Multiple sequence alignment - TraesCS3A01G369600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G369600 chr3A 100.000 2779 0 0 1 2779 620602979 620605757 0.000000e+00 5132
1 TraesCS3A01G369600 chr3A 87.112 419 46 5 1022 1433 620584927 620585344 4.190000e-128 468
2 TraesCS3A01G369600 chr3A 91.968 249 14 3 2218 2461 715718419 715718666 7.370000e-91 344
3 TraesCS3A01G369600 chr3A 100.000 149 0 0 1 149 252709795 252709943 2.730000e-70 276
4 TraesCS3A01G369600 chr3A 99.333 150 1 0 1 150 251870833 251870982 3.530000e-69 272
5 TraesCS3A01G369600 chr3A 99.333 150 1 0 1 150 252693255 252693404 3.530000e-69 272
6 TraesCS3A01G369600 chr3A 99.333 150 1 0 1 150 252701616 252701765 3.530000e-69 272
7 TraesCS3A01G369600 chr3B 90.233 1587 84 30 657 2221 636242126 636243663 0.000000e+00 2006
8 TraesCS3A01G369600 chr3B 86.508 504 60 7 154 655 636241580 636242077 5.230000e-152 547
9 TraesCS3A01G369600 chr3B 88.305 419 41 5 1022 1433 636228130 636228547 1.920000e-136 496
10 TraesCS3A01G369600 chr3B 94.654 318 14 3 2461 2777 636243665 636243980 8.940000e-135 490
11 TraesCS3A01G369600 chr3D 95.377 995 23 7 1029 2019 477009978 477010953 0.000000e+00 1561
12 TraesCS3A01G369600 chr3D 88.544 419 40 5 1022 1433 477007787 477008204 4.130000e-138 501
13 TraesCS3A01G369600 chr3D 94.044 319 16 2 2461 2777 477011105 477011422 5.380000e-132 481
14 TraesCS3A01G369600 chr3D 96.689 151 4 1 2072 2221 477010953 477011103 1.650000e-62 250
15 TraesCS3A01G369600 chr3D 81.743 241 27 8 735 965 477009503 477009736 4.730000e-43 185
16 TraesCS3A01G369600 chr1A 89.295 383 38 3 1127 1508 474220379 474219999 6.960000e-131 477
17 TraesCS3A01G369600 chr1A 92.460 252 14 3 2218 2464 6622283 6622032 3.400000e-94 355
18 TraesCS3A01G369600 chr1D 89.153 378 40 1 1131 1508 374451422 374451046 1.170000e-128 470
19 TraesCS3A01G369600 chr1B 84.298 484 61 13 1037 1508 499219296 499218816 2.520000e-125 459
20 TraesCS3A01G369600 chr6D 94.048 252 10 2 2218 2464 446535336 446535587 7.270000e-101 377
21 TraesCS3A01G369600 chr4D 92.520 254 13 3 2213 2461 469305706 469305454 2.630000e-95 359
22 TraesCS3A01G369600 chrUn 92.460 252 14 2 2218 2464 306175684 306175935 3.400000e-94 355
23 TraesCS3A01G369600 chrUn 92.460 252 14 2 2218 2464 345479781 345480032 3.400000e-94 355
24 TraesCS3A01G369600 chrUn 99.333 150 1 0 1 150 331855755 331855904 3.530000e-69 272
25 TraesCS3A01G369600 chr4A 92.032 251 13 4 2221 2464 476068898 476068648 2.050000e-91 346
26 TraesCS3A01G369600 chr4A 99.333 150 1 0 1 150 518740254 518740105 3.530000e-69 272
27 TraesCS3A01G369600 chr7D 91.968 249 14 3 2218 2461 631017767 631017520 7.370000e-91 344
28 TraesCS3A01G369600 chr7A 91.667 252 15 4 2218 2463 686001973 686002224 7.370000e-91 344
29 TraesCS3A01G369600 chr7A 75.373 402 70 19 205 602 20583879 20584255 1.710000e-37 167
30 TraesCS3A01G369600 chr2B 100.000 149 0 0 1 149 422831003 422831151 2.730000e-70 276
31 TraesCS3A01G369600 chr4B 99.333 150 1 0 1 150 421036592 421036443 3.530000e-69 272
32 TraesCS3A01G369600 chr4B 99.333 150 1 0 1 150 532377019 532376870 3.530000e-69 272
33 TraesCS3A01G369600 chr5D 74.743 487 93 23 187 650 212046311 212046790 1.020000e-44 191
34 TraesCS3A01G369600 chr5A 75.527 237 49 7 381 613 703462295 703462526 1.050000e-19 108
35 TraesCS3A01G369600 chr2A 98.276 58 1 0 360 417 68834346 68834289 4.900000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G369600 chr3A 620602979 620605757 2778 False 5132.000000 5132 100.0000 1 2779 1 chr3A.!!$F6 2778
1 TraesCS3A01G369600 chr3B 636241580 636243980 2400 False 1014.333333 2006 90.4650 154 2777 3 chr3B.!!$F2 2623
2 TraesCS3A01G369600 chr3D 477007787 477011422 3635 False 595.600000 1561 91.2794 735 2777 5 chr3D.!!$F1 2042

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
776 1759 0.039527 GGCAAAACACATCCCGACAC 60.04 55.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2304 3494 0.108207 CACATGCATCCCTCCTCTCC 59.892 60.0 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.741321 ACATTGAATGCATTTACCAGGG 57.259 40.909 14.33 5.85 0.00 4.45
22 23 4.095946 ACATTGAATGCATTTACCAGGGT 58.904 39.130 14.33 6.43 0.00 4.34
23 24 4.531732 ACATTGAATGCATTTACCAGGGTT 59.468 37.500 14.33 0.00 0.00 4.11
24 25 4.799564 TTGAATGCATTTACCAGGGTTC 57.200 40.909 14.33 0.00 0.00 3.62
26 27 4.415596 TGAATGCATTTACCAGGGTTCTT 58.584 39.130 14.33 0.00 0.00 2.52
27 28 4.837860 TGAATGCATTTACCAGGGTTCTTT 59.162 37.500 14.33 0.00 0.00 2.52
28 29 4.806640 ATGCATTTACCAGGGTTCTTTG 57.193 40.909 0.00 0.00 0.00 2.77
30 31 2.353704 GCATTTACCAGGGTTCTTTGCC 60.354 50.000 0.00 0.00 0.00 4.52
31 32 2.003937 TTTACCAGGGTTCTTTGCCC 57.996 50.000 0.00 0.00 46.43 5.36
38 39 1.717032 GGGTTCTTTGCCCCTCTTTT 58.283 50.000 0.00 0.00 40.26 2.27
39 40 2.884320 GGGTTCTTTGCCCCTCTTTTA 58.116 47.619 0.00 0.00 40.26 1.52
40 41 3.441101 GGGTTCTTTGCCCCTCTTTTAT 58.559 45.455 0.00 0.00 40.26 1.40
41 42 3.838317 GGGTTCTTTGCCCCTCTTTTATT 59.162 43.478 0.00 0.00 40.26 1.40
42 43 4.286032 GGGTTCTTTGCCCCTCTTTTATTT 59.714 41.667 0.00 0.00 40.26 1.40
43 44 5.482526 GGGTTCTTTGCCCCTCTTTTATTTA 59.517 40.000 0.00 0.00 40.26 1.40
44 45 6.014070 GGGTTCTTTGCCCCTCTTTTATTTAA 60.014 38.462 0.00 0.00 40.26 1.52
45 46 7.097192 GGTTCTTTGCCCCTCTTTTATTTAAG 58.903 38.462 0.00 0.00 0.00 1.85
46 47 7.256190 GGTTCTTTGCCCCTCTTTTATTTAAGT 60.256 37.037 0.00 0.00 0.00 2.24
47 48 7.849322 TCTTTGCCCCTCTTTTATTTAAGTT 57.151 32.000 0.00 0.00 0.00 2.66
49 50 8.710239 TCTTTGCCCCTCTTTTATTTAAGTTTT 58.290 29.630 0.00 0.00 0.00 2.43
51 52 7.604657 TGCCCCTCTTTTATTTAAGTTTTGA 57.395 32.000 0.00 0.00 0.00 2.69
55 56 7.039011 CCCCTCTTTTATTTAAGTTTTGAGGCT 60.039 37.037 0.00 0.00 37.73 4.58
56 57 8.367911 CCCTCTTTTATTTAAGTTTTGAGGCTT 58.632 33.333 0.00 0.00 37.73 4.35
57 58 9.411801 CCTCTTTTATTTAAGTTTTGAGGCTTC 57.588 33.333 0.00 0.00 33.32 3.86
59 60 8.919145 TCTTTTATTTAAGTTTTGAGGCTTCCA 58.081 29.630 0.00 0.00 0.00 3.53
60 61 9.541143 CTTTTATTTAAGTTTTGAGGCTTCCAA 57.459 29.630 0.00 0.00 0.00 3.53
64 65 8.607441 ATTTAAGTTTTGAGGCTTCCAATTTC 57.393 30.769 0.00 0.00 0.00 2.17
66 67 3.324846 AGTTTTGAGGCTTCCAATTTCCC 59.675 43.478 0.00 0.00 0.00 3.97
67 68 2.999185 TTGAGGCTTCCAATTTCCCT 57.001 45.000 0.00 0.00 0.00 4.20
68 69 2.514458 TGAGGCTTCCAATTTCCCTC 57.486 50.000 0.00 0.00 41.87 4.30
71 72 1.713078 AGGCTTCCAATTTCCCTCAGT 59.287 47.619 0.00 0.00 0.00 3.41
72 73 2.110721 AGGCTTCCAATTTCCCTCAGTT 59.889 45.455 0.00 0.00 0.00 3.16
73 74 2.493675 GGCTTCCAATTTCCCTCAGTTC 59.506 50.000 0.00 0.00 0.00 3.01
75 76 3.573967 GCTTCCAATTTCCCTCAGTTCAA 59.426 43.478 0.00 0.00 0.00 2.69
76 77 4.039124 GCTTCCAATTTCCCTCAGTTCAAA 59.961 41.667 0.00 0.00 0.00 2.69
77 78 5.279657 GCTTCCAATTTCCCTCAGTTCAAAT 60.280 40.000 0.00 0.00 0.00 2.32
78 79 6.742363 GCTTCCAATTTCCCTCAGTTCAAATT 60.742 38.462 0.00 0.00 0.00 1.82
79 80 6.745794 TCCAATTTCCCTCAGTTCAAATTT 57.254 33.333 0.00 0.00 0.00 1.82
80 81 6.758254 TCCAATTTCCCTCAGTTCAAATTTC 58.242 36.000 0.00 0.00 0.00 2.17
81 82 6.326064 TCCAATTTCCCTCAGTTCAAATTTCA 59.674 34.615 0.00 0.00 0.00 2.69
82 83 6.647895 CCAATTTCCCTCAGTTCAAATTTCAG 59.352 38.462 0.00 0.00 0.00 3.02
83 84 7.436118 CAATTTCCCTCAGTTCAAATTTCAGA 58.564 34.615 0.00 0.00 0.00 3.27
84 85 7.601705 ATTTCCCTCAGTTCAAATTTCAGAA 57.398 32.000 0.00 0.00 0.00 3.02
