Multiple sequence alignment - TraesCS3A01G365100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G365100 chr3A 100.000 4458 0 0 1 4458 614542289 614537832 0.000000e+00 8233.0
1 TraesCS3A01G365100 chr3D 93.568 1928 75 21 347 2245 471776683 471774776 0.000000e+00 2828.0
2 TraesCS3A01G365100 chr3D 90.275 1018 73 13 2918 3914 471773939 471772927 0.000000e+00 1308.0
3 TraesCS3A01G365100 chr3D 93.935 676 27 5 2248 2910 471774654 471773980 0.000000e+00 1009.0
4 TraesCS3A01G365100 chr3D 93.421 76 4 1 4212 4286 471772791 471772716 1.310000e-20 111.0
5 TraesCS3A01G365100 chr3B 92.090 2010 91 26 283 2249 627214635 627212651 0.000000e+00 2769.0
6 TraesCS3A01G365100 chr3B 94.045 1528 67 8 2343 3868 627212311 627210806 0.000000e+00 2296.0
7 TraesCS3A01G365100 chr3B 82.743 226 19 11 3973 4189 627210811 627210597 2.740000e-42 183.0
8 TraesCS3A01G365100 chr3B 93.814 97 6 0 2248 2344 627212531 627212435 3.590000e-31 147.0
9 TraesCS3A01G365100 chr3B 94.203 69 3 1 4212 4279 627210600 627210532 2.190000e-18 104.0
10 TraesCS3A01G365100 chr2A 92.708 288 17 4 1 284 507026701 507026988 3.210000e-111 412.0
11 TraesCS3A01G365100 chr5A 91.579 285 16 3 1 284 139923016 139922739 1.940000e-103 387.0
12 TraesCS3A01G365100 chr2B 91.228 285 22 3 1 284 38352742 38353024 7.000000e-103 385.0
13 TraesCS3A01G365100 chr2B 90.753 292 19 3 1 284 794995782 794996073 2.520000e-102 383.0
14 TraesCS3A01G365100 chr2B 90.476 294 20 3 1 286 794006456 794006163 9.050000e-102 381.0
15 TraesCS3A01G365100 chr5B 89.933 298 22 3 1 291 523205583 523205879 1.170000e-100 377.0
16 TraesCS3A01G365100 chr7B 89.726 292 21 4 1 284 635017088 635016798 9.110000e-97 364.0
17 TraesCS3A01G365100 chr7B 79.503 161 28 5 4282 4439 533842117 533842275 4.710000e-20 110.0
18 TraesCS3A01G365100 chr6A 89.347 291 23 4 1 284 594813641 594813930 4.240000e-95 359.0
19 TraesCS3A01G365100 chr4D 89.384 292 20 7 1 286 60119493 60119779 1.520000e-94 357.0
20 TraesCS3A01G365100 chr1D 82.135 431 55 9 1129 1542 377188191 377188616 2.550000e-92 350.0
21 TraesCS3A01G365100 chr1A 82.028 434 53 12 1129 1542 477731378 477731806 3.300000e-91 346.0
22 TraesCS3A01G365100 chr1A 84.375 96 15 0 4349 4444 474555117 474555212 1.320000e-15 95.3
23 TraesCS3A01G365100 chr1B 81.628 430 59 7 1129 1542 504089139 504089564 5.520000e-89 339.0
24 TraesCS3A01G365100 chr7D 86.538 156 20 1 4283 4437 119901953 119901798 2.130000e-38 171.0
25 TraesCS3A01G365100 chr7A 82.822 163 26 2 4283 4444 41923975 41923814 1.290000e-30 145.0
26 TraesCS3A01G365100 chr7A 81.579 152 26 2 4290 4439 519569372 519569523 1.680000e-24 124.0
27 TraesCS3A01G365100 chr4A 81.132 159 29 1 4282 4439 82391430 82391588 4.680000e-25 126.0
28 TraesCS3A01G365100 chr6B 78.481 158 33 1 4283 4439 689095395 689095238 7.890000e-18 102.0
29 TraesCS3A01G365100 chr6B 78.481 158 33 1 4283 4439 689115322 689115165 7.890000e-18 102.0
30 TraesCS3A01G365100 chr5D 77.922 154 31 2 4286 4439 208533369 208533219 4.750000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G365100 chr3A 614537832 614542289 4457 True 8233.0 8233 100.00000 1 4458 1 chr3A.!!$R1 4457
1 TraesCS3A01G365100 chr3D 471772716 471776683 3967 True 1314.0 2828 92.79975 347 4286 4 chr3D.!!$R1 3939
2 TraesCS3A01G365100 chr3B 627210532 627214635 4103 True 1099.8 2769 91.37900 283 4279 5 chr3B.!!$R1 3996

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
163 164 0.033228 TGCAAAGTGGGCCAATTTCG 59.967 50.0 27.50 22.02 29.07 3.46 F
332 333 0.111061 AAATCACTGTGGCCTCTGCA 59.889 50.0 3.32 0.00 40.13 4.41 F
755 780 0.332972 ACCTTGGATTCTTCCTGGGC 59.667 55.0 0.00 0.00 43.07 5.36 F
909 949 0.463833 GTCTGGATTTGGTAGCGGGG 60.464 60.0 0.00 0.00 0.00 5.73 F
910 950 0.619255 TCTGGATTTGGTAGCGGGGA 60.619 55.0 0.00 0.00 0.00 4.81 F
1571 1620 1.186200 GCTCCCCCACTTCCATTTTC 58.814 55.0 0.00 0.00 0.00 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1643 1692 0.437295 CAGTTTTACCGAACTCGCCG 59.563 55.000 0.00 0.0 37.76 6.46 R
2182 2242 0.894184 TTTTTCCGCCAATGCCGGTA 60.894 50.000 1.72 0.0 45.71 4.02 R
2353 2660 0.512952 CTGGAAACTTGAACGAGGCG 59.487 55.000 0.00 0.0 0.00 5.52 R
2498 2805 2.185004 ACAGCTGTTGTATCGCCTTT 57.815 45.000 15.25 0.0 38.56 3.11 R
2549 2856 4.921470 ATCACGTTCCGAAGTTATTGTG 57.079 40.909 0.00 0.0 0.00 3.33 R
3547 3915 1.379044 CACTCCCACCCAGATTGCC 60.379 63.158 0.00 0.0 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 9.885743 GAAATAATTGTGTTGATAATTGAACGC 57.114 29.630 0.00 0.00 33.96 4.84
71 72 9.638239 AAATAATTGTGTTGATAATTGAACGCT 57.362 25.926 0.00 0.00 34.37 5.07
72 73 6.932901 AATTGTGTTGATAATTGAACGCTG 57.067 33.333 0.00 0.00 34.37 5.18
73 74 5.681337 TTGTGTTGATAATTGAACGCTGA 57.319 34.783 0.00 0.00 34.37 4.26
74 75 5.281693 TGTGTTGATAATTGAACGCTGAG 57.718 39.130 0.00 0.00 34.37 3.35
75 76 4.994217 TGTGTTGATAATTGAACGCTGAGA 59.006 37.500 0.00 0.00 34.37 3.27
76 77 5.107104 TGTGTTGATAATTGAACGCTGAGAC 60.107 40.000 0.00 0.00 34.37 3.36
77 78 4.994217 TGTTGATAATTGAACGCTGAGACA 59.006 37.500 0.00 0.00 0.00 3.41
78 79 5.107104 TGTTGATAATTGAACGCTGAGACAC 60.107 40.000 0.00 0.00 0.00 3.67
79 80 3.612423 TGATAATTGAACGCTGAGACACG 59.388 43.478 0.00 0.00 0.00 4.49
80 81 2.148916 AATTGAACGCTGAGACACGA 57.851 45.000 0.00 0.00 0.00 4.35
81 82 1.419374 ATTGAACGCTGAGACACGAC 58.581 50.000 0.00 0.00 0.00 4.34
82 83 0.933047 TTGAACGCTGAGACACGACG 60.933 55.000 0.00 0.00 0.00 5.12
83 84 1.082300 GAACGCTGAGACACGACGA 60.082 57.895 0.00 0.00 0.00 4.20
84 85 0.659417 GAACGCTGAGACACGACGAA 60.659 55.000 0.00 0.00 0.00 3.85
85 86 0.248743 AACGCTGAGACACGACGAAA 60.249 50.000 0.00 0.00 0.00 3.46
86 87 0.933509 ACGCTGAGACACGACGAAAC 60.934 55.000 0.00 0.00 0.00 2.78
87 88 1.606350 CGCTGAGACACGACGAAACC 61.606 60.000 0.00 0.00 0.00 3.27
88 89 0.596600 GCTGAGACACGACGAAACCA 60.597 55.000 0.00 0.00 0.00 3.67
89 90 1.129326 CTGAGACACGACGAAACCAC 58.871 55.000 0.00 0.00 0.00 4.16
90 91 0.593008 TGAGACACGACGAAACCACG 60.593 55.000 0.00 0.00 39.31 4.94
91 92 1.873355 GAGACACGACGAAACCACGC 61.873 60.000 0.00 0.00 36.70 5.34
92 93 2.935446 GACACGACGAAACCACGCC 61.935 63.158 0.00 0.00 36.70 5.68
93 94 4.054455 CACGACGAAACCACGCCG 62.054 66.667 0.00 0.00 43.75 6.46
94 95 4.268939 ACGACGAAACCACGCCGA 62.269 61.111 0.00 0.00 41.08 5.54
95 96 3.031457 CGACGAAACCACGCCGAA 61.031 61.111 0.00 0.00 41.08 4.30
96 97 2.377310 CGACGAAACCACGCCGAAT 61.377 57.895 0.00 0.00 41.08 3.34
97 98 1.072116 CGACGAAACCACGCCGAATA 61.072 55.000 0.00 0.00 41.08 1.75
98 99 1.283736 GACGAAACCACGCCGAATAT 58.716 50.000 0.00 0.00 36.70 1.28
99 100 1.003851 ACGAAACCACGCCGAATATG 58.996 50.000 0.00 0.00 36.70 1.78
100 101 0.303493 CGAAACCACGCCGAATATGG 59.697 55.000 0.00 0.00 39.57 2.74
101 102 0.661020 GAAACCACGCCGAATATGGG 59.339 55.000 0.00 0.00 37.86 4.00
102 103 0.034863 AAACCACGCCGAATATGGGT 60.035 50.000 0.00 0.00 37.86 4.51
103 104 0.463116 AACCACGCCGAATATGGGTC 60.463 55.000 0.00 0.00 37.86 4.46
104 105 1.335132 ACCACGCCGAATATGGGTCT 61.335 55.000 0.00 0.00 37.86 3.85
105 106 0.677288 CCACGCCGAATATGGGTCTA 59.323 55.000 0.00 0.00 0.00 2.59
106 107 1.275291 CCACGCCGAATATGGGTCTAT 59.725 52.381 0.00 0.00 0.00 1.98
107 108 2.289444 CCACGCCGAATATGGGTCTATT 60.289 50.000 0.00 0.00 0.00 1.73
108 109 2.993899 CACGCCGAATATGGGTCTATTC 59.006 50.000 0.00 0.00 35.61 1.75
109 110 2.897969 ACGCCGAATATGGGTCTATTCT 59.102 45.455 0.00 0.00 36.42 2.40
110 111 3.056749 ACGCCGAATATGGGTCTATTCTC 60.057 47.826 0.00 0.00 36.42 2.87
111 112 3.512680 GCCGAATATGGGTCTATTCTCG 58.487 50.000 0.00 0.00 36.42 4.04
112 113 3.512680 CCGAATATGGGTCTATTCTCGC 58.487 50.000 0.00 0.00 36.42 5.03
113 114 3.512680 CGAATATGGGTCTATTCTCGCC 58.487 50.000 0.00 0.00 36.42 5.54
114 115 3.056821 CGAATATGGGTCTATTCTCGCCA 60.057 47.826 0.00 0.00 36.42 5.69
