTT 59.963 38.462 0.00 0.00 42.21 1.82
6261 8707 3.228188 TGAGCATGACCTTTGTCCTTT 57.772 42.857 0.00 0.00 41.01 3.11
6262 8708 3.565307 TGAGCATGACCTTTGTCCTTTT 58.435 40.909 0.00 0.00 41.01 2.27
6263 8709 3.960102 TGAGCATGACCTTTGTCCTTTTT 59.040 39.130 0.00 0.00 41.01 1.94
6264 8710 5.136828 TGAGCATGACCTTTGTCCTTTTTA 58.863 37.500 0.00 0.00 41.01 1.52
6265 8711 5.596361 TGAGCATGACCTTTGTCCTTTTTAA 59.404 36.000 0.00 0.00 41.01 1.52
6266 8712 6.089249 AGCATGACCTTTGTCCTTTTTAAG 57.911 37.500 0.00 0.00 41.01 1.85
6267 8713 4.686091 GCATGACCTTTGTCCTTTTTAAGC 59.314 41.667 0.00 0.00 41.01 3.09
6268 8714 5.509670 GCATGACCTTTGTCCTTTTTAAGCT 60.510 40.000 0.00 0.00 41.01 3.74
6269 8715 6.515832 CATGACCTTTGTCCTTTTTAAGCTT 58.484 36.000 3.48 3.48 41.01 3.74
6270 8716 5.901552 TGACCTTTGTCCTTTTTAAGCTTG 58.098 37.500 9.86 0.00 41.01 4.01
6271 8717 5.420739 TGACCTTTGTCCTTTTTAAGCTTGT 59.579 36.000 9.86 0.00 41.01 3.16
6272 8718 6.603997 TGACCTTTGTCCTTTTTAAGCTTGTA 59.396 34.615 9.86 0.00 41.01 2.41
6273 8719 7.122948 TGACCTTTGTCCTTTTTAAGCTTGTAA 59.877 33.333 9.86 0.03 41.01 2.41
6328 8779 2.218603 GCAGTTTCAGAAAGGAACGGA 58.781 47.619 0.00 0.00 0.00 4.69
6367 8818 0.926846 GTCTGCAGATTAGCACGAGC 59.073 55.000 21.47 0.00 40.11 5.03
6444 8895 3.677976 GCATGGAAAAGATCAAGGCCAAG 60.678 47.826 5.01 0.00 0.00 3.61
6472 8923 5.666462 TCCAGTTCGATCGATTTAATCCAA 58.334 37.500 20.18 0.00 0.00 3.53
6480 8931 2.875933 TCGATTTAATCCAATCACCCGC 59.124 45.455 0.00 0.00 33.35 6.13
6533 8985 3.157087 ACACCAACCATTTGATGTCTCC 58.843 45.455 0.00 0.00 33.81 3.71
6577 9029 2.937469 TGTTCACTTGTTGCTGTTGG 57.063 45.000 0.00 0.00 0.00 3.77
6579 9031 3.023119 TGTTCACTTGTTGCTGTTGGAT 58.977 40.909 0.00 0.00 0.00 3.41
6580 9032 3.446873 TGTTCACTTGTTGCTGTTGGATT 59.553 39.130 0.00 0.00 0.00 3.01
6581 9033 3.988379 TCACTTGTTGCTGTTGGATTC 57.012 42.857 0.00 0.00 0.00 2.52
6582 9034 3.286353 TCACTTGTTGCTGTTGGATTCA 58.714 40.909 0.00 0.00 0.00 2.57
6583 9035 3.698539 TCACTTGTTGCTGTTGGATTCAA 59.301 39.130 0.00 0.00 0.00 2.69
6612 9065 3.874383 TGAGGGAGTTGTTGGATTCAA 57.126 42.857 0.00 0.00 0.00 2.69
6621 9074 6.128472 GGAGTTGTTGGATTCAATTTCATTGC 60.128 38.462 0.00 0.00 40.05 3.56
6637 9090 0.394938 TTGCTCGCACTAAACCTCCA 59.605 50.000 0.00 0.00 0.00 3.86
6638 9091 0.037326 TGCTCGCACTAAACCTCCAG 60.037 55.000 0.00 0.00 0.00 3.86
6639 9092 1.362406 GCTCGCACTAAACCTCCAGC 61.362 60.000 0.00 0.00 0.00 4.85
6642 9095 1.685820 GCACTAAACCTCCAGCCCT 59.314 57.895 0.00 0.00 0.00 5.19
6646 9099 1.290134 CTAAACCTCCAGCCCTTCCT 58.710 55.000 0.00 0.00 0.00 3.36
6673 9131 2.644060 AACTCCTAGCCCTAACACCT 57.356 50.000 0.00 0.00 0.00 4.00
6678 9136 1.209747 CCTAGCCCTAACACCTTGTCC 59.790 57.143 0.00 0.00 0.00 4.02
6680 9138 0.693049 AGCCCTAACACCTTGTCCTG 59.307 55.000 0.00 0.00 0.00 3.86
6699 9157 6.831976 GTCCTGGGACATCTCTAACAAATAT 58.168 40.000 14.20 0.00 44.02 1.28
6709 9167 9.388506 ACATCTCTAACAAATATCCTGAAACTG 57.611 33.333 0.00 0.00 0.00 3.16
6759 9217 4.686839 GCCAAAAAGAGCCAACTAGTAG 57.313 45.455 0.00 0.00 0.00 2.57
7040 9498 2.941891 TTTTAGTTTGCGTCAGCTCG 57.058 45.000 0.00 0.00 45.42 5.03
7072 9620 1.079127 CCGCACCCTTGGACACTAG 60.079 63.158 0.00 0.00 0.00 2.57
7073 9621 1.741770 CGCACCCTTGGACACTAGC 60.742 63.158 0.00 0.00 0.00 3.42
7077 9625 2.509336 CCTTGGACACTAGCGCCG 60.509 66.667 2.29 0.00 0.00 6.46
7109 9657 1.198408 CCATCGATGGCCATGAATTCG 59.802 52.381 30.53 21.33 41.75 3.34
7137 9685 3.520187 CCACCAAAAAGGCAGCATC 57.480 52.632 0.00 0.00 43.14 3.91
7141 9689 1.259609 CCAAAAAGGCAGCATCAGGA 58.740 50.000 0.00 0.00 0.00 3.86
7145 9693 1.283347 AAAGGCAGCATCAGGAGAGA 58.717 50.000 0.00 0.00 0.00 3.10
7175 9723 0.381428 GCAACAAAGTGTCGACGACG 60.381 55.000 22.06 10.47 34.95 5.12
7176 9724 1.193644 CAACAAAGTGTCGACGACGA 58.806 50.000 22.06 5.75 46.56 4.20
7212 9760 1.895231 GTCGGCCAACGGAAAAGGT 60.895 57.895 2.24 0.00 44.45 3.50
7216 9764 1.104577 GGCCAACGGAAAAGGTGACA 61.105 55.000 0.00 0.00 0.00 3.58
7219 9767 2.021457 CCAACGGAAAAGGTGACAGTT 58.979 47.619 0.00 0.00 0.00 3.16
