Multiple sequence alignment - TraesCS3A01G365000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G365000 chr3A 100.000 5611 0 0 1 5611 614464141 614469751 0.000000e+00 10362.0
1 TraesCS3A01G365000 chr3D 96.219 3835 119 16 462 4287 471582735 471586552 0.000000e+00 6255.0
2 TraesCS3A01G365000 chr3D 88.525 915 46 14 4391 5281 471586550 471587429 0.000000e+00 1053.0
3 TraesCS3A01G365000 chr3D 84.896 384 41 13 1 370 471582309 471582689 6.870000e-99 372.0
4 TraesCS3A01G365000 chr3D 99.099 111 1 0 4285 4395 560754718 560754608 3.430000e-47 200.0
5 TraesCS3A01G365000 chr3B 94.212 1365 63 10 2927 4287 627201693 627203045 0.000000e+00 2069.0
6 TraesCS3A01G365000 chr3B 88.611 1677 120 30 3 1633 627198535 627200186 0.000000e+00 1973.0
7 TraesCS3A01G365000 chr3B 96.831 915 25 4 1760 2671 627200745 627201658 0.000000e+00 1526.0
8 TraesCS3A01G365000 chr3B 88.782 731 50 8 4391 5097 627203043 627203765 0.000000e+00 867.0
9 TraesCS3A01G365000 chr3B 97.826 46 0 1 5459 5503 526936501 526936456 1.680000e-10 78.7
10 TraesCS3A01G365000 chr3B 100.000 41 0 0 3093 3133 627201656 627201696 6.030000e-10 76.8
11 TraesCS3A01G365000 chr3B 91.304 46 4 0 5203 5248 662510450 662510495 4.690000e-06 63.9
12 TraesCS3A01G365000 chr5D 99.115 113 1 0 4280 4392 70640479 70640591 2.650000e-48 204.0
13 TraesCS3A01G365000 chr5D 96.226 53 2 0 1626 1678 507553661 507553713 2.780000e-13 87.9
14 TraesCS3A01G365000 chr2A 100.000 109 0 0 4285 4393 180979155 180979263 9.530000e-48 202.0
15 TraesCS3A01G365000 chr2A 74.214 159 32 6 5458 5611 712547472 712547626 2.180000e-04 58.4
16 TraesCS3A01G365000 chr1D 100.000 109 0 0 4284 4392 459859038 459859146 9.530000e-48 202.0
17 TraesCS3A01G365000 chr1D 77.311 238 38 12 120 348 438180190 438180420 5.900000e-25 126.0
18 TraesCS3A01G365000 chr1D 84.298 121 18 1 3729 3848 377192850 377192730 3.550000e-22 117.0
19 TraesCS3A01G365000 chr1D 77.723 202 31 11 120 313 438203334 438203529 1.650000e-20 111.0
20 TraesCS3A01G365000 chr1D 77.021 235 29 18 120 348 438221221 438221436 1.650000e-20 111.0
21 TraesCS3A01G365000 chr1A 100.000 109 0 0 4284 4392 489169899 489169791 9.530000e-48 202.0
22 TraesCS3A01G365000 chr1A 82.258 124 18 4 120 240 534929592 534929714 2.770000e-18 104.0
23 TraesCS3A01G365000 chr7D 98.246 114 2 0 4285 4398 621738347 621738234 3.430000e-47 200.0
24 TraesCS3A01G365000 chr7D 96.226 53 2 0 1626 1678 321247741 321247793 2.780000e-13 87.9
25 TraesCS3A01G365000 chr2B 96.667 120 4 0 4282 4401 764753869 764753988 3.430000e-47 200.0
26 TraesCS3A01G365000 chr2B 97.414 116 3 0 4285 4400 621062527 621062642 1.230000e-46 198.0
27 TraesCS3A01G365000 chr2B 96.226 53 2 0 1626 1678 89311893 89311841 2.780000e-13 87.9
28 TraesCS3A01G365000 chr2B 90.476 63 4 2 1626 1688 669438759 669438699 1.300000e-11 82.4
29 TraesCS3A01G365000 chr6A 94.444 126 4 3 4284 4409 33557370 33557492 2.060000e-44 191.0
30 TraesCS3A01G365000 chr1B 76.190 252 39 10 120 367 593833962 593834196 4.590000e-21 113.0
31 TraesCS3A01G365000 chr5A 80.916 131 16 5 114 235 595397984 595397854 1.660000e-15 95.3
32 TraesCS3A01G365000 chr7B 77.987 159 26 7 5458 5611 46989300 46989454 2.150000e-14 91.6
33 TraesCS3A01G365000 chr4D 96.296 54 2 0 1626 1679 310628714 310628767 7.740000e-14 89.8
34 TraesCS3A01G365000 chr4D 93.333 60 1 3 1625 1683 108302721 108302778 1.000000e-12 86.1
35 TraesCS3A01G365000 chr4B 96.226 53 2 0 1626 1678 570801894 570801842 2.780000e-13 87.9
36 TraesCS3A01G365000 chr2D 90.323 62 6 0 1626 1687 67559275 67559336 1.300000e-11 82.4
37 TraesCS3A01G365000 chr7A 92.157 51 3 1 5461 5510 685592236 685592186 2.800000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G365000 chr3A 614464141 614469751 5610 False 10362.00 10362 100.0000 1 5611 1 chr3A.!!$F1 5610
1 TraesCS3A01G365000 chr3D 471582309 471587429 5120 False 2560.00 6255 89.8800 1 5281 3 chr3D.!!$F1 5280
2 TraesCS3A01G365000 chr3B 627198535 627203765 5230 False 1302.36 2069 93.6872 3 5097 5 chr3B.!!$F2 5094

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
637 674 0.400975 TAAGCCCGCCACTTTTACCA 59.599 50.000 0.0 0.0 0.00 3.25 F
1458 1508 0.486879 TGGATTTGGAGGGCTGGTTT 59.513 50.000 0.0 0.0 0.00 3.27 F
2671 3217 2.618241 TCTTAGCAAGCAACCAACACAG 59.382 45.455 0.0 0.0 0.00 3.66 F
3194 3740 0.677731 CATGTCCCAACCAGCGACAT 60.678 55.000 0.0 0.0 45.73 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2009 2552 0.031314 CGAGATCCTGTCGTCCATGG 59.969 60.000 4.97 4.97 32.62 3.66 R
2743 3289 1.258982 GCAATCGACTAAGCCATCGTG 59.741 52.381 0.00 0.00 39.38 4.35 R
4562 5131 0.163788 GCGTGTGGTTCATGTCTTCG 59.836 55.000 0.00 0.00 35.64 3.79 R
4623 5194 0.179234 TGAAAGACAAGCACCCGACA 59.821 50.000 0.00 0.00 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 6.148811 ACATGGATAAACAGAAAAACGATCGT 59.851 34.615 16.60 16.60 0.00 3.73
83 97 7.599621 TGGATAAACAGAAAAACGATCGTTCTA 59.400 33.333 31.78 11.52 37.35 2.10
92 106 6.853279 AAAACGATCGTTCTATTTTGCATG 57.147 33.333 31.78 0.00 37.35 4.06
93 107 5.794687 AACGATCGTTCTATTTTGCATGA 57.205 34.783 27.11 0.00 32.09 3.07
110 124 1.090728 TGAGAGAGCGTAGTGAGCAG 58.909 55.000 0.00 0.00 37.01 4.24
128 143 2.416547 GCAGTAATGCTCTCGCTTTCAA 59.583 45.455 8.13 0.00 35.44 2.69
132 147 5.736358 CAGTAATGCTCTCGCTTTCAATTTC 59.264 40.000 0.00 0.00 35.44 2.17
138 153 5.048504 TGCTCTCGCTTTCAATTTCAGAAAT 60.049 36.000 2.20 2.20 34.75 2.17
167 183 5.406175 CAGCAACAACCGAAATCATTGAAAT 59.594 36.000 0.00 0.00 0.00 2.17
170 186 7.655328 AGCAACAACCGAAATCATTGAAATTTA 59.345 29.630 0.00 0.00 0.00 1.40
189 205 9.952341 GAAATTTAAGTTAATTCGGTTTGCATC 57.048 29.630 0.00 0.00 0.00 3.91
218 234 6.375377 CCAAAATGCTGAAACATTCAATTGG 58.625 36.000 5.42 5.33 39.32 3.16
296 313 6.717289 TCCATGTGCACTACTAAAATTACCT 58.283 36.000 19.41 0.00 0.00 3.08
297 314 6.597672 TCCATGTGCACTACTAAAATTACCTG 59.402 38.462 19.41 0.00 0.00 4.00
338 356 9.646522 AGGTAAATATTTCAATGCCTACTGAAT 57.353 29.630 3.39 0.00 31.85 2.57
365 383 8.956533 TCGGTGAATTTTATCATAATCTCACA 57.043 30.769 12.59 0.00 34.89 3.58
448 485 6.720012 TTTCGTAATACCCCTTTCGTAAAC 57.280 37.500 0.00 0.00 0.00 2.01
450 487 5.410067 TCGTAATACCCCTTTCGTAAACAG 58.590 41.667 0.00 0.00 0.00 3.16
460 497 7.066645 ACCCCTTTCGTAAACAGATATAAAAGC 59.933 37.037 0.00 0.00 0.00 3.51
472 509 9.783256 AACAGATATAAAAGCGTTTAAATCACC 57.217 29.630 8.90 0.00 32.98 4.02
483 520 6.653320 AGCGTTTAAATCACCACTTTAGATGA 59.347 34.615 0.00 0.00 0.00 2.92
487 524 9.788960 GTTTAAATCACCACTTTAGATGAATCC 57.211 33.333 0.00 0.00 0.00 3.01
495 532 8.840321 CACCACTTTAGATGAATCCGAATTTAT 58.160 33.333 0.00 0.00 0.00 1.40
511 548 5.616866 CGAATTTATAATCTTGCGCCCGATT 60.617 40.000 20.36 20.36 34.49 3.34
539 576 1.207339 CATCGAGCAACAGCGCAAA 59.793 52.632 11.47 0.00 0.00 3.68
541 578 2.187599 ATCGAGCAACAGCGCAAACC 62.188 55.000 11.47 0.00 0.00 3.27
558 595 3.864686 CGTGAAATCCAGCGGGCG 61.865 66.667 0.00 0.00 0.00 6.13
637 674 0.400975 TAAGCCCGCCACTTTTACCA 59.599 50.000 0.00 0.00 0.00 3.25
1035 1082 1.550130 CGAGGGAGGCAACCAAGGTA 61.550 60.000 0.00 0.00 37.17 3.08
1074 1121 4.066139 GGCTGGCCCCCATGTCTT 62.066 66.667 0.00 0.00 30.82 3.01
1075 1122 2.689691 GGCTGGCCCCCATGTCTTA 61.690 63.158 0.00 0.00 30.82 2.10
1078 1125 1.986882 CTGGCCCCCATGTCTTATTC 58.013 55.000 0.00 0.00 30.82 1.75
1079 1126 1.496429 CTGGCCCCCATGTCTTATTCT 59.504 52.381 0.00 0.00 30.82 2.40
1098 1145 6.759497 ATTCTGGTATGGTTTGTTAAGCTC 57.241 37.500 0.00 0.00 32.98 4.09
1150 1197 2.572095 TATGGAGGAAGGTGTGCGCG 62.572 60.000 0.00 0.00 0.00 6.86
1156 1203 3.575351 GAAGGTGTGCGCGGAGACT 62.575 63.158 25.94 8.65 0.00 3.24
1242 1289 1.001706 GAACCCCTCAGTTCGTTTTGC 60.002 52.381 0.00 0.00 37.04 3.68
1249 1296 3.976942 CCTCAGTTCGTTTTGCTGAATTG 59.023 43.478 0.00 0.00 38.58 2.32
1251 1298 3.066621 TCAGTTCGTTTTGCTGAATTGCT 59.933 39.130 0.00 0.00 36.46 3.91
1254 1302 4.504097 AGTTCGTTTTGCTGAATTGCTTTC 59.496 37.500 0.00 0.00 34.72 2.62
1255 1303 4.305989 TCGTTTTGCTGAATTGCTTTCT 57.694 36.364 0.00 0.00 35.23 2.52
1363 1412 2.186125 GACGGATCGTTCACCCCC 59.814 66.667 0.00 0.00 41.37 5.40
1397 1446 2.223805 GCACTTTTTGTTAGCCTGCTGT 60.224 45.455 0.97 0.00 0.00 4.40
1399 1448 3.798337 CACTTTTTGTTAGCCTGCTGTTG 59.202 43.478 0.97 0.00 0.00 3.33
1419 1468 7.499232 GCTGTTGATTCCTTTCTAGGCTAATAA 59.501 37.037 0.00 0.00 41.69 1.40
1434 1483 5.765182 AGGCTAATAATTGCTGCTAATTCGT 59.235 36.000 11.46 6.04 32.79 3.85
1458 1508 0.486879 TGGATTTGGAGGGCTGGTTT 59.513 50.000 0.00 0.00 0.00 3.27
1490 1540 7.361201 CGATGATGAGTTTGTAGTTGGTTGAAT 60.361 37.037 0.00 0.00 0.00 2.57
1543 1593 3.193479 CCAAAGGTGTTCTTAATCAGGCC 59.807 47.826 0.00 0.00 34.78 5.19
