Multiple sequence alignment - TraesCS3A01G363900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G363900 chr3A 100.000 6396 0 0 1 6396 612528998 612522603 0.000000e+00 11812.0
1 TraesCS3A01G363900 chr3A 98.058 103 1 1 3627 3729 612525269 612525168 1.830000e-40 178.0
2 TraesCS3A01G363900 chr3A 98.058 103 1 1 3730 3831 612525372 612525270 1.830000e-40 178.0
3 TraesCS3A01G363900 chr3D 90.829 3849 164 78 3 3729 470491886 470488105 0.000000e+00 4977.0
4 TraesCS3A01G363900 chr3D 92.188 1344 58 17 4347 5670 470487534 470486218 0.000000e+00 1857.0
5 TraesCS3A01G363900 chr3D 93.437 579 25 9 3730 4308 470488206 470487641 0.000000e+00 846.0
6 TraesCS3A01G363900 chr3D 90.892 538 30 11 5859 6396 470485905 470485387 0.000000e+00 704.0
7 TraesCS3A01G363900 chr3D 90.132 152 11 3 5662 5810 470486037 470485887 1.820000e-45 195.0
8 TraesCS3A01G363900 chr3D 87.619 105 5 4 4211 4315 470487636 470487540 1.460000e-21 115.0
9 TraesCS3A01G363900 chr3B 92.817 3230 119 38 566 3729 624321671 624318489 0.000000e+00 4575.0
10 TraesCS3A01G363900 chr3B 92.042 2639 123 45 3730 6347 624318590 624316018 0.000000e+00 3629.0
11 TraesCS3A01G363900 chr7D 91.814 452 25 4 4497 4940 477931920 477932367 2.530000e-173 619.0
12 TraesCS3A01G363900 chr4A 91.685 445 32 2 4500 4944 90325599 90325160 4.240000e-171 612.0
13 TraesCS3A01G363900 chr4A 90.293 443 36 5 4495 4937 95390706 95391141 2.000000e-159 573.0
14 TraesCS3A01G363900 chr2A 91.333 450 34 2 4495 4944 138532997 138533441 1.520000e-170 610.0
15 TraesCS3A01G363900 chr2A 87.059 85 11 0 22 106 732597721 732597637 5.280000e-16 97.1
16 TraesCS3A01G363900 chr6B 91.236 445 31 3 4500 4944 275292528 275292092 3.300000e-167 599.0
17 TraesCS3A01G363900 chr5A 90.667 450 34 5 4495 4944 582919268 582918827 5.520000e-165 592.0
18 TraesCS3A01G363900 chr5A 87.778 450 36 6 4495 4944 616764696 616764266 5.720000e-140 508.0
19 TraesCS3A01G363900 chr1D 74.715 526 67 41 1281 1785 378699534 378700014 2.370000e-39 174.0
20 TraesCS3A01G363900 chr1D 81.696 224 20 8 5191 5399 378703103 378703320 3.970000e-37 167.0
21 TraesCS3A01G363900 chr1D 91.667 72 3 2 1130 1201 378699422 378699490 5.280000e-16 97.1
22 TraesCS3A01G363900 chr1D 86.585 82 11 0 2947 3028 269728181 269728100 2.460000e-14 91.6
23 TraesCS3A01G363900 chr1A 82.143 224 19 9 5191 5399 479544822 479545039 8.530000e-39 172.0
24 TraesCS3A01G363900 chr1A 75.520 433 59 32 1281 1712 479541288 479541674 1.100000e-37 169.0
25 TraesCS3A01G363900 chr1A 86.585 82 11 0 2947 3028 333137367 333137286 2.460000e-14 91.6
26 TraesCS3A01G363900 chr1B 75.520 433 59 32 1281 1712 507306487 507306873 1.100000e-37 169.0
27 TraesCS3A01G363900 chr1B 81.250 224 21 8 5191 5399 507310182 507310399 1.850000e-35 161.0
28 TraesCS3A01G363900 chr1B 90.789 76 3 3 1127 1201 507306371 507306443 1.470000e-16 99.0
29 TraesCS3A01G363900 chr1B 85.366 82 12 0 2947 3028 342975051 342974970 1.140000e-12 86.1
30 TraesCS3A01G363900 chr4B 81.176 85 16 0 22 106 656119589 656119673 1.150000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G363900 chr3A 612522603 612528998 6395 True 4056 11812 98.705333 1 6396 3 chr3A.!!$R1 6395
1 TraesCS3A01G363900 chr3D 470485387 470491886 6499 True 1449 4977 90.849500 3 6396 6 chr3D.!!$R1 6393
2 TraesCS3A01G363900 chr3B 624316018 624321671 5653 True 4102 4575 92.429500 566 6347 2 chr3B.!!$R1 5781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
219 220 0.034670 GCAAAGCCATCTCCCTCAGT 60.035 55.000 0.00 0.00 0.00 3.41 F
268 269 0.040425 CCGAACAGCCAAACGGAAAG 60.040 55.000 0.00 0.00 46.94 2.62 F
507 547 0.106769 TCAGCTTGGACCACAGCAAA 60.107 50.000 22.53 12.15 0.00 3.68 F
532 572 0.179018 GGCCTATTTCACTCGCCCAT 60.179 55.000 0.00 0.00 33.30 4.00 F
1918 2040 0.249073 GCGGTCACATCACTAGCGAT 60.249 55.000 0.00 0.00 36.28 4.58 F
2440 2569 0.235926 GCGAACTTGCTTGTCTGACC 59.764 55.000 5.17 0.00 0.00 4.02 F
2795 2940 0.672342 GGTGCATCAAGGGCATGATC 59.328 55.000 0.00 0.00 44.11 2.92 F
3680 3847 1.203038 ACATCAGGGTTGATTGGTGCA 60.203 47.619 0.00 0.00 42.12 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1275 1393 0.465097 CGTAGGAGTAGAAGGCCGGA 60.465 60.000 5.05 0.0 0.00 5.14 R
1809 1931 0.605589 AAGAGGCGGAAAAAGTCGGG 60.606 55.000 0.00 0.0 0.00 5.14 R
2414 2542 0.166814 CAAGCAAGTTCGCCTACTGC 59.833 55.000 0.00 0.0 0.00 4.40 R