7223 9771 2.867975 ACGGAAAAGGTGACAGTTAACG 59.132 45.455 0.00 0.00 0.00 3.18
7224 9772 2.867975 CGGAAAAGGTGACAGTTAACGT 59.132 45.455 0.00 1.35 0.00 3.99
7225 9773 3.302870 CGGAAAAGGTGACAGTTAACGTG 60.303 47.826 7.63 5.85 0.00 4.49
7266 9814 1.334869 GAAGAATGTGGCCGCCTATTG 59.665 52.381 15.15 0.00 0.00 1.90
7267 9815 1.103398 AGAATGTGGCCGCCTATTGC 61.103 55.000 15.15 2.83 0.00 3.56
7268 9816 1.076777 AATGTGGCCGCCTATTGCT 60.077 52.632 15.15 0.00 38.05 3.91
7270 9818 1.103398 ATGTGGCCGCCTATTGCTTC 61.103 55.000 15.15 0.00 38.05 3.86
7275 9823 2.757124 CCGCCTATTGCTTCCCCCT 61.757 63.158 0.00 0.00 38.05 4.79
7285 9833 2.203938 TTCCCCCTTCGACCTGCT 60.204 61.111 0.00 0.00 0.00 4.24
7310 9858 2.181021 CGACGACTGCTACCCCAC 59.819 66.667 0.00 0.00 0.00 4.61
7319 9867 0.400213 TGCTACCCCACCTCTTGTTG 59.600 55.000 0.00 0.00 0.00 3.33
7326 9874 1.455383 CCACCTCTTGTTGCCACACC 61.455 60.000 0.00 0.00 30.32 4.16
7368 9916 0.111253 GCCGAGGATGGGATGGATTT 59.889 55.000 0.00 0.00 35.02 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 1.875514 CGATTGACTGGCATGTATGGG 59.124 52.381 0.00 0.00 0.00 4.00
268 269 7.570507 CGTCGTTTGAAGATGGATCAAAAACTA 60.571 37.037 3.51 0.00 45.43 2.24
587 593 6.031964 TCTATTTGAGGGAGAGGTAGATGT 57.968 41.667 0.00 0.00 0.00 3.06
622 628 5.048852 GCATCAGGAAAGATCTAAGAATGCC 60.049 44.000 0.00 0.00 0.00 4.40
633 639 2.512896 ACCATGGAGCATCAGGAAAGAT 59.487 45.455 21.47 0.00 36.25 2.40
642 648 6.263842 TCAGAATTCATAAACCATGGAGCATC 59.736 38.462 21.47 4.02 35.16 3.91
643 649 6.131264 TCAGAATTCATAAACCATGGAGCAT 58.869 36.000 21.47 4.77 35.16 3.79
651 657 5.945784 CCTTGGACTCAGAATTCATAAACCA 59.054 40.000 8.44 8.64 0.00 3.67
699 706 6.796785 AAATATCTCCAGGTTCCAAAATGG 57.203 37.500 0.00 0.00 39.43 3.16
729 736 9.927081 ATCACATTCTCTCCAGGTTTTTATATT 57.073 29.630 0.00 0.00 0.00 1.28
730 737 9.566432 GATCACATTCTCTCCAGGTTTTTATAT 57.434 33.333 0.00 0.00 0.00 0.86
731 738 8.772250 AGATCACATTCTCTCCAGGTTTTTATA 58.228 33.333 0.00 0.00 0.00 0.98
732 739 7.637511 AGATCACATTCTCTCCAGGTTTTTAT 58.362 34.615 0.00 0.00 0.00 1.40
733 740 7.020827 AGATCACATTCTCTCCAGGTTTTTA 57.979 36.000 0.00 0.00 0.00 1.52
734 741 5.885465 AGATCACATTCTCTCCAGGTTTTT 58.115 37.500 0.00 0.00 0.00 1.94
735 742 5.511386 AGATCACATTCTCTCCAGGTTTT 57.489 39.130 0.00 0.00 0.00 2.43
736 743 5.250313 AGAAGATCACATTCTCTCCAGGTTT 59.750 40.000 0.00 0.00 31.29 3.27
748 755 7.144000 GCTTTCAAAGTTCAGAAGATCACATT 58.856 34.615 0.00 0.00 0.00 2.71
884 2652 1.424403 ATGACGCGTTCGAAATGTGA 58.576 45.000 15.53 3.75 39.41 3.58
886 2654 2.961522 AAATGACGCGTTCGAAATGT 57.038 40.000 15.53 0.00 39.41 2.71
902 2670 2.556622 CAAGCCCAACCTACACGAAAAT 59.443 45.455 0.00 0.00 0.00 1.82
941 2711 3.307906 TGAGCGGGCCGTTACACT 61.308 61.111 28.82 15.65 0.00 3.55
972 2775 1.337823 ACCTGACCGATCCAACGAAAG 60.338 52.381 0.00 0.00 35.09 2.62
974 2777 0.682852 AACCTGACCGATCCAACGAA 59.317 50.000 0.00 0.00 35.09 3.85
1130 3288 3.050275 GCTCTGGCCAACGTGACC 61.050 66.667 7.01 0.00 0.00 4.02
1316 3474 3.012518 CTCAATGGTGATTGTGGGACTC 58.987 50.000 0.00 0.00 40.09 3.36
1333 3491 0.035534 TAGCCCGCTCAAATGCTCAA 60.036 50.000 0.00 0.00 35.34 3.02
1334 3492 0.181114 ATAGCCCGCTCAAATGCTCA 59.819 50.000 0.00 0.00 35.34 4.26
1362 3520 4.940046 ACTCAAAGCTTGACCACATCTATG 59.060 41.667 0.00 0.00 35.46 2.23
1364 3522 4.623932 ACTCAAAGCTTGACCACATCTA 57.376 40.909 0.00 0.00 35.46 1.98
1366 3524 3.057946 GGAACTCAAAGCTTGACCACATC 60.058 47.826 0.00 0.00 35.46 3.06
1382 3541 7.466050 CGCTATATCAAACAAAGAAGGGAACTC 60.466 40.741 0.00 0.00 42.68 3.01
1400 3559 8.171840 GCAAATCCTTTATCACTTCGCTATATC 58.828 37.037 0.00 0.00 0.00 1.63
1401 3560 7.880195 AGCAAATCCTTTATCACTTCGCTATAT 59.120 33.333 0.00 0.00 0.00 0.86
1402 3561 7.217200 AGCAAATCCTTTATCACTTCGCTATA 58.783 34.615 0.00 0.00 0.00 1.31
1403 3562 6.058183 AGCAAATCCTTTATCACTTCGCTAT 58.942 36.000 0.00 0.00 0.00 2.97
1507 3668 9.740239 ACTCTAGCATACGTTTCGAAATAAATA 57.260 29.630 14.69 5.02 0.00 1.40