1666 1716 6.605594 ACAAAGTTGAGTCACTTATTTTGGGA 59.394 34.615 12.94 0.00 35.87 4.37
1668 1718 5.690865 AGTTGAGTCACTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
1678 1728 5.189934 ACTTATTTTGGGACAGAGGGAGTAG 59.810 44.000 0.00 0.00 42.39 2.57
2009 2552 8.950208 AGACTATTAAGAAACAGGAATAGCAC 57.050 34.615 0.00 0.00 35.98 4.40
2081 2624 4.551702 TGGCTAGCTTTGTGATCAAGTA 57.448 40.909 15.72 0.00 34.88 2.24
2629 3173 3.305744 CCAAAGACGTAAAAATGTGGGGG 60.306 47.826 0.00 0.00 0.00 5.40
2671 3217 2.618241 TCTTAGCAAGCAACCAACACAG 59.382 45.455 0.00 0.00 0.00 3.66
2687 3233 5.814705 CCAACACAGTTTGAAGGCAATTTAA 59.185 36.000 0.00 0.00 33.25 1.52
2746 3292 5.590104 TGATTGTGAAGATTGTGTACACG 57.410 39.130 20.61 0.00 34.72 4.49
2754 3300 4.465632 AGATTGTGTACACGATGGCTTA 57.534 40.909 29.50 3.92 35.64 3.09
2782 3328 4.981806 TGCTGTCCTATAAATTGTTGCC 57.018 40.909 0.00 0.00 0.00 4.52
2783 3329 4.339748 TGCTGTCCTATAAATTGTTGCCA 58.660 39.130 0.00 0.00 0.00 4.92
2797 3343 4.893424 TGTTGCCAGAACTTTCACTTAC 57.107 40.909 0.00 0.00 0.00 2.34
2822 3368 7.062138 ACTGCGTTTGCTATGTCAAAATTTATG 59.938 33.333 0.00 0.00 43.34 1.90
3143 3689 6.114221 TGCATTTTTAGTCGTAAGTATGGC 57.886 37.500 0.00 0.00 39.48 4.40
3189 3735 2.664402 ATATCCATGTCCCAACCAGC 57.336 50.000 0.00 0.00 0.00 4.85
3194 3740 0.677731 CATGTCCCAACCAGCGACAT 60.678 55.000 0.00 0.00 45.73 3.06
3364 3911 1.916697 GAGCTTTGCACGAAGGCCTC 61.917 60.000 5.23 0.00 37.36 4.70
3470 4017 6.265196 TGATCAACTGTAAGCCTTTCATTTGT 59.735 34.615 11.84 3.08 37.60 2.83
3508 4055 8.703604 TCTAAGTGGAAGTTTTATTGATCTCG 57.296 34.615 0.00 0.00 0.00 4.04
3511 4058 5.875359 AGTGGAAGTTTTATTGATCTCGGAC 59.125 40.000 0.00 0.00 0.00 4.79
3591 4138 7.978414 TCATCTCACATGATCTTTACTCTTGTC 59.022 37.037 0.00 0.00 30.99 3.18
3690 4238 1.388547 TTGATTTCGCATAGGTGGCC 58.611 50.000 0.00 0.00 0.00 5.36
3700 4248 1.467678 ATAGGTGGCCTGCTAGCTCG 61.468 60.000 17.23 6.77 36.65 5.03
3704 4252 1.680989 TGGCCTGCTAGCTCGTACA 60.681 57.895 17.23 5.97 0.00 2.90
3860 4408 3.631250 TGCTTGGTAGGATCAAATTCCC 58.369 45.455 0.00 0.00 36.35 3.97
3908 4456 0.804989 CATCTGCCTTCCGTTTGACC 59.195 55.000 0.00 0.00 0.00 4.02
4221 4773 7.313646 CGTTGATTCTACTGATCGGGTATTAT 58.686 38.462 6.47 0.66 0.00 1.28
4222 4774 8.456471 CGTTGATTCTACTGATCGGGTATTATA 58.544 37.037 6.47 0.00 0.00 0.98
4223 4775 9.570488 GTTGATTCTACTGATCGGGTATTATAC 57.430 37.037 6.47 0.00 0.00 1.47
4224 4776 9.529823 TTGATTCTACTGATCGGGTATTATACT 57.470 33.333 6.47 0.00 0.00 2.12
4289 4842 8.726988 TCACTACATTTGCAGTTAAAATACTCC 58.273 33.333 0.00 0.00 0.00 3.85
4290 4843 7.968405 CACTACATTTGCAGTTAAAATACTCCC 59.032 37.037 0.00 0.00 0.00 4.30
4291 4844 7.888546 ACTACATTTGCAGTTAAAATACTCCCT 59.111 33.333 0.00 0.00 0.00 4.20
4292 4845 7.158099 ACATTTGCAGTTAAAATACTCCCTC 57.842 36.000 0.00 0.00 0.00 4.30
4293 4846 6.152831 ACATTTGCAGTTAAAATACTCCCTCC 59.847 38.462 0.00 0.00 0.00 4.30
4294 4847 3.869065 TGCAGTTAAAATACTCCCTCCG 58.131 45.455 0.00 0.00 0.00 4.63
4295 4848 3.262405 TGCAGTTAAAATACTCCCTCCGT 59.738 43.478 0.00 0.00 0.00 4.69
4296 4849 4.259356 GCAGTTAAAATACTCCCTCCGTT 58.741 43.478 0.00 0.00 0.00 4.44
4297 4850 4.331992 GCAGTTAAAATACTCCCTCCGTTC 59.668 45.833 0.00 0.00 0.00 3.95
4298 4851 5.484715 CAGTTAAAATACTCCCTCCGTTCA 58.515 41.667 0.00 0.00 0.00 3.18
4299 4852 5.350640 CAGTTAAAATACTCCCTCCGTTCAC 59.649 44.000 0.00 0.00 0.00 3.18
4300 4853 5.247792 AGTTAAAATACTCCCTCCGTTCACT 59.752 40.000 0.00 0.00 0.00 3.41
4301 4854 4.635699 AAAATACTCCCTCCGTTCACTT 57.364 40.909 0.00 0.00 0.00 3.16
4302 4855 4.635699 AAATACTCCCTCCGTTCACTTT 57.364 40.909 0.00 0.00 0.00 2.66
4303 4856 4.635699 AATACTCCCTCCGTTCACTTTT 57.364 40.909 0.00 0.00 0.00 2.27
4304 4857 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
4305 4858 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
4306 4859 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
4307 4860 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
4308 4861 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
4309 4862 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
4310 4863 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
4311 4864 3.183775 CCTCCGTTCACTTTTGTAAGTCG 59.816 47.826 0.00 0.00 42.67 4.18
4312 4865 3.784338 TCCGTTCACTTTTGTAAGTCGT 58.216 40.909 0.00 0.00 42.67 4.34
4313 4866 4.183101 TCCGTTCACTTTTGTAAGTCGTT 58.817 39.130 0.00 0.00 42.67 3.85
4314 4867 4.630940 TCCGTTCACTTTTGTAAGTCGTTT 59.369 37.500 0.00 0.00 42.67 3.60
4315 4868 4.959757 CCGTTCACTTTTGTAAGTCGTTTC 59.040 41.667 0.00 0.00 42.67 2.78
4316 4869 5.446206 CCGTTCACTTTTGTAAGTCGTTTCA 60.446 40.000 0.00 0.00 42.67 2.69
4317 4870 5.671140 CGTTCACTTTTGTAAGTCGTTTCAG 59.329 40.000 0.00 0.00 42.67 3.02
4318 4871 6.454583 CGTTCACTTTTGTAAGTCGTTTCAGA 60.455 38.462 0.00 0.00 42.67 3.27
4319 4872 6.340537 TCACTTTTGTAAGTCGTTTCAGAC 57.659 37.500 0.00 0.00 42.67 3.51
4320 4873 5.870433 TCACTTTTGTAAGTCGTTTCAGACA 59.130 36.000 0.00 0.00 42.67 3.41
4321 4874 6.369340 TCACTTTTGTAAGTCGTTTCAGACAA 59.631 34.615 0.00 0.00 42.67 3.18
4322 4875 6.464834 CACTTTTGTAAGTCGTTTCAGACAAC 59.535 38.462 0.00 0.00 42.67 3.32
4323 4876 6.370718 ACTTTTGTAAGTCGTTTCAGACAACT 59.629 34.615 0.00 0.00 40.60 3.16
4324 4877 5.961395 TTGTAAGTCGTTTCAGACAACTC 57.039 39.130 0.00 0.00 43.24 3.01
4325 4878 5.001237 TGTAAGTCGTTTCAGACAACTCA 57.999 39.130 0.00 0.00 43.24 3.41
4326 4879 5.412640 TGTAAGTCGTTTCAGACAACTCAA 58.587 37.500 0.00 0.00 43.24 3.02
4327 4880 5.870433 TGTAAGTCGTTTCAGACAACTCAAA 59.130 36.000 0.00 0.00 43.24 2.69
4328 4881 5.873179 AAGTCGTTTCAGACAACTCAAAA 57.127 34.783 0.00 0.00 43.24 2.44
4329 4882 6.436843 AAGTCGTTTCAGACAACTCAAAAT 57.563 33.333 0.00 0.00 43.24 1.82
4330 4883 7.548196 AAGTCGTTTCAGACAACTCAAAATA 57.452 32.000 0.00 0.00 43.24 1.40
4331 4884 7.178712 AGTCGTTTCAGACAACTCAAAATAG 57.821 36.000 0.00 0.00 43.24 1.73
4332 4885 6.202954 AGTCGTTTCAGACAACTCAAAATAGG 59.797 38.462 0.00 0.00 43.24 2.57
4333 4886 5.049680 TCGTTTCAGACAACTCAAAATAGGC 60.050 40.000 0.00 0.00 0.00 3.93
4334 4887 5.049405 CGTTTCAGACAACTCAAAATAGGCT 60.049 40.000 0.00 0.00 0.00 4.58
4335 4888 5.947228 TTCAGACAACTCAAAATAGGCTG 57.053 39.130 0.00 0.00 0.00 4.85
4336 4889 4.973168 TCAGACAACTCAAAATAGGCTGT 58.027 39.130 0.00 0.00 0.00 4.40
4337 4890 5.376625 TCAGACAACTCAAAATAGGCTGTT 58.623 37.500 0.00 0.00 0.00 3.16
4338 4891 5.827797 TCAGACAACTCAAAATAGGCTGTTT 59.172 36.000 3.12 3.12 0.00 2.83
4339 4892 6.321181 TCAGACAACTCAAAATAGGCTGTTTT 59.679 34.615 15.20 15.20 0.00 2.43
4340 4893 6.418819 CAGACAACTCAAAATAGGCTGTTTTG 59.581 38.462 31.63 31.63 44.10 2.44
4341 4894 5.049828 ACAACTCAAAATAGGCTGTTTTGC 58.950 37.500 32.24 0.00 43.04 3.68
4342 4895 4.935352 ACTCAAAATAGGCTGTTTTGCA 57.065 36.364 32.24 23.09 43.04 4.08
4343 4896 4.620982 ACTCAAAATAGGCTGTTTTGCAC 58.379 39.130 32.24 0.00 43.04 4.57
4344 4897 4.099266 ACTCAAAATAGGCTGTTTTGCACA 59.901 37.500 32.24 20.43 43.04 4.57
4345 4898 5.212532 TCAAAATAGGCTGTTTTGCACAT 57.787 34.783 32.24 7.40 43.04 3.21
4346 4899 5.609423 TCAAAATAGGCTGTTTTGCACATT 58.391 33.333 32.24 6.77 43.04 2.71
4347 4900 5.466058 TCAAAATAGGCTGTTTTGCACATTG 59.534 36.000 32.24 16.60 43.04 2.82
4348 4901 4.605640 AATAGGCTGTTTTGCACATTGT 57.394 36.364 0.00 0.00 33.76 2.71
4349 4902 2.514205 AGGCTGTTTTGCACATTGTC 57.486 45.000 0.00 0.00 33.76 3.18
4350 4903 2.034124 AGGCTGTTTTGCACATTGTCT 58.966 42.857 0.00 0.00 33.76 3.41
4351 4904 2.129607 GGCTGTTTTGCACATTGTCTG 58.870 47.619 0.00 0.00 33.76 3.51
4352 4905 2.223782 GGCTGTTTTGCACATTGTCTGA 60.224 45.455 0.00 0.00 33.76 3.27
4353 4906 3.446799 GCTGTTTTGCACATTGTCTGAA 58.553 40.909 0.00 0.00 33.76 3.02
4354 4907 3.864583 GCTGTTTTGCACATTGTCTGAAA 59.135 39.130 0.00 0.00 33.76 2.69
4355 4908 4.508861 GCTGTTTTGCACATTGTCTGAAAT 59.491 37.500 0.00 0.00 33.76 2.17
4356 4909 5.557514 GCTGTTTTGCACATTGTCTGAAATG 60.558 40.000 0.00 9.50 42.21 2.32
4358 4911 5.519566 TGTTTTGCACATTGTCTGAAATGTC 59.480 36.000 12.25 9.51 45.47 3.06
4359 4912 5.518848 TTTGCACATTGTCTGAAATGTCT 57.481 34.783 12.25 0.00 45.47 3.41
4360 4913 5.518848 TTGCACATTGTCTGAAATGTCTT 57.481 34.783 12.25 0.00 45.47 3.01
4361 4914 5.112220 TGCACATTGTCTGAAATGTCTTC 57.888 39.130 12.25 7.82 45.47 2.87
4362 4915 4.579753 TGCACATTGTCTGAAATGTCTTCA 59.420 37.500 12.25 9.40 45.47 3.02
4363 4916 5.067544 TGCACATTGTCTGAAATGTCTTCAA 59.932 36.000 12.25 0.00 45.47 2.69
4364 4917 5.628193 GCACATTGTCTGAAATGTCTTCAAG 59.372 40.000 12.25 5.42 45.47 3.02
4365 4918 6.147581 CACATTGTCTGAAATGTCTTCAAGG 58.852 40.000 12.25 0.00 45.47 3.61
4366 4919 5.829924 ACATTGTCTGAAATGTCTTCAAGGT 59.170 36.000 10.41 0.00 45.47 3.50