115 116 4.382040 CGAATATGGGTCTATTCTCGCCAT 60.382 45.833 0.00 0.00 36.42 4.40
116 117 5.163550 CGAATATGGGTCTATTCTCGCCATA 60.164 44.000 0.00 0.00 36.42 2.74
117 118 6.461648 CGAATATGGGTCTATTCTCGCCATAT 60.462 42.308 0.00 0.00 36.42 1.78
118 119 3.961480 TGGGTCTATTCTCGCCATATG 57.039 47.619 0.00 0.00 0.00 1.78
119 120 2.567169 TGGGTCTATTCTCGCCATATGG 59.433 50.000 18.07 18.07 38.53 2.74
120 121 2.093447 GGGTCTATTCTCGCCATATGGG 60.093 54.545 23.30 13.13 40.85 4.00
133 134 4.766404 CCATATGGGCCTTTTATTCGTC 57.234 45.455 14.52 0.00 0.00 4.20
134 135 3.188460 CCATATGGGCCTTTTATTCGTCG 59.812 47.826 14.52 0.00 0.00 5.12
135 136 2.702592 ATGGGCCTTTTATTCGTCGA 57.297 45.000 4.53 0.00 0.00 4.20
136 137 2.476126 TGGGCCTTTTATTCGTCGAA 57.524 45.000 10.61 10.61 0.00 3.71
137 138 2.780714 TGGGCCTTTTATTCGTCGAAA 58.219 42.857 12.40 0.00 0.00 3.46
138 139 3.349022 TGGGCCTTTTATTCGTCGAAAT 58.651 40.909 12.40 3.70 0.00 2.17
139 140 3.759618 TGGGCCTTTTATTCGTCGAAATT 59.240 39.130 12.40 0.00 0.00 1.82
140 141 4.102649 GGGCCTTTTATTCGTCGAAATTG 58.897 43.478 12.40 1.41 0.00 2.32
141 142 4.102649 GGCCTTTTATTCGTCGAAATTGG 58.897 43.478 12.40 10.76 0.00 3.16
142 143 4.102649 GCCTTTTATTCGTCGAAATTGGG 58.897 43.478 12.40 11.36 0.00 4.12
143 144 4.102649 CCTTTTATTCGTCGAAATTGGGC 58.897 43.478 12.40 0.00 0.00 5.36
144 145 4.142469 CCTTTTATTCGTCGAAATTGGGCT 60.142 41.667 12.40 0.00 0.00 5.19
145 146 4.349663 TTTATTCGTCGAAATTGGGCTG 57.650 40.909 12.40 0.00 0.00 4.85
146 147 0.451783 ATTCGTCGAAATTGGGCTGC 59.548 50.000 12.40 0.00 0.00 5.25
147 148 0.886938 TTCGTCGAAATTGGGCTGCA 60.887 50.000 4.91 0.00 0.00 4.41
148 149 0.886938 TCGTCGAAATTGGGCTGCAA 60.887 50.000 0.50 0.00 0.00 4.08
149 150 0.039617 CGTCGAAATTGGGCTGCAAA 60.040 50.000 0.50 0.00 0.00 3.68
150 151 1.701704 GTCGAAATTGGGCTGCAAAG 58.298 50.000 0.50 0.00 0.00 2.77
151 152 1.000274 GTCGAAATTGGGCTGCAAAGT 60.000 47.619 0.50 0.00 0.00 2.66
152 153 1.000385 TCGAAATTGGGCTGCAAAGTG 60.000 47.619 0.50 0.00 0.00 3.16
153 154 1.799544 GAAATTGGGCTGCAAAGTGG 58.200 50.000 0.50 0.00 0.00 4.00
154 155 0.397564 AAATTGGGCTGCAAAGTGGG 59.602 50.000 0.50 0.00 0.00 4.61
155 156 2.115734 AATTGGGCTGCAAAGTGGGC 62.116 55.000 0.50 0.00 0.00 5.36
158 159 3.233231 GGCTGCAAAGTGGGCCAA 61.233 61.111 8.40 0.00 43.59 4.52
159 160 2.586293 GGCTGCAAAGTGGGCCAAT 61.586 57.895 8.40 3.05 43.59 3.16
160 161 1.372307 GCTGCAAAGTGGGCCAATT 59.628 52.632 14.45 14.45 0.00 2.32
161 162 0.250424 GCTGCAAAGTGGGCCAATTT 60.250 50.000 25.03 25.03 31.76 1.82
162 163 1.799544 CTGCAAAGTGGGCCAATTTC 58.200 50.000 27.50 21.06 29.07 2.17
163 164 0.033228 TGCAAAGTGGGCCAATTTCG 59.967 50.000 27.50 22.02 29.07 3.46
164 165 0.670239 GCAAAGTGGGCCAATTTCGG 60.670 55.000 27.50 18.68 29.07 4.30
171 172 4.496927 GCCAATTTCGGCGCCTGG 62.497 66.667 26.68 24.98 43.52 4.45
172 173 3.825611 CCAATTTCGGCGCCTGGG 61.826 66.667 26.68 8.93 0.00 4.45
173 174 3.825611 CAATTTCGGCGCCTGGGG 61.826 66.667 26.68 9.07 0.00 4.96
203 204 3.342627 CGACGACTGGGCGCAAAA 61.343 61.111 10.83 0.00 33.86 2.44
204 205 2.251371 GACGACTGGGCGCAAAAC 59.749 61.111 10.83 0.00 33.86 2.43
205 206 3.249973 GACGACTGGGCGCAAAACC 62.250 63.158 10.83 0.47 33.86 3.27
206 207 4.383602 CGACTGGGCGCAAAACCG 62.384 66.667 10.83 2.69 0.00 4.44
207 208 3.284449 GACTGGGCGCAAAACCGT 61.284 61.111 10.83 3.69 0.00 4.83
208 209 3.249973 GACTGGGCGCAAAACCGTC 62.250 63.158 10.83 9.35 0.00 4.79
212 213 2.358984 GGCGCAAAACCGTCCCTA 60.359 61.111 10.83 0.00 0.00 3.53
213 214 2.396157 GGCGCAAAACCGTCCCTAG 61.396 63.158 10.83 0.00 0.00 3.02
214 215 3.035576 GCGCAAAACCGTCCCTAGC 62.036 63.158 0.30 0.00 0.00 3.42
215 216 2.736682 CGCAAAACCGTCCCTAGCG 61.737 63.158 0.00 0.00 37.68 4.26
216 217 3.035576 GCAAAACCGTCCCTAGCGC 62.036 63.158 0.00 0.00 0.00 5.92
217 218 2.046604 AAAACCGTCCCTAGCGCC 60.047 61.111 2.29 0.00 0.00 6.53
218 219 3.945304 AAAACCGTCCCTAGCGCCG 62.945 63.158 2.29 0.00 0.00 6.46
222 223 4.554363 CGTCCCTAGCGCCGAGTG 62.554 72.222 2.29 0.00 0.00 3.51
223 224 3.450115 GTCCCTAGCGCCGAGTGT 61.450 66.667 2.29 0.00 0.00 3.55
224 225 2.117156 GTCCCTAGCGCCGAGTGTA 61.117 63.158 2.29 0.00 0.00 2.90
225 226 1.152819 TCCCTAGCGCCGAGTGTAT 60.153 57.895 2.29 0.00 0.00 2.29
226 227 1.170919 TCCCTAGCGCCGAGTGTATC 61.171 60.000 2.29 0.00 0.00 2.24
234 235 2.353607 CGAGTGTATCGCCGGCTC 60.354 66.667 26.68 12.39 45.98 4.70
235 236 2.353607 GAGTGTATCGCCGGCTCG 60.354 66.667 26.68 10.37 0.00 5.03
245 246 2.510906 CCGGCTCGGGGATGATTT 59.489 61.111 5.79 0.00 44.15 2.17
246 247 1.152963 CCGGCTCGGGGATGATTTT 60.153 57.895 5.79 0.00 44.15 1.82
247 248 0.751643 CCGGCTCGGGGATGATTTTT 60.752 55.000 5.79 0.00 44.15 1.94
248 249 1.476110 CCGGCTCGGGGATGATTTTTA 60.476 52.381 5.79 0.00 44.15 1.52
249 250 2.504367 CGGCTCGGGGATGATTTTTAT 58.496 47.619 0.00 0.00 0.00 1.40
250 251 2.226437 CGGCTCGGGGATGATTTTTATG 59.774 50.000 0.00 0.00 0.00 1.90
251 252 2.029918 GGCTCGGGGATGATTTTTATGC 60.030 50.000 0.00 0.00 0.00 3.14
252 253 2.350772 GCTCGGGGATGATTTTTATGCG 60.351 50.000 0.00 0.00 0.00 4.73
253 254 2.878406 CTCGGGGATGATTTTTATGCGT 59.122 45.455 0.00 0.00 0.00 5.24
254 255 2.875933 TCGGGGATGATTTTTATGCGTC 59.124 45.455 0.00 0.00 0.00 5.19
255 256 2.031157 CGGGGATGATTTTTATGCGTCC 60.031 50.000 0.00 0.00 37.06 4.79
256 257 3.222603 GGGGATGATTTTTATGCGTCCT 58.777 45.455 0.00 0.00 37.74 3.85
257 258 3.004734 GGGGATGATTTTTATGCGTCCTG 59.995 47.826 0.00 0.00 37.74 3.86
258 259 3.004734 GGGATGATTTTTATGCGTCCTGG 59.995 47.826 0.00 0.00 37.74 4.45
259 260 3.004734 GGATGATTTTTATGCGTCCTGGG 59.995 47.826 0.00 0.00 35.36 4.45
260 261 3.358111 TGATTTTTATGCGTCCTGGGA 57.642 42.857 0.00 0.00 0.00 4.37
261 262 3.278574 TGATTTTTATGCGTCCTGGGAG 58.721 45.455 0.00 0.00 0.00 4.30
262 263 2.122783 TTTTTATGCGTCCTGGGAGG 57.877 50.000 5.10 5.10 36.46 4.30
263 264 0.254747 TTTTATGCGTCCTGGGAGGG 59.745 55.000 10.70 0.00 35.59 4.30
264 265 2.265467 TTTATGCGTCCTGGGAGGGC 62.265 60.000 10.70 8.19 36.39 5.19
268 269 4.410400 CGTCCTGGGAGGGCCAAC 62.410 72.222 6.18 0.00 36.37 3.77
269 270 4.410400 GTCCTGGGAGGGCCAACG 62.410 72.222 6.18 0.00 32.63 4.10
291 292 3.494332 GCTGGAGATGCCCTAATCAAAT 58.506 45.455 0.00 0.00 34.97 2.32
298 299 3.370840 TGCCCTAATCAAATGTCTGCT 57.629 42.857 0.00 0.00 0.00 4.24
332 333 0.111061 AAATCACTGTGGCCTCTGCA 59.889 50.000 3.32 0.00 40.13 4.41
336 337 0.524862 CACTGTGGCCTCTGCATTTC 59.475 55.000 3.32 0.00 40.13 2.17
341 342 3.495331 TGTGGCCTCTGCATTTCTTTTA 58.505 40.909 3.32 0.00 40.13 1.52
344 345 4.866486 GTGGCCTCTGCATTTCTTTTATTG 59.134 41.667 3.32 0.00 40.13 1.90
345 346 4.771577 TGGCCTCTGCATTTCTTTTATTGA 59.228 37.500 3.32 0.00 40.13 2.57
346 347 5.105063 GGCCTCTGCATTTCTTTTATTGAC 58.895 41.667 0.00 0.00 40.13 3.18
347 348 5.336690 GGCCTCTGCATTTCTTTTATTGACA 60.337 40.000 0.00 0.00 40.13 3.58
348 349 6.335777 GCCTCTGCATTTCTTTTATTGACAT 58.664 36.000 0.00 0.00 37.47 3.06
349 350 7.416664 GGCCTCTGCATTTCTTTTATTGACATA 60.417 37.037 0.00 0.00 40.13 2.29
388 399 1.000717 ACGCCAGAACCAAAAATTCCG 60.001 47.619 0.00 0.00 0.00 4.30
474 485 3.461982 GTGACGCAGACGCAGACG 61.462 66.667 0.00 0.00 45.53 4.18
581 592 1.720694 CTCCGCCGGAACTCTCTCTC 61.721 65.000 7.50 0.00 0.00 3.20
582 593 1.751162 CCGCCGGAACTCTCTCTCT 60.751 63.158 5.05 0.00 0.00 3.10
659 672 2.357517 GCCTGCGGGTATGGATCG 60.358 66.667 14.55 0.00 34.45 3.69
665 678 2.207229 CGGGTATGGATCGGGAGCA 61.207 63.158 0.00 0.00 0.00 4.26
755 780 0.332972 ACCTTGGATTCTTCCTGGGC 59.667 55.000 0.00 0.00 43.07 5.36
817 842 2.034221 GTGTCCTTGGAGTGGCCC 59.966 66.667 0.00 0.00 34.97 5.80
903 943 3.072330 TGTGCTCTTGTCTGGATTTGGTA 59.928 43.478 0.00 0.00 0.00 3.25
907 947 2.009774 CTTGTCTGGATTTGGTAGCGG 58.990 52.381 0.00 0.00 0.00 5.52
909 949 0.463833 GTCTGGATTTGGTAGCGGGG 60.464 60.000 0.00 0.00 0.00 5.73
910 950 0.619255 TCTGGATTTGGTAGCGGGGA 60.619 55.000 0.00 0.00 0.00 4.81