1508 3669 8.644318 ACTCTAGCATACGTTTCGAAATAAAT 57.356 30.769 14.69 5.05 0.00 1.40
1509 3670 8.470040 AACTCTAGCATACGTTTCGAAATAAA 57.530 30.769 14.69 2.75 0.00 1.40
1510 3671 9.571810 TTAACTCTAGCATACGTTTCGAAATAA 57.428 29.630 14.69 3.12 0.00 1.40
1511 3672 9.740239 ATTAACTCTAGCATACGTTTCGAAATA 57.260 29.630 14.69 3.68 0.00 1.40
1512 3673 8.644318 ATTAACTCTAGCATACGTTTCGAAAT 57.356 30.769 14.69 1.15 0.00 2.17
1513 3674 8.470040 AATTAACTCTAGCATACGTTTCGAAA 57.530 30.769 6.47 6.47 0.00 3.46
1514 3675 8.470040 AAATTAACTCTAGCATACGTTTCGAA 57.530 30.769 0.00 0.00 0.00 3.71
1515 3676 9.229784 CTAAATTAACTCTAGCATACGTTTCGA 57.770 33.333 0.00 0.00 0.00 3.71
1516 3677 9.017669 ACTAAATTAACTCTAGCATACGTTTCG 57.982 33.333 0.00 0.00 0.00 3.46
1518 3679 9.865321 TCACTAAATTAACTCTAGCATACGTTT 57.135 29.630 0.00 0.00 0.00 3.60
1520 3681 9.464714 CATCACTAAATTAACTCTAGCATACGT 57.535 33.333 0.00 0.00 0.00 3.57
1521 3682 8.428536 GCATCACTAAATTAACTCTAGCATACG 58.571 37.037 0.00 0.00 0.00 3.06
1522 3683 8.713271 GGCATCACTAAATTAACTCTAGCATAC 58.287 37.037 0.00 0.00 0.00 2.39
1523 3684 8.428852 TGGCATCACTAAATTAACTCTAGCATA 58.571 33.333 0.00 0.00 0.00 3.14
1524 3685 7.282585 TGGCATCACTAAATTAACTCTAGCAT 58.717 34.615 0.00 0.00 0.00 3.79
1525 3686 6.649155 TGGCATCACTAAATTAACTCTAGCA 58.351 36.000 0.00 0.00 0.00 3.49
1526 3687 7.736447 ATGGCATCACTAAATTAACTCTAGC 57.264 36.000 0.00 0.00 0.00 3.42
1551 3712 7.151308 CGCCTCTTCAATCATCTAAACTAGAT 58.849 38.462 0.00 0.00 46.06 1.98
1554 3715 6.222038 ACGCCTCTTCAATCATCTAAACTA 57.778 37.500 0.00 0.00 0.00 2.24
1556 3717 5.803020 AACGCCTCTTCAATCATCTAAAC 57.197 39.130 0.00 0.00 0.00 2.01
1558 3719 4.635765 CCAAACGCCTCTTCAATCATCTAA 59.364 41.667 0.00 0.00 0.00 2.10
1569 3730 1.418637 TCCTGTTACCAAACGCCTCTT 59.581 47.619 0.00 0.00 38.53 2.85
1574 3735 3.907894 TGATTTCCTGTTACCAAACGC 57.092 42.857 0.00 0.00 38.53 4.84
1575 3736 6.442952 TCAAATGATTTCCTGTTACCAAACG 58.557 36.000 0.00 0.00 38.53 3.60
1599 3760 9.833917 CTCATTATCTATCATATGTGGCAAGAT 57.166 33.333 1.90 7.65 0.00 2.40
1612 3773 6.641169 ACAAGACGAGCTCATTATCTATCA 57.359 37.500 15.40 0.00 0.00 2.15
1613 3774 6.745450 GCTACAAGACGAGCTCATTATCTATC 59.255 42.308 15.40 0.00 35.73 2.08
1614 3775 6.349777 GGCTACAAGACGAGCTCATTATCTAT 60.350 42.308 15.40 5.60 38.79 1.98
1615 3776 5.048643 GGCTACAAGACGAGCTCATTATCTA 60.049 44.000 15.40 0.00 38.79 1.98
1616 3777 4.261825 GGCTACAAGACGAGCTCATTATCT 60.262 45.833 15.40 7.70 38.79 1.98
1617 3778 3.984633 GGCTACAAGACGAGCTCATTATC 59.015 47.826 15.40 5.39 38.79 1.75
1618 3779 3.639094 AGGCTACAAGACGAGCTCATTAT 59.361 43.478 15.40 0.00 38.79 1.28
1619 3780 3.024547 AGGCTACAAGACGAGCTCATTA 58.975 45.455 15.40 0.00 38.79 1.90
1620 3781 1.827969 AGGCTACAAGACGAGCTCATT 59.172 47.619 15.40 2.08 38.79 2.57
1621 3782 1.479709 AGGCTACAAGACGAGCTCAT 58.520 50.000 15.40 0.00 38.79 2.90
1622 3783 1.067565 CAAGGCTACAAGACGAGCTCA 60.068 52.381 15.40 0.00 38.79 4.26
1623 3784 1.067495 ACAAGGCTACAAGACGAGCTC 60.067 52.381 2.73 2.73 38.79 4.09
1624 3785 0.969894 ACAAGGCTACAAGACGAGCT 59.030 50.000 0.00 0.00 38.79 4.09
1625 3786 2.531206 CTACAAGGCTACAAGACGAGC 58.469 52.381 0.00 0.00 38.00 5.03
1626 3787 2.094700 TGCTACAAGGCTACAAGACGAG 60.095 50.000 0.00 0.00 0.00 4.18
1627 3788 1.890489 TGCTACAAGGCTACAAGACGA 59.110 47.619 0.00 0.00 0.00 4.20
1628 3789 2.363788 TGCTACAAGGCTACAAGACG 57.636 50.000 0.00 0.00 0.00 4.18
1629 3790 3.623510 GGAATGCTACAAGGCTACAAGAC 59.376 47.826 0.00 0.00 0.00 3.01
1630 3791 3.370527 GGGAATGCTACAAGGCTACAAGA 60.371 47.826 0.00 0.00 0.00 3.02
1631 3792 2.945668 GGGAATGCTACAAGGCTACAAG 59.054 50.000 0.00 0.00 0.00 3.16
1632 3793 2.307392 TGGGAATGCTACAAGGCTACAA 59.693 45.455 0.00 0.00 0.00 2.41
1636 3797 0.257039 CCTGGGAATGCTACAAGGCT 59.743 55.000 0.00 0.00 0.00 4.58
1639 3800 1.098050 GCACCTGGGAATGCTACAAG 58.902 55.000 0.00 0.00 38.84 3.16
1640 3801 3.264574 GCACCTGGGAATGCTACAA 57.735 52.632 0.00 0.00 38.84 2.41
1645 3806 0.386838 GCATAAGCACCTGGGAATGC 59.613 55.000 0.00 0.00 42.39 3.56