85 86 7.601705 TTTCCCTCAGTTCAAATTTCAGAAT 57.398 32.000 0.00 0.00 0.00 2.40
86 87 7.601705 TTCCCTCAGTTCAAATTTCAGAATT 57.398 32.000 0.00 0.00 37.06 2.17
87 88 7.601705 TCCCTCAGTTCAAATTTCAGAATTT 57.398 32.000 0.00 0.00 44.24 1.82
89 90 9.142014 TCCCTCAGTTCAAATTTCAGAATTTAA 57.858 29.630 0.00 0.00 42.14 1.52
90 91 9.762933 CCCTCAGTTCAAATTTCAGAATTTAAA 57.237 29.630 0.00 0.00 42.14 1.52
101 102 9.491675 AATTTCAGAATTTAAACATGATGCACA 57.508 25.926 0.00 0.00 31.48 4.57
103 104 6.979465 TCAGAATTTAAACATGATGCACACA 58.021 32.000 0.00 0.00 0.00 3.72
104 105 7.604549 TCAGAATTTAAACATGATGCACACAT 58.395 30.769 0.00 0.00 39.98 3.21
105 106 7.542824 TCAGAATTTAAACATGATGCACACATG 59.457 33.333 24.68 24.68 46.96 3.21
106 107 7.542824 CAGAATTTAAACATGATGCACACATGA 59.457 33.333 29.78 15.33 45.22 3.07
107 108 8.089597 AGAATTTAAACATGATGCACACATGAA 58.910 29.630 29.78 19.07 45.22 2.57
108 109 7.821595 ATTTAAACATGATGCACACATGAAG 57.178 32.000 29.78 13.29 45.22 3.02
110 111 2.443416 ACATGATGCACACATGAAGCT 58.557 42.857 29.78 13.55 45.22 3.74
111 112 3.613030 ACATGATGCACACATGAAGCTA 58.387 40.909 29.78 0.00 45.22 3.32
113 114 2.011947 TGATGCACACATGAAGCTAGC 58.988 47.619 6.62 6.62 36.35 3.42
114 115 1.332997 GATGCACACATGAAGCTAGCC 59.667 52.381 12.13 0.00 36.35 3.93
115 116 0.325933 TGCACACATGAAGCTAGCCT 59.674 50.000 12.13 0.00 0.00 4.58
116 117 1.554617 TGCACACATGAAGCTAGCCTA 59.445 47.619 12.13 0.00 0.00 3.93
117 118 2.208431 GCACACATGAAGCTAGCCTAG 58.792 52.381 12.13 0.00 0.00 3.02
118 119 2.159043 GCACACATGAAGCTAGCCTAGA 60.159 50.000 12.13 0.00 0.00 2.43
119 120 3.715495 CACACATGAAGCTAGCCTAGAG 58.285 50.000 12.13 1.58 0.00 2.43
120 121 2.102252 ACACATGAAGCTAGCCTAGAGC 59.898 50.000 12.13 0.00 44.25 4.09
132 133 2.488952 GCCTAGAGCATTACCAGAAGC 58.511 52.381 0.00 0.00 42.97 3.86
133 134 2.103941 GCCTAGAGCATTACCAGAAGCT 59.896 50.000 0.00 0.00 42.97 3.74
134 135 3.322254 GCCTAGAGCATTACCAGAAGCTA 59.678 47.826 0.00 0.00 42.97 3.32
135 136 4.560513 GCCTAGAGCATTACCAGAAGCTAG 60.561 50.000 0.00 0.00 42.97 3.42
137 138 2.703007 AGAGCATTACCAGAAGCTAGGG 59.297 50.000 4.97 1.22 37.48 3.53
138 139 2.700897 GAGCATTACCAGAAGCTAGGGA 59.299 50.000 5.33 0.00 37.48 4.20
139 140 3.321950 AGCATTACCAGAAGCTAGGGAT 58.678 45.455 5.33 0.00 35.19 3.85
141 142 3.181450 GCATTACCAGAAGCTAGGGATGT 60.181 47.826 5.33 0.00 0.00 3.06
143 144 2.254152 ACCAGAAGCTAGGGATGTGA 57.746 50.000 5.33 0.00 0.00 3.58
144 145 1.834263 ACCAGAAGCTAGGGATGTGAC 59.166 52.381 5.33 0.00 0.00 3.67
145 146 1.833630 CCAGAAGCTAGGGATGTGACA 59.166 52.381 0.00 0.00 0.00 3.58
146 147 2.419297 CCAGAAGCTAGGGATGTGACAC 60.419 54.545 0.00 0.00 0.00 3.67
148 149 1.834263 GAAGCTAGGGATGTGACACCT 59.166 52.381 2.45 0.23 38.40 4.00
149 150 1.490574 AGCTAGGGATGTGACACCTC 58.509 55.000 2.45 2.47 35.84 3.85
150 151 1.007721 AGCTAGGGATGTGACACCTCT 59.992 52.381 10.23 0.00 35.84 3.69
152 153 1.759445 CTAGGGATGTGACACCTCTGG 59.241 57.143 10.23 0.00 35.84 3.86
164 165 2.684104 CTCTGGGAGGAGACGGGA 59.316 66.667 0.00 0.00 35.52 5.14
169 170 3.075641 GGAGGAGACGGGACCACC 61.076 72.222 0.00 0.00 0.00 4.61
185 186 4.025401 CCGTTGCTGCCGTTGGTC 62.025 66.667 0.00 0.00 0.00 4.02
186 187 4.025401 CGTTGCTGCCGTTGGTCC 62.025 66.667 0.00 0.00 0.00 4.46
199 200 2.683933 GGTCCTCCTCCTTGCCGA 60.684 66.667 0.00 0.00 0.00 5.54
243 245 2.841988 GGCCCAGAGAGCGAGGAT 60.842 66.667 0.00 0.00 0.00 3.24
245 247 3.136750 CCCAGAGAGCGAGGATGG 58.863 66.667 0.00 0.00 0.00 3.51
273 275 0.537188 GGAACCGCCTGATGAAGAGA 59.463 55.000 0.00 0.00 0.00 3.10
320 323 2.917971 GAGAACCAAGACTTCGACATCG 59.082 50.000 0.00 0.00 41.45 3.84
321 324 1.390463 GAACCAAGACTTCGACATCGC 59.610 52.381 0.00 0.00 39.60 4.58
322 325 0.603569 ACCAAGACTTCGACATCGCT 59.396 50.000 0.00 0.00 39.60 4.93
334 337 0.396435 ACATCGCTGTTGGAGTTGGA 59.604 50.000 0.00 0.00 28.70 3.53
417 420 1.426041 CGGCGCACGGCTTAAATAGT 61.426 55.000 10.83 0.00 42.94 2.12
419 422 1.003851 GCGCACGGCTTAAATAGTCA 58.996 50.000 0.30 0.00 39.11 3.41
420 423 1.597663 GCGCACGGCTTAAATAGTCAT 59.402 47.619 0.30 0.00 39.11 3.06
447 450 1.019673 CCAGTCGAATGGGCATTCAG 58.980 55.000 23.99 0.00 45.60 3.02
513 516 2.032634 GGCGTCCACATTGAAGCGA 61.033 57.895 0.00 0.00 40.12 4.93
605 608 1.077787 TTTGCATACTCTGGGCCGG 60.078 57.895 5.83 5.83 0.00 6.13
615 618 1.278985 CTCTGGGCCGGCATGAATATA 59.721 52.381 30.85 3.52 0.00 0.86
620 623 0.179225 GCCGGCATGAATATAACGCG 60.179 55.000 24.80 3.53 0.00 6.01
649 652 2.528125 CGCATGCATTCGATGGAAAAA 58.472 42.857 19.57 0.00 35.40 1.94
650 653 2.532723 CGCATGCATTCGATGGAAAAAG 59.467 45.455 19.57 0.00 35.40 2.27
653 656 0.916581 GCATTCGATGGAAAAAGCGC 59.083 50.000 0.00 0.00 35.40 5.92
694 744 1.205417 CCGCAAAGGCCTCATTTCATT 59.795 47.619 5.23 0.00 36.38 2.57
698 748 3.514645 CAAAGGCCTCATTTCATTTCGG 58.485 45.455 5.23 0.00 0.00 4.30
735 785 9.744468 AAAACATGTTTAGATTGGTCAGTAAAC 57.256 29.630 23.53 0.00 36.38 2.01
736 786 7.448748 ACATGTTTAGATTGGTCAGTAAACC 57.551 36.000 0.00 0.00 35.43 3.27
738 788 5.856156 TGTTTAGATTGGTCAGTAAACCGA 58.144 37.500 0.00 0.00 42.62 4.69
739 789 6.469410 TGTTTAGATTGGTCAGTAAACCGAT 58.531 36.000 0.00 0.00 44.65 4.18
740 790 6.370442 TGTTTAGATTGGTCAGTAAACCGATG 59.630 38.462 0.49 0.00 42.47 3.84
741 791 4.553330 AGATTGGTCAGTAAACCGATGT 57.447 40.909 0.49 0.00 42.47 3.06
743 793 6.235231 AGATTGGTCAGTAAACCGATGTAT 57.765 37.500 0.49 0.00 42.47 2.29
745 795 7.208080 AGATTGGTCAGTAAACCGATGTATAC 58.792 38.462 0.49 0.00 42.47 1.47
746 796 5.266733 TGGTCAGTAAACCGATGTATACC 57.733 43.478 0.00 0.00 42.62 2.73
747 797 4.957954 TGGTCAGTAAACCGATGTATACCT 59.042 41.667 0.00 0.00 42.62 3.08
754 1737 2.394632 ACCGATGTATACCTGCCTTGA 58.605 47.619 0.00 0.00 0.00 3.02
771 1754 3.328505 CTTGAATGGCAAAACACATCCC 58.671 45.455 0.00 0.00 35.74 3.85
776 1759 0.039527 GGCAAAACACATCCCGACAC 60.040 55.000 0.00 0.00 0.00 3.67
819 1802 0.106335 TGTTTAAGGGTCCGCGTTGA 59.894 50.000 4.92 0.00 0.00 3.18
827 1810 0.459585 GGTCCGCGTTGAAGATGCTA 60.460 55.000 4.92 0.00 38.16 3.49
828 1811 0.645868 GTCCGCGTTGAAGATGCTAC 59.354 55.000 4.92 0.00 38.16 3.58
875 1859 2.545526 CTCTCTCTCTGCGATGACTCTC 59.454 54.545 0.00 0.00 0.00 3.20
877 1861 2.945008 CTCTCTCTGCGATGACTCTCTT 59.055 50.000 0.00 0.00 0.00 2.85
878 1862 3.351740 TCTCTCTGCGATGACTCTCTTT 58.648 45.455 0.00 0.00 0.00 2.52
879 1863 4.518249 TCTCTCTGCGATGACTCTCTTTA 58.482 43.478 0.00 0.00 0.00 1.85
880 1864 4.944317 TCTCTCTGCGATGACTCTCTTTAA 59.056 41.667 0.00 0.00 0.00 1.52
881 1865 5.416013 TCTCTCTGCGATGACTCTCTTTAAA 59.584 40.000 0.00 0.00 0.00 1.52
883 1867 6.634805 TCTCTGCGATGACTCTCTTTAAATT 58.365 36.000 0.00 0.00 0.00 1.82
884 1868 7.099764 TCTCTGCGATGACTCTCTTTAAATTT 58.900 34.615 0.00 0.00 0.00 1.82
885 1869 7.604164 TCTCTGCGATGACTCTCTTTAAATTTT 59.396 33.333 0.00 0.00 0.00 1.82
886 1870 7.743104 TCTGCGATGACTCTCTTTAAATTTTC 58.257 34.615 0.00 0.00 0.00 2.29
945 1938 3.513680 ACGCAGATACACCGATACAAA 57.486 42.857 0.00 0.00 0.00 2.83
946 1939 4.054780 ACGCAGATACACCGATACAAAT 57.945 40.909 0.00 0.00 0.00 2.32
947 1940 4.049186 ACGCAGATACACCGATACAAATC 58.951 43.478 0.00 0.00 0.00 2.17
1002 1995 1.512156 CCGTTCCGTCAAAACCAGGG 61.512 60.000 0.00 0.00 0.00 4.45
1004 1997 0.179012 GTTCCGTCAAAACCAGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
1257 2428 2.317040 TCTTCTGGTTCAAGGACTCGT 58.683 47.619 0.00 0.00 0.00 4.18