4367 4920 6.016777 ACATTGTCTGAAATGTCTTCAAGGTC 60.017 38.462 10.41 0.00 45.47 3.85
4368 4921 5.296151 TGTCTGAAATGTCTTCAAGGTCT 57.704 39.130 0.00 0.00 0.00 3.85
4369 4922 5.684704 TGTCTGAAATGTCTTCAAGGTCTT 58.315 37.500 0.00 0.00 0.00 3.01
4370 4923 6.826668 TGTCTGAAATGTCTTCAAGGTCTTA 58.173 36.000 0.00 0.00 0.00 2.10
4371 4924 7.453393 TGTCTGAAATGTCTTCAAGGTCTTAT 58.547 34.615 0.00 0.00 0.00 1.73
4372 4925 8.593679 TGTCTGAAATGTCTTCAAGGTCTTATA 58.406 33.333 0.00 0.00 0.00 0.98
4373 4926 9.436957 GTCTGAAATGTCTTCAAGGTCTTATAA 57.563 33.333 0.00 0.00 0.00 0.98
4379 4932 9.793259 AATGTCTTCAAGGTCTTATAAAAGTGA 57.207 29.630 0.00 0.00 34.13 3.41
4380 4933 9.793259 ATGTCTTCAAGGTCTTATAAAAGTGAA 57.207 29.630 0.00 0.00 34.13 3.18
4381 4934 9.052759 TGTCTTCAAGGTCTTATAAAAGTGAAC 57.947 33.333 0.00 0.00 34.13 3.18
4382 4935 9.052759 GTCTTCAAGGTCTTATAAAAGTGAACA 57.947 33.333 0.00 0.00 34.13 3.18
4383 4936 9.273016 TCTTCAAGGTCTTATAAAAGTGAACAG 57.727 33.333 0.00 0.00 34.13 3.16
4384 4937 9.273016 CTTCAAGGTCTTATAAAAGTGAACAGA 57.727 33.333 0.00 0.00 34.13 3.41
4385 4938 8.833231 TCAAGGTCTTATAAAAGTGAACAGAG 57.167 34.615 0.00 0.00 34.13 3.35
4386 4939 7.878127 TCAAGGTCTTATAAAAGTGAACAGAGG 59.122 37.037 0.00 0.00 34.13 3.69
4387 4940 6.712276 AGGTCTTATAAAAGTGAACAGAGGG 58.288 40.000 0.00 0.00 34.13 4.30
4388 4941 6.500751 AGGTCTTATAAAAGTGAACAGAGGGA 59.499 38.462 0.00 0.00 34.13 4.20
4389 4942 6.819146 GGTCTTATAAAAGTGAACAGAGGGAG 59.181 42.308 0.00 0.00 34.13 4.30
4390 4943 7.387643 GTCTTATAAAAGTGAACAGAGGGAGT 58.612 38.462 0.00 0.00 34.13 3.85
4391 4944 8.529476 GTCTTATAAAAGTGAACAGAGGGAGTA 58.471 37.037 0.00 0.00 34.13 2.59
4392 4945 8.529476 TCTTATAAAAGTGAACAGAGGGAGTAC 58.471 37.037 0.00 0.00 34.13 2.73
4406 4959 7.344612 ACAGAGGGAGTACAACATATCATAACA 59.655 37.037 0.00 0.00 0.00 2.41
4409 4962 5.995897 GGGAGTACAACATATCATAACACCC 59.004 44.000 0.00 0.00 0.00 4.61
4443 4996 4.123497 TGGGAGTTAACAGATCATCGTG 57.877 45.455 8.61 0.00 0.00 4.35
4454 5007 4.449068 ACAGATCATCGTGTGTTGAAACTC 59.551 41.667 0.00 0.00 0.00 3.01
4464 5017 3.064271 TGTGTTGAAACTCCGTTTGTAGC 59.936 43.478 0.00 0.00 35.77 3.58
4520 5089 8.348285 TGTTTTCCTAATCTATGTTTTCCTGG 57.652 34.615 0.00 0.00 0.00 4.45
4521 5090 7.093945 TGTTTTCCTAATCTATGTTTTCCTGGC 60.094 37.037 0.00 0.00 0.00 4.85
4562 5131 0.248215 CGATGAACGGAAAGCATGGC 60.248 55.000 0.00 0.00 38.46 4.40
4594 5163 2.182791 CACGCTCTCTGATGCCGT 59.817 61.111 0.00 0.00 0.00 5.68
4595 5164 1.446792 CACGCTCTCTGATGCCGTT 60.447 57.895 0.00 0.00 0.00 4.44
4623 5194 2.812011 GGTACATGACCGACTGCTTTTT 59.188 45.455 0.00 0.00 38.87 1.94
4748 5319 1.630148 GCGCTGAAGTAGTGAACGAT 58.370 50.000 0.00 0.00 39.30 3.73
4761 5332 5.597813 AGTGAACGATGCTGTAAAAGAAG 57.402 39.130 0.00 0.00 0.00 2.85
4769 5340 2.041620 TGCTGTAAAAGAAGGGAGCCAT 59.958 45.455 0.00 0.00 0.00 4.40
4829 5401 3.252974 GGCCTATCCGATCATCGATTT 57.747 47.619 9.16 0.00 43.74 2.17
4833 5405 4.143030 GCCTATCCGATCATCGATTTTGTG 60.143 45.833 9.16 0.00 43.74 3.33
4871 5443 2.990479 GGGGATGCGAGGAACACT 59.010 61.111 0.00 0.00 0.00 3.55
4983 5555 1.541310 AATCTGCTCCGGTTGGTCGA 61.541 55.000 0.00 0.00 36.30 4.20
5015 5587 1.937546 GCGTGGCTCCTTTGAATGGG 61.938 60.000 0.00 0.00 0.00 4.00
5100 5678 4.451652 GCCGCTCGCTTGCTGTTC 62.452 66.667 0.00 0.00 0.00 3.18
5101 5679 3.793144 CCGCTCGCTTGCTGTTCC 61.793 66.667 0.00 0.00 0.00 3.62
5102 5680 4.139420 CGCTCGCTTGCTGTTCCG 62.139 66.667 0.00 0.00 0.00 4.30
5103 5681 4.451652 GCTCGCTTGCTGTTCCGC 62.452 66.667 0.00 0.00 0.00 5.54
5104 5682 2.740055 CTCGCTTGCTGTTCCGCT 60.740 61.111 0.00 0.00 0.00 5.52
5105 5683 2.734673 CTCGCTTGCTGTTCCGCTC 61.735 63.158 0.00 0.00 0.00 5.03
5106 5684 4.139420 CGCTTGCTGTTCCGCTCG 62.139 66.667 0.00 0.00 0.00 5.03
5107 5685 4.451652 GCTTGCTGTTCCGCTCGC 62.452 66.667 0.00 0.00 0.00 5.03
5108 5686 2.740055 CTTGCTGTTCCGCTCGCT 60.740 61.111 0.00 0.00 0.00 4.93
5130 5708 2.726633 GCTGTAAAGCAAAAACGCTCA 58.273 42.857 0.00 0.00 42.89 4.26
5209 5806 3.319198 AGCGGGTGGTGGACGATT 61.319 61.111 0.00 0.00 0.00 3.34
5212 5809 1.873165 CGGGTGGTGGACGATTTTG 59.127 57.895 0.00 0.00 0.00 2.44
5214 5811 0.538746 GGGTGGTGGACGATTTTGGT 60.539 55.000 0.00 0.00 0.00 3.67
5235 5832 6.062095 TGGTGTTTTGACCCTTTTTGAAAAA 58.938 32.000 2.83 2.83 34.79 1.94
5239 5836 7.480229 GTGTTTTGACCCTTTTTGAAAAATTCG 59.520 33.333 3.28 0.00 0.00 3.34
5249 5846 6.934048 TTTTGAAAAATTCGGCCAAATCTT 57.066 29.167 2.24 0.00 0.00 2.40
5252 5849 5.474825 TGAAAAATTCGGCCAAATCTTACC 58.525 37.500 2.24 0.00 0.00 2.85
5253 5850 5.245075 TGAAAAATTCGGCCAAATCTTACCT 59.755 36.000 2.24 0.00 0.00 3.08
5273 5870 9.981114 CTTACCTTGGTTCATAAAAATTTCAGT 57.019 29.630 0.00 0.00 0.00 3.41
5281 5878 9.788960 GGTTCATAAAAATTTCAGTATCTGACC 57.211 33.333 0.00 0.00 40.46 4.02
5292 5889 9.739276 ATTTCAGTATCTGACCAATTTTCTACA 57.261 29.630 0.00 0.00 40.46 2.74
5293 5890 8.777865 TTCAGTATCTGACCAATTTTCTACAG 57.222 34.615 0.00 0.00 40.46 2.74
5294 5891 7.907389 TCAGTATCTGACCAATTTTCTACAGT 58.093 34.615 0.00 0.00 35.39 3.55
5295 5892 8.035394 TCAGTATCTGACCAATTTTCTACAGTC 58.965 37.037 0.00 0.00 35.39 3.51
5296 5893 7.819415 CAGTATCTGACCAATTTTCTACAGTCA 59.181 37.037 0.00 0.00 32.44 3.41
5297 5894 8.543774 AGTATCTGACCAATTTTCTACAGTCAT 58.456 33.333 0.00 0.00 34.06 3.06
5298 5895 9.167311 GTATCTGACCAATTTTCTACAGTCATT 57.833 33.333 0.00 0.00 34.06 2.57
5299 5896 7.439157 TCTGACCAATTTTCTACAGTCATTG 57.561 36.000 0.00 0.00 34.06 2.82
5300 5897 6.430925 TCTGACCAATTTTCTACAGTCATTGG 59.569 38.462 7.53 7.53 46.42 3.16
5303 5900 6.824305 CCAATTTTCTACAGTCATTGGTCT 57.176 37.500 0.00 0.00 39.32 3.85
5304 5901 6.846350 CCAATTTTCTACAGTCATTGGTCTC 58.154 40.000 0.00 0.00 39.32 3.36
5305 5902 6.430925 CCAATTTTCTACAGTCATTGGTCTCA 59.569 38.462 0.00 0.00 39.32 3.27
5306 5903 7.040478 CCAATTTTCTACAGTCATTGGTCTCAA 60.040 37.037 0.00 0.00 39.32 3.02
5307 5904 8.517878 CAATTTTCTACAGTCATTGGTCTCAAT 58.482 33.333 0.00 0.00 43.79 2.57
5318 5915 4.689612 TTGGTCTCAATGATAGGGTAGC 57.310 45.455 0.00 0.00 0.00 3.58
5319 5916 3.653164 TGGTCTCAATGATAGGGTAGCA 58.347 45.455 0.00 0.00 0.00 3.49
5320 5917 3.388024 TGGTCTCAATGATAGGGTAGCAC 59.612 47.826 0.00 0.00 0.00 4.40
5321 5918 3.388024 GGTCTCAATGATAGGGTAGCACA 59.612 47.826 0.00 0.00 0.00 4.57
5322 5919 4.141711 GGTCTCAATGATAGGGTAGCACAA 60.142 45.833 0.00 0.00 0.00 3.33
5323 5920 4.811557 GTCTCAATGATAGGGTAGCACAAC 59.188 45.833 0.00 0.00 0.00 3.32
5324 5921 4.130118 CTCAATGATAGGGTAGCACAACC 58.870 47.826 0.00 0.00 38.94 3.77
5325 5922 3.780294 TCAATGATAGGGTAGCACAACCT 59.220 43.478 0.11 0.11 39.65 3.50
5326 5923 4.966168 TCAATGATAGGGTAGCACAACCTA 59.034 41.667 4.74 4.74 40.84 3.08
5327 5924 4.957684 ATGATAGGGTAGCACAACCTAC 57.042 45.455 4.38 1.13 39.50 3.18
5328 5925 3.990369 TGATAGGGTAGCACAACCTACT 58.010 45.455 4.38 0.00 39.50 2.57
5329 5926 3.704566 TGATAGGGTAGCACAACCTACTG 59.295 47.826 4.38 0.00 39.50 2.74
5330 5927 0.613777 AGGGTAGCACAACCTACTGC 59.386 55.000 0.00 0.00 39.65 4.40
5331 5928 0.392595 GGGTAGCACAACCTACTGCC 60.393 60.000 0.00 0.00 39.65 4.85
5332 5929 0.323629 GGTAGCACAACCTACTGCCA 59.676 55.000 0.00 0.00 38.18 4.92
5333 5930 1.676014 GGTAGCACAACCTACTGCCAG 60.676 57.143 0.00 0.00 38.18 4.85
5334 5931 0.613260 TAGCACAACCTACTGCCAGG 59.387 55.000 0.00 0.00 41.87 4.45
5335 5932 1.675641 GCACAACCTACTGCCAGGG 60.676 63.158 0.00 0.00 40.29 4.45
5336 5933 1.761174 CACAACCTACTGCCAGGGT 59.239 57.895 0.00 0.00 40.29 4.34
5337 5934 0.321653 CACAACCTACTGCCAGGGTC 60.322 60.000 0.00 0.00 40.29 4.46
5338 5935 0.473886 ACAACCTACTGCCAGGGTCT 60.474 55.000 0.00 0.00 40.29 3.85
5339 5936 0.693049 CAACCTACTGCCAGGGTCTT 59.307 55.000 0.00 0.00 40.29 3.01
5340 5937 1.073923 CAACCTACTGCCAGGGTCTTT 59.926 52.381 0.00 0.00 40.29 2.52
5341 5938 2.304761 CAACCTACTGCCAGGGTCTTTA 59.695 50.000 0.00 0.00 40.29 1.85
5342 5939 2.188817 ACCTACTGCCAGGGTCTTTAG 58.811 52.381 0.00 0.00 40.29 1.85
5343 5940 1.134371 CCTACTGCCAGGGTCTTTAGC 60.134 57.143 0.00 0.00 31.47 3.09
5344 5941 1.555075 CTACTGCCAGGGTCTTTAGCA 59.445 52.381 0.00 0.00 0.00 3.49
5345 5942 3.165606 CTGCCAGGGTCTTTAGCAG 57.834 57.895 0.00 0.00 44.31 4.24
5346 5943 0.326264 CTGCCAGGGTCTTTAGCAGT 59.674 55.000 2.22 0.00 44.59 4.40
5347 5944 1.555075 CTGCCAGGGTCTTTAGCAGTA 59.445 52.381 2.22 0.00 44.59 2.74
5348 5945 1.555075 TGCCAGGGTCTTTAGCAGTAG 59.445 52.381 0.00 0.00 0.00 2.57
5349 5946 1.134371 GCCAGGGTCTTTAGCAGTAGG 60.134 57.143 0.00 0.00 0.00 3.18
5350 5947 2.467880 CCAGGGTCTTTAGCAGTAGGA 58.532 52.381 0.00 0.00 0.00 2.94
5351 5948 2.168728 CCAGGGTCTTTAGCAGTAGGAC 59.831 54.545 0.00 0.00 0.00 3.85