1657 3818 4.516698 ACAGGTATAGTTGCATGCATAAGC 59.483 41.667 23.37 14.10 42.57 3.09
1658 3819 6.260714 TGAACAGGTATAGTTGCATGCATAAG 59.739 38.462 23.37 6.98 0.00 1.73
1660 3821 5.679601 TGAACAGGTATAGTTGCATGCATA 58.320 37.500 23.37 12.62 0.00 3.14
1661 3822 4.525996 TGAACAGGTATAGTTGCATGCAT 58.474 39.130 23.37 10.46 0.00 3.96
1662 3823 3.940852 CTGAACAGGTATAGTTGCATGCA 59.059 43.478 18.46 18.46 0.00 3.96
1666 3827 3.868369 GCCACTGAACAGGTATAGTTGCA 60.868 47.826 6.76 0.00 33.50 4.08
1667 3828 2.678336 GCCACTGAACAGGTATAGTTGC 59.322 50.000 6.76 0.00 0.00 4.17
1668 3829 3.937814 TGCCACTGAACAGGTATAGTTG 58.062 45.455 6.76 0.00 0.00 3.16
1669 3830 4.634012 TTGCCACTGAACAGGTATAGTT 57.366 40.909 6.76 0.00 0.00 2.24
1670 3831 4.634012 TTTGCCACTGAACAGGTATAGT 57.366 40.909 6.76 0.00 0.00 2.12
1671 3832 5.705441 TCTTTTTGCCACTGAACAGGTATAG 59.295 40.000 6.76 0.00 0.00 1.31
1672 3833 5.626142 TCTTTTTGCCACTGAACAGGTATA 58.374 37.500 6.76 0.00 0.00 1.47
1673 3834 4.469657 TCTTTTTGCCACTGAACAGGTAT 58.530 39.130 6.76 0.00 0.00 2.73
1674 3835 3.892284 TCTTTTTGCCACTGAACAGGTA 58.108 40.909 6.76 0.00 0.00 3.08
1675 3836 2.733956 TCTTTTTGCCACTGAACAGGT 58.266 42.857 6.76 0.00 0.00 4.00
1676 3837 3.447742 GTTCTTTTTGCCACTGAACAGG 58.552 45.455 6.76 0.00 37.52 4.00
1677 3838 3.108144 CGTTCTTTTTGCCACTGAACAG 58.892 45.455 0.00 0.00 37.46 3.16
1678 3839 2.159310 CCGTTCTTTTTGCCACTGAACA 60.159 45.455 0.00 0.00 37.46 3.18
1679 3840 2.459934 CCGTTCTTTTTGCCACTGAAC 58.540 47.619 0.00 0.00 35.17 3.18
1680 3841 1.407258 CCCGTTCTTTTTGCCACTGAA 59.593 47.619 0.00 0.00 0.00 3.02
1681 3842 1.028905 CCCGTTCTTTTTGCCACTGA 58.971 50.000 0.00 0.00 0.00 3.41
1682 3843 1.028905 TCCCGTTCTTTTTGCCACTG 58.971 50.000 0.00 0.00 0.00 3.66
1683 3844 1.995376 ATCCCGTTCTTTTTGCCACT 58.005 45.000 0.00 0.00 0.00 4.00
1684 3845 2.672714 GAATCCCGTTCTTTTTGCCAC 58.327 47.619 0.00 0.00 33.89 5.01
1685 3846 1.268352 CGAATCCCGTTCTTTTTGCCA 59.732 47.619 0.00 0.00 34.56 4.92
1686 3847 1.977188 CGAATCCCGTTCTTTTTGCC 58.023 50.000 0.00 0.00 34.56 4.52
1696 3857 9.028989 ACTAAATAGTGAGCTAACGAATCCCGT 62.029 40.741 0.00 0.00 43.95 5.28
1697 3858 3.644884 ATAGTGAGCTAACGAATCCCG 57.355 47.619 0.00 0.00 45.44 5.14
1698 3859 6.514063 ACTAAATAGTGAGCTAACGAATCCC 58.486 40.000 0.00 0.00 34.72 3.85
1699 3860 7.323177 CGTACTAAATAGTGAGCTAACGAATCC 59.677 40.741 3.36 0.00 34.51 3.01
1700 3861 8.066595 TCGTACTAAATAGTGAGCTAACGAATC 58.933 37.037 10.09 0.00 37.07 2.52
1701 3862 7.923888 TCGTACTAAATAGTGAGCTAACGAAT 58.076 34.615 10.09 0.00 37.07 3.34
1702 3863 7.065085 ACTCGTACTAAATAGTGAGCTAACGAA 59.935 37.037 12.40 0.00 38.51 3.85
1703 3864 6.536582 ACTCGTACTAAATAGTGAGCTAACGA 59.463 38.462 11.37 11.37 37.43 3.85
1704 3865 6.713520 ACTCGTACTAAATAGTGAGCTAACG 58.286 40.000 3.36 4.55 37.10 3.18
1705 3866 7.431668 CCAACTCGTACTAAATAGTGAGCTAAC 59.568 40.741 3.36 0.00 37.10 2.34
1706 3867 7.121759 ACCAACTCGTACTAAATAGTGAGCTAA 59.878 37.037 3.36 0.00 37.10 3.09
1707 3868 6.600822 ACCAACTCGTACTAAATAGTGAGCTA 59.399 38.462 3.36 0.00 37.10 3.32
1708 3869 5.418209 ACCAACTCGTACTAAATAGTGAGCT 59.582 40.000 3.36 0.00 37.10 4.09
1709 3870 5.515626 CACCAACTCGTACTAAATAGTGAGC 59.484 44.000 3.36 0.00 37.10 4.26
1710 3871 6.849502 TCACCAACTCGTACTAAATAGTGAG 58.150 40.000 3.36 5.17 37.10 3.51
1711 3872 6.822667 TCACCAACTCGTACTAAATAGTGA 57.177 37.500 3.36 0.00 37.10 3.41
1712 3873 7.878477 TTTCACCAACTCGTACTAAATAGTG 57.122 36.000 3.36 0.00 37.10 2.74
1713 3874 8.308931 TCATTTCACCAACTCGTACTAAATAGT 58.691 33.333 0.00 0.00 40.24 2.12
1714 3875 8.697846 TCATTTCACCAACTCGTACTAAATAG 57.302 34.615 0.00 0.00 0.00 1.73
1715 3876 7.762615 CCTCATTTCACCAACTCGTACTAAATA 59.237 37.037 0.00 0.00 0.00 1.40
1716 3877 6.594159 CCTCATTTCACCAACTCGTACTAAAT 59.406 38.462 0.00 0.00 0.00 1.40
1717 3878 5.929992 CCTCATTTCACCAACTCGTACTAAA 59.070 40.000 0.00 0.00 0.00 1.85
1718 3879 5.475719 CCTCATTTCACCAACTCGTACTAA 58.524 41.667 0.00 0.00 0.00 2.24
1719 3880 4.081862 CCCTCATTTCACCAACTCGTACTA 60.082 45.833 0.00 0.00 0.00 1.82