942 982 4.815269 ACTGATCTCGTCTCCTTTTCTTG 58.185 43.478 0.00 0.00 0.00 3.02
977 1017 7.014038 TCTGTAGGTTTCTACTTCGAGAAAGTT 59.986 37.037 0.00 0.00 46.26 2.66
1065 1105 4.785453 CCTGACTTGGAGCGGGGC 62.785 72.222 0.00 0.00 0.00 5.80
1551 1600 2.689983 CAACAAGTAAGCCCATCCATCC 59.310 50.000 0.00 0.00 0.00 3.51
1571 1620 1.186200 GCTCCCCCACTTCCATTTTC 58.814 55.000 0.00 0.00 0.00 2.29
1612 1661 1.802960 CCATGAGCTGTCAGTGTTCAC 59.197 52.381 0.93 0.00 35.66 3.18
1726 1775 4.098349 TGCAAAAGATAACATCTGGATGCC 59.902 41.667 10.13 0.00 42.39 4.40
1765 1814 4.002906 TCTTTAGCAGGAACACGATTGT 57.997 40.909 0.00 0.00 37.67 2.71
1849 1898 5.238868 TGAGTATGATCGAACAGTAGGCTAC 59.761 44.000 16.93 16.93 0.00 3.58
1916 1965 2.359478 TTCCGGCCGCCTTTTCTC 60.359 61.111 22.85 0.00 0.00 2.87
1996 2046 6.616774 TTGATTTTTGTGGAAATGCCTTTC 57.383 33.333 5.95 5.95 40.09 2.62
2045 2095 2.543777 TTGTGTCACCTTCCACTAGC 57.456 50.000 0.00 0.00 32.76 3.42
2046 2096 1.717032 TGTGTCACCTTCCACTAGCT 58.283 50.000 0.00 0.00 32.76 3.32
2047 2097 2.884320 TGTGTCACCTTCCACTAGCTA 58.116 47.619 0.00 0.00 32.76 3.32
2048 2098 2.826128 TGTGTCACCTTCCACTAGCTAG 59.174 50.000 19.44 19.44 32.76 3.42
2182 2242 6.670695 AAGGTTTTGCTTATCCATGAGTTT 57.329 33.333 0.00 0.00 0.00 2.66
2183 2243 7.775053 AAGGTTTTGCTTATCCATGAGTTTA 57.225 32.000 0.00 0.00 0.00 2.01
2184 2244 7.158099 AGGTTTTGCTTATCCATGAGTTTAC 57.842 36.000 0.00 0.00 0.00 2.01
2185 2245 6.152831 AGGTTTTGCTTATCCATGAGTTTACC 59.847 38.462 0.00 0.00 0.00 2.85
2187 2247 3.804036 TGCTTATCCATGAGTTTACCGG 58.196 45.455 0.00 0.00 0.00 5.28
2193 2253 1.405105 CCATGAGTTTACCGGCATTGG 59.595 52.381 0.00 0.00 0.00 3.16
2204 2264 2.826277 GGCATTGGCGGAAAAAGTG 58.174 52.632 0.00 0.00 42.47 3.16
2215 2275 4.051237 GCGGAAAAAGTGAAGCAGAATTT 58.949 39.130 0.00 0.00 0.00 1.82
2325 2507 4.778154 GCGCGAAAGTTATAAGCAGTACAC 60.778 45.833 12.10 0.00 0.00 2.90
2353 2660 5.066593 AGCAGGAATAGTTATTTAGCAGCC 58.933 41.667 0.00 0.00 0.00 4.85
2369 2676 1.206831 GCCGCCTCGTTCAAGTTTC 59.793 57.895 0.00 0.00 0.00 2.78
2390 2697 2.689983 CCAGAATTAAGCATGGTCCACC 59.310 50.000 0.00 0.00 0.00 4.61
2403 2710 1.545651 GGTCCACCCTGTTTTCTGAGG 60.546 57.143 0.00 0.00 0.00 3.86
2473 2780 6.211184 TGCAGGAATTCTATTTGACAATGGTT 59.789 34.615 5.23 0.00 0.00 3.67
2498 2805 9.581289 TTGTAAAAATGAAGTGGGAAGAAGATA 57.419 29.630 0.00 0.00 0.00 1.98
2549 2856 4.019321 TGGGGCTACATATTCTAATCTGCC 60.019 45.833 0.00 0.00 37.34 4.85
2700 3015 7.041508 GGATATGCAACCTATTTTCTGTCTGAG 60.042 40.741 0.00 0.00 0.00 3.35
2743 3058 3.513515 GCTATTCTAGTGAGGGCTATGCT 59.486 47.826 0.00 0.00 0.00 3.79
3069 3423 1.135373 CACTGCCTACTGTACTGTCCG 60.135 57.143 8.85 2.11 0.00 4.79
3074 3428 0.815734 CTACTGTACTGTCCGGTGGG 59.184 60.000 8.85 0.00 0.00 4.61
3130 3497 4.156739 CCTCTGAAGGGACATTAGCAAAAC 59.843 45.833 0.00 0.00 39.21 2.43
3156 3523 8.114331 TGCATTTCATCATTTTACTCTTGAGT 57.886 30.769 8.41 8.41 0.00 3.41
3224 3592 5.712152 ATTGAAACATGTCCCTGTCTTTC 57.288 39.130 0.00 0.00 0.00 2.62
3277 3645 2.734346 GCATGCAACGTGGTTGGC 60.734 61.111 14.21 2.26 42.99 4.52
3316 3684 0.389817 TGGAGCAGTGGAACGAATCG 60.390 55.000 0.00 0.00 45.86 3.34
3334 3702 3.188786 GGCAACTCCGCAGCTACG 61.189 66.667 0.00 0.00 0.00 3.51
3337 3705 2.125912 AACTCCGCAGCTACGCAG 60.126 61.111 0.00 0.00 0.00 5.18
3467 3835 3.518998 CCGGATGAGCCTCGTCGT 61.519 66.667 7.81 0.00 33.29 4.34
3511 3879 2.163818 TCAAAGACGTTGCTACTGGG 57.836 50.000 0.00 0.00 37.13 4.45
3517 3885 3.335579 AGACGTTGCTACTGGGAAAATC 58.664 45.455 0.00 0.00 0.00 2.17
3524 3892 2.629051 CTACTGGGAAAATCGTGGGTC 58.371 52.381 0.00 0.00 0.00 4.46
3530 3898 1.504359 GAAAATCGTGGGTCGTGTCA 58.496 50.000 0.00 0.00 40.80 3.58
3547 3915 4.793216 CGTGTCAGGTCAAAAACTTGAAAG 59.207 41.667 0.00 0.00 44.63 2.62
3583 3951 3.672295 GAGCCGAAGAGCTGGGTGG 62.672 68.421 0.00 0.00 45.15 4.61
3676 4044 1.684049 AGCAGAGACGGAAGAGGGG 60.684 63.158 0.00 0.00 0.00 4.79
3677 4045 2.896443 CAGAGACGGAAGAGGGGC 59.104 66.667 0.00 0.00 0.00 5.80
3680 4048 0.836400 AGAGACGGAAGAGGGGCAAA 60.836 55.000 0.00 0.00 0.00 3.68
3683 4051 1.075536 AGACGGAAGAGGGGCAAATTT 59.924 47.619 0.00 0.00 0.00 1.82
3684 4052 2.307686 AGACGGAAGAGGGGCAAATTTA 59.692 45.455 0.00 0.00 0.00 1.40
3686 4054 3.023832 ACGGAAGAGGGGCAAATTTATG 58.976 45.455 0.00 0.00 0.00 1.90
3701 4069 0.397816 TTATGGGGAAAATGGGGGCG 60.398 55.000 0.00 0.00 0.00 6.13
3718 4086 2.406401 GTGGTGCGCATCATGCTC 59.594 61.111 28.54 10.22 42.25 4.26
3729 4097 2.221286 GCATCATGCTCTGTGATTCTCG 59.779 50.000 1.02 0.00 40.96 4.04
3790 4158 2.396157 GGTCCGGCGTTGATGTTCC 61.396 63.158 6.01 0.00 0.00 3.62
3813 4182 2.808543 GTCAGATGTTCTCCGTTTGCTT 59.191 45.455 0.00 0.00 0.00 3.91
3835 4204 6.385649 TTCCGTTATTTTCTTCTTGCAACT 57.614 33.333 0.00 0.00 0.00 3.16
3896 4267 0.600557 AACCTCTGTCAGCGACTCAG 59.399 55.000 9.49 3.34 33.15 3.35
3898 4269 1.102154 CCTCTGTCAGCGACTCAGAT 58.898 55.000 9.49 0.00 37.54 2.90
3921 4292 4.555348 GGAACCAAATGTGTGTCGTAAA 57.445 40.909 0.00 0.00 0.00 2.01
3922 4293 5.116069 GGAACCAAATGTGTGTCGTAAAT 57.884 39.130 0.00 0.00 0.00 1.40
3923 4294 4.915085 GGAACCAAATGTGTGTCGTAAATG 59.085 41.667 0.00 0.00 0.00 2.32
3924 4295 4.497473 ACCAAATGTGTGTCGTAAATGG 57.503 40.909 0.00 0.00 0.00 3.16
3927 4298 4.915085 CCAAATGTGTGTCGTAAATGGTTC 59.085 41.667 0.00 0.00 0.00 3.62
3928 4299 4.759516 AATGTGTGTCGTAAATGGTTCC 57.240 40.909 0.00 0.00 0.00 3.62
3930 4301 3.811083 TGTGTGTCGTAAATGGTTCCTT 58.189 40.909 0.00 0.00 0.00 3.36
3932 4303 4.062991 GTGTGTCGTAAATGGTTCCTTCT 58.937 43.478 0.00 0.00 0.00 2.85
3934 4305 3.435671 GTGTCGTAAATGGTTCCTTCTGG 59.564 47.826 0.00 0.00 0.00 3.86
3935 4306 3.007635 GTCGTAAATGGTTCCTTCTGGG 58.992 50.000 0.00 0.00 0.00 4.45
3936 4307 2.907696 TCGTAAATGGTTCCTTCTGGGA 59.092 45.455 0.00 0.00 43.41 4.37
3937 4308 3.521937 TCGTAAATGGTTCCTTCTGGGAT 59.478 43.478 0.00 0.00 44.66 3.85
3938 4309 3.877508 CGTAAATGGTTCCTTCTGGGATC 59.122 47.826 0.00 0.00 44.66 3.36
3942 4313 0.548510 GGTTCCTTCTGGGATCCTGG 59.451 60.000 12.58 4.94 45.88 4.45
3943 4314 0.106967 GTTCCTTCTGGGATCCTGGC 60.107 60.000 12.58 0.00 44.66 4.85
3944 4315 0.253347 TTCCTTCTGGGATCCTGGCT 60.253 55.000 12.58 0.00 44.66 4.75
3945 4316 0.692419 TCCTTCTGGGATCCTGGCTC 60.692 60.000 12.58 0.00 39.58 4.70
3946 4317 1.445095 CTTCTGGGATCCTGGCTCG 59.555 63.158 12.58 0.00 0.00 5.03
3947 4318 1.306141 TTCTGGGATCCTGGCTCGT 60.306 57.895 12.58 0.00 0.00 4.18
3948 4319 1.617018 TTCTGGGATCCTGGCTCGTG 61.617 60.000 12.58 0.00 0.00 4.35
3949 4320 2.038813 TGGGATCCTGGCTCGTGA 59.961 61.111 12.58 0.00 0.00 4.35
3950 4321 1.612146 TGGGATCCTGGCTCGTGAA 60.612 57.895 12.58 0.00 0.00 3.18
3951 4322 1.153349 GGGATCCTGGCTCGTGAAC 60.153 63.158 12.58 0.00 0.00 3.18
3952 4323 1.519455 GGATCCTGGCTCGTGAACG 60.519 63.158 3.84 0.00 41.45 3.95
3954 4325 0.802607 GATCCTGGCTCGTGAACGAC 60.803 60.000 0.50 0.00 44.22 4.34
3955 4326 1.251527 ATCCTGGCTCGTGAACGACT 61.252 55.000 0.50 0.00 44.22 4.18
3956 4327 0.607217 TCCTGGCTCGTGAACGACTA 60.607 55.000 0.50 0.00 44.22 2.59
3957 4328 0.179161 CCTGGCTCGTGAACGACTAG 60.179 60.000 0.50 6.63 44.22 2.57
3958 4329 0.179161 CTGGCTCGTGAACGACTAGG 60.179 60.000 0.50 0.00 44.22 3.02
3959 4330 1.139095 GGCTCGTGAACGACTAGGG 59.861 63.158 0.50 0.00 44.22 3.53
3960 4331 1.310933 GGCTCGTGAACGACTAGGGA 61.311 60.000 0.50 0.00 44.22 4.20
3961 4332 0.524862 GCTCGTGAACGACTAGGGAA 59.475 55.000 0.50 0.00 44.22 3.97
3962 4333 1.467713 GCTCGTGAACGACTAGGGAAG 60.468 57.143 0.50 0.00 44.22 3.46
3963 4334 1.811359 CTCGTGAACGACTAGGGAAGT 59.189 52.381 0.50 0.00 44.22 3.01
3974 4345 3.256704 ACTAGGGAAGTCAAATGACCCA 58.743 45.455 9.84 0.00 45.85 4.51
3975 4346 3.655777 ACTAGGGAAGTCAAATGACCCAA 59.344 43.478 9.84 0.00 45.85 4.12
3976 4347 2.876581 AGGGAAGTCAAATGACCCAAC 58.123 47.619 9.84 0.00 45.85 3.77