5352 5949 3.100671 CAGGGTCTTTAGCAGTAGGACT 58.899 50.000 0.00 0.00 0.00 3.85
5353 5950 3.131400 CAGGGTCTTTAGCAGTAGGACTC 59.869 52.174 0.00 0.00 0.00 3.36
5354 5951 3.097614 GGGTCTTTAGCAGTAGGACTCA 58.902 50.000 0.00 0.00 0.00 3.41
5355 5952 3.119065 GGGTCTTTAGCAGTAGGACTCAC 60.119 52.174 0.00 0.00 0.00 3.51
5356 5953 3.764972 GGTCTTTAGCAGTAGGACTCACT 59.235 47.826 0.00 0.00 0.00 3.41
5357 5954 4.381079 GGTCTTTAGCAGTAGGACTCACTG 60.381 50.000 0.00 0.00 45.08 3.66
5358 5955 3.764434 TCTTTAGCAGTAGGACTCACTGG 59.236 47.826 4.79 0.00 42.99 4.00
5359 5956 1.475403 TAGCAGTAGGACTCACTGGC 58.525 55.000 4.79 0.00 42.99 4.85
5360 5957 0.542938 AGCAGTAGGACTCACTGGCA 60.543 55.000 4.79 0.00 42.99 4.92
5361 5958 0.390472 GCAGTAGGACTCACTGGCAC 60.390 60.000 4.79 0.00 42.99 5.01
5362 5959 0.247736 CAGTAGGACTCACTGGCACC 59.752 60.000 0.00 0.00 39.80 5.01
5363 5960 1.215647 GTAGGACTCACTGGCACCG 59.784 63.158 0.00 0.00 0.00 4.94
5364 5961 1.228769 TAGGACTCACTGGCACCGT 60.229 57.895 0.00 0.00 0.00 4.83
5365 5962 1.248785 TAGGACTCACTGGCACCGTC 61.249 60.000 0.00 0.00 0.00 4.79
5366 5963 2.734591 GACTCACTGGCACCGTCA 59.265 61.111 0.00 0.00 0.00 4.35
5367 5964 1.664965 GACTCACTGGCACCGTCAC 60.665 63.158 0.00 0.00 0.00 3.67
5368 5965 2.734723 CTCACTGGCACCGTCACG 60.735 66.667 0.00 0.00 0.00 4.35
5369 5966 3.207547 CTCACTGGCACCGTCACGA 62.208 63.158 0.00 0.00 0.00 4.35
5370 5967 2.048222 CACTGGCACCGTCACGAT 60.048 61.111 0.00 0.00 0.00 3.73
5371 5968 2.094659 CACTGGCACCGTCACGATC 61.095 63.158 0.00 0.00 0.00 3.69
5372 5969 2.261361 CTGGCACCGTCACGATCA 59.739 61.111 0.00 0.00 0.00 2.92
5373 5970 1.153568 CTGGCACCGTCACGATCAT 60.154 57.895 0.00 0.00 0.00 2.45
5374 5971 0.740868 CTGGCACCGTCACGATCATT 60.741 55.000 0.00 0.00 0.00 2.57
5375 5972 0.321210 TGGCACCGTCACGATCATTT 60.321 50.000 0.00 0.00 0.00 2.32
5376 5973 0.096976 GGCACCGTCACGATCATTTG 59.903 55.000 0.00 0.00 0.00 2.32
5377 5974 1.075542 GCACCGTCACGATCATTTGA 58.924 50.000 0.00 0.00 0.00 2.69
5378 5975 1.665679 GCACCGTCACGATCATTTGAT 59.334 47.619 0.00 0.00 37.51 2.57
5379 5976 2.537529 GCACCGTCACGATCATTTGATG 60.538 50.000 0.00 0.00 34.37 3.07
5380 5977 2.672874 CACCGTCACGATCATTTGATGT 59.327 45.455 0.00 0.00 34.37 3.06
5381 5978 2.672874 ACCGTCACGATCATTTGATGTG 59.327 45.455 0.00 7.16 36.17 3.21
5382 5979 2.929398 CCGTCACGATCATTTGATGTGA 59.071 45.455 0.00 15.55 38.73 3.58
5383 5980 3.370672 CCGTCACGATCATTTGATGTGAA 59.629 43.478 18.64 8.13 40.56 3.18
5384 5981 4.142924 CCGTCACGATCATTTGATGTGAAA 60.143 41.667 18.64 4.95 40.56 2.69
5385 5982 5.381477 CGTCACGATCATTTGATGTGAAAA 58.619 37.500 18.64 4.49 40.56 2.29
5386 5983 5.850653 CGTCACGATCATTTGATGTGAAAAA 59.149 36.000 18.64 4.25 40.56 1.94
5387 5984 6.031729 CGTCACGATCATTTGATGTGAAAAAG 59.968 38.462 18.64 11.61 40.56 2.27
5388 5985 7.077605 GTCACGATCATTTGATGTGAAAAAGA 58.922 34.615 18.64 3.56 40.56 2.52
5389 5986 7.059945 GTCACGATCATTTGATGTGAAAAAGAC 59.940 37.037 18.64 9.11 40.56 3.01
5390 5987 6.857451 CACGATCATTTGATGTGAAAAAGACA 59.143 34.615 13.33 0.00 36.54 3.41
5391 5988 6.857964 ACGATCATTTGATGTGAAAAAGACAC 59.142 34.615 0.00 0.00 38.55 3.67
5392 5989 7.080099 CGATCATTTGATGTGAAAAAGACACT 58.920 34.615 0.00 0.00 38.81 3.55
5393 5990 8.229811 CGATCATTTGATGTGAAAAAGACACTA 58.770 33.333 0.00 0.00 38.81 2.74
5394 5991 9.897744 GATCATTTGATGTGAAAAAGACACTAA 57.102 29.630 0.00 0.00 38.81 2.24
5396 5993 9.681692 TCATTTGATGTGAAAAAGACACTAATG 57.318 29.630 0.00 0.00 38.81 1.90
5397 5994 8.918658 CATTTGATGTGAAAAAGACACTAATGG 58.081 33.333 0.00 0.00 38.81 3.16
5398 5995 7.815840 TTGATGTGAAAAAGACACTAATGGA 57.184 32.000 0.00 0.00 38.81 3.41
5399 5996 8.408043 TTGATGTGAAAAAGACACTAATGGAT 57.592 30.769 0.00 0.00 38.81 3.41
5400 5997 8.408043 TGATGTGAAAAAGACACTAATGGATT 57.592 30.769 0.00 0.00 38.81 3.01
5401 5998 9.513906 TGATGTGAAAAAGACACTAATGGATTA 57.486 29.630 0.00 0.00 38.81 1.75
5409 6006 6.699575 AGACACTAATGGATTAATTGGTGC 57.300 37.500 11.78 6.55 46.96 5.01
5410 6007 6.186957 AGACACTAATGGATTAATTGGTGCA 58.813 36.000 11.78 0.00 46.96 4.57
5411 6008 6.835488 AGACACTAATGGATTAATTGGTGCAT 59.165 34.615 11.78 0.96 46.96 3.96
5412 6009 6.808829 ACACTAATGGATTAATTGGTGCATG 58.191 36.000 11.78 0.00 46.96 4.06
5413 6010 5.693104 CACTAATGGATTAATTGGTGCATGC 59.307 40.000 11.82 11.82 40.61 4.06
5414 6011 4.757019 AATGGATTAATTGGTGCATGCA 57.243 36.364 18.46 18.46 0.00 3.96
5415 6012 4.967084 ATGGATTAATTGGTGCATGCAT 57.033 36.364 25.64 10.06 0.00 3.96
5416 6013 4.061357 TGGATTAATTGGTGCATGCATG 57.939 40.909 25.64 22.70 0.00 4.06
5417 6014 3.181464 TGGATTAATTGGTGCATGCATGG 60.181 43.478 25.64 10.03 0.00 3.66
5418 6015 3.069872 GGATTAATTGGTGCATGCATGGA 59.930 43.478 25.64 22.97 0.00 3.41
5419 6016 4.262721 GGATTAATTGGTGCATGCATGGAT 60.263 41.667 25.64 14.53 0.00 3.41
5420 6017 2.613026 AATTGGTGCATGCATGGATG 57.387 45.000 25.64 21.79 0.00 3.51
5421 6018 1.491668 ATTGGTGCATGCATGGATGT 58.508 45.000 25.64 9.84 0.00 3.06
5422 6019 1.268066 TTGGTGCATGCATGGATGTT 58.732 45.000 25.64 0.00 0.00 2.71
5423 6020 0.533032 TGGTGCATGCATGGATGTTG 59.467 50.000 25.64 5.52 0.00 3.33
5424 6021 0.808453 GGTGCATGCATGGATGTTGC 60.808 55.000 25.64 15.56 40.55 4.17
5428 6025 3.290567 TGCATGGATGTTGCAGGC 58.709 55.556 0.00 0.00 45.61 4.85
5429 6026 2.352821 TGCATGGATGTTGCAGGCC 61.353 57.895 0.00 0.00 44.80 5.19
5430 6027 2.352821 GCATGGATGTTGCAGGCCA 61.353 57.895 5.01 0.00 39.58 5.36
5431 6028 1.890625 GCATGGATGTTGCAGGCCAA 61.891 55.000 5.01 0.00 39.58 4.52
5439 6036 2.280835 TTGCAGGCCAACAACAACA 58.719 47.368 5.01 0.00 0.00 3.33
5440 6037 0.610174 TTGCAGGCCAACAACAACAA 59.390 45.000 5.01 0.00 0.00 2.83
5441 6038 0.610174 TGCAGGCCAACAACAACAAA 59.390 45.000 5.01 0.00 0.00 2.83
5442 6039 1.002430 TGCAGGCCAACAACAACAAAA 59.998 42.857 5.01 0.00 0.00 2.44
5443 6040 2.079925 GCAGGCCAACAACAACAAAAA 58.920 42.857 5.01 0.00 0.00 1.94
5444 6041 2.159585 GCAGGCCAACAACAACAAAAAC 60.160 45.455 5.01 0.00 0.00 2.43
5445 6042 3.070018 CAGGCCAACAACAACAAAAACA 58.930 40.909 5.01 0.00 0.00 2.83
5446 6043 3.499918 CAGGCCAACAACAACAAAAACAA 59.500 39.130 5.01 0.00 0.00 2.83
5447 6044 4.023707 CAGGCCAACAACAACAAAAACAAA 60.024 37.500 5.01 0.00 0.00 2.83
5448 6045 4.580580 AGGCCAACAACAACAAAAACAAAA 59.419 33.333 5.01 0.00 0.00 2.44
5449 6046 5.067805 AGGCCAACAACAACAAAAACAAAAA 59.932 32.000 5.01 0.00 0.00 1.94
5450 6047 5.174035 GGCCAACAACAACAAAAACAAAAAC 59.826 36.000 0.00 0.00 0.00 2.43
5451 6048 5.743872 GCCAACAACAACAAAAACAAAAACA 59.256 32.000 0.00 0.00 0.00 2.83
5452 6049 6.253512 GCCAACAACAACAAAAACAAAAACAA 59.746 30.769 0.00 0.00 0.00 2.83
5453 6050 7.201435 GCCAACAACAACAAAAACAAAAACAAA 60.201 29.630 0.00 0.00 0.00 2.83
5454 6051 8.647226 CCAACAACAACAAAAACAAAAACAAAA 58.353 25.926 0.00 0.00 0.00 2.44
5457 6054 8.323854 ACAACAACAAAAACAAAAACAAAATGC 58.676 25.926 0.00 0.00 0.00 3.56
5458 6055 8.538039 CAACAACAAAAACAAAAACAAAATGCT 58.462 25.926 0.00 0.00 0.00 3.79
5459 6056 9.736023 AACAACAAAAACAAAAACAAAATGCTA 57.264 22.222 0.00 0.00 0.00 3.49
5460 6057 9.736023 ACAACAAAAACAAAAACAAAATGCTAA 57.264 22.222 0.00 0.00 0.00 3.09
5463 6060 9.824534 ACAAAAACAAAAACAAAATGCTAAGAG 57.175 25.926 0.00 0.00 0.00 2.85
5464 6061 8.787884 CAAAAACAAAAACAAAATGCTAAGAGC 58.212 29.630 0.00 0.00 42.82 4.09
5478 6075 2.659897 GAGCATCTACAGCCGGCG 60.660 66.667 23.20 18.60 0.00 6.46
5479 6076 4.899239 AGCATCTACAGCCGGCGC 62.899 66.667 23.20 16.75 0.00 6.53
5494 6091 4.794648 CGCCCCAAATCGGCCTCA 62.795 66.667 0.00 0.00 43.98 3.86
5495 6092 2.362375 GCCCCAAATCGGCCTCAA 60.362 61.111 0.00 0.00 40.78 3.02
5496 6093 1.981853 GCCCCAAATCGGCCTCAAA 60.982 57.895 0.00 0.00 40.78 2.69
5497 6094 1.890174 CCCCAAATCGGCCTCAAAC 59.110 57.895 0.00 0.00 0.00 2.93
5498 6095 1.506262 CCCAAATCGGCCTCAAACG 59.494 57.895 0.00 0.00 0.00 3.60
5499 6096 1.154035 CCAAATCGGCCTCAAACGC 60.154 57.895 0.00 0.00 0.00 4.84
5500 6097 1.154035 CAAATCGGCCTCAAACGCC 60.154 57.895 0.00 0.00 43.38 5.68
5501 6098 2.340328 AAATCGGCCTCAAACGCCC 61.340 57.895 0.00 0.00 43.98 6.13
5507 6104 3.726517 CCTCAAACGCCCGTGCAG 61.727 66.667 0.00 0.00 37.32 4.41
5508 6105 4.389576 CTCAAACGCCCGTGCAGC 62.390 66.667 0.00 0.00 37.32 5.25
5517 6114 4.155733 CCGTGCAGCCCGTCCATA 62.156 66.667 0.00 0.00 0.00 2.74
5518 6115 2.586079 CGTGCAGCCCGTCCATAG 60.586 66.667 0.00 0.00 0.00 2.23
5519 6116 2.897350 GTGCAGCCCGTCCATAGC 60.897 66.667 0.00 0.00 0.00 2.97
5520 6117 3.083349 TGCAGCCCGTCCATAGCT 61.083 61.111 0.00 0.00 37.32 3.32
5523 6120 3.866582 AGCCCGTCCATAGCTGGC 61.867 66.667 0.00 0.00 42.80 4.85
5524 6121 4.937431 GCCCGTCCATAGCTGGCC 62.937 72.222 0.00 0.00 42.80 5.36
5525 6122 4.609018 CCCGTCCATAGCTGGCCG 62.609 72.222 0.00 0.00 43.42 6.13