2440 2569 8.649973 AGAAGTAAGACGCCATTAATAAAGAG 57.350 34.615 0.00 0.0 0.00 2.85 R
3213 3365 0.179089 ACACTCCATCGCTCATGCTC 60.179 55.000 0.00 0.0 36.97 4.26 R
4272 4538 0.112995 ACCATCCATGCACACCACTT 59.887 50.000 0.00 0.0 0.00 3.16 R
4273 4539 0.609957 CACCATCCATGCACACCACT 60.610 55.000 0.00 0.0 0.00 4.00 R
5565 5850 0.748005 AATGTTTCATCCGCCCTCCG 60.748 55.000 0.00 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.520039 CGCGAGCTCGTGCAATGAT 61.520 57.895 33.83 0.00 43.06 2.45
45 46 1.257750 ATAGCGCCAGTGACAGGTCA 61.258 55.000 2.29 0.00 37.24 4.02
46 47 1.257750 TAGCGCCAGTGACAGGTCAT 61.258 55.000 2.29 0.00 42.18 3.06
63 64 4.853142 TATCCGCTCTGGGCCGGT 62.853 66.667 13.14 0.00 38.76 5.28
109 110 3.440151 GCATGAATGCGGGCTGAT 58.560 55.556 0.00 0.00 44.67 2.90
110 111 1.737816 GCATGAATGCGGGCTGATT 59.262 52.632 0.00 0.00 44.67 2.57
111 112 0.103572 GCATGAATGCGGGCTGATTT 59.896 50.000 0.00 0.00 44.67 2.17
116 117 0.734889 AATGCGGGCTGATTTCTTCG 59.265 50.000 0.00 0.00 0.00 3.79
118 119 2.472909 GCGGGCTGATTTCTTCGGG 61.473 63.158 0.00 0.00 0.00 5.14
155 156 2.029623 CGAGGGAGAAGGGTTTCGATA 58.970 52.381 0.00 0.00 38.38 2.92
174 175 0.251341 AGGCCATGGTTGTTGGAGTC 60.251 55.000 14.67 0.00 36.26 3.36
177 178 2.620367 GGCCATGGTTGTTGGAGTCATA 60.620 50.000 14.67 0.00 36.26 2.15
178 179 2.423538 GCCATGGTTGTTGGAGTCATAC 59.576 50.000 14.67 0.00 36.26 2.39
179 180 3.684908 CCATGGTTGTTGGAGTCATACA 58.315 45.455 2.57 0.00 36.26 2.29
191 192 1.210478 AGTCATACATGGCAGTGGTCC 59.790 52.381 0.00 0.00 34.11 4.46
193 194 0.177836 CATACATGGCAGTGGTCCGA 59.822 55.000 0.00 0.00 0.00 4.55
194 195 0.908910 ATACATGGCAGTGGTCCGAA 59.091 50.000 0.00 0.00 0.00 4.30
209 210 3.747976 GAACGCCCGCAAAGCCAT 61.748 61.111 0.00 0.00 0.00 4.40
217 218 1.078214 CGCAAAGCCATCTCCCTCA 60.078 57.895 0.00 0.00 0.00 3.86
219 220 0.034670 GCAAAGCCATCTCCCTCAGT 60.035 55.000 0.00 0.00 0.00 3.41
257 258 2.814336 AGAAAAAGGACATCCGAACAGC 59.186 45.455 0.00 0.00 42.08 4.40
261 262 0.400213 AGGACATCCGAACAGCCAAA 59.600 50.000 0.00 0.00 42.08 3.28
262 263 0.521735 GGACATCCGAACAGCCAAAC 59.478 55.000 0.00 0.00 0.00 2.93
263 264 0.165944 GACATCCGAACAGCCAAACG 59.834 55.000 0.00 0.00 0.00 3.60
264 265 1.234615 ACATCCGAACAGCCAAACGG 61.235 55.000 0.00 0.00 45.61 4.44
266 267 3.739167 CCGAACAGCCAAACGGAA 58.261 55.556 0.00 0.00 46.94 4.30
268 269 0.040425 CCGAACAGCCAAACGGAAAG 60.040 55.000 0.00 0.00 46.94 2.62
269 270 0.941542 CGAACAGCCAAACGGAAAGA 59.058 50.000 0.00 0.00 0.00 2.52
270 271 1.535462 CGAACAGCCAAACGGAAAGAT 59.465 47.619 0.00 0.00 0.00 2.40
271 272 2.739913 CGAACAGCCAAACGGAAAGATA 59.260 45.455 0.00 0.00 0.00 1.98
272 273 3.374058 CGAACAGCCAAACGGAAAGATAT 59.626 43.478 0.00 0.00 0.00 1.63
273 274 4.569162 CGAACAGCCAAACGGAAAGATATA 59.431 41.667 0.00 0.00 0.00 0.86
274 275 5.064198 CGAACAGCCAAACGGAAAGATATAA 59.936 40.000 0.00 0.00 0.00 0.98
275 276 6.402766 CGAACAGCCAAACGGAAAGATATAAA 60.403 38.462 0.00 0.00 0.00 1.40
276 277 7.404671 AACAGCCAAACGGAAAGATATAAAT 57.595 32.000 0.00 0.00 0.00 1.40
277 278 7.027778 ACAGCCAAACGGAAAGATATAAATC 57.972 36.000 0.00 0.00 0.00 2.17
278 279 6.039382 ACAGCCAAACGGAAAGATATAAATCC 59.961 38.462 0.00 0.00 31.98 3.01
289 290 9.014297 GGAAAGATATAAATCCCGTTGAATGAT 57.986 33.333 0.00 0.00 31.98 2.45
307 308 2.031857 TGATAAAACACGTTTGGACCGC 60.032 45.455 0.00 0.00 32.36 5.68
323 324 2.875485 GCGCGGTCTAGACTGTCA 59.125 61.111 28.26 0.00 39.81 3.58
324 325 1.514443 GCGCGGTCTAGACTGTCAC 60.514 63.158 28.26 16.43 39.81 3.67
325 326 1.226046 CGCGGTCTAGACTGTCACG 60.226 63.158 28.26 20.59 39.81 4.35
329 330 1.534163 CGGTCTAGACTGTCACGTTGA 59.466 52.381 21.64 0.00 33.13 3.18
335 336 3.032017 AGACTGTCACGTTGAAGATGG 57.968 47.619 10.88 0.00 0.00 3.51
342 343 3.746492 GTCACGTTGAAGATGGCTTACTT 59.254 43.478 0.00 0.00 33.61 2.24
343 344 3.745975 TCACGTTGAAGATGGCTTACTTG 59.254 43.478 0.00 0.00 33.61 3.16
347 348 3.953712 TGAAGATGGCTTACTTGTCGA 57.046 42.857 0.00 0.00 33.61 4.20
413 432 2.886862 CAGACTCGATTCTGGCATCT 57.113 50.000 21.64 0.00 39.59 2.90
415 434 3.899734 CAGACTCGATTCTGGCATCTAG 58.100 50.000 21.64 0.00 39.59 2.43
416 435 3.317711 CAGACTCGATTCTGGCATCTAGT 59.682 47.826 21.64 0.00 39.59 2.57
418 437 4.037446 AGACTCGATTCTGGCATCTAGTTC 59.963 45.833 4.24 0.00 31.14 3.01