3977 4348 1.539827 GGGAAGTCAAATGACCCAACG 59.460 52.381 9.84 0.00 45.85 4.10
3989 4360 3.661944 TGACCCAACGTTTATTAGCGAA 58.338 40.909 0.00 0.00 0.00 4.70
3990 4361 4.255301 TGACCCAACGTTTATTAGCGAAT 58.745 39.130 0.00 0.00 0.00 3.34
3991 4362 4.330620 TGACCCAACGTTTATTAGCGAATC 59.669 41.667 0.00 0.00 0.00 2.52
4018 4389 0.253044 CCCGGCTGAGAGATTTTCCA 59.747 55.000 0.00 0.00 0.00 3.53
4028 4399 6.858478 GCTGAGAGATTTTCCAGTGTAAAAAC 59.142 38.462 0.00 0.00 30.20 2.43
4029 4400 7.255277 GCTGAGAGATTTTCCAGTGTAAAAACT 60.255 37.037 3.79 3.79 33.31 2.66
4030 4401 7.930217 TGAGAGATTTTCCAGTGTAAAAACTG 58.070 34.615 8.17 0.00 45.93 3.16
4040 4411 6.155475 CAGTGTAAAAACTGGGGAAAATGA 57.845 37.500 0.00 0.00 43.22 2.57
4041 4412 5.983118 CAGTGTAAAAACTGGGGAAAATGAC 59.017 40.000 0.00 0.00 43.22 3.06
4042 4413 5.069914 AGTGTAAAAACTGGGGAAAATGACC 59.930 40.000 0.00 0.00 0.00 4.02
4061 4435 3.500343 ACCCAACGTACTAGTAAGGTGT 58.500 45.455 25.74 11.00 31.69 4.16
4068 4442 3.243002 CGTACTAGTAAGGTGTAGCCAGC 60.243 52.174 3.61 0.00 40.61 4.85
4069 4443 2.816411 ACTAGTAAGGTGTAGCCAGCA 58.184 47.619 0.00 0.00 41.60 4.41
4183 4579 4.916293 GCCGAGGATGCCATGCGA 62.916 66.667 0.00 0.00 0.00 5.10
4184 4580 2.031616 CCGAGGATGCCATGCGAT 59.968 61.111 0.00 0.00 0.00 4.58
4185 4581 2.322830 CCGAGGATGCCATGCGATG 61.323 63.158 0.00 0.00 0.00 3.84
4186 4582 2.952245 GAGGATGCCATGCGATGC 59.048 61.111 0.00 0.00 0.00 3.91
4187 4583 2.596631 AGGATGCCATGCGATGCC 60.597 61.111 0.00 0.00 0.00 4.40
4188 4584 2.908428 GGATGCCATGCGATGCCA 60.908 61.111 0.00 0.00 0.00 4.92
4189 4585 2.273179 GGATGCCATGCGATGCCAT 61.273 57.895 0.00 0.00 0.00 4.40
4190 4586 1.211969 GATGCCATGCGATGCCATC 59.788 57.895 0.00 0.00 0.00 3.51
4191 4587 1.520600 GATGCCATGCGATGCCATCA 61.521 55.000 5.40 0.00 0.00 3.07
4192 4588 0.898326 ATGCCATGCGATGCCATCAT 60.898 50.000 5.40 0.00 35.17 2.45
4193 4589 1.211969 GCCATGCGATGCCATCATC 59.788 57.895 5.40 0.00 44.34 2.92
4203 4599 2.910360 CCATCATCGGCTGGGTCA 59.090 61.111 0.00 0.00 0.00 4.02
4204 4600 1.227764 CCATCATCGGCTGGGTCAG 60.228 63.158 0.00 0.00 34.12 3.51
4279 4676 3.181367 GCATGAGCCTTCACCGTG 58.819 61.111 0.00 0.00 35.83 4.94
4282 4679 2.971598 ATGAGCCTTCACCGTGGGG 61.972 63.158 0.00 3.14 35.83 4.96
4286 4683 4.278513 CCTTCACCGTGGGGGCAA 62.279 66.667 0.00 0.00 40.62 4.52
4287 4684 2.203422 CTTCACCGTGGGGGCAAA 60.203 61.111 0.00 0.00 40.62 3.68
4288 4685 1.830408 CTTCACCGTGGGGGCAAAA 60.830 57.895 0.00 0.00 40.62 2.44
4289 4686 1.152440 TTCACCGTGGGGGCAAAAT 60.152 52.632 0.00 0.00 40.62 1.82
4290 4687 0.760945 TTCACCGTGGGGGCAAAATT 60.761 50.000 0.00 0.00 40.62 1.82
4291 4688 0.760945 TCACCGTGGGGGCAAAATTT 60.761 50.000 0.00 0.00 40.62 1.82
4292 4689 0.107643 CACCGTGGGGGCAAAATTTT 59.892 50.000 0.00 0.00 40.62 1.82
4293 4690 0.107643 ACCGTGGGGGCAAAATTTTG 59.892 50.000 23.74 23.74 40.62 2.44
4294 4691 0.107643 CCGTGGGGGCAAAATTTTGT 59.892 50.000 27.13 0.00 40.24 2.83
4295 4692 1.224965 CGTGGGGGCAAAATTTTGTG 58.775 50.000 27.13 8.90 40.24 3.33
4296 4693 1.474143 CGTGGGGGCAAAATTTTGTGT 60.474 47.619 27.13 0.00 40.24 3.72
4297 4694 2.649190 GTGGGGGCAAAATTTTGTGTT 58.351 42.857 27.13 0.00 40.24 3.32
4298 4695 3.020274 GTGGGGGCAAAATTTTGTGTTT 58.980 40.909 27.13 0.00 40.24 2.83
4299 4696 3.445450 GTGGGGGCAAAATTTTGTGTTTT 59.555 39.130 27.13 0.00 40.24 2.43
4300 4697 3.445096 TGGGGGCAAAATTTTGTGTTTTG 59.555 39.130 27.13 6.89 45.01 2.44
4301 4698 3.696548 GGGGGCAAAATTTTGTGTTTTGA 59.303 39.130 27.13 0.00 45.02 2.69
4302 4699 4.202000 GGGGGCAAAATTTTGTGTTTTGAG 60.202 41.667 27.13 4.13 45.02 3.02
4303 4700 4.350346 GGGCAAAATTTTGTGTTTTGAGC 58.650 39.130 27.13 12.68 45.02 4.26
4304 4701 4.350346 GGCAAAATTTTGTGTTTTGAGCC 58.650 39.130 27.13 17.09 45.02 4.70
4305 4702 4.096231 GGCAAAATTTTGTGTTTTGAGCCT 59.904 37.500 27.13 0.00 45.02 4.58
4306 4703 5.392919 GGCAAAATTTTGTGTTTTGAGCCTT 60.393 36.000 27.13 0.00 45.02 4.35
4307 4704 6.092092 GCAAAATTTTGTGTTTTGAGCCTTT 58.908 32.000 27.13 0.00 45.02 3.11
4308 4705 6.585702 GCAAAATTTTGTGTTTTGAGCCTTTT 59.414 30.769 27.13 0.00 45.02 2.27
4309 4706 7.116090 GCAAAATTTTGTGTTTTGAGCCTTTTT 59.884 29.630 27.13 0.00 45.02 1.94
4365 4762 4.891992 TTTTTCGAGATCTGACCCTTCT 57.108 40.909 0.00 0.00 0.00 2.85
4366 4763 5.995565 TTTTTCGAGATCTGACCCTTCTA 57.004 39.130 0.00 0.00 0.00 2.10
4367 4764 4.985538 TTTCGAGATCTGACCCTTCTAC 57.014 45.455 0.00 0.00 0.00 2.59
4368 4765 3.935818 TCGAGATCTGACCCTTCTACT 57.064 47.619 0.00 0.00 0.00 2.57
4369 4766 5.369409 TTCGAGATCTGACCCTTCTACTA 57.631 43.478 0.00 0.00 0.00 1.82
4370 4767 5.570205 TCGAGATCTGACCCTTCTACTAT 57.430 43.478 0.00 0.00 0.00 2.12
4371 4768 5.942961 TCGAGATCTGACCCTTCTACTATT 58.057 41.667 0.00 0.00 0.00 1.73
4372 4769 5.765677 TCGAGATCTGACCCTTCTACTATTG 59.234 44.000 0.00 0.00 0.00 1.90
4373 4770 5.533154 CGAGATCTGACCCTTCTACTATTGT 59.467 44.000 0.00 0.00 0.00 2.71
4374 4771 6.293735 CGAGATCTGACCCTTCTACTATTGTC 60.294 46.154 0.00 0.00 0.00 3.18
4375 4772 5.533154 AGATCTGACCCTTCTACTATTGTCG 59.467 44.000 0.00 0.00 0.00 4.35
4376 4773 3.952323 TCTGACCCTTCTACTATTGTCGG 59.048 47.826 0.00 0.00 0.00 4.79
4377 4774 3.028850 TGACCCTTCTACTATTGTCGGG 58.971 50.000 0.00 0.00 36.30 5.14
4378 4775 2.364647 GACCCTTCTACTATTGTCGGGG 59.635 54.545 0.00 0.00 38.59 5.73
4379 4776 2.292719 ACCCTTCTACTATTGTCGGGGT 60.293 50.000 0.00 0.00 40.67 4.95
4380 4777 2.364647 CCCTTCTACTATTGTCGGGGTC 59.635 54.545 0.00 0.00 0.00 4.46
4381 4778 2.364647 CCTTCTACTATTGTCGGGGTCC 59.635 54.545 0.00 0.00 0.00 4.46
4382 4779 2.832643 TCTACTATTGTCGGGGTCCA 57.167 50.000 0.00 0.00 0.00 4.02
4383 4780 3.323774 TCTACTATTGTCGGGGTCCAT 57.676 47.619 0.00 0.00 0.00 3.41
4384 4781 2.963101 TCTACTATTGTCGGGGTCCATG 59.037 50.000 0.00 0.00 0.00 3.66
4385 4782 0.837272 ACTATTGTCGGGGTCCATGG 59.163 55.000 4.97 4.97 0.00 3.66
4386 4783 0.837272 CTATTGTCGGGGTCCATGGT 59.163 55.000 12.58 0.00 0.00 3.55
4387 4784 0.544223 TATTGTCGGGGTCCATGGTG 59.456 55.000 12.58 0.00 0.00 4.17
4388 4785 2.210144 ATTGTCGGGGTCCATGGTGG 62.210 60.000 12.58 0.00 39.43 4.61
4389 4786 3.327404 GTCGGGGTCCATGGTGGT 61.327 66.667 12.58 0.00 39.03 4.16
4390 4787 1.991167 GTCGGGGTCCATGGTGGTA 60.991 63.158 12.58 0.00 39.03 3.25
4391 4788 1.687840 TCGGGGTCCATGGTGGTAG 60.688 63.158 12.58 2.34 39.03 3.18
4392 4789 2.742116 CGGGGTCCATGGTGGTAGG 61.742 68.421 12.58 0.00 39.03 3.18
4393 4790 2.383601 GGGGTCCATGGTGGTAGGG 61.384 68.421 12.58 0.00 39.03 3.53
4394 4791 1.618447 GGGTCCATGGTGGTAGGGT 60.618 63.158 12.58 0.00 39.03 4.34
4395 4792 1.607612 GGTCCATGGTGGTAGGGTG 59.392 63.158 12.58 0.00 39.03 4.61
4396 4793 1.205460 GGTCCATGGTGGTAGGGTGT 61.205 60.000 12.58 0.00 39.03 4.16
4397 4794 1.575419 GTCCATGGTGGTAGGGTGTA 58.425 55.000 12.58 0.00 39.03 2.90
4398 4795 1.910671 GTCCATGGTGGTAGGGTGTAA 59.089 52.381 12.58 0.00 39.03 2.41
4399 4796 1.910671 TCCATGGTGGTAGGGTGTAAC 59.089 52.381 12.58 0.00 39.03 2.50
4400 4797 1.631388 CCATGGTGGTAGGGTGTAACA 59.369 52.381 2.57 0.00 32.53 2.41
4401 4798 2.355716 CCATGGTGGTAGGGTGTAACAG 60.356 54.545 2.57 0.00 32.53 3.16
4402 4799 0.688487 TGGTGGTAGGGTGTAACAGC 59.312 55.000 0.00 0.00 39.98 4.40
4410 4807 2.987752 GGTGTAACAGCCTATCGCC 58.012 57.895 0.00 0.00 39.98 5.54
4411 4808 0.177141 GGTGTAACAGCCTATCGCCA 59.823 55.000 0.00 0.00 39.98 5.69
4412 4809 1.571919 GTGTAACAGCCTATCGCCAG 58.428 55.000 0.00 0.00 38.78 4.85
4413 4810 0.464036 TGTAACAGCCTATCGCCAGG 59.536 55.000 0.00 0.00 38.78 4.45
4414 4811 0.249911 GTAACAGCCTATCGCCAGGG 60.250 60.000 4.54 0.00 38.78 4.45
4415 4812 0.397957 TAACAGCCTATCGCCAGGGA 60.398 55.000 4.54 0.00 38.78 4.20
4416 4813 1.972660 AACAGCCTATCGCCAGGGAC 61.973 60.000 4.54 0.00 38.78 4.46
4417 4814 2.136878 CAGCCTATCGCCAGGGACT 61.137 63.158 4.54 0.00 38.78 3.85