5527 6124 3.849951 CGTCCATAGCTGGCCGGT 61.850 66.667 14.55 8.99 40.17 5.28
5528 6125 2.109181 GTCCATAGCTGGCCGGTC 59.891 66.667 14.55 0.00 42.80 4.79
5529 6126 2.364973 TCCATAGCTGGCCGGTCA 60.365 61.111 9.26 9.26 42.80 4.02
5530 6127 2.203070 CCATAGCTGGCCGGTCAC 60.203 66.667 14.55 1.91 35.23 3.67
5531 6128 2.586079 CATAGCTGGCCGGTCACG 60.586 66.667 14.55 2.32 40.55 4.35
5532 6129 2.758327 ATAGCTGGCCGGTCACGA 60.758 61.111 14.55 0.00 44.60 4.35
5533 6130 2.355986 ATAGCTGGCCGGTCACGAA 61.356 57.895 14.55 0.00 44.60 3.85
5534 6131 1.895020 ATAGCTGGCCGGTCACGAAA 61.895 55.000 14.55 0.00 44.60 3.46
5535 6132 2.102109 TAGCTGGCCGGTCACGAAAA 62.102 55.000 14.55 0.00 44.60 2.29
5536 6133 2.332654 GCTGGCCGGTCACGAAAAT 61.333 57.895 14.55 0.00 44.60 1.82
5537 6134 1.794222 CTGGCCGGTCACGAAAATC 59.206 57.895 3.51 0.00 44.60 2.17
5538 6135 0.673644 CTGGCCGGTCACGAAAATCT 60.674 55.000 3.51 0.00 44.60 2.40
5539 6136 0.953471 TGGCCGGTCACGAAAATCTG 60.953 55.000 3.51 0.00 44.60 2.90
5540 6137 0.672401 GGCCGGTCACGAAAATCTGA 60.672 55.000 0.00 0.00 44.60 3.27
5541 6138 0.442699 GCCGGTCACGAAAATCTGAC 59.557 55.000 1.90 0.00 44.60 3.51
5546 6143 3.040147 GTCACGAAAATCTGACCCAGA 57.960 47.619 0.00 0.00 44.99 3.86
5547 6144 2.996621 GTCACGAAAATCTGACCCAGAG 59.003 50.000 2.99 0.00 44.08 3.35
5548 6145 2.028112 TCACGAAAATCTGACCCAGAGG 60.028 50.000 2.99 0.00 44.08 3.69
5559 6156 2.935481 CCAGAGGGGTGCCTCCAA 60.935 66.667 0.00 0.00 37.53 3.53
5560 6157 2.352805 CAGAGGGGTGCCTCCAAC 59.647 66.667 0.00 0.00 37.53 3.77
5561 6158 3.322466 AGAGGGGTGCCTCCAACG 61.322 66.667 0.00 0.00 37.53 4.10
5562 6159 4.410400 GAGGGGTGCCTCCAACGG 62.410 72.222 0.00 0.00 38.11 4.44
5570 6167 4.413928 CCTCCAACGGGCATCAAA 57.586 55.556 0.00 0.00 0.00 2.69
5571 6168 2.886382 CCTCCAACGGGCATCAAAT 58.114 52.632 0.00 0.00 0.00 2.32
5572 6169 0.457035 CCTCCAACGGGCATCAAATG 59.543 55.000 0.00 0.00 0.00 2.32
5581 6178 3.122850 CATCAAATGCCCGGGCTC 58.877 61.111 43.34 19.44 42.51 4.70
5582 6179 1.753848 CATCAAATGCCCGGGCTCA 60.754 57.895 43.34 27.61 42.51 4.26
5583 6180 1.754234 ATCAAATGCCCGGGCTCAC 60.754 57.895 43.34 18.22 42.51 3.51
5584 6181 2.215451 ATCAAATGCCCGGGCTCACT 62.215 55.000 43.34 23.73 42.51 3.41
5585 6182 2.361610 AAATGCCCGGGCTCACTG 60.362 61.111 43.34 7.20 42.51 3.66
5586 6183 3.944250 AAATGCCCGGGCTCACTGG 62.944 63.158 43.34 6.35 45.92 4.00
5594 6191 4.416738 GGCTCACTGGCACCCCTC 62.417 72.222 0.00 0.00 41.37 4.30
5595 6192 3.640407 GCTCACTGGCACCCCTCA 61.640 66.667 0.00 0.00 0.00 3.86
5596 6193 2.348998 CTCACTGGCACCCCTCAC 59.651 66.667 0.00 0.00 0.00 3.51
5597 6194 2.447572 TCACTGGCACCCCTCACA 60.448 61.111 0.00 0.00 0.00 3.58
5598 6195 1.845627 CTCACTGGCACCCCTCACAT 61.846 60.000 0.00 0.00 0.00 3.21
5599 6196 0.546507 TCACTGGCACCCCTCACATA 60.547 55.000 0.00 0.00 0.00 2.29
5600 6197 0.392998 CACTGGCACCCCTCACATAC 60.393 60.000 0.00 0.00 0.00 2.39
5601 6198 0.840288 ACTGGCACCCCTCACATACA 60.840 55.000 0.00 0.00 0.00 2.29
5602 6199 0.107508 CTGGCACCCCTCACATACAG 60.108 60.000 0.00 0.00 0.00 2.74
5603 6200 1.452108 GGCACCCCTCACATACAGC 60.452 63.158 0.00 0.00 0.00 4.40
5604 6201 1.452108 GCACCCCTCACATACAGCC 60.452 63.158 0.00 0.00 0.00 4.85
5605 6202 1.224592 CACCCCTCACATACAGCCC 59.775 63.158 0.00 0.00 0.00 5.19
5606 6203 1.229820 ACCCCTCACATACAGCCCA 60.230 57.895 0.00 0.00 0.00 5.36
5607 6204 0.844661 ACCCCTCACATACAGCCCAA 60.845 55.000 0.00 0.00 0.00 4.12
5608 6205 0.331278 CCCCTCACATACAGCCCAAA 59.669 55.000 0.00 0.00 0.00 3.28
5609 6206 1.063717 CCCCTCACATACAGCCCAAAT 60.064 52.381 0.00 0.00 0.00 2.32
5610 6207 2.174639 CCCCTCACATACAGCCCAAATA 59.825 50.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 5.120399 CAAATTGATGGCCACTAATGCAAT 58.880 37.500 8.16 8.67 0.00 3.56
76 77 4.568359 GCTCTCTCATGCAAAATAGAACGA 59.432 41.667 0.00 0.00 0.00 3.85
79 80 4.507710 ACGCTCTCTCATGCAAAATAGAA 58.492 39.130 0.00 0.00 0.00 2.10
83 97 3.620374 CACTACGCTCTCTCATGCAAAAT 59.380 43.478 0.00 0.00 0.00 1.82
92 106 1.091537 ACTGCTCACTACGCTCTCTC 58.908 55.000 0.00 0.00 0.00 3.20
93 107 2.404923 TACTGCTCACTACGCTCTCT 57.595 50.000 0.00 0.00 0.00 3.10
121 136 8.928733 TGCTGAAATATTTCTGAAATTGAAAGC 58.071 29.630 29.05 22.58 38.07 3.51
128 143 7.329226 CGGTTGTTGCTGAAATATTTCTGAAAT 59.671 33.333 29.05 18.64 36.47 2.17
132 147 5.698832 TCGGTTGTTGCTGAAATATTTCTG 58.301 37.500 24.77 24.13 38.02 3.02
167 183 7.018826 CGAGATGCAAACCGAATTAACTTAAA 58.981 34.615 0.00 0.00 0.00 1.52
170 186 4.142687 CCGAGATGCAAACCGAATTAACTT 60.143 41.667 0.00 0.00 0.00 2.66
176 192 1.376609 GGCCGAGATGCAAACCGAAT 61.377 55.000 0.00 0.00 0.00 3.34
189 205 1.000385 TGTTTCAGCATTTTGGCCGAG 60.000 47.619 0.00 0.00 0.00 4.63
293 310 4.466827 ACCTTTCGGTTAAAATGTCAGGT 58.533 39.130 0.00 0.00 42.13 4.00
340 358 8.956533 TGTGAGATTATGATAAAATTCACCGA 57.043 30.769 16.98 4.90 34.36 4.69
365 383 8.947055 ATTACAAGTGTTTGCTTTCATTTTCT 57.053 26.923 0.00 0.00 37.85 2.52
428 464 5.410067 TCTGTTTACGAAAGGGGTATTACG 58.590 41.667 0.00 0.00 0.00 3.18
434 471 7.066645 GCTTTTATATCTGTTTACGAAAGGGGT 59.933 37.037 0.00 0.00 0.00 4.95
448 485 9.221775 GTGGTGATTTAAACGCTTTTATATCTG 57.778 33.333 19.47 0.00 36.93 2.90
450 487 9.783256 AAGTGGTGATTTAAACGCTTTTATATC 57.217 29.630 14.93 14.93 36.72 1.63
457 494 6.870971 TCTAAAGTGGTGATTTAAACGCTT 57.129 33.333 0.00 0.00 35.40 4.68
460 497 9.490663 GATTCATCTAAAGTGGTGATTTAAACG 57.509 33.333 0.00 0.00 0.00 3.60
483 520 5.335661 GGGCGCAAGATTATAAATTCGGATT 60.336 40.000 10.83 0.00 43.02 3.01
487 524 3.185594 TCGGGCGCAAGATTATAAATTCG 59.814 43.478 10.83 0.00 43.02 3.34
495 532 1.508632 GCTAATCGGGCGCAAGATTA 58.491 50.000 25.04 25.04 38.04 1.75
511 548 1.600511 TTGCTCGATGTGTCCGGCTA 61.601 55.000 0.00 0.00 0.00 3.93
523 560 2.631428 GTTTGCGCTGTTGCTCGA 59.369 55.556 9.73 0.00 36.97 4.04
539 576 2.046314 CCCGCTGGATTTCACGGT 60.046 61.111 0.00 0.00 44.14 4.83
541 578 3.864686 CGCCCGCTGGATTTCACG 61.865 66.667 0.00 0.00 0.00 4.35
558 595 2.521996 CCGCGTTAATTTTTAGGCACC 58.478 47.619 4.92 0.00 0.00 5.01
637 674 2.596338 CGGGGAAGTGGGCGTTTT 60.596 61.111 0.00 0.00 0.00 2.43
1003 1050 0.742505 TCCCTCGCGATGTAAATCGT 59.257 50.000 16.46 0.00 45.11 3.73
1018 1065 0.919710 GATACCTTGGTTGCCTCCCT 59.080 55.000 0.00 0.00 0.00 4.20
1070 1117 8.182227 GCTTAACAAACCATACCAGAATAAGAC 58.818 37.037 0.00 0.00 0.00 3.01
1074 1121 7.630082 AGAGCTTAACAAACCATACCAGAATA 58.370 34.615 0.00 0.00 0.00 1.75
1075 1122 6.485171 AGAGCTTAACAAACCATACCAGAAT 58.515 36.000 0.00 0.00 0.00 2.40
1078 1125 6.575162 AAAGAGCTTAACAAACCATACCAG 57.425 37.500 0.00 0.00 0.00 4.00
1079 1126 6.969993 AAAAGAGCTTAACAAACCATACCA 57.030 33.333 0.00 0.00 0.00 3.25
1105 1152 1.573108 AGAGGCCAATCGGAGAGAAA 58.427 50.000 5.01 0.00 43.63 2.52
1119 1166 0.534652 CCTCCATAGCTGCAAGAGGC 60.535 60.000 12.29 0.00 37.88 4.70
1150 1197 1.216710 CAGCTCCACCGAAGTCTCC 59.783 63.158 0.00 0.00 0.00 3.71
1242 1289 2.095567 CACACGGGAGAAAGCAATTCAG 60.096 50.000 0.00 0.00 40.72 3.02
1249 1296 3.858247 ACTTATACACACGGGAGAAAGC 58.142 45.455 0.00 0.00 0.00 3.51
1251 1298 6.604396 TCTGATACTTATACACACGGGAGAAA 59.396 38.462 0.00 0.00 0.00 2.52
1254 1302 5.278364 GGTCTGATACTTATACACACGGGAG 60.278 48.000 0.00 0.00 0.00 4.30
1255 1303 4.581824 GGTCTGATACTTATACACACGGGA 59.418 45.833 0.00 0.00 0.00 5.14
1419 1468 3.366273 CCAACACACGAATTAGCAGCAAT 60.366 43.478 0.00 0.00 0.00 3.56
1434 1483 0.482446 AGCCCTCCAAATCCAACACA 59.518 50.000 0.00 0.00 0.00 3.72
1458 1508 3.961480 ACAAACTCATCATCGGAGTCA 57.039 42.857 0.00 0.00 44.50 3.41
1515 1565 1.757682 AAGAACACCTTTGGCACGAA 58.242 45.000 0.00 0.00 0.00 3.85
1666 1716 1.958288 ATGCAACCTACTCCCTCTGT 58.042 50.000 0.00 0.00 0.00 3.41
1668 1718 2.839228 AGAATGCAACCTACTCCCTCT 58.161 47.619 0.00 0.00 0.00 3.69
1678 1728 1.448985 TTCGCACCTAGAATGCAACC 58.551 50.000 16.31 0.00 43.57 3.77
1867 2408 3.117701 TCTCCAGATCAAAACACCCACAA 60.118 43.478 0.00 0.00 0.00 3.33
1985 2526 7.769044 TGGTGCTATTCCTGTTTCTTAATAGTC 59.231 37.037 0.00 0.00 35.36 2.59
2009 2552 0.031314 CGAGATCCTGTCGTCCATGG 59.969 60.000 4.97 4.97 32.62 3.66
2485 3029 5.166398 CCAACAGAAATGAAAGGAAGATGC 58.834 41.667 0.00 0.00 0.00 3.91
2629 3173 2.956333 ACTAGCTGGTGGTTGTTTTTCC 59.044 45.455 0.13 0.00 0.00 3.13
2630 3174 3.883489 AGACTAGCTGGTGGTTGTTTTTC 59.117 43.478 7.76 0.00 30.60 2.29
2671 3217 9.567848 TTATTCTCGATTAAATTGCCTTCAAAC 57.432 29.630 0.00 0.00 35.56 2.93
2687 3233 9.265901 CCATCACTTGTTCTATTTATTCTCGAT 57.734 33.333 0.00 0.00 0.00 3.59
2743 3289 1.258982 GCAATCGACTAAGCCATCGTG 59.741 52.381 0.00 0.00 39.38 4.35
2746 3292 2.541762 GACAGCAATCGACTAAGCCATC 59.458 50.000 0.00 0.00 0.00 3.51