1581 2753 3.053896 GGCGGTGGCACCTGTAAC 61.054 66.667 32.28 16.58 42.47 2.50
1588 2760 3.094572 GGTGGCACCTGTAACTCTACTA 58.905 50.000 29.22 0.00 34.73 1.82
1651 2832 2.425539 CACAGATATGGTGTGTGCACA 58.574 47.619 17.42 17.42 43.94 4.57
1665 2846 8.207545 TGGTGTGTGCACATGTATATTATTAGA 58.792 33.333 24.69 0.00 46.95 2.10
1769 2950 8.798402 TGTTCGATTTGTATTTGGTCCTTAAAT 58.202 29.630 0.00 0.00 0.00 1.40
1823 3004 4.638421 CGTAGCAAATTGAACAAGGGGATA 59.362 41.667 0.00 0.00 0.00 2.59
1973 3156 1.197036 GTTTGCCTACTCCAGCGTTTC 59.803 52.381 0.00 0.00 0.00 2.78
1983 3172 0.591170 CCAGCGTTTCGTTGACCATT 59.409 50.000 7.48 0.00 40.32 3.16
2042 3231 0.035739 GTAACCCTCCGTTGCCTTCA 59.964 55.000 0.00 0.00 35.79 3.02
2067 3256 4.158579 TCAGTATCAACAGACAGAAGCGAT 59.841 41.667 0.00 0.00 0.00 4.58
2101 3290 5.220605 GCGTTCCACTTTAACATGGATAGAC 60.221 44.000 7.54 3.53 44.49 2.59
2225 3415 8.428186 TTTAAGTACATCAATATGGTTCGGAC 57.572 34.615 0.00 0.00 37.43 4.79
2226 3416 4.617959 AGTACATCAATATGGTTCGGACG 58.382 43.478 0.00 0.00 37.43 4.79
2227 3417 2.833794 ACATCAATATGGTTCGGACGG 58.166 47.619 0.00 0.00 37.43 4.79
2228 3418 2.143122 CATCAATATGGTTCGGACGGG 58.857 52.381 0.00 0.00 0.00 5.28
2229 3419 0.466543 TCAATATGGTTCGGACGGGG 59.533 55.000 0.00 0.00 0.00 5.73
2230 3420 0.466543 CAATATGGTTCGGACGGGGA 59.533 55.000 0.00 0.00 0.00 4.81
2231 3421 1.134340 CAATATGGTTCGGACGGGGAA 60.134 52.381 0.00 0.00 0.00 3.97
2232 3422 0.756903 ATATGGTTCGGACGGGGAAG 59.243 55.000 0.00 0.00 0.00 3.46
2233 3423 1.963464 TATGGTTCGGACGGGGAAGC 61.963 60.000 7.37 7.37 41.11 3.86
2239 3429 4.237207 GGACGGGGAAGCGGGATC 62.237 72.222 0.00 0.00 0.00 3.36
2240 3430 4.237207 GACGGGGAAGCGGGATCC 62.237 72.222 1.92 1.92 36.16 3.36
2241 3431 4.798682 ACGGGGAAGCGGGATCCT 62.799 66.667 12.58 0.00 37.14 3.24
2242 3432 3.930012 CGGGGAAGCGGGATCCTC 61.930 72.222 12.58 4.01 37.14 3.71
2243 3433 2.446802 GGGGAAGCGGGATCCTCT 60.447 66.667 12.58 6.48 34.40 3.69
2244 3434 2.512355 GGGGAAGCGGGATCCTCTC 61.512 68.421 12.58 0.22 34.40 3.20
2245 3435 2.512355 GGGAAGCGGGATCCTCTCC 61.512 68.421 12.58 11.82 44.11 3.71
2246 3436 1.762460 GGAAGCGGGATCCTCTCCA 60.762 63.158 12.58 0.00 46.98 3.86
2247 3437 1.745264 GAAGCGGGATCCTCTCCAG 59.255 63.158 12.58 0.00 46.98 3.86
2248 3438 1.753368 GAAGCGGGATCCTCTCCAGG 61.753 65.000 12.58 0.00 46.98 4.45
2261 3451 3.820425 CCAGGAGGTGGGTGCTTA 58.180 61.111 0.00 0.00 43.63 3.09
2262 3452 1.604378 CCAGGAGGTGGGTGCTTAG 59.396 63.158 0.00 0.00 43.63 2.18
2263 3453 0.909610 CCAGGAGGTGGGTGCTTAGA 60.910 60.000 0.00 0.00 43.63 2.10
2264 3454 0.539051 CAGGAGGTGGGTGCTTAGAG 59.461 60.000 0.00 0.00 0.00 2.43
2265 3455 0.413832 AGGAGGTGGGTGCTTAGAGA 59.586 55.000 0.00 0.00 0.00 3.10
2266 3456 0.537653 GGAGGTGGGTGCTTAGAGAC 59.462 60.000 0.00 0.00 0.00 3.36
2267 3457 1.267121 GAGGTGGGTGCTTAGAGACA 58.733 55.000 0.00 0.00 0.00 3.41
2268 3458 1.623811 GAGGTGGGTGCTTAGAGACAA 59.376 52.381 0.00 0.00 0.00 3.18
2269 3459 2.038557 GAGGTGGGTGCTTAGAGACAAA 59.961 50.000 0.00 0.00 0.00 2.83
2270 3460 2.441750 AGGTGGGTGCTTAGAGACAAAA 59.558 45.455 0.00 0.00 0.00 2.44
2271 3461 3.117663 AGGTGGGTGCTTAGAGACAAAAA 60.118 43.478 0.00 0.00 0.00 1.94
2272 3462 3.253432 GGTGGGTGCTTAGAGACAAAAAG 59.747 47.826 0.00 0.00 0.00 2.27
2273 3463 3.883489 GTGGGTGCTTAGAGACAAAAAGT 59.117 43.478 0.00 0.00 0.00 2.66
2274 3464 4.338400 GTGGGTGCTTAGAGACAAAAAGTT 59.662 41.667 0.00 0.00 0.00 2.66
2275 3465 4.578928 TGGGTGCTTAGAGACAAAAAGTTC 59.421 41.667 0.00 0.00 0.00 3.01
2276 3466 4.023107 GGGTGCTTAGAGACAAAAAGTTCC 60.023 45.833 0.00 0.00 0.00 3.62
2277 3467 4.319549 GGTGCTTAGAGACAAAAAGTTCCG 60.320 45.833 0.00 0.00 0.00 4.30
2278 3468 3.813166 TGCTTAGAGACAAAAAGTTCCGG 59.187 43.478 0.00 0.00 0.00 5.14
2279 3469 3.813724 GCTTAGAGACAAAAAGTTCCGGT 59.186 43.478 0.00 0.00 0.00 5.28
2280 3470 4.319549 GCTTAGAGACAAAAAGTTCCGGTG 60.320 45.833 0.00 0.00 0.00 4.94
2281 3471 1.947456 AGAGACAAAAAGTTCCGGTGC 59.053 47.619 0.00 0.00 0.00 5.01
2282 3472 1.673920 GAGACAAAAAGTTCCGGTGCA 59.326 47.619 0.00 0.00 0.00 4.57
2283 3473 2.293399 GAGACAAAAAGTTCCGGTGCAT 59.707 45.455 0.00 0.00 0.00 3.96
2284 3474 3.482436 AGACAAAAAGTTCCGGTGCATA 58.518 40.909 0.00 0.00 0.00 3.14
2285 3475 3.886505 AGACAAAAAGTTCCGGTGCATAA 59.113 39.130 0.00 0.00 0.00 1.90
2286 3476 4.339814 AGACAAAAAGTTCCGGTGCATAAA 59.660 37.500 0.00 0.00 0.00 1.40
2287 3477 4.616953 ACAAAAAGTTCCGGTGCATAAAG 58.383 39.130 0.00 0.00 0.00 1.85
2288 3478 4.098807 ACAAAAAGTTCCGGTGCATAAAGT 59.901 37.500 0.00 0.00 0.00 2.66
2289 3479 4.929819 AAAAGTTCCGGTGCATAAAGTT 57.070 36.364 0.00 0.00 0.00 2.66
2290 3480 3.915437 AAGTTCCGGTGCATAAAGTTG 57.085 42.857 0.00 0.00 0.00 3.16
2291 3481 3.134574 AGTTCCGGTGCATAAAGTTGA 57.865 42.857 0.00 0.00 0.00 3.18
2292 3482 3.482436 AGTTCCGGTGCATAAAGTTGAA 58.518 40.909 0.00 0.00 0.00 2.69
2293 3483 3.886505 AGTTCCGGTGCATAAAGTTGAAA 59.113 39.130 0.00 0.00 0.00 2.69
2294 3484 4.339814 AGTTCCGGTGCATAAAGTTGAAAA 59.660 37.500 0.00 0.00 0.00 2.29
2295 3485 4.920640 TCCGGTGCATAAAGTTGAAAAA 57.079 36.364 0.00 0.00 0.00 1.94
2296 3486 4.865776 TCCGGTGCATAAAGTTGAAAAAG 58.134 39.130 0.00 0.00 0.00 2.27
2297 3487 4.339814 TCCGGTGCATAAAGTTGAAAAAGT 59.660 37.500 0.00 0.00 0.00 2.66
2298 3488 5.047188 CCGGTGCATAAAGTTGAAAAAGTT 58.953 37.500 0.00 0.00 0.00 2.66
2299 3489 5.051106 CCGGTGCATAAAGTTGAAAAAGTTG 60.051 40.000 0.00 0.00 0.00 3.16
2300 3490 5.746245 CGGTGCATAAAGTTGAAAAAGTTGA 59.254 36.000 0.00 0.00 0.00 3.18
2301 3491 6.254589 CGGTGCATAAAGTTGAAAAAGTTGAA 59.745 34.615 0.00 0.00 0.00 2.69
2302 3492 7.201478 CGGTGCATAAAGTTGAAAAAGTTGAAA 60.201 33.333 0.00 0.00 0.00 2.69
2303 3493 8.611757 GGTGCATAAAGTTGAAAAAGTTGAAAT 58.388 29.630 0.00 0.00 0.00 2.17
2304 3494 9.424659 GTGCATAAAGTTGAAAAAGTTGAAATG 57.575 29.630 0.00 0.00 0.00 2.32
2305 3495 8.610896 TGCATAAAGTTGAAAAAGTTGAAATGG 58.389 29.630 0.00 0.00 0.00 3.16
2306 3496 8.825745 GCATAAAGTTGAAAAAGTTGAAATGGA 58.174 29.630 0.00 0.00 0.00 3.41
2309 3499 8.707938 AAAGTTGAAAAAGTTGAAATGGAGAG 57.292 30.769 0.00 0.00 0.00 3.20
2310 3500 6.809869 AGTTGAAAAAGTTGAAATGGAGAGG 58.190 36.000 0.00 0.00 0.00 3.69
2311 3501 6.607198 AGTTGAAAAAGTTGAAATGGAGAGGA 59.393 34.615 0.00 0.00 0.00 3.71
2312 3502 6.639632 TGAAAAAGTTGAAATGGAGAGGAG 57.360 37.500 0.00 0.00 0.00 3.69
2313 3503 5.536161 TGAAAAAGTTGAAATGGAGAGGAGG 59.464 40.000 0.00 0.00 0.00 4.30
2314 3504 3.728385 AAGTTGAAATGGAGAGGAGGG 57.272 47.619 0.00 0.00 0.00 4.30
2315 3505 2.921221 AGTTGAAATGGAGAGGAGGGA 58.079 47.619 0.00 0.00 0.00 4.20
2316 3506 3.468850 AGTTGAAATGGAGAGGAGGGAT 58.531 45.455 0.00 0.00 0.00 3.85
2317 3507 3.201708 AGTTGAAATGGAGAGGAGGGATG 59.798 47.826 0.00 0.00 0.00 3.51
2318 3508 1.492176 TGAAATGGAGAGGAGGGATGC 59.508 52.381 0.00 0.00 0.00 3.91
2319 3509 1.492176 GAAATGGAGAGGAGGGATGCA 59.508 52.381 0.00 0.00 0.00 3.96
2320 3510 1.830486 AATGGAGAGGAGGGATGCAT 58.170 50.000 0.00 0.00 0.00 3.96
2321 3511 1.065647 ATGGAGAGGAGGGATGCATG 58.934 55.000 2.46 0.00 0.00 4.06
2322 3512 0.326904 TGGAGAGGAGGGATGCATGT 60.327 55.000 2.46 0.00 0.00 3.21
2323 3513 0.108207 GGAGAGGAGGGATGCATGTG 59.892 60.000 2.46 0.00 0.00 3.21
2324 3514 0.835941 GAGAGGAGGGATGCATGTGT 59.164 55.000 2.46 0.00 0.00 3.72
2325 3515 2.042464 GAGAGGAGGGATGCATGTGTA 58.958 52.381 2.46 0.00 0.00 2.90