1720 3881 3.306780 CCCTCATTTCACCAACTCGTACT 60.307 47.826 0.00 0.00 0.00 2.73
1721 3882 3.000727 CCCTCATTTCACCAACTCGTAC 58.999 50.000 0.00 0.00 0.00 3.67
1722 3883 2.901192 TCCCTCATTTCACCAACTCGTA 59.099 45.455 0.00 0.00 0.00 3.43
1723 3884 1.697432 TCCCTCATTTCACCAACTCGT 59.303 47.619 0.00 0.00 0.00 4.18
1724 3885 2.472695 TCCCTCATTTCACCAACTCG 57.527 50.000 0.00 0.00 0.00 4.18
1725 3886 3.696548 GGATTCCCTCATTTCACCAACTC 59.303 47.826 0.00 0.00 0.00 3.01
1726 3887 3.075882 TGGATTCCCTCATTTCACCAACT 59.924 43.478 0.00 0.00 0.00 3.16
1727 3888 3.430453 TGGATTCCCTCATTTCACCAAC 58.570 45.455 0.00 0.00 0.00 3.77
1728 3889 3.824001 TGGATTCCCTCATTTCACCAA 57.176 42.857 0.00 0.00 0.00 3.67
1729 3890 3.269118 TGATGGATTCCCTCATTTCACCA 59.731 43.478 6.58 0.00 0.00 4.17
1730 3891 3.902218 TGATGGATTCCCTCATTTCACC 58.098 45.455 6.58 0.00 0.00 4.02
1731 3892 5.920193 TTTGATGGATTCCCTCATTTCAC 57.080 39.130 10.97 0.00 0.00 3.18
1732 3893 8.606754 TTATTTTGATGGATTCCCTCATTTCA 57.393 30.769 10.97 0.00 0.00 2.69
1735 3896 9.216148 TGAATTATTTTGATGGATTCCCTCATT 57.784 29.630 10.97 2.52 0.00 2.57
1736 3897 8.786710 TGAATTATTTTGATGGATTCCCTCAT 57.213 30.769 10.97 0.66 0.00 2.90
1737 3898 8.477256 GTTGAATTATTTTGATGGATTCCCTCA 58.523 33.333 6.58 6.58 0.00 3.86
1738 3899 8.477256 TGTTGAATTATTTTGATGGATTCCCTC 58.523 33.333 0.00 0.21 0.00 4.30
1739 3900 8.378115 TGTTGAATTATTTTGATGGATTCCCT 57.622 30.769 0.00 0.00 0.00 4.20
1740 3901 9.101655 CTTGTTGAATTATTTTGATGGATTCCC 57.898 33.333 0.00 0.00 0.00 3.97
1741 3902 8.606602 GCTTGTTGAATTATTTTGATGGATTCC 58.393 33.333 0.00 0.00 0.00 3.01
1742 3903 9.374838 AGCTTGTTGAATTATTTTGATGGATTC 57.625 29.630 0.00 0.00 0.00 2.52
1743 3904 9.158233 CAGCTTGTTGAATTATTTTGATGGATT 57.842 29.630 0.00 0.00 0.00 3.01
1744 3905 8.316214 ACAGCTTGTTGAATTATTTTGATGGAT 58.684 29.630 0.00 0.00 0.00 3.41
1745 3906 7.669427 ACAGCTTGTTGAATTATTTTGATGGA 58.331 30.769 0.00 0.00 0.00 3.41
1746 3907 7.894376 ACAGCTTGTTGAATTATTTTGATGG 57.106 32.000 0.00 0.00 0.00 3.51
1747 3908 9.844790 TCTACAGCTTGTTGAATTATTTTGATG 57.155 29.630 0.00 0.00 29.73 3.07
1781 3942 9.905713 AGATGGTTGCATTTTCTCTTAGTTATA 57.094 29.630 0.00 0.00 0.00 0.98
1782 3943 8.814038 AGATGGTTGCATTTTCTCTTAGTTAT 57.186 30.769 0.00 0.00 0.00 1.89
1797 3958 5.163530 CCTGCATTTTACATAGATGGTTGCA 60.164 40.000 0.00 0.00 36.30 4.08
1800 3961 5.163519 GCACCTGCATTTTACATAGATGGTT 60.164 40.000 0.00 0.00 41.59 3.67
1802 3963 4.581824 AGCACCTGCATTTTACATAGATGG 59.418 41.667 0.00 0.00 45.16 3.51
1803 3964 5.762825 AGCACCTGCATTTTACATAGATG 57.237 39.130 0.00 0.00 45.16 2.90
1804 3965 6.016777 GCTAAGCACCTGCATTTTACATAGAT 60.017 38.462 0.00 0.00 45.16 1.98
1806 3967 5.066375 TGCTAAGCACCTGCATTTTACATAG 59.934 40.000 0.00 0.00 45.16 2.23
1815 3976 1.019673 CGATTGCTAAGCACCTGCAT 58.980 50.000 0.00 0.00 45.16 3.96
1822 3983 0.174845 ACCTACGCGATTGCTAAGCA 59.825 50.000 15.93 0.00 39.65 3.91
1865 4032 7.599171 ACGCTACAAAATTAGCACCTTAATTT 58.401 30.769 3.24 0.00 44.16 1.82
1874 4041 3.978217 GCAACAACGCTACAAAATTAGCA 59.022 39.130 3.24 0.00 44.16 3.49
1886 4053 3.439129 GGATAAGGTTAAGCAACAACGCT 59.561 43.478 7.52 0.00 46.67 5.07
1889 4056 3.754850 ACCGGATAAGGTTAAGCAACAAC 59.245 43.478 9.46 0.00 43.00 3.32
1893 4060 5.425196 AAGTACCGGATAAGGTTAAGCAA 57.575 39.130 9.46 0.00 43.00 3.91
1949 4134 3.325425 TCTTCTGGGTGTCGAAATGGTTA 59.675 43.478 0.00 0.00 0.00 2.85
1956 4141 2.297698 TACCTCTTCTGGGTGTCGAA 57.702 50.000 0.00 0.00 37.65 3.71
1965 4150 8.299570 ACAAAGCAATTACAATTACCTCTTCTG 58.700 33.333 0.00 0.00 0.00 3.02
1984 4169 3.134623 TCTTGAGAGAGGTGAACAAAGCA 59.865 43.478 0.00 0.00 0.00 3.91
2091 4276 9.574516 AAAAGTAAGTGGACATAACAGAATCTT 57.425 29.630 0.00 0.00 0.00 2.40
2126 4311 8.732746 TCTTATATTTCTTTACAGAGGCAACC 57.267 34.615 0.00 0.00 37.17 3.77
2130 4315 6.702282 ACGCTCTTATATTTCTTTACAGAGGC 59.298 38.462 0.00 0.00 0.00 4.70
2162 4347 5.981088 AACAGGCATAATCACACAATTCA 57.019 34.783 0.00 0.00 0.00 2.57