4418 4815 1.383248 AGCCTATCGCCAGGGACTT 60.383 57.895 4.54 0.00 38.78 3.01
4419 4816 0.983378 AGCCTATCGCCAGGGACTTT 60.983 55.000 4.54 0.00 38.78 2.66
4420 4817 0.815615 GCCTATCGCCAGGGACTTTG 60.816 60.000 4.54 0.00 34.60 2.77
4421 4818 0.830648 CCTATCGCCAGGGACTTTGA 59.169 55.000 0.00 0.00 34.60 2.69
4422 4819 1.473434 CCTATCGCCAGGGACTTTGAC 60.473 57.143 0.00 0.00 34.60 3.18
4423 4820 0.174845 TATCGCCAGGGACTTTGACG 59.825 55.000 0.00 0.00 34.60 4.35
4424 4821 1.541310 ATCGCCAGGGACTTTGACGA 61.541 55.000 0.00 0.00 34.60 4.20
4425 4822 1.079127 CGCCAGGGACTTTGACGAT 60.079 57.895 0.00 0.00 34.60 3.73
4426 4823 0.174845 CGCCAGGGACTTTGACGATA 59.825 55.000 0.00 0.00 34.60 2.92
4427 4824 1.802880 CGCCAGGGACTTTGACGATAG 60.803 57.143 0.00 0.00 34.60 2.08
4428 4825 1.480954 GCCAGGGACTTTGACGATAGA 59.519 52.381 0.00 0.00 34.60 1.98
4429 4826 2.093658 GCCAGGGACTTTGACGATAGAA 60.094 50.000 0.00 0.00 34.60 2.10
4430 4827 3.618997 GCCAGGGACTTTGACGATAGAAA 60.619 47.826 0.00 0.00 34.60 2.52
4431 4828 4.575885 CCAGGGACTTTGACGATAGAAAA 58.424 43.478 0.00 0.00 34.60 2.29
4432 4829 4.392138 CCAGGGACTTTGACGATAGAAAAC 59.608 45.833 0.00 0.00 34.60 2.43
4433 4830 4.994852 CAGGGACTTTGACGATAGAAAACA 59.005 41.667 0.00 0.00 34.60 2.83
4434 4831 5.643777 CAGGGACTTTGACGATAGAAAACAT 59.356 40.000 0.00 0.00 34.60 2.71
4435 4832 5.875359 AGGGACTTTGACGATAGAAAACATC 59.125 40.000 0.00 0.00 34.82 3.06
4436 4833 5.064834 GGGACTTTGACGATAGAAAACATCC 59.935 44.000 0.00 0.00 41.38 3.51
4437 4834 5.064834 GGACTTTGACGATAGAAAACATCCC 59.935 44.000 0.00 0.00 41.38 3.85
4438 4835 5.805728 ACTTTGACGATAGAAAACATCCCT 58.194 37.500 0.00 0.00 41.38 4.20
4439 4836 6.238648 ACTTTGACGATAGAAAACATCCCTT 58.761 36.000 0.00 0.00 41.38 3.95
4440 4837 6.715264 ACTTTGACGATAGAAAACATCCCTTT 59.285 34.615 0.00 0.00 41.38 3.11
4441 4838 6.737254 TTGACGATAGAAAACATCCCTTTC 57.263 37.500 0.00 0.00 41.38 2.62
4442 4839 4.868171 TGACGATAGAAAACATCCCTTTCG 59.132 41.667 0.00 0.00 37.76 3.46
4443 4840 3.621715 ACGATAGAAAACATCCCTTTCGC 59.378 43.478 0.00 0.00 37.76 4.70
4444 4841 3.302480 CGATAGAAAACATCCCTTTCGCG 60.302 47.826 0.00 0.00 37.76 5.87
4445 4842 2.178912 AGAAAACATCCCTTTCGCGA 57.821 45.000 3.71 3.71 37.76 5.87
4446 4843 2.076863 AGAAAACATCCCTTTCGCGAG 58.923 47.619 9.59 0.00 37.76 5.03
4447 4844 1.804748 GAAAACATCCCTTTCGCGAGT 59.195 47.619 9.59 0.00 0.00 4.18
4448 4845 1.156736 AAACATCCCTTTCGCGAGTG 58.843 50.000 9.59 6.16 0.00 3.51
4449 4846 0.320374 AACATCCCTTTCGCGAGTGA 59.680 50.000 9.59 5.13 0.00 3.41
4450 4847 0.389948 ACATCCCTTTCGCGAGTGAC 60.390 55.000 9.59 0.00 0.00 3.67
4451 4848 1.153823 ATCCCTTTCGCGAGTGACG 60.154 57.895 9.59 0.00 45.66 4.35
4452 4849 1.592400 ATCCCTTTCGCGAGTGACGA 61.592 55.000 9.59 3.08 45.77 4.20
4453 4850 1.372499 CCCTTTCGCGAGTGACGAA 60.372 57.895 9.59 0.00 46.91 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.885743 GCGTTCAATTATCAACACAATTATTTC 57.114 29.630 0.00 0.00 0.00 2.17
45 46 9.638239 AGCGTTCAATTATCAACACAATTATTT 57.362 25.926 0.00 0.00 0.00 1.40
46 47 9.075519 CAGCGTTCAATTATCAACACAATTATT 57.924 29.630 0.00 0.00 0.00 1.40
47 48 8.458052 TCAGCGTTCAATTATCAACACAATTAT 58.542 29.630 0.00 0.00 0.00 1.28
48 49 7.811653 TCAGCGTTCAATTATCAACACAATTA 58.188 30.769 0.00 0.00 0.00 1.40
49 50 6.676950 TCAGCGTTCAATTATCAACACAATT 58.323 32.000 0.00 0.00 0.00 2.32
50 51 6.149308 TCTCAGCGTTCAATTATCAACACAAT 59.851 34.615 0.00 0.00 0.00 2.71
51 52 5.468409 TCTCAGCGTTCAATTATCAACACAA 59.532 36.000 0.00 0.00 0.00 3.33
52 53 4.994217 TCTCAGCGTTCAATTATCAACACA 59.006 37.500 0.00 0.00 0.00 3.72
53 54 5.107104 TGTCTCAGCGTTCAATTATCAACAC 60.107 40.000 0.00 0.00 0.00 3.32
54 55 4.994217 TGTCTCAGCGTTCAATTATCAACA 59.006 37.500 0.00 0.00 0.00 3.33
55 56 5.316770 GTGTCTCAGCGTTCAATTATCAAC 58.683 41.667 0.00 0.00 0.00 3.18
56 57 4.091365 CGTGTCTCAGCGTTCAATTATCAA 59.909 41.667 0.00 0.00 0.00 2.57
57 58 3.612423 CGTGTCTCAGCGTTCAATTATCA 59.388 43.478 0.00 0.00 0.00 2.15
58 59 3.857665 TCGTGTCTCAGCGTTCAATTATC 59.142 43.478 0.00 0.00 0.00 1.75
59 60 3.612860 GTCGTGTCTCAGCGTTCAATTAT 59.387 43.478 0.00 0.00 0.00 1.28
60 61 2.984471 GTCGTGTCTCAGCGTTCAATTA 59.016 45.455 0.00 0.00 0.00 1.40
61 62 1.792949 GTCGTGTCTCAGCGTTCAATT 59.207 47.619 0.00 0.00 0.00 2.32
62 63 1.419374 GTCGTGTCTCAGCGTTCAAT 58.581 50.000 0.00 0.00 0.00 2.57
63 64 0.933047 CGTCGTGTCTCAGCGTTCAA 60.933 55.000 0.00 0.00 0.00 2.69
64 65 1.370051 CGTCGTGTCTCAGCGTTCA 60.370 57.895 0.00 0.00 0.00 3.18
65 66 0.659417 TTCGTCGTGTCTCAGCGTTC 60.659 55.000 0.00 0.00 0.00 3.95
66 67 0.248743 TTTCGTCGTGTCTCAGCGTT 60.249 50.000 0.00 0.00 0.00 4.84
67 68 0.933509 GTTTCGTCGTGTCTCAGCGT 60.934 55.000 0.00 0.00 0.00 5.07
68 69 1.606350 GGTTTCGTCGTGTCTCAGCG 61.606 60.000 0.00 0.00 0.00 5.18
69 70 0.596600 TGGTTTCGTCGTGTCTCAGC 60.597 55.000 0.00 0.00 0.00 4.26
70 71 1.129326 GTGGTTTCGTCGTGTCTCAG 58.871 55.000 0.00 0.00 0.00 3.35
71 72 0.593008 CGTGGTTTCGTCGTGTCTCA 60.593 55.000 0.00 0.00 0.00 3.27
72 73 1.873355 GCGTGGTTTCGTCGTGTCTC 61.873 60.000 0.00 0.00 0.00 3.36
73 74 1.947642 GCGTGGTTTCGTCGTGTCT 60.948 57.895 0.00 0.00 0.00 3.41
74 75 2.542896 GCGTGGTTTCGTCGTGTC 59.457 61.111 0.00 0.00 0.00 3.67
75 76 2.963320 GGCGTGGTTTCGTCGTGT 60.963 61.111 0.00 0.00 0.00 4.49
79 80 1.005347 CATATTCGGCGTGGTTTCGTC 60.005 52.381 6.85 0.00 0.00 4.20
80 81 1.003851 CATATTCGGCGTGGTTTCGT 58.996 50.000 6.85 0.00 0.00 3.85
81 82 0.303493 CCATATTCGGCGTGGTTTCG 59.697 55.000 6.85 0.00 0.00 3.46
82 83 0.661020 CCCATATTCGGCGTGGTTTC 59.339 55.000 6.85 0.00 0.00 2.78
83 84 0.034863 ACCCATATTCGGCGTGGTTT 60.035 50.000 6.85 0.00 0.00 3.27
84 85 0.463116 GACCCATATTCGGCGTGGTT 60.463 55.000 6.85 0.00 0.00 3.67
85 86 1.145377 GACCCATATTCGGCGTGGT 59.855 57.895 6.85 5.27 0.00 4.16
86 87 0.677288 TAGACCCATATTCGGCGTGG 59.323 55.000 6.85 7.08 0.00 4.94
87 88 2.743636 ATAGACCCATATTCGGCGTG 57.256 50.000 6.85 0.00 0.00 5.34
88 89 2.897969 AGAATAGACCCATATTCGGCGT 59.102 45.455 6.85 0.00 43.79 5.68
89 90 3.512680 GAGAATAGACCCATATTCGGCG 58.487 50.000 0.00 0.00 43.79 6.46
90 91 3.512680 CGAGAATAGACCCATATTCGGC 58.487 50.000 0.00 0.00 43.79 5.54
91 92 3.512680 GCGAGAATAGACCCATATTCGG 58.487 50.000 0.00 0.00 43.79 4.30
92 93 3.056821 TGGCGAGAATAGACCCATATTCG 60.057 47.826 0.00 0.00 43.79 3.34
93 94 4.537135 TGGCGAGAATAGACCCATATTC 57.463 45.455 0.00 0.00 40.83 1.75
94 95 6.408548 CCATATGGCGAGAATAGACCCATATT 60.409 42.308 9.29 0.00 43.27 1.28
95 96 5.070981 CCATATGGCGAGAATAGACCCATAT 59.929 44.000 9.29 4.99 45.41 1.78
96 97 4.405680 CCATATGGCGAGAATAGACCCATA 59.594 45.833 9.29 0.00 41.32 2.74
97 98 3.198635 CCATATGGCGAGAATAGACCCAT 59.801 47.826 9.29 0.00 39.47 4.00
98 99 2.567169 CCATATGGCGAGAATAGACCCA 59.433 50.000 9.29 0.00 0.00 4.51
99 100 2.093447 CCCATATGGCGAGAATAGACCC 60.093 54.545 16.97 0.00 0.00 4.46
100 101 3.252974 CCCATATGGCGAGAATAGACC 57.747 52.381 16.97 0.00 0.00 3.85
112 113 3.188460 CGACGAATAAAAGGCCCATATGG 59.812 47.826 15.41 15.41 37.09 2.74
113 114 4.062293 TCGACGAATAAAAGGCCCATATG 58.938 43.478 0.00 0.00 0.00 1.78
114 115 4.345859 TCGACGAATAAAAGGCCCATAT 57.654 40.909 0.00 0.00 0.00 1.78
115 116 3.823281 TCGACGAATAAAAGGCCCATA 57.177 42.857 0.00 0.00 0.00 2.74
116 117 2.702592 TCGACGAATAAAAGGCCCAT 57.297 45.000 0.00 0.00 0.00 4.00
117 118 2.476126 TTCGACGAATAAAAGGCCCA 57.524 45.000 6.10 0.00 0.00 5.36
118 119 4.102649 CAATTTCGACGAATAAAAGGCCC 58.897 43.478 11.71 0.00 0.00 5.80
119 120 4.102649 CCAATTTCGACGAATAAAAGGCC 58.897 43.478 11.71 0.00 0.00 5.19
120 121 4.102649 CCCAATTTCGACGAATAAAAGGC 58.897 43.478 11.71 0.00 0.00 4.35
121 122 4.102649 GCCCAATTTCGACGAATAAAAGG 58.897 43.478 11.71 9.94 0.00 3.11
122 123 4.793216 CAGCCCAATTTCGACGAATAAAAG 59.207 41.667 11.71 2.38 0.00 2.27
123 124 4.728534 CAGCCCAATTTCGACGAATAAAA 58.271 39.130 11.71 0.00 0.00 1.52