2326 3516 2.036992 GAGAGGAGGGATGCATGTGTAG 59.963 54.545 2.46 0.00 0.00 2.74
2327 3517 1.765314 GAGGAGGGATGCATGTGTAGT 59.235 52.381 2.46 0.00 0.00 2.73
2328 3518 1.487976 AGGAGGGATGCATGTGTAGTG 59.512 52.381 2.46 0.00 0.00 2.74
2329 3519 1.486310 GGAGGGATGCATGTGTAGTGA 59.514 52.381 2.46 0.00 0.00 3.41
2330 3520 2.484417 GGAGGGATGCATGTGTAGTGAG 60.484 54.545 2.46 0.00 0.00 3.51
2331 3521 2.432146 GAGGGATGCATGTGTAGTGAGA 59.568 50.000 2.46 0.00 0.00 3.27
2332 3522 2.433604 AGGGATGCATGTGTAGTGAGAG 59.566 50.000 2.46 0.00 0.00 3.20
2333 3523 2.169352 GGGATGCATGTGTAGTGAGAGT 59.831 50.000 2.46 0.00 0.00 3.24
2334 3524 3.452474 GGATGCATGTGTAGTGAGAGTC 58.548 50.000 2.46 0.00 0.00 3.36
2335 3525 3.118992 GGATGCATGTGTAGTGAGAGTCA 60.119 47.826 2.46 0.00 0.00 3.41
2351 3541 8.770438 GTGAGAGTCACTTTCTATTCTTTGAT 57.230 34.615 0.00 0.00 43.73 2.57
2352 3542 8.655092 GTGAGAGTCACTTTCTATTCTTTGATG 58.345 37.037 0.00 0.00 43.73 3.07
2353 3543 8.588472 TGAGAGTCACTTTCTATTCTTTGATGA 58.412 33.333 0.00 0.00 0.00 2.92
2354 3544 9.086336 GAGAGTCACTTTCTATTCTTTGATGAG 57.914 37.037 0.00 0.00 0.00 2.90
2355 3545 8.040132 AGAGTCACTTTCTATTCTTTGATGAGG 58.960 37.037 0.00 0.00 0.00 3.86
2356 3546 7.684529 AGTCACTTTCTATTCTTTGATGAGGT 58.315 34.615 0.00 0.00 0.00 3.85
2357 3547 7.821846 AGTCACTTTCTATTCTTTGATGAGGTC 59.178 37.037 0.00 0.00 0.00 3.85
2358 3548 7.604164 GTCACTTTCTATTCTTTGATGAGGTCA 59.396 37.037 0.00 0.00 34.25 4.02
2359 3549 7.604164 TCACTTTCTATTCTTTGATGAGGTCAC 59.396 37.037 0.00 0.00 36.32 3.67
2360 3550 7.605691 CACTTTCTATTCTTTGATGAGGTCACT 59.394 37.037 0.00 0.00 36.32 3.41
2361 3551 8.816894 ACTTTCTATTCTTTGATGAGGTCACTA 58.183 33.333 0.00 0.00 36.32 2.74
2362 3552 9.311916 CTTTCTATTCTTTGATGAGGTCACTAG 57.688 37.037 0.00 0.00 36.32 2.57
2363 3553 7.962995 TCTATTCTTTGATGAGGTCACTAGT 57.037 36.000 0.00 0.00 36.32 2.57
2364 3554 9.475620 TTCTATTCTTTGATGAGGTCACTAGTA 57.524 33.333 0.00 0.00 36.32 1.82
2365 3555 9.126151 TCTATTCTTTGATGAGGTCACTAGTAG 57.874 37.037 0.00 0.00 36.32 2.57
2366 3556 7.726033 ATTCTTTGATGAGGTCACTAGTAGT 57.274 36.000 0.00 0.00 36.32 2.73
2367 3557 8.824756 ATTCTTTGATGAGGTCACTAGTAGTA 57.175 34.615 1.57 0.00 36.32 1.82
2368 3558 7.867305 TCTTTGATGAGGTCACTAGTAGTAG 57.133 40.000 1.57 2.87 36.32 2.57
2369 3559 6.319152 TCTTTGATGAGGTCACTAGTAGTAGC 59.681 42.308 1.57 2.21 36.32 3.58
2370 3560 5.375283 TGATGAGGTCACTAGTAGTAGCT 57.625 43.478 1.57 6.81 0.00 3.32
2371 3561 5.756918 TGATGAGGTCACTAGTAGTAGCTT 58.243 41.667 1.57 0.00 0.00 3.74
2372 3562 5.590663 TGATGAGGTCACTAGTAGTAGCTTG 59.409 44.000 1.57 0.00 0.00 4.01
2373 3563 3.695060 TGAGGTCACTAGTAGTAGCTTGC 59.305 47.826 1.57 0.00 0.00 4.01
2374 3564 3.695060 GAGGTCACTAGTAGTAGCTTGCA 59.305 47.826 1.57 0.00 0.00 4.08
2375 3565 4.282496 AGGTCACTAGTAGTAGCTTGCAT 58.718 43.478 1.57 0.00 0.00 3.96
2376 3566 4.712337 AGGTCACTAGTAGTAGCTTGCATT 59.288 41.667 1.57 0.00 0.00 3.56
2377 3567 4.806247 GGTCACTAGTAGTAGCTTGCATTG 59.194 45.833 1.57 0.00 0.00 2.82
2378 3568 4.806247 GTCACTAGTAGTAGCTTGCATTGG 59.194 45.833 1.57 0.00 0.00 3.16
2379 3569 4.122776 CACTAGTAGTAGCTTGCATTGGG 58.877 47.826 1.57 0.00 0.00 4.12
2380 3570 2.717639 AGTAGTAGCTTGCATTGGGG 57.282 50.000 0.00 0.00 0.00 4.96
2381 3571 2.196595 AGTAGTAGCTTGCATTGGGGA 58.803 47.619 0.00 0.00 0.00 4.81
2382 3572 2.171448 AGTAGTAGCTTGCATTGGGGAG 59.829 50.000 0.00 0.00 0.00 4.30
2383 3573 1.289160 AGTAGCTTGCATTGGGGAGA 58.711 50.000 0.00 0.00 0.00 3.71
2384 3574 1.635487 AGTAGCTTGCATTGGGGAGAA 59.365 47.619 0.00 0.00 0.00 2.87
2385 3575 2.041620 AGTAGCTTGCATTGGGGAGAAA 59.958 45.455 0.00 0.00 0.00 2.52
2386 3576 2.014010 AGCTTGCATTGGGGAGAAAA 57.986 45.000 0.00 0.00 0.00 2.29
2387 3577 2.328319 AGCTTGCATTGGGGAGAAAAA 58.672 42.857 0.00 0.00 0.00 1.94
2388 3578 2.908351 AGCTTGCATTGGGGAGAAAAAT 59.092 40.909 0.00 0.00 0.00 1.82
2389 3579 3.328637 AGCTTGCATTGGGGAGAAAAATT 59.671 39.130 0.00 0.00 0.00 1.82
2390 3580 3.686241 GCTTGCATTGGGGAGAAAAATTC 59.314 43.478 0.00 0.00 0.00 2.17
2391 3581 4.803588 GCTTGCATTGGGGAGAAAAATTCA 60.804 41.667 0.00 0.00 0.00 2.57
2392 3582 4.970860 TGCATTGGGGAGAAAAATTCAA 57.029 36.364 0.00 0.00 0.00 2.69
2393 3583 4.640364 TGCATTGGGGAGAAAAATTCAAC 58.360 39.130 0.00 0.00 0.00 3.18
2394 3584 4.102210 TGCATTGGGGAGAAAAATTCAACA 59.898 37.500 0.00 0.00 0.00 3.33
2395 3585 4.452114 GCATTGGGGAGAAAAATTCAACAC 59.548 41.667 0.00 0.00 0.00 3.32
2396 3586 5.609423 CATTGGGGAGAAAAATTCAACACA 58.391 37.500 0.00 0.00 0.00 3.72
2397 3587 5.885449 TTGGGGAGAAAAATTCAACACAT 57.115 34.783 0.00 0.00 0.00 3.21
2398 3588 6.985653 TTGGGGAGAAAAATTCAACACATA 57.014 33.333 0.00 0.00 0.00 2.29
2399 3589 7.552050 TTGGGGAGAAAAATTCAACACATAT 57.448 32.000 0.00 0.00 0.00 1.78
2400 3590 6.934056 TGGGGAGAAAAATTCAACACATATG 58.066 36.000 0.00 0.00 0.00 1.78
2401 3591 5.812127 GGGGAGAAAAATTCAACACATATGC 59.188 40.000 1.58 0.00 0.00 3.14
2402 3592 6.351286 GGGGAGAAAAATTCAACACATATGCT 60.351 38.462 1.58 0.00 0.00 3.79
2403 3593 7.099120 GGGAGAAAAATTCAACACATATGCTT 58.901 34.615 1.58 0.00 0.00 3.91
2404 3594 7.276438 GGGAGAAAAATTCAACACATATGCTTC 59.724 37.037 1.58 0.00 0.00 3.86
2405 3595 7.814107 GGAGAAAAATTCAACACATATGCTTCA 59.186 33.333 1.58 0.00 0.00 3.02
2406 3596 9.195411 GAGAAAAATTCAACACATATGCTTCAA 57.805 29.630 1.58 0.00 0.00 2.69
2407 3597 9.545105 AGAAAAATTCAACACATATGCTTCAAA 57.455 25.926 1.58 0.00 0.00 2.69
2414 3604 9.979578 TTCAACACATATGCTTCAAATTACTTT 57.020 25.926 1.58 0.00 0.00 2.66
2415 3605 9.979578 TCAACACATATGCTTCAAATTACTTTT 57.020 25.926 1.58 0.00 0.00 2.27
2418 3608 9.762933 ACACATATGCTTCAAATTACTTTTTGT 57.237 25.926 1.58 0.00 37.73 2.83
2420 3610 9.979578 ACATATGCTTCAAATTACTTTTTGTCA 57.020 25.926 1.58 0.00 37.73 3.58
2424 3614 8.578308 TGCTTCAAATTACTTTTTGTCATGAG 57.422 30.769 0.00 0.00 37.73 2.90
2425 3615 7.652909 TGCTTCAAATTACTTTTTGTCATGAGG 59.347 33.333 0.00 0.00 37.73 3.86
2426 3616 7.359514 GCTTCAAATTACTTTTTGTCATGAGGC 60.360 37.037 0.00 0.00 37.73 4.70
2427 3617 7.048629 TCAAATTACTTTTTGTCATGAGGCA 57.951 32.000 0.00 0.00 37.73 4.75
2428 3618 7.669427 TCAAATTACTTTTTGTCATGAGGCAT 58.331 30.769 0.00 0.00 37.73 4.40
2429 3619 7.814107 TCAAATTACTTTTTGTCATGAGGCATC 59.186 33.333 0.00 0.00 37.73 3.91
2430 3620 7.472334 AATTACTTTTTGTCATGAGGCATCT 57.528 32.000 0.00 0.00 0.00 2.90
2431 3621 4.778534 ACTTTTTGTCATGAGGCATCTG 57.221 40.909 0.00 0.00 0.00 2.90
2432 3622 4.147321 ACTTTTTGTCATGAGGCATCTGT 58.853 39.130 0.00 0.00 0.00 3.41
2433 3623 5.316167 ACTTTTTGTCATGAGGCATCTGTA 58.684 37.500 0.00 0.00 0.00 2.74
2434 3624 5.948162 ACTTTTTGTCATGAGGCATCTGTAT 59.052 36.000 0.00 0.00 0.00 2.29
2435 3625 6.435277 ACTTTTTGTCATGAGGCATCTGTATT 59.565 34.615 0.00 0.00 0.00 1.89
2436 3626 6.441093 TTTTGTCATGAGGCATCTGTATTC 57.559 37.500 0.00 0.00 0.00 1.75
2437 3627 4.758773 TGTCATGAGGCATCTGTATTCA 57.241 40.909 0.00 0.00 0.00 2.57
2438 3628 5.300411 TGTCATGAGGCATCTGTATTCAT 57.700 39.130 0.00 0.00 0.00 2.57
2439 3629 6.423776 TGTCATGAGGCATCTGTATTCATA 57.576 37.500 0.00 0.00 0.00 2.15
2440 3630 7.012661 TGTCATGAGGCATCTGTATTCATAT 57.987 36.000 0.00 0.00 0.00 1.78
2441 3631 6.877322 TGTCATGAGGCATCTGTATTCATATG 59.123 38.462 0.00 0.00 33.25 1.78
2442 3632 5.878669 TCATGAGGCATCTGTATTCATATGC 59.121 40.000 12.46 12.46 46.44 3.14
2446 3636 4.691860 GCATCTGTATTCATATGCCACC 57.308 45.455 10.43 0.00 43.61 4.61