2174 4359 7.669722 AGAATTTAGAAGGACAAACAGGCATAA 59.330 33.333 0.00 0.00 0.00 1.90
2178 4363 5.966742 AGAATTTAGAAGGACAAACAGGC 57.033 39.130 0.00 0.00 0.00 4.85
2182 4367 9.508567 GCATCATTAGAATTTAGAAGGACAAAC 57.491 33.333 0.00 0.00 0.00 2.93
2362 4547 4.338400 CAGGTGATGCACAAGATCATGAAT 59.662 41.667 4.68 0.00 35.86 2.57
2433 4618 2.499289 TGCAGGAAGTTTTGAAAAGGCA 59.501 40.909 0.00 0.00 0.00 4.75
2484 4671 6.036083 ACGATGCAGATACTAATGAACAACAC 59.964 38.462 0.00 0.00 0.00 3.32
2499 4686 1.418334 AGCTAGGGAACGATGCAGAT 58.582 50.000 0.00 0.00 0.00 2.90
2508 4695 8.276252 TCATAACAAACAATTAGCTAGGGAAC 57.724 34.615 0.00 0.00 0.00 3.62
2592 4779 1.260561 CCAACGGTTGAACGACTTCAG 59.739 52.381 21.88 0.00 37.70 3.02
2686 4873 6.788598 AAGTAGGGCTTAAACCTCTACTAC 57.211 41.667 18.56 11.28 40.22 2.73
2687 4874 7.803487 AAAAGTAGGGCTTAAACCTCTACTA 57.197 36.000 18.56 2.10 40.22 1.82
2716 4903 2.027929 TGATGGGGGTAACAGTTGTACG 60.028 50.000 0.00 0.00 39.74 3.67
2860 5047 8.647035 GTCAAAACGATGAATGACTAGAAAAG 57.353 34.615 0.00 0.00 39.21 2.27
2877 5064 8.479280 CCAAATGTATTCTCAAAAGTCAAAACG 58.521 33.333 0.00 0.00 0.00 3.60
2881 5068 9.349713 ACTACCAAATGTATTCTCAAAAGTCAA 57.650 29.630 0.00 0.00 0.00 3.18
2882 5069 8.783093 CACTACCAAATGTATTCTCAAAAGTCA 58.217 33.333 0.00 0.00 0.00 3.41
2883 5070 8.999431 TCACTACCAAATGTATTCTCAAAAGTC 58.001 33.333 0.00 0.00 0.00 3.01
2884 5071 8.918202 TCACTACCAAATGTATTCTCAAAAGT 57.082 30.769 0.00 0.00 0.00 2.66
2885 5072 9.612620 GTTCACTACCAAATGTATTCTCAAAAG 57.387 33.333 0.00 0.00 0.00 2.27
2970 5157 7.864686 TGAGTCACAATAAATCACTTCACTTG 58.135 34.615 0.00 0.00 0.00 3.16
3012 5201 1.019278 CCCGAACCTCAACATCACCG 61.019 60.000 0.00 0.00 0.00 4.94
3173 5362 2.158559 ACGGCAGATGCACAACAAATA 58.841 42.857 7.19 0.00 44.36 1.40
3207 5396 3.187227 CCACCATATAGTTGATTGAGCGC 59.813 47.826 0.00 0.00 0.00 5.92
3230 5419 1.384643 AGGTTAGGCTAGCAGGGGG 60.385 63.158 18.24 0.00 0.00 5.40
3254 5443 4.282195 ACTTGGAGACTGTAAGGAAGTCAG 59.718 45.833 6.37 0.00 45.38 3.51
3355 5544 1.752498 GGCCATGTGAAGATTGCATGA 59.248 47.619 0.00 0.00 41.62 3.07
3422 5611 1.838077 CCTAATCCAAGTCCCCTTCGT 59.162 52.381 0.00 0.00 0.00 3.85
3423 5612 2.116238 TCCTAATCCAAGTCCCCTTCG 58.884 52.381 0.00 0.00 0.00 3.79
3530 5719 4.120946 ACCTGGAGAGTACAGAAGTCTT 57.879 45.455 0.00 0.00 38.04 3.01
3531 5720 3.818295 ACCTGGAGAGTACAGAAGTCT 57.182 47.619 0.00 0.00 40.80 3.24
3573 5764 0.110486 GGGCCCAAGAACAGAGACAA 59.890 55.000 19.95 0.00 0.00 3.18
3589 5780 2.000447 GATACGAAATGATAGGCGGGC 59.000 52.381 0.00 0.00 0.00 6.13
3590 5781 3.594603 AGATACGAAATGATAGGCGGG 57.405 47.619 0.00 0.00 0.00 6.13
3605 5796 6.043854 ACTGAAGGAAAGGACAGAAGATAC 57.956 41.667 0.00 0.00 34.88 2.24
3620 5824 5.568825 CGAGAATGGTAGGAAAACTGAAGGA 60.569 44.000 0.00 0.00 0.00 3.36
3697 5901 9.753674 TGACCTAGGAAATGAATTCTTTTATGT 57.246 29.630 17.98 10.67 38.18 2.29
3744 5948 4.224370 AGGTAGCCTCAAGGAATCGTTTTA 59.776 41.667 0.00 0.00 37.39 1.52
3792 5996 1.991430 CGTCATGAACGCGGAGAAG 59.009 57.895 12.47 0.00 45.76 2.85
3808 6012 2.864343 GCATACGCCTTGATTAACTCGT 59.136 45.455 0.00 0.00 0.00 4.18
3887 6091 4.157105 ACGAAAAGGCACCATTAACATACC 59.843 41.667 0.00 0.00 0.00 2.73
3909 6113 5.705397 ACAGGGTAAAATAGAAGGGGTAC 57.295 43.478 0.00 0.00 0.00 3.34
3952 6156 5.346822 AGCCAAATAACTAACGTTGTACTCG 59.653 40.000 11.99 8.87 34.59 4.18
4073 6278 8.940768 AAACTTTTGCTTTACACAACATACAT 57.059 26.923 0.00 0.00 0.00 2.29
4148 6353 4.459337 AGAACTGGTAGCATTTACAAAGCC 59.541 41.667 0.00 0.00 0.00 4.35
4197 6402 6.872920 AGCATTTGTCCAAGTCAAACTTTTA 58.127 32.000 0.00 0.00 36.03 1.52
4222 6427 7.284489 ACTTCACTCCAAATTGTAAGCAGTTTA 59.716 33.333 0.00 0.00 33.63 2.01
4294 6499 7.661536 ACACTTGCTCCTCATCTTAAGTATA 57.338 36.000 1.63 0.00 0.00 1.47
4295 6500 6.552445 ACACTTGCTCCTCATCTTAAGTAT 57.448 37.500 1.63 0.00 0.00 2.12
4332 6537 5.892568 ACTCGAGCCTTATACAGTAAACAG 58.107 41.667 13.61 0.00 0.00 3.16
4376 6581 4.992381 ACTATCAAACTTCAAGACGTGC 57.008 40.909 0.00 0.00 0.00 5.34