420 439 2.365617 TCGATTCTGGCATCTAGTTCCC 59.634 50.000 0.00 0.00 0.00 3.97
421 440 2.760374 GATTCTGGCATCTAGTTCCCG 58.240 52.381 0.00 0.00 0.00 5.14
422 441 0.830648 TTCTGGCATCTAGTTCCCGG 59.169 55.000 0.00 0.00 0.00 5.73
434 474 3.537961 TTCCCGGGGCAAGCCAATT 62.538 57.895 23.50 0.00 37.98 2.32
436 476 1.684049 CCCGGGGCAAGCCAATTAA 60.684 57.895 14.71 0.00 37.98 1.40
437 477 1.675720 CCCGGGGCAAGCCAATTAAG 61.676 60.000 14.71 0.00 37.98 1.85
439 479 1.522092 GGGGCAAGCCAATTAAGCC 59.478 57.895 13.87 0.00 44.48 4.35
441 481 1.604147 GGGCAAGCCAATTAAGCCGT 61.604 55.000 13.87 0.00 46.12 5.68
506 546 0.819259 GTCAGCTTGGACCACAGCAA 60.819 55.000 22.53 12.40 0.00 3.91
507 547 0.106769 TCAGCTTGGACCACAGCAAA 60.107 50.000 22.53 12.15 0.00 3.68
528 568 0.462759 AGCAGGCCTATTTCACTCGC 60.463 55.000 3.98 0.19 0.00 5.03
530 570 0.815615 CAGGCCTATTTCACTCGCCC 60.816 60.000 3.98 0.00 40.65 6.13
531 571 1.223487 GGCCTATTTCACTCGCCCA 59.777 57.895 0.00 0.00 33.30 5.36
532 572 0.179018 GGCCTATTTCACTCGCCCAT 60.179 55.000 0.00 0.00 33.30 4.00
533 573 1.230324 GCCTATTTCACTCGCCCATC 58.770 55.000 0.00 0.00 0.00 3.51
534 574 1.502231 CCTATTTCACTCGCCCATCG 58.498 55.000 0.00 0.00 40.15 3.84
535 575 1.202533 CCTATTTCACTCGCCCATCGT 60.203 52.381 0.00 0.00 39.67 3.73
536 576 2.128035 CTATTTCACTCGCCCATCGTC 58.872 52.381 0.00 0.00 39.67 4.20
588 632 1.617755 CGCTCGCTTTCGCTTTCTCA 61.618 55.000 0.00 0.00 35.26 3.27
649 693 2.904866 CTCGCTCTCCTCCCCTCG 60.905 72.222 0.00 0.00 0.00 4.63
652 696 4.851214 GCTCTCCTCCCCTCGCCT 62.851 72.222 0.00 0.00 0.00 5.52
755 813 1.721926 CGACGACAAGAAAAGAGAGCC 59.278 52.381 0.00 0.00 0.00 4.70
791 867 2.325393 ATAAAAGGCGCGAGGGAGGG 62.325 60.000 12.10 0.00 0.00 4.30
916 993 2.664081 CCACTCTCTCCAGGGCCAC 61.664 68.421 6.18 0.00 0.00 5.01
917 994 1.915266 CACTCTCTCCAGGGCCACA 60.915 63.158 6.18 0.00 0.00 4.17
918 995 1.915769 ACTCTCTCCAGGGCCACAC 60.916 63.158 6.18 0.00 0.00 3.82
1446 1564 4.144727 TCCCTCTCCTCCGCCTCC 62.145 72.222 0.00 0.00 0.00 4.30
1755 1873 1.001860 GAGCAGCAGTGGAAGAAGACT 59.998 52.381 0.00 0.00 0.00 3.24
1756 1874 1.001860 AGCAGCAGTGGAAGAAGACTC 59.998 52.381 0.00 0.00 0.00 3.36
1809 1931 2.405191 GCCGCTCGCTCCAAATTC 59.595 61.111 0.00 0.00 0.00 2.17
1827 1949 1.003718 CCCGACTTTTTCCGCCTCT 60.004 57.895 0.00 0.00 0.00 3.69
1912 2034 0.601046 CACACAGCGGTCACATCACT 60.601 55.000 0.00 0.00 0.00 3.41
1918 2040 0.249073 GCGGTCACATCACTAGCGAT 60.249 55.000 0.00 0.00 36.28 4.58
1996 2118 8.335356 GCTTTTGATTTGATGATCATTTCCATG 58.665 33.333 10.14 0.00 36.05 3.66
2173 2296 7.255381 GCAAATATCATCTGCTACATGAAACCT 60.255 37.037 0.00 0.00 33.94 3.50
2196 2319 0.596083 CTGATTAGCAGCGTCCTCGG 60.596 60.000 0.00 0.00 37.90 4.63
2301 2424 4.895889 TCTCACATGGTTAGGATAGGAGTG 59.104 45.833 0.00 0.00 0.00 3.51
2406 2534 1.113788 ATGGAGCTCTCACTCTCAGC 58.886 55.000 14.64 0.00 36.87 4.26
2410 2538 1.031571 AGCTCTCACTCTCAGCCTCG 61.032 60.000 0.00 0.00 33.28 4.63
2412 2540 0.679640 CTCTCACTCTCAGCCTCGGT 60.680 60.000 0.00 0.00 0.00 4.69
2414 2542 1.987704 CTCACTCTCAGCCTCGGTCG 61.988 65.000 0.00 0.00 0.00 4.79
2440 2569 0.235926 GCGAACTTGCTTGTCTGACC 59.764 55.000 5.17 0.00 0.00 4.02
2521 2650 4.082081 TCACATCCACATGAAATCCAAAGC 60.082 41.667 0.00 0.00 33.72 3.51
2522 2651 4.081862 CACATCCACATGAAATCCAAAGCT 60.082 41.667 0.00 0.00 33.72 3.74
2523 2652 5.125900 CACATCCACATGAAATCCAAAGCTA 59.874 40.000 0.00 0.00 33.72 3.32
2524 2653 5.359009 ACATCCACATGAAATCCAAAGCTAG 59.641 40.000 0.00 0.00 33.72 3.42
2537 2666 3.195698 GCTAGCTCCCGGCAAACG 61.196 66.667 7.70 0.00 44.79 3.60
2628 2764 6.641314 CCGTACTTACTAATCCAGCTACAATG 59.359 42.308 0.00 0.00 0.00 2.82
2638 2774 3.449018 TCCAGCTACAATGAACCTCTCTC 59.551 47.826 0.00 0.00 0.00 3.20
2795 2940 0.672342 GGTGCATCAAGGGCATGATC 59.328 55.000 0.00 0.00 44.11 2.92
3036 3184 3.504520 CCTGCACCCGTAAGTTGTTTTAT 59.495 43.478 0.00 0.00 0.00 1.40
3122 3274 2.953466 ATGTGTCTTTGCATGATGGC 57.047 45.000 0.00 0.00 0.00 4.40
3213 3365 2.480419 GTCGAAATCATTAGGATGGCCG 59.520 50.000 0.00 0.00 39.96 6.13
3222 3386 2.104572 TAGGATGGCCGAGCATGAGC 62.105 60.000 0.00 0.00 39.96 4.26
3299 3463 7.969536 TCTATTGGATTGCAGCTAATAAGAC 57.030 36.000 0.00 0.00 0.00 3.01
3329 3493 5.526111 GTCACAGCTTTTAGGACTTTGTGTA 59.474 40.000 0.00 0.00 36.67 2.90