124 125 3.426963 GCAGCCCAATTTCGACGAATAAA 60.427 43.478 11.71 0.00 0.00 1.40
125 126 2.096819 GCAGCCCAATTTCGACGAATAA 59.903 45.455 11.71 0.00 0.00 1.40
126 127 1.668751 GCAGCCCAATTTCGACGAATA 59.331 47.619 11.71 3.16 0.00 1.75
127 128 0.451783 GCAGCCCAATTTCGACGAAT 59.548 50.000 11.71 0.00 0.00 3.34
128 129 0.886938 TGCAGCCCAATTTCGACGAA 60.887 50.000 6.10 6.10 0.00 3.85
129 130 0.886938 TTGCAGCCCAATTTCGACGA 60.887 50.000 0.00 0.00 0.00 4.20
130 131 0.039617 TTTGCAGCCCAATTTCGACG 60.040 50.000 0.00 0.00 32.49 5.12
131 132 1.000274 ACTTTGCAGCCCAATTTCGAC 60.000 47.619 0.00 0.00 32.49 4.20
132 133 1.000385 CACTTTGCAGCCCAATTTCGA 60.000 47.619 0.00 0.00 32.49 3.71
133 134 1.421382 CACTTTGCAGCCCAATTTCG 58.579 50.000 0.00 0.00 32.49 3.46
134 135 1.608801 CCCACTTTGCAGCCCAATTTC 60.609 52.381 0.00 0.00 32.49 2.17
135 136 0.397564 CCCACTTTGCAGCCCAATTT 59.602 50.000 0.00 0.00 32.49 1.82
136 137 2.060370 CCCACTTTGCAGCCCAATT 58.940 52.632 0.00 0.00 32.49 2.32
137 138 2.586293 GCCCACTTTGCAGCCCAAT 61.586 57.895 0.00 0.00 32.49 3.16
138 139 3.233231 GCCCACTTTGCAGCCCAA 61.233 61.111 0.00 0.00 0.00 4.12
141 142 2.115734 AATTGGCCCACTTTGCAGCC 62.116 55.000 0.00 5.48 45.96 4.85
142 143 0.250424 AAATTGGCCCACTTTGCAGC 60.250 50.000 0.00 0.00 0.00 5.25
143 144 1.799544 GAAATTGGCCCACTTTGCAG 58.200 50.000 3.51 0.00 0.00 4.41
144 145 0.033228 CGAAATTGGCCCACTTTGCA 59.967 50.000 3.51 0.00 0.00 4.08
145 146 0.670239 CCGAAATTGGCCCACTTTGC 60.670 55.000 3.51 0.00 0.00 3.68
146 147 3.512978 CCGAAATTGGCCCACTTTG 57.487 52.632 3.51 0.00 0.00 2.77
155 156 3.825611 CCCAGGCGCCGAAATTGG 61.826 66.667 23.20 22.32 0.00 3.16
156 157 3.825611 CCCCAGGCGCCGAAATTG 61.826 66.667 23.20 13.64 0.00 2.32
186 187 3.342627 TTTTGCGCCCAGTCGTCG 61.343 61.111 4.18 0.00 0.00 5.12
187 188 2.251371 GTTTTGCGCCCAGTCGTC 59.749 61.111 4.18 0.00 0.00 4.20
188 189 3.284449 GGTTTTGCGCCCAGTCGT 61.284 61.111 4.18 0.00 0.00 4.34
189 190 4.383602 CGGTTTTGCGCCCAGTCG 62.384 66.667 4.18 0.00 0.00 4.18
190 191 3.249973 GACGGTTTTGCGCCCAGTC 62.250 63.158 4.18 7.23 0.00 3.51
191 192 3.284449 GACGGTTTTGCGCCCAGT 61.284 61.111 4.18 1.16 0.00 4.00
192 193 4.038080 GGACGGTTTTGCGCCCAG 62.038 66.667 4.18 0.00 0.00 4.45
194 195 3.905437 TAGGGACGGTTTTGCGCCC 62.905 63.158 4.18 0.00 39.12 6.13
195 196 2.358984 TAGGGACGGTTTTGCGCC 60.359 61.111 4.18 0.00 0.00 6.53
196 197 3.035576 GCTAGGGACGGTTTTGCGC 62.036 63.158 0.00 0.00 0.00 6.09
197 198 2.736682 CGCTAGGGACGGTTTTGCG 61.737 63.158 0.00 0.00 36.19 4.85
198 199 3.035576 GCGCTAGGGACGGTTTTGC 62.036 63.158 11.61 0.00 0.00 3.68
199 200 2.396157 GGCGCTAGGGACGGTTTTG 61.396 63.158 11.61 0.00 0.00 2.44
200 201 2.046604 GGCGCTAGGGACGGTTTT 60.047 61.111 11.61 0.00 0.00 2.43
201 202 4.446413 CGGCGCTAGGGACGGTTT 62.446 66.667 26.34 0.00 0.00 3.27
205 206 4.554363 CACTCGGCGCTAGGGACG 62.554 72.222 27.89 27.89 0.00 4.79
206 207 1.453762 ATACACTCGGCGCTAGGGAC 61.454 60.000 17.58 6.81 0.00 4.46
207 208 1.152819 ATACACTCGGCGCTAGGGA 60.153 57.895 17.58 5.38 0.00 4.20
208 209 1.286260 GATACACTCGGCGCTAGGG 59.714 63.158 7.64 9.36 0.00 3.53
209 210 1.082038 CGATACACTCGGCGCTAGG 60.082 63.158 7.64 0.00 43.82 3.02
210 211 4.516942 CGATACACTCGGCGCTAG 57.483 61.111 7.64 8.16 43.82 3.42
218 219 2.353607 CGAGCCGGCGATACACTC 60.354 66.667 23.20 10.39 0.00 3.51
219 220 3.900892 CCGAGCCGGCGATACACT 61.901 66.667 23.20 0.00 41.17 3.55
220 221 4.944372 CCCGAGCCGGCGATACAC 62.944 72.222 23.20 8.62 46.86 2.90
223 224 4.988716 ATCCCCGAGCCGGCGATA 62.989 66.667 23.20 5.02 41.85 2.92
227 228 3.774599 AAATCATCCCCGAGCCGGC 62.775 63.158 21.89 21.89 46.86 6.13
229 230 1.961793 TAAAAATCATCCCCGAGCCG 58.038 50.000 0.00 0.00 0.00 5.52
230 231 2.029918 GCATAAAAATCATCCCCGAGCC 60.030 50.000 0.00 0.00 0.00 4.70
231 232 2.350772 CGCATAAAAATCATCCCCGAGC 60.351 50.000 0.00 0.00 0.00 5.03
232 233 2.878406 ACGCATAAAAATCATCCCCGAG 59.122 45.455 0.00 0.00 0.00 4.63
233 234 2.875933 GACGCATAAAAATCATCCCCGA 59.124 45.455 0.00 0.00 0.00 5.14
234 235 2.031157 GGACGCATAAAAATCATCCCCG 60.031 50.000 0.00 0.00 0.00 5.73
235 236 3.004734 CAGGACGCATAAAAATCATCCCC 59.995 47.826 0.00 0.00 0.00 4.81
236 237 3.004734 CCAGGACGCATAAAAATCATCCC 59.995 47.826 0.00 0.00 0.00 3.85
237 238 3.004734 CCCAGGACGCATAAAAATCATCC 59.995 47.826 0.00 0.00 0.00 3.51
238 239 3.882888 TCCCAGGACGCATAAAAATCATC 59.117 43.478 0.00 0.00 0.00 2.92
239 240 3.885297 CTCCCAGGACGCATAAAAATCAT 59.115 43.478 0.00 0.00 0.00 2.45
240 241 3.278574 CTCCCAGGACGCATAAAAATCA 58.721 45.455 0.00 0.00 0.00 2.57
241 242 2.618709 CCTCCCAGGACGCATAAAAATC 59.381 50.000 0.00 0.00 37.67 2.17
242 243 2.654863 CCTCCCAGGACGCATAAAAAT 58.345 47.619 0.00 0.00 37.67 1.82
243 244 1.340600 CCCTCCCAGGACGCATAAAAA 60.341 52.381 0.00 0.00 37.67 1.94
244 245 0.254747 CCCTCCCAGGACGCATAAAA 59.745 55.000 0.00 0.00 37.67 1.52
245 246 1.912220 CCCTCCCAGGACGCATAAA 59.088 57.895 0.00 0.00 37.67 1.40
246 247 2.742116 GCCCTCCCAGGACGCATAA 61.742 63.158 0.00 0.00 37.67 1.90
247 248 3.161450 GCCCTCCCAGGACGCATA 61.161 66.667 0.00 0.00 37.67 3.14
251 252 4.410400 GTTGGCCCTCCCAGGACG 62.410 72.222 0.00 0.00 46.39 4.79
252 253 4.410400 CGTTGGCCCTCCCAGGAC 62.410 72.222 0.00 0.00 46.39 3.85
270 271 2.645838 TTGATTAGGGCATCTCCAGC 57.354 50.000 0.00 0.00 36.21 4.85
271 272 4.467769 ACATTTGATTAGGGCATCTCCAG 58.532 43.478 0.00 0.00 36.21 3.86
272 273 4.166725 AGACATTTGATTAGGGCATCTCCA 59.833 41.667 0.00 0.00 36.21 3.86
273 274 4.518211 CAGACATTTGATTAGGGCATCTCC 59.482 45.833 0.00 0.00 0.00 3.71
274 275 4.023365 GCAGACATTTGATTAGGGCATCTC 60.023 45.833 0.00 0.00 0.00 2.75
275 276 3.887716 GCAGACATTTGATTAGGGCATCT 59.112 43.478 0.00 0.00 0.00 2.90
276 277 3.887716 AGCAGACATTTGATTAGGGCATC 59.112 43.478 0.00 0.00 0.00 3.91
277 278 3.907221 AGCAGACATTTGATTAGGGCAT 58.093 40.909 0.00 0.00 0.00 4.40
278 279 3.370840 AGCAGACATTTGATTAGGGCA 57.629 42.857 0.00 0.00 0.00 5.36
279 280 4.725790 AAAGCAGACATTTGATTAGGGC 57.274 40.909 0.00 0.00 0.00 5.19
280 281 6.271488 TCAAAAGCAGACATTTGATTAGGG 57.729 37.500 0.00 0.00 38.27 3.53
281 282 8.767478 AATTCAAAAGCAGACATTTGATTAGG 57.233 30.769 2.20 0.00 41.59 2.69
291 292 5.321959 TGTGTGAAATTCAAAAGCAGACA 57.678 34.783 0.00 0.00 31.51 3.41
298 299 7.064371 CCACAGTGATTTGTGTGAAATTCAAAA 59.936 33.333 0.62 0.00 45.84 2.44
308 309 1.267806 GAGGCCACAGTGATTTGTGTG 59.732 52.381 5.01 0.00 45.44 3.82
325 326 9.459640 CATATGTCAATAAAAGAAATGCAGAGG 57.540 33.333 0.00 0.00 0.00 3.69
332 333 8.310122 AGCCCACATATGTCAATAAAAGAAAT 57.690 30.769 5.07 0.00 0.00 2.17
336 337 6.732154 CAGAGCCCACATATGTCAATAAAAG 58.268 40.000 5.07 0.00 0.00 2.27
341 342 2.174210 AGCAGAGCCCACATATGTCAAT 59.826 45.455 5.07 0.00 0.00 2.57
344 345 2.338577 AAGCAGAGCCCACATATGTC 57.661 50.000 5.07 0.00 0.00 3.06
345 346 2.756760 CAAAAGCAGAGCCCACATATGT 59.243 45.455 1.41 1.41 0.00 2.29
346 347 2.100252 CCAAAAGCAGAGCCCACATATG 59.900 50.000 0.00 0.00 0.00 1.78
347 348 2.025037 TCCAAAAGCAGAGCCCACATAT 60.025 45.455 0.00 0.00 0.00 1.78
348 349 1.354031 TCCAAAAGCAGAGCCCACATA 59.646 47.619 0.00 0.00 0.00 2.29
349 350 0.112995 TCCAAAAGCAGAGCCCACAT 59.887 50.000 0.00 0.00 0.00 3.21
352 363 1.600636 CGTCCAAAAGCAGAGCCCA 60.601 57.895 0.00 0.00 0.00 5.36
468 479 3.723348 GGTTGGAACGGCGTCTGC 61.723 66.667 15.17 9.85 41.71 4.26
581 592 1.817099 GCAGTCCCAATGCCGAGAG 60.817 63.158 0.00 0.00 37.73 3.20
582 593 2.268920 GCAGTCCCAATGCCGAGA 59.731 61.111 0.00 0.00 37.73 4.04
659 672 3.367395 GCTGGATTTTTAAGTGTGCTCCC 60.367 47.826 0.00 0.00 0.00 4.30
665 678 3.252458 GGACGTGCTGGATTTTTAAGTGT 59.748 43.478 0.00 0.00 0.00 3.55
903 943 1.678970 GTCCAATTGCTTCCCCGCT 60.679 57.895 0.00 0.00 0.00 5.52
907 947 2.948315 GAGATCAGTCCAATTGCTTCCC 59.052 50.000 0.00 0.00 0.00 3.97
909 949 3.265791 ACGAGATCAGTCCAATTGCTTC 58.734 45.455 0.00 0.00 0.00 3.86