2754 3300 6.349300 ACAATTTATAGGACAGCAATCGACT 58.651 36.000 0.00 0.00 0.00 4.18
2782 3328 4.795970 AACGCAGTAAGTGAAAGTTCTG 57.204 40.909 0.00 0.00 45.00 3.02
2783 3329 4.495844 GCAAACGCAGTAAGTGAAAGTTCT 60.496 41.667 0.00 0.00 45.00 3.01
2797 3343 5.827568 AAATTTTGACATAGCAAACGCAG 57.172 34.783 0.00 0.00 37.48 5.18
2822 3368 5.841957 ATATCACCCAGAAAAGCATTGTC 57.158 39.130 0.00 0.00 0.00 3.18
2825 3371 6.610075 ACAAATATCACCCAGAAAAGCATT 57.390 33.333 0.00 0.00 0.00 3.56
2834 3380 7.825681 TGTTGAACATAACAAATATCACCCAG 58.174 34.615 0.00 0.00 37.60 4.45
2884 3430 7.878477 AAGAAGTATATTTGACGAACGTGAA 57.122 32.000 4.19 0.00 0.00 3.18
2888 3434 7.063074 ACCAGAAAGAAGTATATTTGACGAACG 59.937 37.037 0.00 0.00 0.00 3.95
3143 3689 9.838339 AATTATGGAAGTTATGAGTTAGGACAG 57.162 33.333 0.00 0.00 0.00 3.51
3189 3735 1.740025 GCCTGGAGGAGAAAAATGTCG 59.260 52.381 0.00 0.00 37.39 4.35
3194 3740 2.174639 TGTGAAGCCTGGAGGAGAAAAA 59.825 45.455 0.00 0.00 37.39 1.94
3364 3911 7.951530 AAAAGCAAAGTAAATGGATTCAGTG 57.048 32.000 0.00 0.00 0.00 3.66
3470 4017 3.456644 TCCACTTAGAACACTCAACCCAA 59.543 43.478 0.00 0.00 0.00 4.12
3508 4055 3.619038 CGAGGAACTGCAAAGAATAGTCC 59.381 47.826 0.00 0.00 41.55 3.85
3511 4058 3.372206 CCACGAGGAACTGCAAAGAATAG 59.628 47.826 0.00 0.00 41.55 1.73
3591 4138 8.717821 CCATATTTATGGTATGTACGGACAAAG 58.282 37.037 3.58 0.00 46.42 2.77
3690 4238 2.356069 TGATCAGTGTACGAGCTAGCAG 59.644 50.000 18.83 13.00 0.00 4.24
3700 4248 5.255710 ACTAGAGCATGTGATCAGTGTAC 57.744 43.478 0.00 0.00 31.88 2.90
3704 4252 8.093307 CCAATTATACTAGAGCATGTGATCAGT 58.907 37.037 0.00 5.17 31.88 3.41
3892 4440 0.673644 ATCGGTCAAACGGAAGGCAG 60.674 55.000 0.00 0.00 31.18 4.85
3908 4456 0.535328 TACCTGCGGAGAGAGGATCG 60.535 60.000 5.10 0.00 42.67 3.69
4221 4773 4.393834 TGTGCACATCAAAAGCCTAAGTA 58.606 39.130 17.42 0.00 0.00 2.24
4222 4774 3.221771 TGTGCACATCAAAAGCCTAAGT 58.778 40.909 17.42 0.00 0.00 2.24
4223 4775 3.921119 TGTGCACATCAAAAGCCTAAG 57.079 42.857 17.42 0.00 0.00 2.18
4224 4776 4.280425 TCAATGTGCACATCAAAAGCCTAA 59.720 37.500 31.45 0.00 35.10 2.69
4287 4840 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
4288 4841 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
4289 4842 3.183775 CGACTTACAAAAGTGAACGGAGG 59.816 47.826 0.00 0.00 46.09 4.30
4290 4843 3.800506 ACGACTTACAAAAGTGAACGGAG 59.199 43.478 0.00 0.00 46.09 4.63
4291 4844 3.784338 ACGACTTACAAAAGTGAACGGA 58.216 40.909 0.00 0.00 46.09 4.69
4292 4845 4.525411 AACGACTTACAAAAGTGAACGG 57.475 40.909 0.00 0.00 46.09 4.44
4293 4846 5.552807 TGAAACGACTTACAAAAGTGAACG 58.447 37.500 0.00 0.00 46.09 3.95
4294 4847 6.681599 GTCTGAAACGACTTACAAAAGTGAAC 59.318 38.462 0.00 0.00 46.09 3.18
4295 4848 6.369340 TGTCTGAAACGACTTACAAAAGTGAA 59.631 34.615 0.00 0.00 46.09 3.18
4296 4849 5.870433 TGTCTGAAACGACTTACAAAAGTGA 59.130 36.000 0.00 0.00 46.09 3.41
4297 4850 6.102006 TGTCTGAAACGACTTACAAAAGTG 57.898 37.500 0.00 0.00 46.09 3.16
4308 4861 6.363473 CCTATTTTGAGTTGTCTGAAACGAC 58.637 40.000 0.00 0.00 41.93 4.34
4309 4862 5.049680 GCCTATTTTGAGTTGTCTGAAACGA 60.050 40.000 0.00 0.00 35.13 3.85
4310 4863 5.049405 AGCCTATTTTGAGTTGTCTGAAACG 60.049 40.000 0.00 0.00 35.13 3.60
4311 4864 6.145535 CAGCCTATTTTGAGTTGTCTGAAAC 58.854 40.000 0.00 0.00 0.00 2.78
4312 4865 5.827797 ACAGCCTATTTTGAGTTGTCTGAAA 59.172 36.000 0.00 0.00 0.00 2.69
4313 4866 5.376625 ACAGCCTATTTTGAGTTGTCTGAA 58.623 37.500 0.00 0.00 0.00 3.02
4314 4867 4.973168 ACAGCCTATTTTGAGTTGTCTGA 58.027 39.130 0.00 0.00 0.00 3.27
4315 4868 5.695851 AACAGCCTATTTTGAGTTGTCTG 57.304 39.130 0.00 0.00 0.00 3.51
4316 4869 6.507023 CAAAACAGCCTATTTTGAGTTGTCT 58.493 36.000 1.96 0.00 45.75 3.41
4317 4870 5.175673 GCAAAACAGCCTATTTTGAGTTGTC 59.824 40.000 12.19 0.00 45.75 3.18
4318 4871 5.049828 GCAAAACAGCCTATTTTGAGTTGT 58.950 37.500 12.19 0.00 45.75 3.32
4319 4872 5.049167 TGCAAAACAGCCTATTTTGAGTTG 58.951 37.500 12.19 4.12 45.75 3.16
4320 4873 5.049828 GTGCAAAACAGCCTATTTTGAGTT 58.950 37.500 12.19 0.00 45.75 3.01
4321 4874 4.099266 TGTGCAAAACAGCCTATTTTGAGT 59.901 37.500 12.19 0.00 45.75 3.41
4322 4875 4.619973 TGTGCAAAACAGCCTATTTTGAG 58.380 39.130 12.19 0.00 45.75 3.02
4323 4876 4.662468 TGTGCAAAACAGCCTATTTTGA 57.338 36.364 12.19 0.00 45.75 2.69
4324 4877 5.236911 ACAATGTGCAAAACAGCCTATTTTG 59.763 36.000 3.83 3.83 45.68 2.44
4325 4878 5.367302 ACAATGTGCAAAACAGCCTATTTT 58.633 33.333 0.00 0.00 43.64 1.82
4326 4879 4.959723 ACAATGTGCAAAACAGCCTATTT 58.040 34.783 0.00 0.00 43.64 1.40
4327 4880 4.281688 AGACAATGTGCAAAACAGCCTATT 59.718 37.500 0.00 0.00 43.64 1.73
4328 4881 3.828451 AGACAATGTGCAAAACAGCCTAT 59.172 39.130 0.00 0.00 43.64 2.57
4329 4882 3.004629 CAGACAATGTGCAAAACAGCCTA 59.995 43.478 0.00 0.00 43.64 3.93
4330 4883 2.034124 AGACAATGTGCAAAACAGCCT 58.966 42.857 0.00 0.00 43.64 4.58
4331 4884 2.129607 CAGACAATGTGCAAAACAGCC 58.870 47.619 0.00 0.00 43.64 4.85
4332 4885 3.082698 TCAGACAATGTGCAAAACAGC 57.917 42.857 0.00 0.00 43.64 4.40
4333 4886 5.521010 ACATTTCAGACAATGTGCAAAACAG 59.479 36.000 0.00 0.00 44.19 3.16
4334 4887 5.417811 ACATTTCAGACAATGTGCAAAACA 58.582 33.333 0.00 0.00 44.19 2.83
4335 4888 5.750067 AGACATTTCAGACAATGTGCAAAAC 59.250 36.000 12.82 2.36 45.55 2.43
4336 4889 5.904941 AGACATTTCAGACAATGTGCAAAA 58.095 33.333 12.82 0.00 45.55 2.44
4337 4890 5.518848 AGACATTTCAGACAATGTGCAAA 57.481 34.783 12.82 0.00 45.55 3.68
4338 4891 5.067544 TGAAGACATTTCAGACAATGTGCAA 59.932 36.000 12.82 0.00 45.55 4.08
4339 4892 4.579753 TGAAGACATTTCAGACAATGTGCA 59.420 37.500 12.82 0.00 45.55 4.57
4340 4893 5.112220 TGAAGACATTTCAGACAATGTGC 57.888 39.130 12.82 7.29 45.55 4.57
4341 4894 6.147581 CCTTGAAGACATTTCAGACAATGTG 58.852 40.000 12.82 2.31 45.55 3.21
4343 4896 6.206243 AGACCTTGAAGACATTTCAGACAATG 59.794 38.462 0.00 0.00 39.67 2.82
4344 4897 6.302269 AGACCTTGAAGACATTTCAGACAAT 58.698 36.000 0.00 0.00 0.00 2.71
4345 4898 5.684704 AGACCTTGAAGACATTTCAGACAA 58.315 37.500 0.00 0.00 0.00 3.18
4346 4899 5.296151 AGACCTTGAAGACATTTCAGACA 57.704 39.130 0.00 0.00 0.00 3.41
4347 4900 7.913674 ATAAGACCTTGAAGACATTTCAGAC 57.086 36.000 0.00 0.00 0.00 3.51
4353 4906 9.793259 TCACTTTTATAAGACCTTGAAGACATT 57.207 29.630 0.00 0.00 35.30 2.71
4354 4907 9.793259 TTCACTTTTATAAGACCTTGAAGACAT 57.207 29.630 0.00 0.00 35.30 3.06
4355 4908 9.052759 GTTCACTTTTATAAGACCTTGAAGACA 57.947 33.333 0.00 0.00 35.30 3.41
4356 4909 9.052759 TGTTCACTTTTATAAGACCTTGAAGAC 57.947 33.333 0.00 0.00 35.30 3.01
4357 4910 9.273016 CTGTTCACTTTTATAAGACCTTGAAGA 57.727 33.333 0.00 0.00 35.30 2.87
4358 4911 9.273016 TCTGTTCACTTTTATAAGACCTTGAAG 57.727 33.333 0.00 0.00 35.30 3.02
4359 4912 9.273016 CTCTGTTCACTTTTATAAGACCTTGAA 57.727 33.333 0.00 0.00 35.30 2.69
4360 4913 7.878127 CCTCTGTTCACTTTTATAAGACCTTGA 59.122 37.037 0.00 0.00 35.30 3.02
4361 4914 7.119846 CCCTCTGTTCACTTTTATAAGACCTTG 59.880 40.741 0.00 0.00 35.30 3.61
4362 4915 7.017254 TCCCTCTGTTCACTTTTATAAGACCTT 59.983 37.037 0.00 0.00 35.30 3.50
4363 4916 6.500751 TCCCTCTGTTCACTTTTATAAGACCT 59.499 38.462 0.00 0.00 35.30 3.85
4364 4917 6.708285 TCCCTCTGTTCACTTTTATAAGACC 58.292 40.000 0.00 0.00 35.30 3.85
4365 4918 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
4366 4919 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
4367 4920 8.311836 TGTACTCCCTCTGTTCACTTTTATAAG 58.688 37.037 0.00 0.00 37.40 1.73
4368 4921 8.197592 TGTACTCCCTCTGTTCACTTTTATAA 57.802 34.615 0.00 0.00 0.00 0.98
4369 4922 7.786046 TGTACTCCCTCTGTTCACTTTTATA 57.214 36.000 0.00 0.00 0.00 0.98
4370 4923 6.681729 TGTACTCCCTCTGTTCACTTTTAT 57.318 37.500 0.00 0.00 0.00 1.40
4371 4924 6.126997 TGTTGTACTCCCTCTGTTCACTTTTA 60.127 38.462 0.00 0.00 0.00 1.52
4372 4925 5.123936 GTTGTACTCCCTCTGTTCACTTTT 58.876 41.667 0.00 0.00 0.00 2.27
4373 4926 4.163458 TGTTGTACTCCCTCTGTTCACTTT 59.837 41.667 0.00 0.00 0.00 2.66
4374 4927 3.709653 TGTTGTACTCCCTCTGTTCACTT 59.290 43.478 0.00 0.00 0.00 3.16
4375 4928 3.305720 TGTTGTACTCCCTCTGTTCACT 58.694 45.455 0.00 0.00 0.00 3.41
4376 4929 3.746045 TGTTGTACTCCCTCTGTTCAC 57.254 47.619 0.00 0.00 0.00 3.18
4377 4930 5.719563 TGATATGTTGTACTCCCTCTGTTCA 59.280 40.000 0.00 0.00 0.00 3.18
4378 4931 6.222038 TGATATGTTGTACTCCCTCTGTTC 57.778 41.667 0.00 0.00 0.00 3.18
4379 4932 6.814954 ATGATATGTTGTACTCCCTCTGTT 57.185 37.500 0.00 0.00 0.00 3.16
4380 4933 7.344612 TGTTATGATATGTTGTACTCCCTCTGT 59.655 37.037 0.00 0.00 0.00 3.41
4381 4934 7.653713 GTGTTATGATATGTTGTACTCCCTCTG 59.346 40.741 0.00 0.00 0.00 3.35
4382 4935 7.202011 GGTGTTATGATATGTTGTACTCCCTCT 60.202 40.741 0.00 0.00 0.00 3.69
4383 4936 6.929606 GGTGTTATGATATGTTGTACTCCCTC 59.070 42.308 0.00 0.00 0.00 4.30