2447 3637 4.074259 GCATCTGTATTCATATGCCACCA 58.926 43.478 10.43 0.00 43.61 4.17
2448 3638 4.703575 GCATCTGTATTCATATGCCACCAT 59.296 41.667 10.43 0.00 43.61 3.55
2449 3639 5.184479 GCATCTGTATTCATATGCCACCATT 59.816 40.000 10.43 0.00 43.61 3.16
2450 3640 6.617879 CATCTGTATTCATATGCCACCATTG 58.382 40.000 0.00 0.00 32.85 2.82
2451 3641 5.693961 TCTGTATTCATATGCCACCATTGT 58.306 37.500 0.00 0.00 32.85 2.71
2452 3642 6.836242 TCTGTATTCATATGCCACCATTGTA 58.164 36.000 0.00 0.00 32.85 2.41
2453 3643 6.710295 TCTGTATTCATATGCCACCATTGTAC 59.290 38.462 0.00 0.00 32.85 2.90
2454 3644 6.360618 TGTATTCATATGCCACCATTGTACA 58.639 36.000 0.00 0.00 32.85 2.90
2455 3645 7.003482 TGTATTCATATGCCACCATTGTACAT 58.997 34.615 0.00 0.00 32.85 2.29
2456 3646 5.771153 TTCATATGCCACCATTGTACATG 57.229 39.130 0.00 0.00 32.85 3.21
2457 3647 3.569277 TCATATGCCACCATTGTACATGC 59.431 43.478 0.00 0.00 32.85 4.06
2458 3648 1.113788 ATGCCACCATTGTACATGCC 58.886 50.000 0.00 0.00 0.00 4.40
2459 3649 0.969917 TGCCACCATTGTACATGCCC 60.970 55.000 0.00 0.00 0.00 5.36
2535 3725 5.676811 ACCTCCAATTATATTCCTCCACCTT 59.323 40.000 0.00 0.00 0.00 3.50
2549 3739 5.059833 CCTCCACCTTATTACTGAAGATGC 58.940 45.833 0.00 0.00 0.00 3.91
2585 3775 4.340097 TCATCATTGGAAATGGCTAAGCTG 59.660 41.667 0.00 0.00 0.00 4.24
2628 3819 5.295787 TCATTCCTAACATTATTGTGCCGTC 59.704 40.000 0.00 0.00 35.83 4.79
2742 3935 7.228906 TCCTGATAAGATAACTCTGTCTTACGG 59.771 40.741 0.00 0.00 37.88 4.02
2777 3970 6.521133 GCGTAGATGTGATTTTTCTGTTTCTG 59.479 38.462 0.00 0.00 0.00 3.02
2778 3971 7.576236 CGTAGATGTGATTTTTCTGTTTCTGT 58.424 34.615 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.741321 ACCCTGGTAAATGCATTCAATG 57.259 40.909 13.38 0.00 0.00 2.82
4 5 4.046286 AGAACCCTGGTAAATGCATTCA 57.954 40.909 13.38 5.76 0.00 2.57
5 6 5.170748 CAAAGAACCCTGGTAAATGCATTC 58.829 41.667 13.38 0.46 0.00 2.67
6 7 4.563374 GCAAAGAACCCTGGTAAATGCATT 60.563 41.667 5.99 5.99 0.00 3.56
7 8 3.055891 GCAAAGAACCCTGGTAAATGCAT 60.056 43.478 0.00 0.00 0.00 3.96
8 9 2.298729 GCAAAGAACCCTGGTAAATGCA 59.701 45.455 0.00 0.00 0.00 3.96
10 11 2.233676 GGGCAAAGAACCCTGGTAAATG 59.766 50.000 0.00 0.00 44.68 2.32
11 12 2.536066 GGGCAAAGAACCCTGGTAAAT 58.464 47.619 0.00 0.00 44.68 1.40
13 14 3.757836 GGGCAAAGAACCCTGGTAA 57.242 52.632 0.00 0.00 44.68 2.85
20 21 5.483685 AAATAAAAGAGGGGCAAAGAACC 57.516 39.130 0.00 0.00 0.00 3.62
21 22 7.667557 ACTTAAATAAAAGAGGGGCAAAGAAC 58.332 34.615 0.00 0.00 0.00 3.01
22 23 7.849322 ACTTAAATAAAAGAGGGGCAAAGAA 57.151 32.000 0.00 0.00 0.00 2.52
23 24 7.849322 AACTTAAATAAAAGAGGGGCAAAGA 57.151 32.000 0.00 0.00 0.00 2.52
24 25 8.773645 CAAAACTTAAATAAAAGAGGGGCAAAG 58.226 33.333 0.00 0.00 0.00 2.77
26 27 8.024145 TCAAAACTTAAATAAAAGAGGGGCAA 57.976 30.769 0.00 0.00 0.00 4.52
27 28 7.256154 CCTCAAAACTTAAATAAAAGAGGGGCA 60.256 37.037 0.00 0.00 37.16 5.36
28 29 7.097192 CCTCAAAACTTAAATAAAAGAGGGGC 58.903 38.462 0.00 0.00 37.16 5.80
30 31 7.896811 AGCCTCAAAACTTAAATAAAAGAGGG 58.103 34.615 0.00 0.00 40.27 4.30
31 32 9.411801 GAAGCCTCAAAACTTAAATAAAAGAGG 57.588 33.333 0.00 0.00 42.24 3.69
32 33 9.411801 GGAAGCCTCAAAACTTAAATAAAAGAG 57.588 33.333 0.00 0.00 0.00 2.85
38 39 9.705290 GAAATTGGAAGCCTCAAAACTTAAATA 57.295 29.630 0.00 0.00 0.00 1.40
39 40 7.661437 GGAAATTGGAAGCCTCAAAACTTAAAT 59.339 33.333 0.00 0.00 0.00 1.40
40 41 6.989759 GGAAATTGGAAGCCTCAAAACTTAAA 59.010 34.615 0.00 0.00 0.00 1.52
41 42 6.463755 GGGAAATTGGAAGCCTCAAAACTTAA 60.464 38.462 0.00 0.00 0.00 1.85
42 43 5.011635 GGGAAATTGGAAGCCTCAAAACTTA 59.988 40.000 0.00 0.00 0.00 2.24
43 44 4.202357 GGGAAATTGGAAGCCTCAAAACTT 60.202 41.667 0.00 0.00 0.00 2.66
44 45 3.324846 GGGAAATTGGAAGCCTCAAAACT 59.675 43.478 0.00 0.00 0.00 2.66
45 46 3.324846 AGGGAAATTGGAAGCCTCAAAAC 59.675 43.478 0.00 0.00 0.00 2.43
46 47 3.578282 GAGGGAAATTGGAAGCCTCAAAA 59.422 43.478 0.00 0.00 0.00 2.44
47 48 3.165071 GAGGGAAATTGGAAGCCTCAAA 58.835 45.455 0.00 0.00 0.00 2.69
49 50 1.710244 TGAGGGAAATTGGAAGCCTCA 59.290 47.619 0.00 0.00 0.00 3.86
51 52 1.713078 ACTGAGGGAAATTGGAAGCCT 59.287 47.619 0.00 0.00 0.00 4.58
55 56 6.745794 AATTTGAACTGAGGGAAATTGGAA 57.254 33.333 0.00 0.00 29.09 3.53
56 57 6.326064 TGAAATTTGAACTGAGGGAAATTGGA 59.674 34.615 0.00 0.00 30.36 3.53
57 58 6.523840 TGAAATTTGAACTGAGGGAAATTGG 58.476 36.000 0.00 0.00 30.36 3.16
59 60 7.601705 TCTGAAATTTGAACTGAGGGAAATT 57.398 32.000 0.00 0.00 30.98 1.82
60 61 7.601705 TTCTGAAATTTGAACTGAGGGAAAT 57.398 32.000 0.00 0.00 0.00 2.17
61 62 7.601705 ATTCTGAAATTTGAACTGAGGGAAA 57.398 32.000 0.00 0.00 0.00 3.13
63 64 7.601705 AAATTCTGAAATTTGAACTGAGGGA 57.398 32.000 0.00 0.00 42.21 4.20
64 65 9.762933 TTTAAATTCTGAAATTTGAACTGAGGG 57.237 29.630 0.00 0.00 43.32 4.30
75 76 9.491675 TGTGCATCATGTTTAAATTCTGAAATT 57.508 25.926 0.00 0.00 36.64 1.82
76 77 8.928733 GTGTGCATCATGTTTAAATTCTGAAAT 58.071 29.630 0.00 0.00 0.00 2.17
77 78 7.924947 TGTGTGCATCATGTTTAAATTCTGAAA 59.075 29.630 0.00 0.00 0.00 2.69
78 79 7.432059 TGTGTGCATCATGTTTAAATTCTGAA 58.568 30.769 0.00 0.00 0.00 3.02
79 80 6.979465 TGTGTGCATCATGTTTAAATTCTGA 58.021 32.000 0.00 0.00 0.00 3.27
80 81 7.542824 TCATGTGTGCATCATGTTTAAATTCTG 59.457 33.333 23.97 6.22 42.03 3.02
81 82 7.604549 TCATGTGTGCATCATGTTTAAATTCT 58.395 30.769 23.97 0.00 42.03 2.40
82 83 7.815398 TCATGTGTGCATCATGTTTAAATTC 57.185 32.000 23.97 0.00 42.03 2.17
83 84 7.148540 GCTTCATGTGTGCATCATGTTTAAATT 60.149 33.333 23.97 0.00 42.03 1.82
84 85 6.311935 GCTTCATGTGTGCATCATGTTTAAAT 59.688 34.615 23.97 0.00 42.03 1.40
85 86 5.634439 GCTTCATGTGTGCATCATGTTTAAA 59.366 36.000 23.97 15.06 42.03 1.52
86 87 5.047872 AGCTTCATGTGTGCATCATGTTTAA 60.048 36.000 23.97 15.30 42.03 1.52
87 88 4.460034 AGCTTCATGTGTGCATCATGTTTA 59.540 37.500 23.97 14.81 42.03 2.01
89 90 2.823747 AGCTTCATGTGTGCATCATGTT 59.176 40.909 23.97 12.42 42.03 2.71
90 91 2.443416 AGCTTCATGTGTGCATCATGT 58.557 42.857 23.97 10.38 42.03 3.21
91 92 3.548214 GCTAGCTTCATGTGTGCATCATG 60.548 47.826 21.12 21.12 42.53 3.07
92 93 2.617308 GCTAGCTTCATGTGTGCATCAT 59.383 45.455 7.70 0.00 31.99 2.45
93 94 2.011947 GCTAGCTTCATGTGTGCATCA 58.988 47.619 7.70 0.00 31.99 3.07
94 95 1.332997 GGCTAGCTTCATGTGTGCATC 59.667 52.381 15.72 0.00 31.99 3.91
95 96 1.064906 AGGCTAGCTTCATGTGTGCAT 60.065 47.619 15.72 0.00 35.32 3.96
96 97 0.325933 AGGCTAGCTTCATGTGTGCA 59.674 50.000 15.72 0.00 0.00 4.57
98 99 3.715495 CTCTAGGCTAGCTTCATGTGTG 58.285 50.000 16.85 0.00 0.00 3.82
101 102 2.392662 TGCTCTAGGCTAGCTTCATGT 58.607 47.619 16.85 0.00 40.73 3.21
103 104 4.020662 GGTAATGCTCTAGGCTAGCTTCAT 60.021 45.833 16.85 14.80 40.73 2.57
104 105 3.322254 GGTAATGCTCTAGGCTAGCTTCA 59.678 47.826 16.85 13.31 40.73 3.02
105 106 3.322254 TGGTAATGCTCTAGGCTAGCTTC 59.678 47.826 16.85 8.34 40.73 3.86
106 107 3.309296 TGGTAATGCTCTAGGCTAGCTT 58.691 45.455 16.85 10.11 40.73 3.74
107 108 2.896685 CTGGTAATGCTCTAGGCTAGCT 59.103 50.000 16.85 3.22 40.73 3.32
108 109 2.894126 TCTGGTAATGCTCTAGGCTAGC 59.106 50.000 16.85 6.04 42.39 3.42
110 111 3.322254 GCTTCTGGTAATGCTCTAGGCTA 59.678 47.826 0.00 0.00 42.39 3.93
111 112 2.103941 GCTTCTGGTAATGCTCTAGGCT 59.896 50.000 0.00 0.00 42.39 4.58
113 114 4.021544 CCTAGCTTCTGGTAATGCTCTAGG 60.022 50.000 0.00 0.00 36.92 3.02
114 115 4.021544 CCCTAGCTTCTGGTAATGCTCTAG 60.022 50.000 0.00 0.00 37.02 2.43