910 950 3.055530 AGACGAGATCAGTCCAATTGCTT 60.056 43.478 15.03 0.00 39.31 3.91
942 982 4.287766 AGAAACCTACAGACAATCCACC 57.712 45.455 0.00 0.00 0.00 4.61
1109 1158 2.366167 CCTGCTCCTCCTCCTCCA 59.634 66.667 0.00 0.00 0.00 3.86
1249 1298 4.410400 CTTGTCCCCGTCCCCTGC 62.410 72.222 0.00 0.00 0.00 4.85
1353 1402 2.892425 GCCTTGGTGATCTCGGCG 60.892 66.667 0.00 0.00 0.00 6.46
1551 1600 0.611896 AAAATGGAAGTGGGGGAGCG 60.612 55.000 0.00 0.00 0.00 5.03
1571 1620 3.274288 GCACTCTTTTATCCAGGTGAGG 58.726 50.000 0.00 0.00 0.00 3.86
1612 1661 6.932051 ACATTTTTATTTCAGTTGTTGTGCG 58.068 32.000 0.00 0.00 0.00 5.34
1643 1692 0.437295 CAGTTTTACCGAACTCGCCG 59.563 55.000 0.00 0.00 37.76 6.46
1726 1775 5.869753 AAAGATTCCTCAATCGTGTTCAG 57.130 39.130 0.00 0.00 43.05 3.02
1765 1814 9.793259 CCTACTTAAATAATGCTAAGGATTCCA 57.207 33.333 5.29 0.00 30.74 3.53
1794 1843 1.613630 TCCCCTCTCACCTCCTTGC 60.614 63.158 0.00 0.00 0.00 4.01
1849 1898 3.877508 CGGGATTCCTAAGCCTTTTACTG 59.122 47.826 2.01 0.00 37.07 2.74
1916 1965 6.091305 TCAAGAGAATTACACAAGAATCTGCG 59.909 38.462 0.00 0.00 0.00 5.18
1996 2046 3.643792 CCCCTCTAGAATCTAACCACCAG 59.356 52.174 0.00 0.00 0.00 4.00
2045 2095 6.876257 GGCCAATTCTCATGAAGTATACCTAG 59.124 42.308 0.00 0.00 35.44 3.02
2046 2096 6.558775 AGGCCAATTCTCATGAAGTATACCTA 59.441 38.462 5.01 0.00 35.44 3.08
2047 2097 5.370880 AGGCCAATTCTCATGAAGTATACCT 59.629 40.000 5.01 0.00 35.44 3.08
2048 2098 5.625150 AGGCCAATTCTCATGAAGTATACC 58.375 41.667 5.01 0.00 35.44 2.73
2158 2218 6.670695 AACTCATGGATAAGCAAAACCTTT 57.329 33.333 0.00 0.00 0.00 3.11
2182 2242 0.894184 TTTTTCCGCCAATGCCGGTA 60.894 50.000 1.72 0.00 45.71 4.02
2183 2243 2.153547 CTTTTTCCGCCAATGCCGGT 62.154 55.000 1.72 0.00 45.71 5.28
2184 2244 1.445926 CTTTTTCCGCCAATGCCGG 60.446 57.895 0.00 0.00 46.88 6.13
2185 2245 1.008361 CACTTTTTCCGCCAATGCCG 61.008 55.000 0.00 0.00 0.00 5.69
2187 2247 2.061028 CTTCACTTTTTCCGCCAATGC 58.939 47.619 0.00 0.00 0.00 3.56
2193 2253 2.774439 TTCTGCTTCACTTTTTCCGC 57.226 45.000 0.00 0.00 0.00 5.54
2246 2306 4.713792 ACCTTCATGTGGGAATATCTCC 57.286 45.455 12.25 0.00 44.54 3.71
2325 2507 8.138365 TGCTAAATAACTATTCCTGCTAAACG 57.862 34.615 0.00 0.00 0.00 3.60
2353 2660 0.512952 CTGGAAACTTGAACGAGGCG 59.487 55.000 0.00 0.00 0.00 5.52
2369 2676 2.689983 GGTGGACCATGCTTAATTCTGG 59.310 50.000 0.00 0.00 35.64 3.86
2390 2697 2.276732 TCTTGCCCTCAGAAAACAGG 57.723 50.000 0.00 0.00 0.00 4.00
2473 2780 9.581289 TTATCTTCTTCCCACTTCATTTTTACA 57.419 29.630 0.00 0.00 0.00 2.41
2481 2788 4.589908 GCCTTTATCTTCTTCCCACTTCA 58.410 43.478 0.00 0.00 0.00 3.02
2498 2805 2.185004 ACAGCTGTTGTATCGCCTTT 57.815 45.000 15.25 0.00 38.56 3.11
2549 2856 4.921470 ATCACGTTCCGAAGTTATTGTG 57.079 40.909 0.00 0.00 0.00 3.33
2668 2976 7.014518 CAGAAAATAGGTTGCATATCCATTCCA 59.985 37.037 0.00 0.00 0.00 3.53
2679 2987 4.973168 ACTCAGACAGAAAATAGGTTGCA 58.027 39.130 0.00 0.00 0.00 4.08
2789 3104 5.105146 ACAACTTCAACCAAAACATTAGCCA 60.105 36.000 0.00 0.00 0.00 4.75
2937 3290 2.241430 GGGGGCTGTAGTAACTTCCAAT 59.759 50.000 0.00 0.00 0.00 3.16
2984 3338 9.342308 GGGAAATATCAACTCAATAGATGACAA 57.658 33.333 0.00 0.00 37.35 3.18
3130 3497 8.242053 ACTCAAGAGTAAAATGATGAAATGCAG 58.758 33.333 0.00 0.00 40.43 4.41
3156 3523 6.101332 ACACGAAACGAGGTTATGCTTATAA 58.899 36.000 0.00 0.00 0.00 0.98
3224 3592 3.861840 TCTCGCAAATCCTAAGACAAGG 58.138 45.455 0.00 0.00 38.06 3.61
3262 3630 1.659794 GAAGCCAACCACGTTGCAT 59.340 52.632 0.00 0.00 41.62 3.96
3277 3645 2.049433 AACTCCGCGTCACCGAAG 60.049 61.111 4.92 0.00 35.63 3.79
3316 3684 2.820037 GTAGCTGCGGAGTTGCCC 60.820 66.667 5.62 0.00 0.00 5.36
3467 3835 5.472137 AGCTCTTTTTATTAACAAGTCGGCA 59.528 36.000 0.00 0.00 0.00 5.69
3511 3879 1.459592 CTGACACGACCCACGATTTTC 59.540 52.381 0.00 0.00 45.77 2.29
3524 3892 4.349663 TTCAAGTTTTTGACCTGACACG 57.650 40.909 0.00 0.00 42.79 4.49
3530 3898 4.817318 TTGCCTTTCAAGTTTTTGACCT 57.183 36.364 0.00 0.00 42.79 3.85
3547 3915 1.379044 CACTCCCACCCAGATTGCC 60.379 63.158 0.00 0.00 0.00 4.52
3583 3951 3.476552 TCACCTCCACTTCAACAATGAC 58.523 45.455 0.00 0.00 34.61 3.06
3676 4044 4.206375 CCCCATTTTCCCCATAAATTTGC 58.794 43.478 0.00 0.00 0.00 3.68
3677 4045 4.790937 CCCCCATTTTCCCCATAAATTTG 58.209 43.478 0.00 0.00 0.00 2.32
3680 4048 2.417652 GCCCCCATTTTCCCCATAAAT 58.582 47.619 0.00 0.00 0.00 1.40
3683 4051 1.231641 CGCCCCCATTTTCCCCATA 59.768 57.895 0.00 0.00 0.00 2.74
3684 4052 2.042025 CGCCCCCATTTTCCCCAT 60.042 61.111 0.00 0.00 0.00 4.00
3686 4054 3.074369 CACGCCCCCATTTTCCCC 61.074 66.667 0.00 0.00 0.00 4.81
3718 4086 0.036952 ACCCAGCACGAGAATCACAG 60.037 55.000 0.00 0.00 33.17 3.66
3729 4097 4.736126 ATTTAATTAAGCCACCCAGCAC 57.264 40.909 0.00 0.00 34.23 4.40
3790 4158 2.158449 GCAAACGGAGAACATCTGACAG 59.842 50.000 0.00 0.00 37.76 3.51
3813 4182 5.529430 TGAGTTGCAAGAAGAAAATAACGGA 59.471 36.000 0.00 0.00 0.00 4.69
3835 4204 1.009108 CACAACATGCGCCGTTTGA 60.009 52.632 16.22 0.00 0.00 2.69
3872 4243 0.598562 TCGCTGACAGAGGTTCAGTC 59.401 55.000 6.65 0.00 34.05 3.51
3896 4267 2.095263 CGACACACATTTGGTTCCCATC 60.095 50.000 0.00 0.00 31.53 3.51
3898 4269 1.313772 CGACACACATTTGGTTCCCA 58.686 50.000 0.00 0.00 0.00 4.37
3909 4280 3.478857 AGGAACCATTTACGACACACA 57.521 42.857 0.00 0.00 0.00 3.72
3914 4285 3.007635 CCCAGAAGGAACCATTTACGAC 58.992 50.000 0.00 0.00 38.24 4.34
3915 4286 2.907696 TCCCAGAAGGAACCATTTACGA 59.092 45.455 0.00 0.00 43.78 3.43
3916 4287 3.343941 TCCCAGAAGGAACCATTTACG 57.656 47.619 0.00 0.00 43.78 3.18
3927 4298 1.835693 GAGCCAGGATCCCAGAAGG 59.164 63.158 8.55 4.29 0.00 3.46
3928 4299 1.333636 ACGAGCCAGGATCCCAGAAG 61.334 60.000 8.55 0.00 0.00 2.85
3930 4301 2.060383 CACGAGCCAGGATCCCAGA 61.060 63.158 8.55 0.00 0.00 3.86
3932 4303 1.612146 TTCACGAGCCAGGATCCCA 60.612 57.895 8.55 0.00 0.00 4.37
3934 4305 1.519455 CGTTCACGAGCCAGGATCC 60.519 63.158 2.48 2.48 43.02 3.36
3935 4306 1.511305 TCGTTCACGAGCCAGGATC 59.489 57.895 0.00 0.00 44.22 3.36
3936 4307 3.694746 TCGTTCACGAGCCAGGAT 58.305 55.556 0.00 0.00 44.22 3.24
3944 4315 1.808945 GACTTCCCTAGTCGTTCACGA 59.191 52.381 0.00 0.00 43.59 4.35
3945 4316 2.259505 GACTTCCCTAGTCGTTCACG 57.740 55.000 0.00 0.00 43.59 4.35
3953 4324 3.256704 TGGGTCATTTGACTTCCCTAGT 58.743 45.455 10.32 0.00 44.20 2.57
3954 4325 4.010349 GTTGGGTCATTTGACTTCCCTAG 58.990 47.826 10.32 0.00 44.20 3.02
3955 4326 3.558321 CGTTGGGTCATTTGACTTCCCTA 60.558 47.826 10.32 0.00 44.20 3.53
3956 4327 2.814097 CGTTGGGTCATTTGACTTCCCT 60.814 50.000 10.32 0.00 44.20 4.20
3957 4328 1.539827 CGTTGGGTCATTTGACTTCCC 59.460 52.381 10.32 4.50 44.20 3.97
3958 4329 2.227194 ACGTTGGGTCATTTGACTTCC 58.773 47.619 10.32 5.11 44.20 3.46
3959 4330 3.982576 AACGTTGGGTCATTTGACTTC 57.017 42.857 0.00 4.62 44.20 3.01
3960 4331 6.399639 AATAAACGTTGGGTCATTTGACTT 57.600 33.333 0.00 0.00 44.20 3.01
3961 4332 6.349033 GCTAATAAACGTTGGGTCATTTGACT 60.349 38.462 0.00 0.00 44.20 3.41
3962 4333 5.798434 GCTAATAAACGTTGGGTCATTTGAC 59.202 40.000 0.00 1.99 44.04 3.18
3963 4334 5.391097 CGCTAATAAACGTTGGGTCATTTGA 60.391 40.000 0.00 0.00 0.00 2.69
3964 4335 4.791163 CGCTAATAAACGTTGGGTCATTTG 59.209 41.667 0.00 0.09 0.00 2.32
3965 4336 4.696402 TCGCTAATAAACGTTGGGTCATTT 59.304 37.500 0.00 0.00 0.00 2.32
3966 4337 4.255301 TCGCTAATAAACGTTGGGTCATT 58.745 39.130 0.00 0.00 0.00 2.57
3967 4338 3.864243 TCGCTAATAAACGTTGGGTCAT 58.136 40.909 0.00 0.00 0.00 3.06
3968 4339 3.316071 TCGCTAATAAACGTTGGGTCA 57.684 42.857 0.00 0.00 0.00 4.02
3969 4340 4.549489 CGATTCGCTAATAAACGTTGGGTC 60.549 45.833 0.00 0.00 0.00 4.46
3970 4341 3.307782 CGATTCGCTAATAAACGTTGGGT 59.692 43.478 0.00 0.00 0.00 4.51
3971 4342 3.552699 TCGATTCGCTAATAAACGTTGGG 59.447 43.478 0.00 0.00 0.00 4.12
3972 4343 4.765281 TCGATTCGCTAATAAACGTTGG 57.235 40.909 0.00 0.00 0.00 3.77