3389 3553 3.261643 GGGTCCTCCATTTTGCATCTTTT 59.738 43.478 0.00 0.00 35.00 2.27
3390 3554 4.498241 GGTCCTCCATTTTGCATCTTTTC 58.502 43.478 0.00 0.00 0.00 2.29
3392 3556 5.279657 GGTCCTCCATTTTGCATCTTTTCTT 60.280 40.000 0.00 0.00 0.00 2.52
3393 3557 6.071391 GGTCCTCCATTTTGCATCTTTTCTTA 60.071 38.462 0.00 0.00 0.00 2.10
3394 3558 7.031975 GTCCTCCATTTTGCATCTTTTCTTAG 58.968 38.462 0.00 0.00 0.00 2.18
3395 3559 6.947733 TCCTCCATTTTGCATCTTTTCTTAGA 59.052 34.615 0.00 0.00 0.00 2.10
3396 3560 7.616935 TCCTCCATTTTGCATCTTTTCTTAGAT 59.383 33.333 0.00 0.00 35.26 1.98
3398 3562 9.298774 CTCCATTTTGCATCTTTTCTTAGATTC 57.701 33.333 0.00 0.00 32.60 2.52
3399 3563 8.805175 TCCATTTTGCATCTTTTCTTAGATTCA 58.195 29.630 0.00 0.00 32.60 2.57
3400 3564 9.084164 CCATTTTGCATCTTTTCTTAGATTCAG 57.916 33.333 0.00 0.00 31.19 3.02
3401 3565 9.850628 CATTTTGCATCTTTTCTTAGATTCAGA 57.149 29.630 0.00 0.00 31.19 3.27
3402 3566 9.852091 ATTTTGCATCTTTTCTTAGATTCAGAC 57.148 29.630 0.00 0.00 31.19 3.51
3403 3567 7.984422 TTGCATCTTTTCTTAGATTCAGACA 57.016 32.000 0.00 0.00 31.19 3.41
3406 3570 9.671279 TGCATCTTTTCTTAGATTCAGACATTA 57.329 29.630 0.00 0.00 32.60 1.90
3435 3599 9.256228 TGACTTTCTAACTATCATTAGGTGAGT 57.744 33.333 0.00 0.00 40.92 3.41
3461 3625 2.525105 ATGGATTTGGTTAGGGCGTT 57.475 45.000 0.00 0.00 0.00 4.84
3468 3632 5.449999 GGATTTGGTTAGGGCGTTCAATTAG 60.450 44.000 0.00 0.00 0.00 1.73
3472 3636 3.754850 GGTTAGGGCGTTCAATTAGTTGT 59.245 43.478 0.00 0.00 36.69 3.32
3473 3637 4.937015 GGTTAGGGCGTTCAATTAGTTGTA 59.063 41.667 0.00 0.00 36.69 2.41
3549 3713 4.856509 ACTTCTAATCCAGTTTTAGGGGC 58.143 43.478 0.00 0.00 0.00 5.80
3559 3723 2.200923 TTTTAGGGGCGCACCTACCC 62.201 60.000 37.74 23.87 42.63 3.69
3671 3838 2.577606 TGGTGGTTACATCAGGGTTG 57.422 50.000 0.00 0.00 31.38 3.77
3672 3839 2.058705 TGGTGGTTACATCAGGGTTGA 58.941 47.619 0.00 0.00 31.38 3.18
3673 3840 2.647299 TGGTGGTTACATCAGGGTTGAT 59.353 45.455 0.00 0.00 44.87 2.57
3674 3841 3.075283 TGGTGGTTACATCAGGGTTGATT 59.925 43.478 0.00 0.00 42.12 2.57
3675 3842 3.443681 GGTGGTTACATCAGGGTTGATTG 59.556 47.826 0.00 0.00 42.12 2.67
3676 3843 3.443681 GTGGTTACATCAGGGTTGATTGG 59.556 47.826 0.00 0.00 42.12 3.16
3677 3844 3.075283 TGGTTACATCAGGGTTGATTGGT 59.925 43.478 0.00 0.00 42.12 3.67
3678 3845 3.443681 GGTTACATCAGGGTTGATTGGTG 59.556 47.826 0.00 0.00 42.12 4.17
3679 3846 1.549203 ACATCAGGGTTGATTGGTGC 58.451 50.000 0.00 0.00 42.12 5.01
3680 3847 1.203038 ACATCAGGGTTGATTGGTGCA 60.203 47.619 0.00 0.00 42.12 4.57
3681 3848 1.894466 CATCAGGGTTGATTGGTGCAA 59.106 47.619 0.00 0.00 42.12 4.08
3682 3849 2.307496 TCAGGGTTGATTGGTGCAAT 57.693 45.000 0.00 0.00 36.72 3.56
3683 3850 1.894466 TCAGGGTTGATTGGTGCAATG 59.106 47.619 0.00 0.00 33.90 2.82
3684 3851 1.619827 CAGGGTTGATTGGTGCAATGT 59.380 47.619 0.00 0.00 33.90 2.71
3685 3852 2.037511 CAGGGTTGATTGGTGCAATGTT 59.962 45.455 0.00 0.00 33.90 2.71
3686 3853 3.257873 CAGGGTTGATTGGTGCAATGTTA 59.742 43.478 0.00 0.00 33.90 2.41
3687 3854 3.511146 AGGGTTGATTGGTGCAATGTTAG 59.489 43.478 0.00 0.00 33.90 2.34
3688 3855 3.253230 GGTTGATTGGTGCAATGTTAGC 58.747 45.455 0.00 0.00 33.90 3.09
3689 3856 3.305950 GGTTGATTGGTGCAATGTTAGCA 60.306 43.478 0.00 0.00 40.19 3.49
3690 3857 4.497300 GTTGATTGGTGCAATGTTAGCAT 58.503 39.130 0.00 0.00 44.79 3.79
3691 3858 5.394005 GGTTGATTGGTGCAATGTTAGCATA 60.394 40.000 0.00 0.00 44.79 3.14
3692 3859 6.275335 GTTGATTGGTGCAATGTTAGCATAT 58.725 36.000 0.00 0.00 44.79 1.78
3693 3860 6.468333 TGATTGGTGCAATGTTAGCATATT 57.532 33.333 0.00 0.00 44.79 1.28
3694 3861 6.506147 TGATTGGTGCAATGTTAGCATATTC 58.494 36.000 0.00 0.00 44.79 1.75
3695 3862 5.911378 TTGGTGCAATGTTAGCATATTCA 57.089 34.783 0.00 0.00 44.79 2.57
3696 3863 5.503662 TGGTGCAATGTTAGCATATTCAG 57.496 39.130 0.00 0.00 44.79 3.02
3697 3864 4.949238 TGGTGCAATGTTAGCATATTCAGT 59.051 37.500 0.00 0.00 44.79 3.41
3698 3865 5.066375 TGGTGCAATGTTAGCATATTCAGTC 59.934 40.000 0.00 0.00 44.79 3.51
3699 3866 5.200454 GTGCAATGTTAGCATATTCAGTCG 58.800 41.667 0.00 0.00 44.79 4.18
3700 3867 4.875536 TGCAATGTTAGCATATTCAGTCGT 59.124 37.500 0.00 0.00 37.02 4.34
3701 3868 5.353956 TGCAATGTTAGCATATTCAGTCGTT 59.646 36.000 0.00 0.00 37.02 3.85
3702 3869 5.678483 GCAATGTTAGCATATTCAGTCGTTG 59.322 40.000 0.00 0.00 34.39 4.10