115 116 3.898123 CCCTAGCTTCTGGTAATGCTCTA 59.102 47.826 0.00 0.00 37.02 2.43
116 117 2.703007 CCCTAGCTTCTGGTAATGCTCT 59.297 50.000 0.00 0.00 37.02 4.09
117 118 2.700897 TCCCTAGCTTCTGGTAATGCTC 59.299 50.000 0.00 0.00 37.02 4.26
118 119 2.764269 TCCCTAGCTTCTGGTAATGCT 58.236 47.619 0.00 0.00 39.30 3.79
119 120 3.181450 ACATCCCTAGCTTCTGGTAATGC 60.181 47.826 0.00 0.00 0.00 3.56
120 121 4.101585 TCACATCCCTAGCTTCTGGTAATG 59.898 45.833 0.00 1.87 0.00 1.90
121 122 4.101741 GTCACATCCCTAGCTTCTGGTAAT 59.898 45.833 0.00 0.00 0.00 1.89
122 123 3.451178 GTCACATCCCTAGCTTCTGGTAA 59.549 47.826 0.00 0.00 0.00 2.85
123 124 3.031736 GTCACATCCCTAGCTTCTGGTA 58.968 50.000 0.00 0.00 0.00 3.25
124 125 1.834263 GTCACATCCCTAGCTTCTGGT 59.166 52.381 0.00 0.00 0.00 4.00
125 126 1.833630 TGTCACATCCCTAGCTTCTGG 59.166 52.381 0.00 0.00 0.00 3.86
126 127 2.419297 GGTGTCACATCCCTAGCTTCTG 60.419 54.545 5.12 0.00 0.00 3.02
127 128 1.834263 GGTGTCACATCCCTAGCTTCT 59.166 52.381 5.12 0.00 0.00 2.85
128 129 1.834263 AGGTGTCACATCCCTAGCTTC 59.166 52.381 5.12 0.00 0.00 3.86
129 130 1.834263 GAGGTGTCACATCCCTAGCTT 59.166 52.381 6.35 0.00 0.00 3.74
130 131 1.007721 AGAGGTGTCACATCCCTAGCT 59.992 52.381 13.79 0.00 27.29 3.32
131 132 1.137872 CAGAGGTGTCACATCCCTAGC 59.862 57.143 13.79 0.00 27.29 3.42
132 133 1.759445 CCAGAGGTGTCACATCCCTAG 59.241 57.143 13.79 2.61 27.29 3.02
133 134 1.622449 CCCAGAGGTGTCACATCCCTA 60.622 57.143 13.79 0.00 27.29 3.53
134 135 0.911525 CCCAGAGGTGTCACATCCCT 60.912 60.000 13.79 0.00 27.29 4.20
135 136 0.909610 TCCCAGAGGTGTCACATCCC 60.910 60.000 13.79 0.00 27.29 3.85
137 138 0.539051 CCTCCCAGAGGTGTCACATC 59.461 60.000 9.62 9.62 44.25 3.06
138 139 2.689073 CCTCCCAGAGGTGTCACAT 58.311 57.895 5.12 0.00 44.25 3.21
139 140 4.215370 CCTCCCAGAGGTGTCACA 57.785 61.111 5.12 0.00 44.25 3.58
148 149 2.359404 GTCCCGTCTCCTCCCAGA 59.641 66.667 0.00 0.00 0.00 3.86
149 150 2.760385 GGTCCCGTCTCCTCCCAG 60.760 72.222 0.00 0.00 0.00 4.45
150 151 3.596799 TGGTCCCGTCTCCTCCCA 61.597 66.667 0.00 0.00 0.00 4.37
152 153 3.075641 GGTGGTCCCGTCTCCTCC 61.076 72.222 0.00 0.00 0.00 4.30
164 165 4.868116 AACGGCAGCAACGGTGGT 62.868 61.111 0.00 0.00 35.28 4.16
169 170 4.025401 GGACCAACGGCAGCAACG 62.025 66.667 0.00 0.00 37.36 4.10
171 172 2.281484 GAGGACCAACGGCAGCAA 60.281 61.111 0.00 0.00 0.00 3.91
179 180 1.002011 GGCAAGGAGGAGGACCAAC 60.002 63.158 0.00 0.00 38.94 3.77
180 181 2.592993 CGGCAAGGAGGAGGACCAA 61.593 63.158 0.00 0.00 38.94 3.67
230 232 2.027314 CGCCATCCTCGCTCTCTG 59.973 66.667 0.00 0.00 0.00 3.35
231 233 3.222855 CCGCCATCCTCGCTCTCT 61.223 66.667 0.00 0.00 0.00 3.10
254 256 0.537188 TCTCTTCATCAGGCGGTTCC 59.463 55.000 0.00 0.00 0.00 3.62
283 285 3.083349 TCCATGCAGGTAGGCGCT 61.083 61.111 7.64 0.00 39.02 5.92
284 286 2.590007 CTCCATGCAGGTAGGCGC 60.590 66.667 0.00 0.00 39.02 6.53
290 293 1.067295 TCTTGGTTCTCCATGCAGGT 58.933 50.000 0.00 0.00 43.91 4.00
320 323 1.303643 CCCCTCCAACTCCAACAGC 60.304 63.158 0.00 0.00 0.00 4.40
321 324 1.303643 GCCCCTCCAACTCCAACAG 60.304 63.158 0.00 0.00 0.00 3.16
322 325 1.774217 AGCCCCTCCAACTCCAACA 60.774 57.895 0.00 0.00 0.00 3.33
334 337 4.824515 CGTCCTCTCGGAGCCCCT 62.825 72.222 0.00 0.00 40.84 4.79
345 348 1.152839 CCTCCTCCTCTCCGTCCTC 60.153 68.421 0.00 0.00 0.00 3.71
417 420 1.627864 TTCGACTGGACTGGTCATGA 58.372 50.000 0.00 0.00 33.73 3.07
419 422 1.208052 CCATTCGACTGGACTGGTCAT 59.792 52.381 16.44 0.00 39.87 3.06
420 423 0.608130 CCATTCGACTGGACTGGTCA 59.392 55.000 16.44 0.00 39.87 4.02
440 443 0.526954 CATTGAAGCGGGCTGAATGC 60.527 55.000 0.00 0.00 41.94 3.56
442 445 1.811860 GCATTGAAGCGGGCTGAAT 59.188 52.632 0.00 0.00 0.00 2.57
467 470 2.143876 AGCAAACCAACTCCAACAGT 57.856 45.000 0.00 0.00 36.64 3.55
513 516 4.099170 CGACTTCTCGGGCGTCGT 62.099 66.667 15.82 0.00 43.82 4.34
582 585 1.376609 CCCAGAGTATGCAAACGGCC 61.377 60.000 0.00 0.00 43.89 6.13
587 590 1.077787 CCGGCCCAGAGTATGCAAA 60.078 57.895 0.00 0.00 0.00 3.68
605 608 2.574322 CTTGCCGCGTTATATTCATGC 58.426 47.619 4.92 0.00 0.00 4.06
633 636 1.732077 GCGCTTTTTCCATCGAATGCA 60.732 47.619 0.00 0.00 0.00 3.96
634 637 0.916581 GCGCTTTTTCCATCGAATGC 59.083 50.000 0.00 0.00 0.00 3.56
641 644 1.210155 GCACTCGCGCTTTTTCCAT 59.790 52.632 5.56 0.00 0.00 3.41
685 734 3.441922 TCCGCAAATCCGAAATGAAATGA 59.558 39.130 0.00 0.00 0.00 2.57
714 764 6.469410 TCGGTTTACTGACCAATCTAAACAT 58.531 36.000 0.00 0.00 39.78 2.71
715 765 5.856156 TCGGTTTACTGACCAATCTAAACA 58.144 37.500 0.00 0.00 39.78 2.83
716 766 6.370718 ACATCGGTTTACTGACCAATCTAAAC 59.629 38.462 0.00 0.00 39.78 2.01
720 770 4.553330 ACATCGGTTTACTGACCAATCT 57.447 40.909 0.00 0.00 39.78 2.40
721 771 6.423001 GGTATACATCGGTTTACTGACCAATC 59.577 42.308 5.01 0.00 39.78 2.67
724 774 4.957954 AGGTATACATCGGTTTACTGACCA 59.042 41.667 5.01 0.00 39.78 4.02
726 776 4.743644 GCAGGTATACATCGGTTTACTGAC 59.256 45.833 5.01 0.00 33.54 3.51
728 778 4.056050 GGCAGGTATACATCGGTTTACTG 58.944 47.826 5.01 0.84 33.54 2.74
729 779 3.965347 AGGCAGGTATACATCGGTTTACT 59.035 43.478 5.01 0.00 33.54 2.24
730 780 4.332428 AGGCAGGTATACATCGGTTTAC 57.668 45.455 5.01 0.00 32.62 2.01
732 782 3.199071 TCAAGGCAGGTATACATCGGTTT 59.801 43.478 5.01 0.00 0.00 3.27
735 785 3.469008 TTCAAGGCAGGTATACATCGG 57.531 47.619 5.01 0.00 0.00 4.18
736 786 3.748048 CCATTCAAGGCAGGTATACATCG 59.252 47.826 5.01 0.00 0.00 3.84
754 1737 1.272212 GTCGGGATGTGTTTTGCCATT 59.728 47.619 0.00 0.00 0.00 3.16
786 1769 0.810648 TAAACATCCGTAGCCGTCGT 59.189 50.000 0.00 0.00 0.00 4.34
795 1778 0.392060 GCGGACCCTTAAACATCCGT 60.392 55.000 17.48 0.00 0.00 4.69
796 1779 1.426041 CGCGGACCCTTAAACATCCG 61.426 60.000 13.84 13.84 0.00 4.18
819 1802 5.072741 TCTTTTTCTGCCTTGTAGCATCTT 58.927 37.500 0.00 0.00 43.09 2.40
827 1810 4.383010 CCAGGTTTTCTTTTTCTGCCTTGT 60.383 41.667 0.00 0.00 0.00 3.16
828 1811 4.122046 CCAGGTTTTCTTTTTCTGCCTTG 58.878 43.478 0.00 0.00 0.00 3.61
945 1938 3.119101 GGACTGTGTACCGAACTGATGAT 60.119 47.826 0.00 0.00 0.00 2.45
946 1939 2.230508 GGACTGTGTACCGAACTGATGA 59.769 50.000 0.00 0.00 0.00 2.92
947 1940 2.607187 GGACTGTGTACCGAACTGATG 58.393 52.381 0.00 0.00 0.00 3.07
1236 2407 2.900546 ACGAGTCCTTGAACCAGAAGAT 59.099 45.455 0.00 0.00 0.00 2.40
1641 2822 9.476202 TCTCTAATAATATACATGTGCACACAC 57.524 33.333 24.37 0.00 45.05 3.82
1736 2917 9.095065 GACCAAATACAAATCGAACAGTATACT 57.905 33.333 0.00 0.00 0.00 2.12
1737 2918 8.333186 GGACCAAATACAAATCGAACAGTATAC 58.667 37.037 0.00 0.00 0.00 1.47
1738 2919 8.262227 AGGACCAAATACAAATCGAACAGTATA 58.738 33.333 0.00 0.00 0.00 1.47
1739 2920 7.110155 AGGACCAAATACAAATCGAACAGTAT 58.890 34.615 0.00 0.00 0.00 2.12
1774 2955 9.944376 GGCTTGAGATATACACTTGGATAATAA 57.056 33.333 0.00 0.00 0.00 1.40
1775 2956 8.251026 CGGCTTGAGATATACACTTGGATAATA 58.749 37.037 0.00 0.00 0.00 0.98
1776 2957 7.099764 CGGCTTGAGATATACACTTGGATAAT 58.900 38.462 0.00 0.00 0.00 1.28
1823 3004 5.357032 ACAGAAGTCAAAAACACCGAGAAAT 59.643 36.000 0.00 0.00 0.00 2.17
1973 3156 5.088739 GCTTTGAGTTCATAATGGTCAACG 58.911 41.667 0.00 0.00 0.00 4.10
2021 3210 1.420532 AAGGCAACGGAGGGTTACCA 61.421 55.000 2.98 0.00 43.47 3.25
2024 3213 0.323629 CTGAAGGCAACGGAGGGTTA 59.676 55.000 0.00 0.00 46.39 2.85
2033 3222 4.065088 TGTTGATACTGACTGAAGGCAAC 58.935 43.478 0.00 0.00 36.02 4.17
2101 3290 7.530010 AGCTTATAAAACACAAGCACTACATG 58.470 34.615 8.12 0.00 45.63 3.21