3973 4344 4.603146 GCATCGATTCGCTAATAAACGTTG 59.397 41.667 0.00 0.00 0.00 4.10
3974 4345 4.269123 TGCATCGATTCGCTAATAAACGTT 59.731 37.500 8.93 0.00 0.00 3.99
3975 4346 3.799963 TGCATCGATTCGCTAATAAACGT 59.200 39.130 8.93 0.00 0.00 3.99
3976 4347 4.134546 GTGCATCGATTCGCTAATAAACG 58.865 43.478 8.93 0.00 0.00 3.60
3977 4348 4.455124 GGTGCATCGATTCGCTAATAAAC 58.545 43.478 8.47 0.00 0.00 2.01
3989 4360 4.552365 CAGCCGGGGTGCATCGAT 62.552 66.667 14.01 0.00 0.00 3.59
4018 4389 5.069914 GGTCATTTTCCCCAGTTTTTACACT 59.930 40.000 0.00 0.00 0.00 3.55
4030 4401 1.814394 GTACGTTGGGTCATTTTCCCC 59.186 52.381 0.00 0.00 44.00 4.81
4031 4402 2.786777 AGTACGTTGGGTCATTTTCCC 58.213 47.619 0.00 0.00 44.81 3.97
4032 4403 4.572909 ACTAGTACGTTGGGTCATTTTCC 58.427 43.478 0.00 0.00 0.00 3.13
4033 4404 6.312180 CCTTACTAGTACGTTGGGTCATTTTC 59.688 42.308 0.91 0.00 0.00 2.29
4036 4407 4.774200 ACCTTACTAGTACGTTGGGTCATT 59.226 41.667 0.91 0.00 0.00 2.57
4037 4408 4.159135 CACCTTACTAGTACGTTGGGTCAT 59.841 45.833 0.91 0.00 0.00 3.06
4039 4410 3.507622 ACACCTTACTAGTACGTTGGGTC 59.492 47.826 0.91 0.00 0.00 4.46
4040 4411 3.500343 ACACCTTACTAGTACGTTGGGT 58.500 45.455 0.91 3.85 0.00 4.51
4041 4412 4.439289 GCTACACCTTACTAGTACGTTGGG 60.439 50.000 0.91 3.26 0.00 4.12
4042 4413 4.439289 GGCTACACCTTACTAGTACGTTGG 60.439 50.000 0.91 5.61 34.51 3.77
4043 4414 4.156556 TGGCTACACCTTACTAGTACGTTG 59.843 45.833 0.91 2.05 40.22 4.10
4044 4415 4.335416 TGGCTACACCTTACTAGTACGTT 58.665 43.478 0.91 0.00 40.22 3.99
4046 4417 3.243002 GCTGGCTACACCTTACTAGTACG 60.243 52.174 0.91 0.07 40.22 3.67
4061 4435 1.126488 CTCCTGAATCCTGCTGGCTA 58.874 55.000 4.42 0.00 0.00 3.93
4068 4442 0.179089 CGCAGTCCTCCTGAATCCTG 60.179 60.000 0.00 0.00 44.49 3.86
4069 4443 0.616111 ACGCAGTCCTCCTGAATCCT 60.616 55.000 0.00 0.00 44.49 3.24
4156 4547 3.649277 ATCCTCGGCGCTGTCACAC 62.649 63.158 17.37 0.00 0.00 3.82
4167 4558 2.031616 ATCGCATGGCATCCTCGG 59.968 61.111 0.00 0.00 0.00 4.63
4187 4583 4.451241 CTGACCCAGCCGATGATG 57.549 61.111 0.00 0.00 0.00 3.07
4279 4676 3.696548 TCAAAACACAAAATTTTGCCCCC 59.303 39.130 26.94 0.00 43.62 5.40
4282 4679 4.096231 AGGCTCAAAACACAAAATTTTGCC 59.904 37.500 26.94 19.31 43.62 4.52
4344 4741 4.891992 AGAAGGGTCAGATCTCGAAAAA 57.108 40.909 0.00 0.00 0.00 1.94
4345 4742 5.017490 AGTAGAAGGGTCAGATCTCGAAAA 58.983 41.667 0.00 0.00 0.00 2.29
4346 4743 4.601084 AGTAGAAGGGTCAGATCTCGAAA 58.399 43.478 0.00 0.00 0.00 3.46
4347 4744 4.237976 AGTAGAAGGGTCAGATCTCGAA 57.762 45.455 0.00 0.00 0.00 3.71
4348 4745 3.935818 AGTAGAAGGGTCAGATCTCGA 57.064 47.619 0.00 0.00 0.00 4.04
4349 4746 5.533154 ACAATAGTAGAAGGGTCAGATCTCG 59.467 44.000 0.00 0.00 0.00 4.04
4350 4747 6.293735 CGACAATAGTAGAAGGGTCAGATCTC 60.294 46.154 0.00 0.00 0.00 2.75
4351 4748 5.533154 CGACAATAGTAGAAGGGTCAGATCT 59.467 44.000 0.00 0.00 0.00 2.75
4352 4749 5.278561 CCGACAATAGTAGAAGGGTCAGATC 60.279 48.000 0.00 0.00 0.00 2.75
4353 4750 4.585162 CCGACAATAGTAGAAGGGTCAGAT 59.415 45.833 0.00 0.00 0.00 2.90
4354 4751 3.952323 CCGACAATAGTAGAAGGGTCAGA 59.048 47.826 0.00 0.00 0.00 3.27
4355 4752 3.068307 CCCGACAATAGTAGAAGGGTCAG 59.932 52.174 0.00 0.00 33.00 3.51
4356 4753 3.028850 CCCGACAATAGTAGAAGGGTCA 58.971 50.000 0.00 0.00 33.00 4.02
4357 4754 2.364647 CCCCGACAATAGTAGAAGGGTC 59.635 54.545 0.00 0.00 35.75 4.46
4358 4755 2.292719 ACCCCGACAATAGTAGAAGGGT 60.293 50.000 0.00 0.00 41.76 4.34
4359 4756 2.364647 GACCCCGACAATAGTAGAAGGG 59.635 54.545 0.00 0.00 39.33 3.95
4360 4757 2.364647 GGACCCCGACAATAGTAGAAGG 59.635 54.545 0.00 0.00 0.00 3.46
4361 4758 3.028850 TGGACCCCGACAATAGTAGAAG 58.971 50.000 0.00 0.00 0.00 2.85
4362 4759 3.104519 TGGACCCCGACAATAGTAGAA 57.895 47.619 0.00 0.00 0.00 2.10
4363 4760 2.832643 TGGACCCCGACAATAGTAGA 57.167 50.000 0.00 0.00 0.00 2.59
4364 4761 2.037251 CCATGGACCCCGACAATAGTAG 59.963 54.545 5.56 0.00 0.00 2.57
4365 4762 2.043992 CCATGGACCCCGACAATAGTA 58.956 52.381 5.56 0.00 0.00 1.82
4366 4763 0.837272 CCATGGACCCCGACAATAGT 59.163 55.000 5.56 0.00 0.00 2.12
4367 4764 0.837272 ACCATGGACCCCGACAATAG 59.163 55.000 21.47 0.00 0.00 1.73
4368 4765 0.544223 CACCATGGACCCCGACAATA 59.456 55.000 21.47 0.00 0.00 1.90
4369 4766 1.302949 CACCATGGACCCCGACAAT 59.697 57.895 21.47 0.00 0.00 2.71
4370 4767 2.753701 CACCATGGACCCCGACAA 59.246 61.111 21.47 0.00 0.00 3.18
4371 4768 2.750337 TACCACCATGGACCCCGACA 62.750 60.000 21.47 0.00 40.96 4.35
4372 4769 1.968050 CTACCACCATGGACCCCGAC 61.968 65.000 21.47 0.00 40.96 4.79
4373 4770 1.687840 CTACCACCATGGACCCCGA 60.688 63.158 21.47 0.00 40.96 5.14
4374 4771 2.742116 CCTACCACCATGGACCCCG 61.742 68.421 21.47 3.41 40.96 5.73
4375 4772 2.383601 CCCTACCACCATGGACCCC 61.384 68.421 21.47 0.00 40.96 4.95
4376 4773 1.618447 ACCCTACCACCATGGACCC 60.618 63.158 21.47 0.00 40.96 4.46
4377 4774 1.205460 ACACCCTACCACCATGGACC 61.205 60.000 21.47 0.00 40.96 4.46
4378 4775 1.575419 TACACCCTACCACCATGGAC 58.425 55.000 21.47 0.00 40.96 4.02
4379 4776 1.910671 GTTACACCCTACCACCATGGA 59.089 52.381 21.47 0.00 40.96 3.41
4380 4777 1.631388 TGTTACACCCTACCACCATGG 59.369 52.381 11.19 11.19 45.02 3.66
4381 4778 2.939640 GCTGTTACACCCTACCACCATG 60.940 54.545 0.00 0.00 0.00 3.66
4382 4779 1.280998 GCTGTTACACCCTACCACCAT 59.719 52.381 0.00 0.00 0.00 3.55
4383 4780 0.688487 GCTGTTACACCCTACCACCA 59.312 55.000 0.00 0.00 0.00 4.17
4384 4781 0.035725 GGCTGTTACACCCTACCACC 60.036 60.000 0.00 0.00 0.00 4.61
4385 4782 0.981943 AGGCTGTTACACCCTACCAC 59.018 55.000 0.00 0.00 0.00 4.16
4386 4783 2.627148 TAGGCTGTTACACCCTACCA 57.373 50.000 2.49 0.00 0.00 3.25
4387 4784 2.035576 CGATAGGCTGTTACACCCTACC 59.964 54.545 8.45 0.00 34.29 3.18
4388 4785 2.545322 GCGATAGGCTGTTACACCCTAC 60.545 54.545 8.45 3.35 39.11 3.18
4389 4786 1.684983 GCGATAGGCTGTTACACCCTA 59.315 52.381 8.68 8.68 39.11 3.53
4390 4787 0.464452 GCGATAGGCTGTTACACCCT 59.536 55.000 4.50 4.50 39.11 4.34
4391 4788 2.987752 GCGATAGGCTGTTACACCC 58.012 57.895 0.00 0.00 39.11 4.61
4402 4799 0.830648 TCAAAGTCCCTGGCGATAGG 59.169 55.000 0.00 0.00 37.59 2.57
4403 4800 1.802880 CGTCAAAGTCCCTGGCGATAG 60.803 57.143 0.00 0.00 44.51 2.08
4404 4801 0.174845 CGTCAAAGTCCCTGGCGATA 59.825 55.000 0.00 0.00 44.51 2.92
4405 4802 1.079127 CGTCAAAGTCCCTGGCGAT 60.079 57.895 0.00 0.00 44.51 4.58
4406 4803 2.342279 CGTCAAAGTCCCTGGCGA 59.658 61.111 0.00 0.00 44.51 5.54
4407 4804 0.174845 TATCGTCAAAGTCCCTGGCG 59.825 55.000 0.00 0.00 43.14 5.69
4408 4805 1.480954 TCTATCGTCAAAGTCCCTGGC 59.519 52.381 0.00 0.00 0.00 4.85
4409 4806 3.887621 TTCTATCGTCAAAGTCCCTGG 57.112 47.619 0.00 0.00 0.00 4.45
4410 4807 4.994852 TGTTTTCTATCGTCAAAGTCCCTG 59.005 41.667 0.00 0.00 0.00 4.45
4411 4808 5.223449 TGTTTTCTATCGTCAAAGTCCCT 57.777 39.130 0.00 0.00 0.00 4.20
4412 4809 5.064834 GGATGTTTTCTATCGTCAAAGTCCC 59.935 44.000 0.00 0.00 0.00 4.46
4413 4810 5.064834 GGGATGTTTTCTATCGTCAAAGTCC 59.935 44.000 0.00 0.00 0.00 3.85
4414 4811 5.875359 AGGGATGTTTTCTATCGTCAAAGTC 59.125 40.000 0.00 0.00 0.00 3.01
4415 4812 5.805728 AGGGATGTTTTCTATCGTCAAAGT 58.194 37.500 0.00 0.00 0.00 2.66
4416 4813 6.743575 AAGGGATGTTTTCTATCGTCAAAG 57.256 37.500 0.00 0.00 0.00 2.77
4417 4814 6.128391 CGAAAGGGATGTTTTCTATCGTCAAA 60.128 38.462 0.00 0.00 33.44 2.69
4418 4815 5.350365 CGAAAGGGATGTTTTCTATCGTCAA 59.650 40.000 0.00 0.00 33.44 3.18
4419 4816 4.868171 CGAAAGGGATGTTTTCTATCGTCA 59.132 41.667 0.00 0.00 33.44 4.35
4420 4817 4.260253 GCGAAAGGGATGTTTTCTATCGTC 60.260 45.833 0.00 0.00 33.44 4.20
4421 4818 3.621715 GCGAAAGGGATGTTTTCTATCGT 59.378 43.478 0.00 0.00 33.44 3.73
4422 4819 4.197107 GCGAAAGGGATGTTTTCTATCG 57.803 45.455 0.00 0.00 33.44 2.92
4435 4832 1.372499 TTCGTCACTCGCGAAAGGG 60.372 57.895 11.33 0.00 43.98 3.95
4436 4833 4.238385 TTCGTCACTCGCGAAAGG 57.762 55.556 11.33 0.21 43.98 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.