3703 3870 6.675486 GCAATGTTAGCATATTCAGTCGTTGT 60.675 38.462 0.00 0.00 34.39 3.32
3704 3871 6.985188 ATGTTAGCATATTCAGTCGTTGTT 57.015 33.333 0.00 0.00 32.73 2.83
3705 3872 6.403333 TGTTAGCATATTCAGTCGTTGTTC 57.597 37.500 0.00 0.00 0.00 3.18
3706 3873 5.929415 TGTTAGCATATTCAGTCGTTGTTCA 59.071 36.000 0.00 0.00 0.00 3.18
3707 3874 6.593770 TGTTAGCATATTCAGTCGTTGTTCAT 59.406 34.615 0.00 0.00 0.00 2.57
3708 3875 7.119116 TGTTAGCATATTCAGTCGTTGTTCATT 59.881 33.333 0.00 0.00 0.00 2.57
3709 3876 8.600625 GTTAGCATATTCAGTCGTTGTTCATTA 58.399 33.333 0.00 0.00 0.00 1.90
3710 3877 7.792374 AGCATATTCAGTCGTTGTTCATTAT 57.208 32.000 0.00 0.00 0.00 1.28
3711 3878 8.887036 AGCATATTCAGTCGTTGTTCATTATA 57.113 30.769 0.00 0.00 0.00 0.98
3712 3879 9.325198 AGCATATTCAGTCGTTGTTCATTATAA 57.675 29.630 0.00 0.00 0.00 0.98
3713 3880 9.370126 GCATATTCAGTCGTTGTTCATTATAAC 57.630 33.333 0.00 0.00 0.00 1.89
3748 3915 7.578310 CAGATATCTGGTTTTTCCATGATGT 57.422 36.000 22.89 0.00 46.12 3.06
3749 3916 8.681486 CAGATATCTGGTTTTTCCATGATGTA 57.319 34.615 22.89 0.00 46.12 2.29
3750 3917 9.293404 CAGATATCTGGTTTTTCCATGATGTAT 57.707 33.333 22.89 0.00 46.12 2.29
3751 3918 9.293404 AGATATCTGGTTTTTCCATGATGTATG 57.707 33.333 3.89 0.00 46.12 2.39
3752 3919 9.288576 GATATCTGGTTTTTCCATGATGTATGA 57.711 33.333 0.00 0.00 46.12 2.15
3753 3920 6.757897 TCTGGTTTTTCCATGATGTATGAC 57.242 37.500 0.00 0.00 46.12 3.06
3754 3921 5.652014 TCTGGTTTTTCCATGATGTATGACC 59.348 40.000 0.00 0.00 46.12 4.02
3755 3922 5.579047 TGGTTTTTCCATGATGTATGACCT 58.421 37.500 0.00 0.00 41.93 3.85
3756 3923 5.418524 TGGTTTTTCCATGATGTATGACCTG 59.581 40.000 0.00 0.00 41.93 4.00
3757 3924 5.163519 GGTTTTTCCATGATGTATGACCTGG 60.164 44.000 0.00 0.00 39.21 4.45
3758 3925 4.860802 TTTCCATGATGTATGACCTGGT 57.139 40.909 0.00 0.00 39.21 4.00
3759 3926 3.843893 TCCATGATGTATGACCTGGTG 57.156 47.619 2.82 0.00 39.21 4.17
3760 3927 2.439135 TCCATGATGTATGACCTGGTGG 59.561 50.000 2.82 0.00 39.21 4.61
3942 4110 9.696917 AGAAAAGGTTGATAATTGTCAATTCAC 57.303 29.630 18.96 8.25 39.99 3.18
3951 4119 8.020819 TGATAATTGTCAATTCACGTCCTTTTC 58.979 33.333 14.07 0.00 32.38 2.29
3980 4148 2.428171 CCCACACCAATCAATGCTTAGG 59.572 50.000 0.00 0.00 0.00 2.69
4029 4197 2.103263 CCTACTTGGATGGTGCTAGACC 59.897 54.545 0.00 0.00 41.24 3.85
4041 4209 4.501071 GGTGCTAGACCGATTAGAAACAA 58.499 43.478 0.00 0.00 34.02 2.83
4081 4249 3.866883 ATTTTTGGTATGTCGCTTGGG 57.133 42.857 0.00 0.00 0.00 4.12
4143 4315 4.883585 CAGGCATCCTAGCACAAGAATTTA 59.116 41.667 0.00 0.00 35.83 1.40
4329 4595 7.751768 AAGAAATTCTCTAAGACCACCAAAG 57.248 36.000 0.00 0.00 32.46 2.77
4345 4611 4.842531 CCAAAGCCTTTATTTTGGGGAT 57.157 40.909 7.86 0.00 46.08 3.85
4364 4630 2.154854 TATGCTGCTCGGACTTATGC 57.845 50.000 0.00 0.00 0.00 3.14
4373 4639 4.119862 GCTCGGACTTATGCATGTTAAGA 58.880 43.478 10.16 1.15 32.25 2.10
4387 4653 8.846943 TGCATGTTAAGACTGAATAAAGAGAA 57.153 30.769 0.00 0.00 0.00 2.87
4388 4654 8.939929 TGCATGTTAAGACTGAATAAAGAGAAG 58.060 33.333 0.00 0.00 0.00 2.85
4438 4704 4.025480 GGCTTGTTTTGCACTCATTTTCTG 60.025 41.667 0.00 0.00 0.00 3.02
4470 4736 6.541907 TGGGCAATCTCATATAATAGTTGCA 58.458 36.000 9.06 0.00 41.47 4.08
4474 4740 6.971184 GCAATCTCATATAATAGTTGCATGCC 59.029 38.462 16.68 0.00 39.96 4.40
4479 4745 5.994668 TCATATAATAGTTGCATGCCGAACA 59.005 36.000 16.68 5.51 0.00 3.18
4498 4772 8.443937 GCCGAACATCTTTATGATCTTTATACC 58.556 37.037 0.00 0.00 33.83 2.73
4514 4788 8.909423 TCTTTATACCCATTTCCCTTTTGAAT 57.091 30.769 0.00 0.00 0.00 2.57
4535 4813 8.310406 TGAATGTGTTACAATCAAGAGTACTG 57.690 34.615 0.00 0.00 35.30 2.74
4536 4814 6.727824 ATGTGTTACAATCAAGAGTACTGC 57.272 37.500 0.00 0.00 0.00 4.40
4537 4815 5.606505 TGTGTTACAATCAAGAGTACTGCA 58.393 37.500 0.00 0.00 0.00 4.41
4538 4816 6.230472 TGTGTTACAATCAAGAGTACTGCAT 58.770 36.000 0.00 0.00 0.00 3.96
4558 4836 6.010294 GCATGCTGCATTAGTCTGATATTT 57.990 37.500 13.38 0.00 44.26 1.40
4559 4837 6.444633 GCATGCTGCATTAGTCTGATATTTT 58.555 36.000 13.38 0.00 44.26 1.82
4588 4866 3.460857 CCTTGCAGGTATCCTACTGAC 57.539 52.381 0.00 0.00 36.86 3.51
4662 4940 1.027357 AGCAAAGCTGGTCACTGTTG 58.973 50.000 0.00 0.00 37.57 3.33
4719 4997 6.071051 GGTTGACATGTTGGGTTAATAATGGT 60.071 38.462 0.00 0.00 0.00 3.55
5104 5382 4.039092 CTGCCCTCCCACCACCAG 62.039 72.222 0.00 0.00 0.00 4.00