2222 3412 4.237207 GATCCCGCTTCCCCGTCC 62.237 72.222 0.00 0.00 0.00 4.79
2223 3413 4.237207 GGATCCCGCTTCCCCGTC 62.237 72.222 0.00 0.00 0.00 4.79
2224 3414 4.798682 AGGATCCCGCTTCCCCGT 62.799 66.667 8.55 0.00 33.45 5.28
2225 3415 3.930012 GAGGATCCCGCTTCCCCG 61.930 72.222 8.55 0.00 33.45 5.73
2226 3416 2.446802 AGAGGATCCCGCTTCCCC 60.447 66.667 8.55 0.00 33.66 4.81
2227 3417 2.512355 GGAGAGGATCCCGCTTCCC 61.512 68.421 8.55 1.29 43.01 3.97
2228 3418 3.143338 GGAGAGGATCCCGCTTCC 58.857 66.667 8.55 6.90 43.01 3.46
2240 3430 2.664081 GCACCCACCTCCTGGAGAG 61.664 68.421 25.18 16.48 43.95 3.20
2241 3431 2.607750 GCACCCACCTCCTGGAGA 60.608 66.667 25.18 0.00 43.95 3.71
2242 3432 0.909610 TAAGCACCCACCTCCTGGAG 60.910 60.000 17.02 17.02 43.95 3.86
2243 3433 0.909610 CTAAGCACCCACCTCCTGGA 60.910 60.000 0.00 0.00 43.95 3.86
2244 3434 0.909610 TCTAAGCACCCACCTCCTGG 60.910 60.000 0.00 0.00 40.26 4.45
2245 3435 0.539051 CTCTAAGCACCCACCTCCTG 59.461 60.000 0.00 0.00 0.00 3.86
2246 3436 0.413832 TCTCTAAGCACCCACCTCCT 59.586 55.000 0.00 0.00 0.00 3.69
2247 3437 0.537653 GTCTCTAAGCACCCACCTCC 59.462 60.000 0.00 0.00 0.00 4.30
2248 3438 1.267121 TGTCTCTAAGCACCCACCTC 58.733 55.000 0.00 0.00 0.00 3.85
2249 3439 1.729586 TTGTCTCTAAGCACCCACCT 58.270 50.000 0.00 0.00 0.00 4.00
2250 3440 2.561478 TTTGTCTCTAAGCACCCACC 57.439 50.000 0.00 0.00 0.00 4.61
2251 3441 3.883489 ACTTTTTGTCTCTAAGCACCCAC 59.117 43.478 0.00 0.00 0.00 4.61
2252 3442 4.164843 ACTTTTTGTCTCTAAGCACCCA 57.835 40.909 0.00 0.00 0.00 4.51
2253 3443 4.023107 GGAACTTTTTGTCTCTAAGCACCC 60.023 45.833 0.00 0.00 0.00 4.61
2254 3444 4.319549 CGGAACTTTTTGTCTCTAAGCACC 60.320 45.833 0.00 0.00 0.00 5.01
2255 3445 4.319549 CCGGAACTTTTTGTCTCTAAGCAC 60.320 45.833 0.00 0.00 0.00 4.40
2256 3446 3.813166 CCGGAACTTTTTGTCTCTAAGCA 59.187 43.478 0.00 0.00 0.00 3.91
2257 3447 3.813724 ACCGGAACTTTTTGTCTCTAAGC 59.186 43.478 9.46 0.00 0.00 3.09
2258 3448 4.319549 GCACCGGAACTTTTTGTCTCTAAG 60.320 45.833 9.46 0.00 0.00 2.18
2259 3449 3.562557 GCACCGGAACTTTTTGTCTCTAA 59.437 43.478 9.46 0.00 0.00 2.10
2260 3450 3.135994 GCACCGGAACTTTTTGTCTCTA 58.864 45.455 9.46 0.00 0.00 2.43
2261 3451 1.947456 GCACCGGAACTTTTTGTCTCT 59.053 47.619 9.46 0.00 0.00 3.10
2262 3452 1.673920 TGCACCGGAACTTTTTGTCTC 59.326 47.619 9.46 0.00 0.00 3.36
2263 3453 1.757682 TGCACCGGAACTTTTTGTCT 58.242 45.000 9.46 0.00 0.00 3.41
2264 3454 2.793278 ATGCACCGGAACTTTTTGTC 57.207 45.000 9.46 0.00 0.00 3.18
2265 3455 4.098807 ACTTTATGCACCGGAACTTTTTGT 59.901 37.500 9.46 0.00 0.00 2.83
2266 3456 4.616953 ACTTTATGCACCGGAACTTTTTG 58.383 39.130 9.46 0.00 0.00 2.44
2267 3457 4.929819 ACTTTATGCACCGGAACTTTTT 57.070 36.364 9.46 0.00 0.00 1.94
2268 3458 4.339814 TCAACTTTATGCACCGGAACTTTT 59.660 37.500 9.46 0.00 0.00 2.27
2269 3459 3.886505 TCAACTTTATGCACCGGAACTTT 59.113 39.130 9.46 0.00 0.00 2.66
2270 3460 3.482436 TCAACTTTATGCACCGGAACTT 58.518 40.909 9.46 0.00 0.00 2.66
2271 3461 3.134574 TCAACTTTATGCACCGGAACT 57.865 42.857 9.46 0.00 0.00 3.01
2272 3462 3.907894 TTCAACTTTATGCACCGGAAC 57.092 42.857 9.46 0.00 0.00 3.62
2273 3463 4.920640 TTTTCAACTTTATGCACCGGAA 57.079 36.364 9.46 0.00 0.00 4.30
2274 3464 4.339814 ACTTTTTCAACTTTATGCACCGGA 59.660 37.500 9.46 0.00 0.00 5.14
2275 3465 4.616953 ACTTTTTCAACTTTATGCACCGG 58.383 39.130 0.00 0.00 0.00 5.28
2276 3466 5.746245 TCAACTTTTTCAACTTTATGCACCG 59.254 36.000 0.00 0.00 0.00 4.94
2277 3467 7.532682 TTCAACTTTTTCAACTTTATGCACC 57.467 32.000 0.00 0.00 0.00 5.01
2278 3468 9.424659 CATTTCAACTTTTTCAACTTTATGCAC 57.575 29.630 0.00 0.00 0.00 4.57
2279 3469 8.610896 CCATTTCAACTTTTTCAACTTTATGCA 58.389 29.630 0.00 0.00 0.00 3.96
2280 3470 8.825745 TCCATTTCAACTTTTTCAACTTTATGC 58.174 29.630 0.00 0.00 0.00 3.14
2283 3473 9.801873 CTCTCCATTTCAACTTTTTCAACTTTA 57.198 29.630 0.00 0.00 0.00 1.85
2284 3474 7.765819 CCTCTCCATTTCAACTTTTTCAACTTT 59.234 33.333 0.00 0.00 0.00 2.66
2285 3475 7.124147 TCCTCTCCATTTCAACTTTTTCAACTT 59.876 33.333 0.00 0.00 0.00 2.66
2286 3476 6.607198 TCCTCTCCATTTCAACTTTTTCAACT 59.393 34.615 0.00 0.00 0.00 3.16
2287 3477 6.805713 TCCTCTCCATTTCAACTTTTTCAAC 58.194 36.000 0.00 0.00 0.00 3.18
2288 3478 6.040842 CCTCCTCTCCATTTCAACTTTTTCAA 59.959 38.462 0.00 0.00 0.00 2.69
2289 3479 5.536161 CCTCCTCTCCATTTCAACTTTTTCA 59.464 40.000 0.00 0.00 0.00 2.69
2290 3480 5.047731 CCCTCCTCTCCATTTCAACTTTTTC 60.048 44.000 0.00 0.00 0.00 2.29
2291 3481 4.835056 CCCTCCTCTCCATTTCAACTTTTT 59.165 41.667 0.00 0.00 0.00 1.94
2292 3482 4.106341 TCCCTCCTCTCCATTTCAACTTTT 59.894 41.667 0.00 0.00 0.00 2.27
2293 3483 3.657727 TCCCTCCTCTCCATTTCAACTTT 59.342 43.478 0.00 0.00 0.00 2.66
2294 3484 3.260205 TCCCTCCTCTCCATTTCAACTT 58.740 45.455 0.00 0.00 0.00 2.66
2295 3485 2.921221 TCCCTCCTCTCCATTTCAACT 58.079 47.619 0.00 0.00 0.00 3.16
2296 3486 3.549794 CATCCCTCCTCTCCATTTCAAC 58.450 50.000 0.00 0.00 0.00 3.18
2297 3487 2.092212 GCATCCCTCCTCTCCATTTCAA 60.092 50.000 0.00 0.00 0.00 2.69
2298 3488 1.492176 GCATCCCTCCTCTCCATTTCA 59.508 52.381 0.00 0.00 0.00 2.69
2299 3489 1.492176 TGCATCCCTCCTCTCCATTTC 59.508 52.381 0.00 0.00 0.00 2.17
2300 3490 1.600058 TGCATCCCTCCTCTCCATTT 58.400 50.000 0.00 0.00 0.00 2.32
2301 3491 1.424302 CATGCATCCCTCCTCTCCATT 59.576 52.381 0.00 0.00 0.00 3.16
2302 3492 1.065647 CATGCATCCCTCCTCTCCAT 58.934 55.000 0.00 0.00 0.00 3.41
2303 3493 0.326904 ACATGCATCCCTCCTCTCCA 60.327 55.000 0.00 0.00 0.00 3.86
2304 3494 0.108207 CACATGCATCCCTCCTCTCC 59.892 60.000 0.00 0.00 0.00 3.71
2305 3495 0.835941 ACACATGCATCCCTCCTCTC 59.164 55.000 0.00 0.00 0.00 3.20
2306 3496 2.045524 CTACACATGCATCCCTCCTCT 58.954 52.381 0.00 0.00 0.00 3.69
2307 3497 1.765314 ACTACACATGCATCCCTCCTC 59.235 52.381 0.00 0.00 0.00 3.71
2308 3498 1.487976 CACTACACATGCATCCCTCCT 59.512 52.381 0.00 0.00 0.00 3.69
2309 3499 1.486310 TCACTACACATGCATCCCTCC 59.514 52.381 0.00 0.00 0.00 4.30
2310 3500 2.432146 TCTCACTACACATGCATCCCTC 59.568 50.000 0.00 0.00 0.00 4.30
2311 3501 2.433604 CTCTCACTACACATGCATCCCT 59.566 50.000 0.00 0.00 0.00 4.20
2312 3502 2.169352 ACTCTCACTACACATGCATCCC 59.831 50.000 0.00 0.00 0.00 3.85
2313 3503 3.118992 TGACTCTCACTACACATGCATCC 60.119 47.826 0.00 0.00 0.00 3.51
2314 3504 3.862267 GTGACTCTCACTACACATGCATC 59.138 47.826 0.00 0.00 43.73 3.91
2315 3505 3.854666 GTGACTCTCACTACACATGCAT 58.145 45.455 0.00 0.00 43.73 3.96
2316 3506 3.303881 GTGACTCTCACTACACATGCA 57.696 47.619 0.00 0.00 43.73 3.96
2327 3517 8.588472 TCATCAAAGAATAGAAAGTGACTCTCA 58.412 33.333 0.00 0.00 0.00 3.27
2328 3518 8.994429 TCATCAAAGAATAGAAAGTGACTCTC 57.006 34.615 0.00 0.00 0.00 3.20
2329 3519 8.040132 CCTCATCAAAGAATAGAAAGTGACTCT 58.960 37.037 0.00 0.00 0.00 3.24
2330 3520 7.821846 ACCTCATCAAAGAATAGAAAGTGACTC 59.178 37.037 0.00 0.00 0.00 3.36
2331 3521 7.684529 ACCTCATCAAAGAATAGAAAGTGACT 58.315 34.615 0.00 0.00 0.00 3.41
2332 3522 7.604164 TGACCTCATCAAAGAATAGAAAGTGAC 59.396 37.037 0.00 0.00 33.02 3.67
2333 3523 7.604164 GTGACCTCATCAAAGAATAGAAAGTGA 59.396 37.037 0.00 0.00 39.72 3.41
2334 3524 7.605691 AGTGACCTCATCAAAGAATAGAAAGTG 59.394 37.037 0.00 0.00 39.72 3.16
2335 3525 7.684529 AGTGACCTCATCAAAGAATAGAAAGT 58.315 34.615 0.00 0.00 39.72 2.66
2336 3526 9.311916 CTAGTGACCTCATCAAAGAATAGAAAG 57.688 37.037 0.00 0.00 39.72 2.62
2337 3527 8.816894 ACTAGTGACCTCATCAAAGAATAGAAA 58.183 33.333 0.00 0.00 39.72 2.52