4414 6619 1.268899 GCAATGCTCAGTTGTCTGCTT 59.731 47.619 0.00 0.00 41.10 3.91
4445 6650 1.376466 GGCATCCACTGACACACCT 59.624 57.895 0.00 0.00 30.81 4.00
4458 6663 3.455469 GCAAGTGGGCTGGGCATC 61.455 66.667 0.00 0.00 0.00 3.91
4480 6685 2.193127 TCCCCGTGGAGTTCACAATAT 58.807 47.619 1.66 0.00 46.36 1.28
4482 6687 2.458892 TCCCCGTGGAGTTCACAAT 58.541 52.632 1.66 0.00 46.36 2.71
4496 6701 4.432741 GGCAACCCTGAGCTCCCC 62.433 72.222 12.15 0.00 0.00 4.81
4528 6733 5.507482 GGGAGTAGCCTCTTTGTTTGTTTTC 60.507 44.000 0.00 0.00 37.86 2.29
4650 6942 6.308766 GTGCCTGCAAGAAATTGTATACAAAG 59.691 38.462 21.57 11.59 36.01 2.77
4686 6978 3.706086 ACCTCAGCACAAAATTGACCTTT 59.294 39.130 0.00 0.00 0.00 3.11
4759 7051 5.980116 CGATGGAGAGATTACACAAACCTAG 59.020 44.000 0.00 0.00 0.00 3.02
4775 7067 2.151202 GCACAAACTTTCCGATGGAGA 58.849 47.619 0.00 0.00 31.21 3.71
4788 7080 5.221880 TCTGCACAGAAATAATGCACAAAC 58.778 37.500 0.00 0.00 44.17 2.93
4807 7099 8.311650 AGTTCAAACGGATATACATAATCTGC 57.688 34.615 0.00 0.00 0.00 4.26
4822 7114 7.065324 TCTGCCATTAACTAATAGTTCAAACGG 59.935 37.037 9.17 2.93 39.51 4.44
4823 7115 7.970384 TCTGCCATTAACTAATAGTTCAAACG 58.030 34.615 9.17 0.00 39.51 3.60
4860 7154 5.103940 AGAGCATTCTTAATTCCCCTGCTTA 60.104 40.000 0.00 0.00 38.50 3.09
5027 7321 1.549203 ACGCTCTGATTTGGCCAAAT 58.451 45.000 37.88 37.88 43.14 2.32
5270 7564 2.890808 TGCATGATCGAACTACCCTC 57.109 50.000 0.00 0.00 0.00 4.30
5442 7833 2.569404 AGTTTTCTAGCTGGAGTGGGAG 59.431 50.000 0.00 0.00 0.00 4.30
5451 7842 4.157289 ACATTGGCATCAGTTTTCTAGCTG 59.843 41.667 0.00 0.00 0.00 4.24
5529 7920 3.791245 CTTCTAGAGCTTTGGAATCGCT 58.209 45.455 3.45 0.00 36.57 4.93
5591 7982 0.238289 CACGGTTCACAACTCCATGC 59.762 55.000 0.00 0.00 0.00 4.06
5639 8030 1.890510 ACGTTTCTGTTGGGCGTCC 60.891 57.895 0.00 0.00 0.00 4.79
5717 8108 8.941977 TGTGTTAATTGTTGGTATCATCAGTAC 58.058 33.333 0.00 0.00 0.00 2.73
5747 8140 2.191128 AGAAATCCACTGGCAGACAC 57.809 50.000 23.66 5.14 0.00 3.67
5773 8166 0.384669 GCCATGCATTCTGAAGGAGC 59.615 55.000 6.20 5.85 0.00 4.70
5776 8169 0.379669 GTCGCCATGCATTCTGAAGG 59.620 55.000 0.00 0.00 0.00 3.46
5798 8191 3.531538 GCTTTCGAGAGAGAGAGAGAGA 58.468 50.000 7.23 0.00 44.50 3.10
5799 8192 2.614057 GGCTTTCGAGAGAGAGAGAGAG 59.386 54.545 7.23 0.00 44.50 3.20
5800 8193 2.639065 GGCTTTCGAGAGAGAGAGAGA 58.361 52.381 7.23 0.00 44.50 3.10
5801 8194 1.330521 CGGCTTTCGAGAGAGAGAGAG 59.669 57.143 7.23 0.00 44.50 3.20
5802 8195 1.374560 CGGCTTTCGAGAGAGAGAGA 58.625 55.000 7.23 0.00 44.50 3.10
5803 8196 0.380378 CCGGCTTTCGAGAGAGAGAG 59.620 60.000 7.23 0.00 44.50 3.20
5804 8197 1.032657 CCCGGCTTTCGAGAGAGAGA 61.033 60.000 7.23 0.00 44.50 3.10
5805 8198 1.435515 CCCGGCTTTCGAGAGAGAG 59.564 63.158 7.23 0.00 44.54 3.20
5823 8216 6.730960 TGTACGAAGAAATTATTGTGACCC 57.269 37.500 0.00 0.00 0.00 4.46
5828 8221 7.739498 ACAGGTTGTACGAAGAAATTATTGT 57.261 32.000 0.00 0.00 0.00 2.71
5873 8267 5.888105 ACATGTGATGTTCGGTAGTACTAC 58.112 41.667 22.53 22.53 41.63 2.73
5874 8268 5.884232 AGACATGTGATGTTCGGTAGTACTA 59.116 40.000 1.15 0.00 45.03 1.82
5875 8269 4.705507 AGACATGTGATGTTCGGTAGTACT 59.294 41.667 1.15 0.00 45.03 2.73
5884 8278 3.124806 CACTCAGCAGACATGTGATGTTC 59.875 47.826 1.15 0.00 45.03 3.18
5900 8294 2.103094 TGTCTCCTTTGTCACCACTCAG 59.897 50.000 0.00 0.00 0.00 3.35
5974 8369 1.424638 AGGATGGGGATACTGTTCCG 58.575 55.000 0.00 0.00 36.58 4.30
6032 8427 8.814038 ATTTTCCAGAAACATACTGCTAGAAT 57.186 30.769 0.00 0.00 34.47 2.40
6033 8428 8.635765 AATTTTCCAGAAACATACTGCTAGAA 57.364 30.769 0.00 0.00 34.47 2.10
6039 8434 8.025445 CCAGAAGAATTTTCCAGAAACATACTG 58.975 37.037 0.00 0.00 35.43 2.74
6081 8520 1.134521 GCAACCACGAGTCATGGGATA 60.135 52.381 10.51 0.00 41.97 2.59
6109 8551 1.337071 CGACACAGGTCTACGGCATAT 59.663 52.381 0.00 0.00 42.05 1.78
6151 8597 7.288810 TGGGTCTCATTTCAAAATATATGCC 57.711 36.000 0.00 0.00 0.00 4.40
6162 8608 7.039784 CCTGAACTAAATTTGGGTCTCATTTCA 60.040 37.037 18.95 10.16 0.00 2.69
6265 8711 8.531146 ACCAATAAAGCATTGTTATTACAAGCT 58.469 29.630 12.62 12.62 46.71 3.74