4384 4937 6.183361 GGGTGTTATGATATGTTGTACTCCCT 60.183 42.308 0.00 0.00 35.82 4.20
4385 4938 5.995897 GGGTGTTATGATATGTTGTACTCCC 59.004 44.000 0.00 0.00 32.66 4.30
4386 4939 6.827727 AGGGTGTTATGATATGTTGTACTCC 58.172 40.000 0.00 0.00 0.00 3.85
4387 4940 8.732746 AAAGGGTGTTATGATATGTTGTACTC 57.267 34.615 0.00 0.00 0.00 2.59
4388 4941 8.548877 AGAAAGGGTGTTATGATATGTTGTACT 58.451 33.333 0.00 0.00 0.00 2.73
4389 4942 8.732746 AGAAAGGGTGTTATGATATGTTGTAC 57.267 34.615 0.00 0.00 0.00 2.90
4390 4943 9.747898 AAAGAAAGGGTGTTATGATATGTTGTA 57.252 29.630 0.00 0.00 0.00 2.41
4391 4944 8.650143 AAAGAAAGGGTGTTATGATATGTTGT 57.350 30.769 0.00 0.00 0.00 3.32
4392 4945 9.927668 AAAAAGAAAGGGTGTTATGATATGTTG 57.072 29.630 0.00 0.00 0.00 3.33
4454 5007 4.091509 GTCATTGTCTACAGCTACAAACGG 59.908 45.833 3.99 0.00 38.95 4.44
4464 5017 5.900425 ACAGCTAGATGTCATTGTCTACAG 58.100 41.667 8.07 0.00 0.00 2.74
4562 5131 0.163788 GCGTGTGGTTCATGTCTTCG 59.836 55.000 0.00 0.00 35.64 3.79
4594 5163 3.940229 GGTCATGTACCGTTGGGAA 57.060 52.632 0.00 0.00 38.88 3.97
4623 5194 0.179234 TGAAAGACAAGCACCCGACA 59.821 50.000 0.00 0.00 0.00 4.35
4748 5319 1.423541 TGGCTCCCTTCTTTTACAGCA 59.576 47.619 0.00 0.00 0.00 4.41
4761 5332 3.614399 CCACGAGATTATGGCTCCC 57.386 57.895 0.00 0.00 0.00 4.30
4769 5340 2.690497 CCTGAGAGAAGCCACGAGATTA 59.310 50.000 0.00 0.00 0.00 1.75
4829 5401 4.336993 ACATCTAAAACTGCGAAACCACAA 59.663 37.500 0.00 0.00 0.00 3.33
4833 5405 3.424433 CCGACATCTAAAACTGCGAAACC 60.424 47.826 0.00 0.00 0.00 3.27
4871 5443 9.248291 GAGAACAGATTTTCAATGTTTTGCTAA 57.752 29.630 0.00 0.00 37.29 3.09
5097 5675 3.678717 TACAGCGAGCGAGCGGAAC 62.679 63.158 12.54 0.00 43.00 3.62
5098 5676 2.480853 TTTACAGCGAGCGAGCGGAA 62.481 55.000 12.54 3.49 43.00 4.30
5099 5677 2.867333 CTTTACAGCGAGCGAGCGGA 62.867 60.000 12.54 0.00 43.00 5.54
5100 5678 2.506217 TTTACAGCGAGCGAGCGG 60.506 61.111 5.24 5.24 43.00 5.52
5101 5679 2.990735 CTTTACAGCGAGCGAGCG 59.009 61.111 0.00 0.00 43.00 5.03
5102 5680 2.698020 GCTTTACAGCGAGCGAGC 59.302 61.111 0.00 0.00 35.91 5.03
5130 5708 4.541482 CGCGGCGCTCATTGCAAT 62.541 61.111 30.54 5.99 43.06 3.56
5204 5801 3.028130 AGGGTCAAAACACCAAAATCGT 58.972 40.909 0.00 0.00 38.32 3.73
5209 5806 5.228945 TCAAAAAGGGTCAAAACACCAAA 57.771 34.783 0.00 0.00 38.32 3.28
5212 5809 6.561737 TTTTTCAAAAAGGGTCAAAACACC 57.438 33.333 0.00 0.00 35.42 4.16
5214 5811 7.361286 CCGAATTTTTCAAAAAGGGTCAAAACA 60.361 33.333 1.08 0.00 0.00 2.83
5235 5832 3.023832 CCAAGGTAAGATTTGGCCGAAT 58.976 45.455 18.71 18.71 37.61 3.34
5239 5836 3.161866 TGAACCAAGGTAAGATTTGGCC 58.838 45.455 0.00 0.00 46.16 5.36
5269 5866 7.907389 ACTGTAGAAAATTGGTCAGATACTGA 58.093 34.615 0.00 0.00 38.25 3.41
5272 5869 8.723942 ATGACTGTAGAAAATTGGTCAGATAC 57.276 34.615 0.00 0.00 37.18 2.24
5273 5870 9.166173 CAATGACTGTAGAAAATTGGTCAGATA 57.834 33.333 0.00 0.00 37.18 1.98
5281 5878 7.439157 TGAGACCAATGACTGTAGAAAATTG 57.561 36.000 0.00 0.00 0.00 2.32
5282 5879 8.641498 ATTGAGACCAATGACTGTAGAAAATT 57.359 30.769 0.00 0.00 41.18 1.82
5296 5893 4.660303 TGCTACCCTATCATTGAGACCAAT 59.340 41.667 0.00 0.00 43.37 3.16
5297 5894 4.037222 TGCTACCCTATCATTGAGACCAA 58.963 43.478 0.00 0.00 36.61 3.67
5298 5895 3.388024 GTGCTACCCTATCATTGAGACCA 59.612 47.826 0.00 0.00 0.00 4.02
5299 5896 3.388024 TGTGCTACCCTATCATTGAGACC 59.612 47.826 0.00 0.00 0.00 3.85
5300 5897 4.672587 TGTGCTACCCTATCATTGAGAC 57.327 45.455 0.00 0.00 0.00 3.36
5301 5898 4.141711 GGTTGTGCTACCCTATCATTGAGA 60.142 45.833 0.00 0.00 31.71 3.27
5302 5899 4.130118 GGTTGTGCTACCCTATCATTGAG 58.870 47.826 0.00 0.00 31.71 3.02
5303 5900 3.780294 AGGTTGTGCTACCCTATCATTGA 59.220 43.478 0.00 0.00 39.08 2.57
5304 5901 4.156455 AGGTTGTGCTACCCTATCATTG 57.844 45.455 0.00 0.00 39.08 2.82
5305 5902 4.969359 AGTAGGTTGTGCTACCCTATCATT 59.031 41.667 0.00 0.00 39.08 2.57
5306 5903 4.345257 CAGTAGGTTGTGCTACCCTATCAT 59.655 45.833 0.00 0.00 39.08 2.45
5307 5904 3.704566 CAGTAGGTTGTGCTACCCTATCA 59.295 47.826 0.00 0.00 39.08 2.15
5308 5905 3.492829 GCAGTAGGTTGTGCTACCCTATC 60.493 52.174 0.00 0.00 39.08 2.08
5309 5906 2.434702 GCAGTAGGTTGTGCTACCCTAT 59.565 50.000 0.00 0.00 39.08 2.57
5310 5907 1.829222 GCAGTAGGTTGTGCTACCCTA 59.171 52.381 0.00 0.00 39.08 3.53
5311 5908 0.613777 GCAGTAGGTTGTGCTACCCT 59.386 55.000 0.00 0.00 39.08 4.34
5312 5909 0.392595 GGCAGTAGGTTGTGCTACCC 60.393 60.000 0.00 0.00 39.08 3.69
5313 5910 0.323629 TGGCAGTAGGTTGTGCTACC 59.676 55.000 0.00 0.00 39.76 3.18
5314 5911 1.676014 CCTGGCAGTAGGTTGTGCTAC 60.676 57.143 14.43 0.00 39.76 3.58
5315 5912 0.613260 CCTGGCAGTAGGTTGTGCTA 59.387 55.000 14.43 0.00 39.76 3.49
5316 5913 1.376466 CCTGGCAGTAGGTTGTGCT 59.624 57.895 14.43 0.00 39.76 4.40
5317 5914 1.675641 CCCTGGCAGTAGGTTGTGC 60.676 63.158 14.43 0.00 39.08 4.57
5318 5915 0.321653 GACCCTGGCAGTAGGTTGTG 60.322 60.000 15.36 0.00 36.02 3.33
5319 5916 0.473886 AGACCCTGGCAGTAGGTTGT 60.474 55.000 15.36 5.23 36.02 3.32
5320 5917 0.693049 AAGACCCTGGCAGTAGGTTG 59.307 55.000 15.36 0.00 36.02 3.77
5321 5918 1.446016 AAAGACCCTGGCAGTAGGTT 58.554 50.000 15.36 4.85 36.02 3.50
5322 5919 2.188817 CTAAAGACCCTGGCAGTAGGT 58.811 52.381 14.33 14.33 36.02 3.08
5323 5920 1.134371 GCTAAAGACCCTGGCAGTAGG 60.134 57.143 14.43 10.97 37.59 3.18
5324 5921 1.555075 TGCTAAAGACCCTGGCAGTAG 59.445 52.381 14.43 8.36 0.00 2.57
5325 5922 1.555075 CTGCTAAAGACCCTGGCAGTA 59.445 52.381 14.43 0.00 43.44 2.74
5326 5923 0.326264 CTGCTAAAGACCCTGGCAGT 59.674 55.000 14.43 0.00 43.44 4.40
5327 5924 3.165606 CTGCTAAAGACCCTGGCAG 57.834 57.895 7.75 7.75 43.03 4.85
5328 5925 1.555075 CTACTGCTAAAGACCCTGGCA 59.445 52.381 0.00 0.00 0.00 4.92
5329 5926 1.134371 CCTACTGCTAAAGACCCTGGC 60.134 57.143 0.00 0.00 0.00 4.85
5330 5927 2.168728 GTCCTACTGCTAAAGACCCTGG 59.831 54.545 0.00 0.00 0.00 4.45
5331 5928 3.100671 AGTCCTACTGCTAAAGACCCTG 58.899 50.000 0.00 0.00 0.00 4.45
5332 5929 3.245658 TGAGTCCTACTGCTAAAGACCCT 60.246 47.826 0.00 0.00 0.00 4.34
5333 5930 3.097614 TGAGTCCTACTGCTAAAGACCC 58.902 50.000 0.00 0.00 0.00 4.46
5334 5931 3.764972 AGTGAGTCCTACTGCTAAAGACC 59.235 47.826 0.00 0.00 0.00 3.85
5335 5932 4.381079 CCAGTGAGTCCTACTGCTAAAGAC 60.381 50.000 5.31 0.00 43.19 3.01
5336 5933 3.764434 CCAGTGAGTCCTACTGCTAAAGA 59.236 47.826 5.31 0.00 43.19 2.52
5337 5934 3.677424 GCCAGTGAGTCCTACTGCTAAAG 60.677 52.174 5.31 0.00 43.19 1.85
5338 5935 2.233922 GCCAGTGAGTCCTACTGCTAAA 59.766 50.000 5.31 0.00 43.19 1.85
5339 5936 1.825474 GCCAGTGAGTCCTACTGCTAA 59.175 52.381 5.31 0.00 43.19 3.09
5340 5937 1.272480 TGCCAGTGAGTCCTACTGCTA 60.272 52.381 5.31 0.00 43.19 3.49
5341 5938 0.542938 TGCCAGTGAGTCCTACTGCT 60.543 55.000 5.31 0.00 43.19 4.24
5342 5939 0.390472 GTGCCAGTGAGTCCTACTGC 60.390 60.000 5.31 2.84 43.19 4.40
5343 5940 0.247736 GGTGCCAGTGAGTCCTACTG 59.752 60.000 4.06 4.06 43.94 2.74
5344 5941 1.251527 CGGTGCCAGTGAGTCCTACT 61.252 60.000 0.00 0.00 0.00 2.57
5345 5942 1.215647 CGGTGCCAGTGAGTCCTAC 59.784 63.158 0.00 0.00 0.00 3.18
5346 5943 1.228769 ACGGTGCCAGTGAGTCCTA 60.229 57.895 0.00 0.00 0.00 2.94
5347 5944 2.524394 ACGGTGCCAGTGAGTCCT 60.524 61.111 0.00 0.00 0.00 3.85
5348 5945 2.048127 GACGGTGCCAGTGAGTCC 60.048 66.667 0.00 0.00 0.00 3.85
5349 5946 1.664965 GTGACGGTGCCAGTGAGTC 60.665 63.158 0.00 0.00 0.00 3.36
5350 5947 2.421739 GTGACGGTGCCAGTGAGT 59.578 61.111 0.00 0.00 0.00 3.41
5351 5948 2.492449 ATCGTGACGGTGCCAGTGAG 62.492 60.000 4.70 0.00 0.00 3.51
5352 5949 2.486636 GATCGTGACGGTGCCAGTGA 62.487 60.000 4.70 0.00 0.00 3.41
5353 5950 2.048222 ATCGTGACGGTGCCAGTG 60.048 61.111 4.70 0.00 0.00 3.66
5354 5951 1.888436 ATGATCGTGACGGTGCCAGT 61.888 55.000 4.70 0.00 0.00 4.00
5355 5952 0.740868 AATGATCGTGACGGTGCCAG 60.741 55.000 4.70 0.00 0.00 4.85
5356 5953 0.321210 AAATGATCGTGACGGTGCCA 60.321 50.000 4.70 0.00 0.00 4.92
5357 5954 0.096976 CAAATGATCGTGACGGTGCC 59.903 55.000 4.70 0.00 0.00 5.01
5358 5955 1.075542 TCAAATGATCGTGACGGTGC 58.924 50.000 4.70 0.00 0.00 5.01
5359 5956 2.672874 ACATCAAATGATCGTGACGGTG 59.327 45.455 4.70 0.00 31.21 4.94
5360 5957 2.672874 CACATCAAATGATCGTGACGGT 59.327 45.455 4.70 0.00 36.54 4.83
5361 5958 2.929398 TCACATCAAATGATCGTGACGG 59.071 45.455 4.70 0.00 37.50 4.79
5362 5959 4.582441 TTCACATCAAATGATCGTGACG 57.418 40.909 19.18 0.00 39.67 4.35
5363 5960 7.059945 GTCTTTTTCACATCAAATGATCGTGAC 59.940 37.037 19.18 10.14 39.67 3.67
5364 5961 7.077605 GTCTTTTTCACATCAAATGATCGTGA 58.922 34.615 17.17 17.17 38.99 4.35
5365 5962 6.857451 TGTCTTTTTCACATCAAATGATCGTG 59.143 34.615 14.46 14.46 36.17 4.35
5366 5963 6.857964 GTGTCTTTTTCACATCAAATGATCGT 59.142 34.615 0.00 0.00 36.05 3.73