2338 3528 8.367660 ACTAGTGACCTCATCAAAGAATAGAA 57.632 34.615 0.00 0.00 39.72 2.10
2339 3529 7.962995 ACTAGTGACCTCATCAAAGAATAGA 57.037 36.000 0.00 0.00 39.72 1.98
2340 3530 8.908903 ACTACTAGTGACCTCATCAAAGAATAG 58.091 37.037 5.39 0.00 39.72 1.73
2341 3531 8.824756 ACTACTAGTGACCTCATCAAAGAATA 57.175 34.615 5.39 0.00 39.72 1.75
2342 3532 7.726033 ACTACTAGTGACCTCATCAAAGAAT 57.274 36.000 5.39 0.00 39.72 2.40
2343 3533 7.148052 GCTACTACTAGTGACCTCATCAAAGAA 60.148 40.741 5.39 0.00 39.72 2.52
2344 3534 6.319152 GCTACTACTAGTGACCTCATCAAAGA 59.681 42.308 5.39 0.00 39.72 2.52
2345 3535 6.320164 AGCTACTACTAGTGACCTCATCAAAG 59.680 42.308 5.39 0.00 39.72 2.77
2346 3536 6.188407 AGCTACTACTAGTGACCTCATCAAA 58.812 40.000 5.39 0.00 39.72 2.69
2347 3537 5.756918 AGCTACTACTAGTGACCTCATCAA 58.243 41.667 5.39 0.00 39.72 2.57
2348 3538 5.375283 AGCTACTACTAGTGACCTCATCA 57.625 43.478 5.39 0.00 33.79 3.07
2349 3539 5.506649 GCAAGCTACTACTAGTGACCTCATC 60.507 48.000 5.39 0.00 0.00 2.92
2350 3540 4.339814 GCAAGCTACTACTAGTGACCTCAT 59.660 45.833 5.39 0.00 0.00 2.90
2351 3541 3.695060 GCAAGCTACTACTAGTGACCTCA 59.305 47.826 5.39 0.00 0.00 3.86
2352 3542 3.695060 TGCAAGCTACTACTAGTGACCTC 59.305 47.826 5.39 0.00 0.00 3.85
2353 3543 3.698289 TGCAAGCTACTACTAGTGACCT 58.302 45.455 5.39 0.00 0.00 3.85
2354 3544 4.657436 ATGCAAGCTACTACTAGTGACC 57.343 45.455 5.39 0.00 0.00 4.02
2355 3545 4.806247 CCAATGCAAGCTACTACTAGTGAC 59.194 45.833 5.39 0.00 0.00 3.67
2356 3546 4.141937 CCCAATGCAAGCTACTACTAGTGA 60.142 45.833 5.39 0.00 0.00 3.41
2357 3547 4.122776 CCCAATGCAAGCTACTACTAGTG 58.877 47.826 5.39 0.00 0.00 2.74
2358 3548 3.134804 CCCCAATGCAAGCTACTACTAGT 59.865 47.826 0.00 0.00 0.00 2.57
2359 3549 3.388024 TCCCCAATGCAAGCTACTACTAG 59.612 47.826 0.00 0.00 0.00 2.57
2360 3550 3.380393 TCCCCAATGCAAGCTACTACTA 58.620 45.455 0.00 0.00 0.00 1.82
2361 3551 2.171448 CTCCCCAATGCAAGCTACTACT 59.829 50.000 0.00 0.00 0.00 2.57
2362 3552 2.170607 TCTCCCCAATGCAAGCTACTAC 59.829 50.000 0.00 0.00 0.00 2.73
2363 3553 2.477245 TCTCCCCAATGCAAGCTACTA 58.523 47.619 0.00 0.00 0.00 1.82
2364 3554 1.289160 TCTCCCCAATGCAAGCTACT 58.711 50.000 0.00 0.00 0.00 2.57
2365 3555 2.128771 TTCTCCCCAATGCAAGCTAC 57.871 50.000 0.00 0.00 0.00 3.58
2366 3556 2.897271 TTTCTCCCCAATGCAAGCTA 57.103 45.000 0.00 0.00 0.00 3.32
2367 3557 2.014010 TTTTCTCCCCAATGCAAGCT 57.986 45.000 0.00 0.00 0.00 3.74
2368 3558 2.837532 TTTTTCTCCCCAATGCAAGC 57.162 45.000 0.00 0.00 0.00 4.01
2369 3559 4.897140 TGAATTTTTCTCCCCAATGCAAG 58.103 39.130 0.00 0.00 0.00 4.01
2370 3560 4.970860 TGAATTTTTCTCCCCAATGCAA 57.029 36.364 0.00 0.00 0.00 4.08
2371 3561 4.102210 TGTTGAATTTTTCTCCCCAATGCA 59.898 37.500 0.00 0.00 0.00 3.96
2372 3562 4.452114 GTGTTGAATTTTTCTCCCCAATGC 59.548 41.667 0.00 0.00 0.00 3.56
2373 3563 5.609423 TGTGTTGAATTTTTCTCCCCAATG 58.391 37.500 0.00 0.00 0.00 2.82
2374 3564 5.885449 TGTGTTGAATTTTTCTCCCCAAT 57.115 34.783 0.00 0.00 0.00 3.16
2375 3565 5.885449 ATGTGTTGAATTTTTCTCCCCAA 57.115 34.783 0.00 0.00 0.00 4.12
2376 3566 6.574073 GCATATGTGTTGAATTTTTCTCCCCA 60.574 38.462 4.29 0.00 0.00 4.96
2377 3567 5.812127 GCATATGTGTTGAATTTTTCTCCCC 59.188 40.000 4.29 0.00 0.00 4.81
2378 3568 6.633856 AGCATATGTGTTGAATTTTTCTCCC 58.366 36.000 4.29 0.00 0.00 4.30
2379 3569 7.814107 TGAAGCATATGTGTTGAATTTTTCTCC 59.186 33.333 4.29 0.00 0.00 3.71
2380 3570 8.746922 TGAAGCATATGTGTTGAATTTTTCTC 57.253 30.769 4.29 0.00 0.00 2.87
2381 3571 9.545105 TTTGAAGCATATGTGTTGAATTTTTCT 57.455 25.926 4.29 0.00 0.00 2.52
2388 3578 9.979578 AAAGTAATTTGAAGCATATGTGTTGAA 57.020 25.926 4.29 0.00 0.00 2.69
2389 3579 9.979578 AAAAGTAATTTGAAGCATATGTGTTGA 57.020 25.926 4.29 0.00 0.00 3.18
2392 3582 9.762933 ACAAAAAGTAATTTGAAGCATATGTGT 57.237 25.926 4.29 0.00 41.73 3.72
2394 3584 9.979578 TGACAAAAAGTAATTTGAAGCATATGT 57.020 25.926 4.29 0.00 41.73 2.29
2398 3588 9.199982 CTCATGACAAAAAGTAATTTGAAGCAT 57.800 29.630 6.76 4.86 41.73 3.79
2399 3589 7.652909 CCTCATGACAAAAAGTAATTTGAAGCA 59.347 33.333 6.76 3.04 41.73 3.91
2400 3590 7.359514 GCCTCATGACAAAAAGTAATTTGAAGC 60.360 37.037 6.76 0.00 41.73 3.86
2401 3591 7.652909 TGCCTCATGACAAAAAGTAATTTGAAG 59.347 33.333 6.76 0.00 41.73 3.02
2402 3592 7.495901 TGCCTCATGACAAAAAGTAATTTGAA 58.504 30.769 6.76 0.00 41.73 2.69
2403 3593 7.048629 TGCCTCATGACAAAAAGTAATTTGA 57.951 32.000 6.76 0.00 41.73 2.69
2404 3594 7.816031 AGATGCCTCATGACAAAAAGTAATTTG 59.184 33.333 0.00 0.00 44.11 2.32
2405 3595 7.816031 CAGATGCCTCATGACAAAAAGTAATTT 59.184 33.333 0.00 0.00 0.00 1.82
2406 3596 7.039504 ACAGATGCCTCATGACAAAAAGTAATT 60.040 33.333 0.00 0.00 0.00 1.40
2407 3597 6.435277 ACAGATGCCTCATGACAAAAAGTAAT 59.565 34.615 0.00 0.00 0.00 1.89
2408 3598 5.769662 ACAGATGCCTCATGACAAAAAGTAA 59.230 36.000 0.00 0.00 0.00 2.24
2409 3599 5.316167 ACAGATGCCTCATGACAAAAAGTA 58.684 37.500 0.00 0.00 0.00 2.24
2410 3600 4.147321 ACAGATGCCTCATGACAAAAAGT 58.853 39.130 0.00 0.00 0.00 2.66
2411 3601 4.778534 ACAGATGCCTCATGACAAAAAG 57.221 40.909 0.00 0.00 0.00 2.27
2412 3602 6.433716 TGAATACAGATGCCTCATGACAAAAA 59.566 34.615 0.00 0.00 0.00 1.94
2413 3603 5.945191 TGAATACAGATGCCTCATGACAAAA 59.055 36.000 0.00 0.00 0.00 2.44
2414 3604 5.499313 TGAATACAGATGCCTCATGACAAA 58.501 37.500 0.00 0.00 0.00 2.83
2415 3605 5.101648 TGAATACAGATGCCTCATGACAA 57.898 39.130 0.00 0.00 0.00 3.18
2416 3606 4.758773 TGAATACAGATGCCTCATGACA 57.241 40.909 0.00 0.00 0.00 3.58
2417 3607 7.304919 CATATGAATACAGATGCCTCATGAC 57.695 40.000 0.00 0.00 38.56 3.06
2426 3616 6.208007 ACAATGGTGGCATATGAATACAGATG 59.792 38.462 6.97 0.00 45.17 2.90
2427 3617 6.309357 ACAATGGTGGCATATGAATACAGAT 58.691 36.000 6.97 0.00 0.00 2.90
2428 3618 5.693961 ACAATGGTGGCATATGAATACAGA 58.306 37.500 6.97 0.00 0.00 3.41
2429 3619 6.486320 TGTACAATGGTGGCATATGAATACAG 59.514 38.462 6.97 0.00 0.00 2.74
2430 3620 6.360618 TGTACAATGGTGGCATATGAATACA 58.639 36.000 6.97 0.00 0.00 2.29
2431 3621 6.875948 TGTACAATGGTGGCATATGAATAC 57.124 37.500 6.97 1.49 0.00 1.89
2432 3622 6.072008 GCATGTACAATGGTGGCATATGAATA 60.072 38.462 6.97 0.00 0.00 1.75
2433 3623 5.279106 GCATGTACAATGGTGGCATATGAAT 60.279 40.000 6.97 0.00 0.00 2.57
2434 3624 4.037803 GCATGTACAATGGTGGCATATGAA 59.962 41.667 6.97 0.00 0.00 2.57
2435 3625 3.569277 GCATGTACAATGGTGGCATATGA 59.431 43.478 6.97 0.00 0.00 2.15
2436 3626 3.305539 GGCATGTACAATGGTGGCATATG 60.306 47.826 14.01 0.00 37.14 1.78
2437 3627 2.892852 GGCATGTACAATGGTGGCATAT 59.107 45.455 14.01 0.00 37.14 1.78
2438 3628 2.305928 GGCATGTACAATGGTGGCATA 58.694 47.619 14.01 0.00 37.14 3.14
2439 3629 1.113788 GGCATGTACAATGGTGGCAT 58.886 50.000 14.01 0.00 37.14 4.40
2440 3630 0.969917 GGGCATGTACAATGGTGGCA 60.970 55.000 18.87 0.00 38.72 4.92
2441 3631 0.684153 AGGGCATGTACAATGGTGGC 60.684 55.000 11.25 11.25 36.52 5.01
2442 3632 2.727123 TAGGGCATGTACAATGGTGG 57.273 50.000 0.00 0.00 0.00 4.61
2443 3633 2.358898 GCTTAGGGCATGTACAATGGTG 59.641 50.000 0.00 0.00 41.35 4.17
2444 3634 2.654863 GCTTAGGGCATGTACAATGGT 58.345 47.619 0.00 0.00 41.35 3.55
2535 3725 3.391296 GGGACCTGGCATCTTCAGTAATA 59.609 47.826 0.00 0.00 0.00 0.98
2628 3819 2.167693 ACCACATGTATCTACCACGTGG 59.832 50.000 32.83 32.83 41.06 4.94
2742 3935 0.671251 ACATCTACGCAGCTAGCCTC 59.329 55.000 12.13 2.09 41.38 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.