6266 8712 8.594687 CACCAATAAAGCATTGTTATTACAAGC 58.405 33.333 3.44 7.07 46.71 4.01
6267 8713 9.086336 CCACCAATAAAGCATTGTTATTACAAG 57.914 33.333 3.44 0.00 46.71 3.16
6269 8715 7.038659 GCCACCAATAAAGCATTGTTATTACA 58.961 34.615 0.00 0.00 42.22 2.41
6270 8716 7.038659 TGCCACCAATAAAGCATTGTTATTAC 58.961 34.615 0.00 0.00 42.22 1.89
6271 8717 7.175347 TGCCACCAATAAAGCATTGTTATTA 57.825 32.000 0.00 0.00 42.22 0.98
6272 8718 6.047511 TGCCACCAATAAAGCATTGTTATT 57.952 33.333 0.00 0.00 42.22 1.40
6273 8719 5.674052 TGCCACCAATAAAGCATTGTTAT 57.326 34.783 0.00 0.00 42.22 1.89
6281 8727 4.718940 AGTACAATGCCACCAATAAAGC 57.281 40.909 0.00 0.00 0.00 3.51
6328 8779 3.153919 ACTGGTCATACGTTTGCCATTT 58.846 40.909 17.37 8.97 0.00 2.32
6367 8818 0.979187 AATGAAATGGGGGCAGCCAG 60.979 55.000 15.19 0.00 0.00 4.85
6434 8885 1.425066 ACTGGAACATCTTGGCCTTGA 59.575 47.619 3.32 1.92 38.20 3.02
6444 8895 6.583912 TTAAATCGATCGAACTGGAACATC 57.416 37.500 23.50 0.00 38.20 3.06
6485 8936 4.533222 GTGGTTGGATTGTAACGAAACAG 58.467 43.478 0.00 0.00 0.00 3.16
6612 9065 3.758554 AGGTTTAGTGCGAGCAATGAAAT 59.241 39.130 8.36 0.00 0.00 2.17
6621 9074 0.741221 GGCTGGAGGTTTAGTGCGAG 60.741 60.000 0.00 0.00 0.00 5.03
6653 9111 2.917205 AGGTGTTAGGGCTAGGAGTTT 58.083 47.619 0.00 0.00 0.00 2.66
6678 9136 6.933521 CAGGATATTTGTTAGAGATGTCCCAG 59.066 42.308 0.00 0.00 33.12 4.45
6680 9138 7.067496 TCAGGATATTTGTTAGAGATGTCCC 57.933 40.000 0.00 0.00 33.12 4.46
6692 9150 9.918630 CTCAATTTTCAGTTTCAGGATATTTGT 57.081 29.630 0.00 0.00 0.00 2.83
6699 9157 4.520492 GCTCCTCAATTTTCAGTTTCAGGA 59.480 41.667 0.00 0.00 0.00 3.86
6709 9167 8.992835 AATATCACTTTTGCTCCTCAATTTTC 57.007 30.769 0.00 0.00 34.12 2.29
7005 9463 5.948742 ACTAAAATTGAGAGAGAGGGAGG 57.051 43.478 0.00 0.00 0.00 4.30
7006 9464 6.093357 GCAAACTAAAATTGAGAGAGAGGGAG 59.907 42.308 0.00 0.00 0.00 4.30
7007 9465 5.940470 GCAAACTAAAATTGAGAGAGAGGGA 59.060 40.000 0.00 0.00 0.00 4.20
7011 9469 5.989168 TGACGCAAACTAAAATTGAGAGAGA 59.011 36.000 0.00 0.00 32.75 3.10
7013 9471 5.334105 GCTGACGCAAACTAAAATTGAGAGA 60.334 40.000 0.00 0.00 35.78 3.10
7021 9479 1.529438 CCGAGCTGACGCAAACTAAAA 59.471 47.619 0.00 0.00 39.10 1.52
7062 9610 4.752879 GCCGGCGCTAGTGTCCAA 62.753 66.667 12.58 0.00 0.00 3.53
7077 9625 4.570663 CGATGGGTCTCCGACGCC 62.571 72.222 8.31 2.53 43.42 5.68
7093 9641 1.283793 GCCGAATTCATGGCCATCG 59.716 57.895 17.61 17.21 45.73 3.84
7137 9685 3.882444 TGCCAATGAGATTTCTCTCCTG 58.118 45.455 8.91 3.90 46.28 3.86
7141 9689 5.537674 ACTTTGTTGCCAATGAGATTTCTCT 59.462 36.000 8.91 0.00 43.25 3.10
7145 9693 5.280654 ACACTTTGTTGCCAATGAGATTT 57.719 34.783 0.00 0.00 31.86 2.17
7175 9723 0.179134 CGGAGGGACTGTCAACGATC 60.179 60.000 10.38 0.00 41.55 3.69
7176 9724 0.898789 ACGGAGGGACTGTCAACGAT 60.899 55.000 10.38 0.00 41.55 3.73
7212 9760 2.166870 AGTGTCACCACGTTAACTGTCA 59.833 45.455 3.71 0.00 46.56 3.58
7216 9764 2.797087 CGTCAGTGTCACCACGTTAACT 60.797 50.000 14.23 0.00 46.56 2.24
7219 9767 1.023502 TCGTCAGTGTCACCACGTTA 58.976 50.000 19.33 4.38 46.56 3.18
7223 9771 2.218953 TTCTTCGTCAGTGTCACCAC 57.781 50.000 0.00 0.00 42.17 4.16
7224 9772 2.971660 TTTCTTCGTCAGTGTCACCA 57.028 45.000 0.00 0.00 0.00 4.17
7225 9773 3.869246 TCTTTTTCTTCGTCAGTGTCACC 59.131 43.478 0.00 0.00 0.00 4.02
7266 9814 2.269241 CAGGTCGAAGGGGGAAGC 59.731 66.667 0.00 0.00 0.00 3.86
7267 9815 2.269241 GCAGGTCGAAGGGGGAAG 59.731 66.667 0.00 0.00 0.00 3.46
7268 9816 2.203938 AGCAGGTCGAAGGGGGAA 60.204 61.111 0.00 0.00 0.00 3.97
7270 9818 4.785453 GCAGCAGGTCGAAGGGGG 62.785 72.222 0.00 0.00 0.00 5.40
7275 9823 4.742201 GAGCCGCAGCAGGTCGAA 62.742 66.667 0.00 0.00 43.56 3.71
7288 9836 2.102553 GTAGCAGTCGTCGGAGCC 59.897 66.667 0.00 0.00 0.00 4.70
7295 9843 1.982938 GAGGTGGGGTAGCAGTCGT 60.983 63.158 0.00 0.00 0.00 4.34
7297 9845 0.250513 CAAGAGGTGGGGTAGCAGTC 59.749 60.000 0.00 0.00 0.00 3.51
7349 9897 0.111253 AAATCCATCCCATCCTCGGC 59.889 55.000 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.