5367 5964 7.080099 AGTGTCTTTTTCACATCAAATGATCG 58.920 34.615 0.00 0.00 38.16 3.69
5368 5965 9.897744 TTAGTGTCTTTTTCACATCAAATGATC 57.102 29.630 0.00 0.00 38.16 2.92
5370 5967 9.681692 CATTAGTGTCTTTTTCACATCAAATGA 57.318 29.630 0.00 0.00 38.16 2.57
5371 5968 8.918658 CCATTAGTGTCTTTTTCACATCAAATG 58.081 33.333 0.00 0.00 38.16 2.32
5372 5969 8.859090 TCCATTAGTGTCTTTTTCACATCAAAT 58.141 29.630 0.00 0.00 38.16 2.32
5373 5970 8.231692 TCCATTAGTGTCTTTTTCACATCAAA 57.768 30.769 0.00 0.00 38.16 2.69
5374 5971 7.815840 TCCATTAGTGTCTTTTTCACATCAA 57.184 32.000 0.00 0.00 38.16 2.57
5375 5972 8.408043 AATCCATTAGTGTCTTTTTCACATCA 57.592 30.769 0.00 0.00 38.16 3.07
5382 5979 9.927668 CACCAATTAATCCATTAGTGTCTTTTT 57.072 29.630 0.00 0.00 0.00 1.94
5383 5980 8.034804 GCACCAATTAATCCATTAGTGTCTTTT 58.965 33.333 0.00 0.00 0.00 2.27
5384 5981 7.178274 TGCACCAATTAATCCATTAGTGTCTTT 59.822 33.333 0.00 0.00 0.00 2.52
5385 5982 6.663093 TGCACCAATTAATCCATTAGTGTCTT 59.337 34.615 0.00 0.00 0.00 3.01
5386 5983 6.186957 TGCACCAATTAATCCATTAGTGTCT 58.813 36.000 0.00 0.00 0.00 3.41
5387 5984 6.449635 TGCACCAATTAATCCATTAGTGTC 57.550 37.500 0.00 0.00 0.00 3.67
5388 5985 6.683610 GCATGCACCAATTAATCCATTAGTGT 60.684 38.462 14.21 0.00 0.00 3.55
5389 5986 5.693104 GCATGCACCAATTAATCCATTAGTG 59.307 40.000 14.21 0.00 0.00 2.74
5390 5987 5.363292 TGCATGCACCAATTAATCCATTAGT 59.637 36.000 18.46 0.00 0.00 2.24
5391 5988 5.845103 TGCATGCACCAATTAATCCATTAG 58.155 37.500 18.46 0.00 0.00 1.73
5392 5989 5.866159 TGCATGCACCAATTAATCCATTA 57.134 34.783 18.46 0.00 0.00 1.90
5393 5990 4.757019 TGCATGCACCAATTAATCCATT 57.243 36.364 18.46 0.00 0.00 3.16
5394 5991 4.504165 CCATGCATGCACCAATTAATCCAT 60.504 41.667 25.37 0.00 0.00 3.41
5395 5992 3.181464 CCATGCATGCACCAATTAATCCA 60.181 43.478 25.37 0.00 0.00 3.41
5396 5993 3.069872 TCCATGCATGCACCAATTAATCC 59.930 43.478 25.37 0.00 0.00 3.01
5397 5994 4.325028 TCCATGCATGCACCAATTAATC 57.675 40.909 25.37 0.00 0.00 1.75
5398 5995 4.101898 ACATCCATGCATGCACCAATTAAT 59.898 37.500 25.37 0.38 0.00 1.40
5399 5996 3.451540 ACATCCATGCATGCACCAATTAA 59.548 39.130 25.37 4.86 0.00 1.40
5400 5997 3.032459 ACATCCATGCATGCACCAATTA 58.968 40.909 25.37 5.98 0.00 1.40
5401 5998 1.834896 ACATCCATGCATGCACCAATT 59.165 42.857 25.37 3.10 0.00 2.32
5402 5999 1.491668 ACATCCATGCATGCACCAAT 58.508 45.000 25.37 13.41 0.00 3.16
5403 6000 1.066787 CAACATCCATGCATGCACCAA 60.067 47.619 25.37 11.49 0.00 3.67
5404 6001 0.533032 CAACATCCATGCATGCACCA 59.467 50.000 25.37 10.21 0.00 4.17
5405 6002 0.808453 GCAACATCCATGCATGCACC 60.808 55.000 25.37 0.00 43.29 5.01
5406 6003 2.673074 GCAACATCCATGCATGCAC 58.327 52.632 25.37 2.52 43.29 4.57
5412 6009 1.890625 TTGGCCTGCAACATCCATGC 61.891 55.000 3.32 0.00 44.08 4.06
5413 6010 0.108520 GTTGGCCTGCAACATCCATG 60.109 55.000 3.32 0.00 33.13 3.66
5414 6011 0.542467 TGTTGGCCTGCAACATCCAT 60.542 50.000 3.32 0.00 37.59 3.41
5415 6012 0.758310 TTGTTGGCCTGCAACATCCA 60.758 50.000 3.32 0.00 41.45 3.41
5416 6013 0.319813 GTTGTTGGCCTGCAACATCC 60.320 55.000 26.70 11.41 43.03 3.51
5417 6014 0.388659 TGTTGTTGGCCTGCAACATC 59.611 50.000 28.92 19.21 46.58 3.06
5418 6015 2.514129 TGTTGTTGGCCTGCAACAT 58.486 47.368 28.92 0.00 46.58 2.71
5420 6017 0.108424 TGTTGTTGTTGGCCTGCAAC 60.108 50.000 25.66 25.66 43.60 4.17
5421 6018 0.610174 TTGTTGTTGTTGGCCTGCAA 59.390 45.000 3.32 6.36 0.00 4.08
5422 6019 0.610174 TTTGTTGTTGTTGGCCTGCA 59.390 45.000 3.32 0.00 0.00 4.41
5423 6020 1.731720 TTTTGTTGTTGTTGGCCTGC 58.268 45.000 3.32 0.00 0.00 4.85
5424 6021 3.070018 TGTTTTTGTTGTTGTTGGCCTG 58.930 40.909 3.32 0.00 0.00 4.85
5425 6022 3.409026 TGTTTTTGTTGTTGTTGGCCT 57.591 38.095 3.32 0.00 0.00 5.19
5426 6023 4.489679 TTTGTTTTTGTTGTTGTTGGCC 57.510 36.364 0.00 0.00 0.00 5.36
5427 6024 5.743872 TGTTTTTGTTTTTGTTGTTGTTGGC 59.256 32.000 0.00 0.00 0.00 4.52
5428 6025 7.740519 TTGTTTTTGTTTTTGTTGTTGTTGG 57.259 28.000 0.00 0.00 0.00 3.77
5431 6028 8.323854 GCATTTTGTTTTTGTTTTTGTTGTTGT 58.676 25.926 0.00 0.00 0.00 3.32
5432 6029 8.538039 AGCATTTTGTTTTTGTTTTTGTTGTTG 58.462 25.926 0.00 0.00 0.00 3.33
5433 6030 8.640091 AGCATTTTGTTTTTGTTTTTGTTGTT 57.360 23.077 0.00 0.00 0.00 2.83
5434 6031 9.736023 TTAGCATTTTGTTTTTGTTTTTGTTGT 57.264 22.222 0.00 0.00 0.00 3.32
5437 6034 9.824534 CTCTTAGCATTTTGTTTTTGTTTTTGT 57.175 25.926 0.00 0.00 0.00 2.83
5438 6035 8.787884 GCTCTTAGCATTTTGTTTTTGTTTTTG 58.212 29.630 0.00 0.00 41.89 2.44
5439 6036 8.894409 GCTCTTAGCATTTTGTTTTTGTTTTT 57.106 26.923 0.00 0.00 41.89 1.94
5456 6053 1.604185 CCGGCTGTAGATGCTCTTAGC 60.604 57.143 0.00 10.69 42.82 3.09
5457 6054 1.604185 GCCGGCTGTAGATGCTCTTAG 60.604 57.143 22.15 0.00 0.00 2.18
5458 6055 0.389391 GCCGGCTGTAGATGCTCTTA 59.611 55.000 22.15 0.00 0.00 2.10
5459 6056 1.144936 GCCGGCTGTAGATGCTCTT 59.855 57.895 22.15 0.00 0.00 2.85
5460 6057 2.818132 GCCGGCTGTAGATGCTCT 59.182 61.111 22.15 0.00 0.00 4.09
5461 6058 2.659897 CGCCGGCTGTAGATGCTC 60.660 66.667 26.68 0.00 0.00 4.26
5462 6059 4.899239 GCGCCGGCTGTAGATGCT 62.899 66.667 26.68 0.00 35.83 3.79
5479 6076 1.890174 GTTTGAGGCCGATTTGGGG 59.110 57.895 0.00 0.00 38.63 4.96
5480 6077 1.506262 CGTTTGAGGCCGATTTGGG 59.494 57.895 0.00 0.00 38.63 4.12
5481 6078 1.154035 GCGTTTGAGGCCGATTTGG 60.154 57.895 0.00 0.00 42.50 3.28
5482 6079 1.154035 GGCGTTTGAGGCCGATTTG 60.154 57.895 0.00 0.00 39.53 2.32
5483 6080 3.274067 GGCGTTTGAGGCCGATTT 58.726 55.556 0.00 0.00 39.53 2.17
5490 6087 3.726517 CTGCACGGGCGTTTGAGG 61.727 66.667 4.58 0.00 45.35 3.86
5491 6088 4.389576 GCTGCACGGGCGTTTGAG 62.390 66.667 4.58 0.00 45.35 3.02
5500 6097 4.155733 TATGGACGGGCTGCACGG 62.156 66.667 29.24 10.69 35.23 4.94
5501 6098 2.586079 CTATGGACGGGCTGCACG 60.586 66.667 24.43 24.43 37.36 5.34
5502 6099 2.897350 GCTATGGACGGGCTGCAC 60.897 66.667 0.50 0.00 0.00 4.57
5503 6100 3.083349 AGCTATGGACGGGCTGCA 61.083 61.111 0.50 0.00 34.82 4.41
5504 6101 2.590007 CAGCTATGGACGGGCTGC 60.590 66.667 0.00 0.00 45.04 5.25
5514 6111 2.572095 TTCGTGACCGGCCAGCTATG 62.572 60.000 0.00 0.00 33.95 2.23
5515 6112 1.895020 TTTCGTGACCGGCCAGCTAT 61.895 55.000 0.00 0.00 33.95 2.97
5516 6113 2.102109 TTTTCGTGACCGGCCAGCTA 62.102 55.000 0.00 0.00 33.95 3.32
5517 6114 2.748058 ATTTTCGTGACCGGCCAGCT 62.748 55.000 0.00 0.00 33.95 4.24
5518 6115 2.253414 GATTTTCGTGACCGGCCAGC 62.253 60.000 0.00 0.00 33.95 4.85
5519 6116 0.673644 AGATTTTCGTGACCGGCCAG 60.674 55.000 0.00 0.00 33.95 4.85
5520 6117 0.953471 CAGATTTTCGTGACCGGCCA 60.953 55.000 0.00 0.00 33.95 5.36
5521 6118 0.672401 TCAGATTTTCGTGACCGGCC 60.672 55.000 0.00 0.00 33.95 6.13
5522 6119 0.442699 GTCAGATTTTCGTGACCGGC 59.557 55.000 0.00 0.00 37.67 6.13
5526 6123 2.996621 CTCTGGGTCAGATTTTCGTGAC 59.003 50.000 0.00 0.00 39.92 3.67
5527 6124 2.028112 CCTCTGGGTCAGATTTTCGTGA 60.028 50.000 0.00 0.00 39.92 4.35
5528 6125 2.350522 CCTCTGGGTCAGATTTTCGTG 58.649 52.381 0.00 0.00 39.92 4.35
5529 6126 1.279271 CCCTCTGGGTCAGATTTTCGT 59.721 52.381 0.00 0.00 39.92 3.85
5530 6127 2.029838 CCCTCTGGGTCAGATTTTCG 57.970 55.000 0.00 0.00 39.92 3.46
5553 6150 0.457035 CATTTGATGCCCGTTGGAGG 59.543 55.000 0.00 0.00 0.00 4.30
5564 6161 1.753848 TGAGCCCGGGCATTTGATG 60.754 57.895 45.13 6.17 44.88 3.07
5565 6162 1.754234 GTGAGCCCGGGCATTTGAT 60.754 57.895 45.13 25.93 44.88 2.57
5566 6163 2.361104 GTGAGCCCGGGCATTTGA 60.361 61.111 45.13 19.16 44.88 2.69
5567 6164 2.361610 AGTGAGCCCGGGCATTTG 60.362 61.111 45.13 8.75 44.88 2.32
5568 6165 2.361610 CAGTGAGCCCGGGCATTT 60.362 61.111 45.13 27.63 44.88 2.32
5569 6166 4.431131 CCAGTGAGCCCGGGCATT 62.431 66.667 45.13 28.48 44.88 3.56
5577 6174 4.416738 GAGGGGTGCCAGTGAGCC 62.417 72.222 0.00 0.00 0.00 4.70
5578 6175 3.640407 TGAGGGGTGCCAGTGAGC 61.640 66.667 0.00 0.00 0.00 4.26
5579 6176 1.845627 ATGTGAGGGGTGCCAGTGAG 61.846 60.000 0.00 0.00 0.00 3.51
5580 6177 0.546507 TATGTGAGGGGTGCCAGTGA 60.547 55.000 0.00 0.00 0.00 3.41
5581 6178 0.392998 GTATGTGAGGGGTGCCAGTG 60.393 60.000 0.00 0.00 0.00 3.66
5582 6179 0.840288 TGTATGTGAGGGGTGCCAGT 60.840 55.000 0.00 0.00 0.00 4.00
5583 6180 0.107508 CTGTATGTGAGGGGTGCCAG 60.108 60.000 0.00 0.00 0.00 4.85
5584 6181 1.990424 CTGTATGTGAGGGGTGCCA 59.010 57.895 0.00 0.00 0.00 4.92
5585 6182 1.452108 GCTGTATGTGAGGGGTGCC 60.452 63.158 0.00 0.00 0.00 5.01
5586 6183 1.452108 GGCTGTATGTGAGGGGTGC 60.452 63.158 0.00 0.00 0.00 5.01
5587 6184 1.224592 GGGCTGTATGTGAGGGGTG 59.775 63.158 0.00 0.00 0.00 4.61
5588 6185 0.844661 TTGGGCTGTATGTGAGGGGT 60.845 55.000 0.00 0.00 0.00 4.95
5589 6186 0.331278 TTTGGGCTGTATGTGAGGGG 59.669 55.000 0.00 0.00 0.00 4.79
5590 6187 2.442236 ATTTGGGCTGTATGTGAGGG 57.558 50.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.