5296 5580 3.691342 TTCGGGCTGGAGGACGTG 61.691 66.667 0.00 0.00 0.00 4.49
5399 5683 1.560292 GATTTCGTCGGCTGATCGC 59.440 57.895 0.00 1.55 38.13 4.58
5444 5728 1.001020 TCCCCGCTGATGCACATTT 60.001 52.632 0.00 0.00 39.64 2.32
5495 5780 8.927675 ACTAGTATGCTAGGATGGTATATAGC 57.072 38.462 20.28 4.94 46.81 2.97
5525 5810 0.955428 TCACAATCACTTGGCGGCTC 60.955 55.000 11.43 0.00 36.64 4.70
5549 5834 1.338020 TCCATGATCGGTCGACATGAG 59.662 52.381 18.91 17.58 42.41 2.90
5565 5850 0.108804 TGAGCACGGTCGATTCCTTC 60.109 55.000 0.00 0.00 0.00 3.46
5588 5873 0.098728 GGGCGGATGAAACATTGACG 59.901 55.000 0.00 0.00 0.00 4.35
5607 5894 1.789523 GTGCCCTCTCCCATGTACTA 58.210 55.000 0.00 0.00 0.00 1.82
5673 6154 3.127721 GGGCTACACAGAGCTTGAAAATC 59.872 47.826 0.00 0.00 42.43 2.17
5691 6172 1.104577 TCACCTTGTTCCAAACGGCC 61.105 55.000 0.00 0.00 0.00 6.13
5693 6174 0.822121 ACCTTGTTCCAAACGGCCTC 60.822 55.000 0.00 0.00 0.00 4.70
5716 6200 1.457346 GTCTCCTGCCATTTGTCCTG 58.543 55.000 0.00 0.00 0.00 3.86
5740 6224 3.573967 AGCTTTTGGATTAACCTGTGGTG 59.426 43.478 0.00 0.00 35.34 4.17
5743 6227 5.622233 GCTTTTGGATTAACCTGTGGTGATC 60.622 44.000 0.00 0.00 35.34 2.92
5754 6238 3.446161 CCTGTGGTGATCAATGAAATGCT 59.554 43.478 0.00 0.00 0.00 3.79
5777 6261 1.228521 TGTGTTCCCACATGGCCAG 60.229 57.895 13.05 6.08 46.45 4.85
5813 6297 5.596845 TCTTGTTTATGCCCAAAAGTGTTC 58.403 37.500 0.00 0.00 0.00 3.18
5814 6298 3.971150 TGTTTATGCCCAAAAGTGTTCG 58.029 40.909 0.00 0.00 0.00 3.95
5815 6299 3.632604 TGTTTATGCCCAAAAGTGTTCGA 59.367 39.130 0.00 0.00 0.00 3.71
5816 6300 4.226761 GTTTATGCCCAAAAGTGTTCGAG 58.773 43.478 0.00 0.00 0.00 4.04
5817 6301 2.270352 ATGCCCAAAAGTGTTCGAGA 57.730 45.000 0.00 0.00 0.00 4.04
5818 6302 2.270352 TGCCCAAAAGTGTTCGAGAT 57.730 45.000 0.00 0.00 0.00 2.75
5819 6303 2.151202 TGCCCAAAAGTGTTCGAGATC 58.849 47.619 0.00 0.00 0.00 2.75
5820 6304 1.128692 GCCCAAAAGTGTTCGAGATCG 59.871 52.381 0.00 0.00 41.45 3.69
5821 6305 1.128692 CCCAAAAGTGTTCGAGATCGC 59.871 52.381 0.00 0.00 39.60 4.58
5833 6320 1.534175 CGAGATCGCAGAGTTACCACC 60.534 57.143 0.00 0.00 43.63 4.61
5839 6326 2.829720 TCGCAGAGTTACCACCAGTATT 59.170 45.455 0.00 0.00 0.00 1.89
5840 6327 4.018490 TCGCAGAGTTACCACCAGTATTA 58.982 43.478 0.00 0.00 0.00 0.98
5841 6328 4.110482 CGCAGAGTTACCACCAGTATTAC 58.890 47.826 0.00 0.00 0.00 1.89
5868 6355 2.440409 ACTGCAGCTCCTTGTTTATGG 58.560 47.619 15.27 0.00 0.00 2.74
5891 6378 5.010213 GGCCAAAAGTTTTACCATCACTGTA 59.990 40.000 12.53 0.00 0.00 2.74
5907 6394 2.072298 CTGTACTGCAGCTCCTTGTTC 58.928 52.381 15.27 0.00 38.52 3.18
5913 6400 1.941999 GCAGCTCCTTGTTCATGCCC 61.942 60.000 0.00 0.00 0.00 5.36
5922 6409 3.070015 CCTTGTTCATGCCCAAAAGTTCT 59.930 43.478 0.00 0.00 0.00 3.01
5985 6472 5.336055 CGGTCTCTGTAGAATATGACCATCC 60.336 48.000 14.59 0.00 42.74 3.51
5989 6476 5.087323 TCTGTAGAATATGACCATCCTCCC 58.913 45.833 0.00 0.00 0.00 4.30
5993 6480 0.473694 ATATGACCATCCTCCCGCCA 60.474 55.000 0.00 0.00 0.00 5.69
5998 6485 1.146263 CCATCCTCCCGCCAGTTAC 59.854 63.158 0.00 0.00 0.00 2.50
6014 6501 2.928116 AGTTACGTTAGCCTTTCGATGC 59.072 45.455 0.00 0.00 0.00 3.91
6015 6502 1.930567 TACGTTAGCCTTTCGATGCC 58.069 50.000 0.00 0.00 0.00 4.40
6173 6661 0.893727 ATTTGGACGCCTGTTGACCC 60.894 55.000 0.00 0.00 0.00 4.46
6195 6683 2.869503 AATTGGCCCCGTCACGCTAG 62.870 60.000 0.00 0.00 0.00 3.42
6257 6745 1.486211 ACCCTTTCGATCACGGATCT 58.514 50.000 10.77 0.00 36.96 2.75
6258 6746 1.137086 ACCCTTTCGATCACGGATCTG 59.863 52.381 0.00 0.00 36.96 2.90
6271 6759 1.201921 CGGATCTGCGCACTAAACAAC 60.202 52.381 5.66 0.00 0.00 3.32
6272 6760 1.130561 GGATCTGCGCACTAAACAACC 59.869 52.381 5.66 0.00 0.00 3.77
6348 6836 0.313987 TCAGTGTCGTGCTGTGTAGG 59.686 55.000 0.00 0.00 35.60 3.18
6355 6843 3.257375 TGTCGTGCTGTGTAGGAGTATTT 59.743 43.478 0.00 0.00 0.00 1.40
6356 6844 3.858238 GTCGTGCTGTGTAGGAGTATTTC 59.142 47.826 0.00 0.00 0.00 2.17
6357 6845 3.762288 TCGTGCTGTGTAGGAGTATTTCT 59.238 43.478 0.00 0.00 0.00 2.52
6358 6846 4.945543 TCGTGCTGTGTAGGAGTATTTCTA 59.054 41.667 0.00 0.00 0.00 2.10
6360 6848 5.915758 CGTGCTGTGTAGGAGTATTTCTATC 59.084 44.000 0.00 0.00 0.00 2.08
6361 6849 6.459710 CGTGCTGTGTAGGAGTATTTCTATCA 60.460 42.308 0.00 0.00 0.00 2.15
6362 6850 7.437748 GTGCTGTGTAGGAGTATTTCTATCAT 58.562 38.462 0.00 0.00 0.00 2.45
6364 6852 9.314133 TGCTGTGTAGGAGTATTTCTATCATAT 57.686 33.333 0.00 0.00 0.00 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.716864 GAGCTCGCGGACTAGGAC 59.283 66.667 6.13 0.00 0.00 3.85
1 2 2.895865 CGAGCTCGCGGACTAGGA 60.896 66.667 25.07 0.00 0.00 2.94
2 3 3.203412 ACGAGCTCGCGGACTAGG 61.203 66.667 34.83 6.98 44.43 3.02
3 4 2.023461 CACGAGCTCGCGGACTAG 59.977 66.667 34.83 12.71 44.43 2.57
4 5 4.175489 GCACGAGCTCGCGGACTA 62.175 66.667 34.83 0.00 44.43 2.59
7 8 4.435436 ATTGCACGAGCTCGCGGA 62.435 61.111 34.83 25.17 44.43 5.54
16 17 1.153469 TGGCGCTATCATTGCACGA 60.153 52.632 7.64 0.00 0.00 4.35
27 28 1.257750 ATGACCTGTCACTGGCGCTA 61.258 55.000 7.64 0.00 43.11 4.26
45 46 3.314331 CCGGCCCAGAGCGGATAT 61.314 66.667 0.00 0.00 44.26 1.63
46 47 4.853142 ACCGGCCCAGAGCGGATA 62.853 66.667 0.00 0.00 44.26 2.59
63 64 3.430862 GGCCGCTTCGCATTGACA 61.431 61.111 0.00 0.00 0.00 3.58
73 74 1.741770 CGCTTTAGAGTGGCCGCTT 60.742 57.895 22.22 12.82 0.00 4.68
96 97 1.268234 CGAAGAAATCAGCCCGCATTC 60.268 52.381 0.00 0.00 0.00 2.67
109 110 0.321298 CCCTTTCTCGCCCGAAGAAA 60.321 55.000 11.70 11.70 0.00 2.52
110 111 1.295423 CCCTTTCTCGCCCGAAGAA 59.705 57.895 0.00 0.00 0.00 2.52
111 112 2.978824 CCCTTTCTCGCCCGAAGA 59.021 61.111 0.00 0.00 0.00 2.87
134 135 1.218316 CGAAACCCTTCTCCCTCGG 59.782 63.158 0.00 0.00 0.00 4.63
144 145 0.474184 CCATGGCCTATCGAAACCCT 59.526 55.000 3.32 0.00 0.00 4.34
155 156 0.251341 GACTCCAACAACCATGGCCT 60.251 55.000 13.04 0.00 37.88 5.19
174 175 0.177836 TCGGACCACTGCCATGTATG 59.822 55.000 0.00 0.00 0.00 2.39
177 178 1.302511 GTTCGGACCACTGCCATGT 60.303 57.895 0.00 0.00 0.00 3.21
178 179 2.390599 CGTTCGGACCACTGCCATG 61.391 63.158 0.00 0.00 0.00 3.66
179 180 2.047274 CGTTCGGACCACTGCCAT 60.047 61.111 0.00 0.00 0.00 4.40
193 194 3.747976 GATGGCTTTGCGGGCGTT 61.748 61.111 0.00 0.00 34.31 4.84
194 195 4.722700 AGATGGCTTTGCGGGCGT 62.723 61.111 0.00 0.00 34.31 5.68
208 209 3.181443 ACCGAAAACAAACTGAGGGAGAT 60.181 43.478 0.00 0.00 0.00 2.75
209 210 2.171870 ACCGAAAACAAACTGAGGGAGA 59.828 45.455 0.00 0.00 0.00 3.71
217 218 5.799681 TTCTCGTAAACCGAAAACAAACT 57.200 34.783 0.00 0.00 46.75 2.66
219 220 6.527372 CCTTTTTCTCGTAAACCGAAAACAAA 59.473 34.615 0.00 0.00 46.75 2.83
238 239 1.886542 GGCTGTTCGGATGTCCTTTTT 59.113 47.619 0.00 0.00 0.00 1.94
243 244 0.521735 GTTTGGCTGTTCGGATGTCC 59.478 55.000 0.00 0.00 0.00 4.02
249 250 0.040425 CTTTCCGTTTGGCTGTTCGG 60.040 55.000 0.00 0.00 43.65 4.30
257 258 5.529800 ACGGGATTTATATCTTTCCGTTTGG 59.470 40.000 8.45 0.00 40.89 3.28
261 262 5.920903 TCAACGGGATTTATATCTTTCCGT 58.079 37.500 8.45 8.45 43.57 4.69
262 263 6.854496 TTCAACGGGATTTATATCTTTCCG 57.146 37.500 7.46 7.46 38.38 4.30
263 264 8.391075 TCATTCAACGGGATTTATATCTTTCC 57.609 34.615 0.00 0.00 0.00 3.13
271 272 7.913297 CGTGTTTTATCATTCAACGGGATTTAT 59.087 33.333 0.00 0.00 0.00 1.40
272 273 7.094720 ACGTGTTTTATCATTCAACGGGATTTA 60.095 33.333 0.00 0.00 0.00 1.40
273 274 6.090129 CGTGTTTTATCATTCAACGGGATTT 58.910 36.000 0.00 0.00 0.00 2.17
274 275 5.182380 ACGTGTTTTATCATTCAACGGGATT 59.818 36.000 0.00 0.00 0.00 3.01
275 276 4.698304 ACGTGTTTTATCATTCAACGGGAT 59.302 37.500 0.00 0.00 0.00 3.85
276 277 4.066490 ACGTGTTTTATCATTCAACGGGA 58.934 39.130 0.00 0.00 0.00 5.14
277 278 4.413495 ACGTGTTTTATCATTCAACGGG 57.587 40.909 0.00 0.00 0.00 5.28
278 279 5.116377 CCAAACGTGTTTTATCATTCAACGG 59.884 40.000 0.00 0.00 0.00 4.44
289 290 0.304098 CGCGGTCCAAACGTGTTTTA 59.696 50.000 0.00 0.00 37.10 1.52
307 308 1.226046 CGTGACAGTCTAGACCGCG 60.226 63.158 19.38 17.26 0.00 6.46
315 316 2.868044 GCCATCTTCAACGTGACAGTCT 60.868 50.000 1.31 0.00 0.00 3.24
319 320 2.254546 AAGCCATCTTCAACGTGACA 57.745 45.000 0.00 0.00 0.00 3.58
323 324 3.740115 ACAAGTAAGCCATCTTCAACGT 58.260 40.909 0.00 0.00 33.85 3.99
324 325 3.181530 CGACAAGTAAGCCATCTTCAACG 60.182 47.826 0.00 0.00 33.85 4.10
325 326 3.994392 TCGACAAGTAAGCCATCTTCAAC 59.006 43.478 0.00 0.00 33.85 3.18
329 330 3.678056 TGTCGACAAGTAAGCCATCTT 57.322 42.857 17.62 0.00 36.35 2.40
335 336 6.312918 TGGAGATTTTATGTCGACAAGTAAGC 59.687 38.462 24.13 17.70 0.00 3.09
342 343 3.056393 ACGGTGGAGATTTTATGTCGACA 60.056 43.478 22.48 22.48 33.83 4.35
343 344 3.518590 ACGGTGGAGATTTTATGTCGAC 58.481 45.455 9.11 9.11 31.87 4.20
347 348 6.001460 TCTTTTGACGGTGGAGATTTTATGT 58.999 36.000 0.00 0.00 0.00 2.29
400 419 2.760374 GGGAACTAGATGCCAGAATCG 58.240 52.381 5.63 0.00 0.00 3.34
403 422 0.830648 CCGGGAACTAGATGCCAGAA 59.169 55.000 11.12 0.00 0.00 3.02
412 431 2.124695 GCTTGCCCCGGGAACTAG 60.125 66.667 26.32 20.22 0.00 2.57
413 432 3.723922 GGCTTGCCCCGGGAACTA 61.724 66.667 26.32 9.90 0.00 2.24
415 434 4.986708 TTGGCTTGCCCCGGGAAC 62.987 66.667 26.32 15.04 0.00 3.62
416 435 2.156496 TAATTGGCTTGCCCCGGGAA 62.156 55.000 26.32 8.54 0.00 3.97
418 437 1.675720 CTTAATTGGCTTGCCCCGGG 61.676 60.000 15.80 15.80 0.00 5.73
420 439 1.141665 GCTTAATTGGCTTGCCCCG 59.858 57.895 9.35 0.00 0.00 5.73
421 440 1.522092 GGCTTAATTGGCTTGCCCC 59.478 57.895 9.35 0.00 37.81 5.80
422 441 1.141665 CGGCTTAATTGGCTTGCCC 59.858 57.895 9.35 0.00 40.40 5.36
506 546 2.716217 GAGTGAAATAGGCCTGCTGTT 58.284 47.619 17.99 3.38 0.00 3.16
507 547 1.406069 CGAGTGAAATAGGCCTGCTGT 60.406 52.381 17.99 0.00 0.00 4.40
528 568 0.528684 GAGCGAAAGAGGACGATGGG 60.529 60.000 0.00 0.00 0.00 4.00
530 570 0.528684 GGGAGCGAAAGAGGACGATG 60.529 60.000 0.00 0.00 0.00 3.84
531 571 0.684805 AGGGAGCGAAAGAGGACGAT 60.685 55.000 0.00 0.00 0.00 3.73
532 572 1.304217 AGGGAGCGAAAGAGGACGA 60.304 57.895 0.00 0.00 0.00 4.20
533 573 1.139947 GAGGGAGCGAAAGAGGACG 59.860 63.158 0.00 0.00 0.00 4.79
534 574 1.258445 TGGAGGGAGCGAAAGAGGAC 61.258 60.000 0.00 0.00 0.00 3.85
535 575 0.325671 ATGGAGGGAGCGAAAGAGGA 60.326 55.000 0.00 0.00 0.00 3.71
536 576 0.543749 AATGGAGGGAGCGAAAGAGG 59.456 55.000 0.00 0.00 0.00 3.69
588 632 2.778270 GAGGGGGAAGTGGTAATAAGCT 59.222 50.000 0.00 0.00 0.00 3.74
617 661 2.269241 GAGGCGGTGAAAGGGAGG 59.731 66.667 0.00 0.00 0.00 4.30
738 796 1.462670 GCTGGCTCTCTTTTCTTGTCG 59.537 52.381 0.00 0.00 0.00 4.35
755 813 1.507562 TATCTCTCTCTCGCTCGCTG 58.492 55.000 0.00 0.00 0.00 5.18
791 867 0.179234 GCTGTAGCCTTCCCTTCCTC 59.821 60.000 0.00 0.00 34.31 3.71
938 1027 2.124693 AGCGAGGTAGAGCAGGAGC 61.125 63.158 0.00 0.00 42.56 4.70
1056 1168 3.673484 ATGTGGCCGTTGTGCTGC 61.673 61.111 0.00 0.00 0.00 5.25
1057 1169 2.256158 CATGTGGCCGTTGTGCTG 59.744 61.111 0.00 0.00 0.00 4.41
1063 1175 2.598394 AAGCAGCATGTGGCCGTT 60.598 55.556 0.00 0.00 46.50 4.44
1275 1393 0.465097 CGTAGGAGTAGAAGGCCGGA 60.465 60.000 5.05 0.00 0.00 5.14
1809 1931 0.605589 AAGAGGCGGAAAAAGTCGGG 60.606 55.000 0.00 0.00 0.00 5.14
1884 2006 1.237285 ACCGCTGTGTGCAAGATTCC 61.237 55.000 0.00 0.00 43.06 3.01
1897 2019 1.142185 CGCTAGTGATGTGACCGCTG 61.142 60.000 0.00 0.00 0.00 5.18
1996 2118 1.466360 CGAGCAAATGTAACAGCAGCC 60.466 52.381 0.00 0.00 0.00 4.85
2058 2180 1.300853 GCAGCAAATTGTTGGGCGT 60.301 52.632 11.60 0.00 35.10 5.68
2173 2296 1.550524 AGGACGCTGCTAATCAGTTGA 59.449 47.619 0.00 0.00 44.66 3.18
2196 2319 1.447314 CCTACCGTCCCAAAGCGTC 60.447 63.158 0.00 0.00 0.00 5.19
2301 2424 2.817396 GCTGCGAGAGGGTCAAGC 60.817 66.667 0.00 0.00 0.00 4.01
2399 2527 3.408501 CTGCGACCGAGGCTGAGAG 62.409 68.421 0.00 0.00 0.00 3.20
2403 2531 2.103143 CTACTGCGACCGAGGCTG 59.897 66.667 0.00 0.00 35.72 4.85
2414 2542 0.166814 CAAGCAAGTTCGCCTACTGC 59.833 55.000 0.00 0.00 0.00 4.40
2440 2569 8.649973 AGAAGTAAGACGCCATTAATAAAGAG 57.350 34.615 0.00 0.00 0.00 2.85
2628 2764 3.018149 ACACCTACGATGAGAGAGGTTC 58.982 50.000 0.00 0.00 37.53 3.62
2638 2774 1.066858 ACCTCTTGCACACCTACGATG 60.067 52.381 0.00 0.00 0.00 3.84
3036 3184 7.513856 TGCCAATTACCATAAGCAGATAGTAA 58.486 34.615 0.00 0.00 0.00 2.24
3058 3206 1.202268 ACGTCGTCTAGTGCTAATGCC 60.202 52.381 0.00 0.00 38.71 4.40
3122 3274 5.379827 CAGCATAATCATGTTGATGTAGCG 58.620 41.667 3.52 0.00 43.86 4.26
3213 3365 0.179089 ACACTCCATCGCTCATGCTC 60.179 55.000 0.00 0.00 36.97 4.26
3222 3386 0.942252 CATGCCATGACACTCCATCG 59.058 55.000 0.00 0.00 0.00 3.84
3299 3463 4.113354 GTCCTAAAAGCTGTGACGGATAG 58.887 47.826 0.00 0.00 0.00 2.08
3329 3493 3.508402 TGATGATGTGCACAGCTCAAAAT 59.492 39.130 32.67 19.15 35.71 1.82
3395 3559 9.950496 AGTTAGAAAGTCATGTAATGTCTGAAT 57.050 29.630 0.00 0.00 46.80 2.57
3406 3570 9.823647 CACCTAATGATAGTTAGAAAGTCATGT 57.176 33.333 0.00 0.00 34.34 3.21
3435 3599 4.285863 CCCTAACCAAATCCATAAAGCCA 58.714 43.478 0.00 0.00 0.00 4.75
3473 3637 9.624697 CAGTGTATAACAAAACAAGCAACATAT 57.375 29.630 0.00 0.00 0.00 1.78
3549 3713 1.410004 TCTTCCTATGGGTAGGTGCG 58.590 55.000 1.85 0.00 46.43 5.34
3665 3832 2.014010 ACATTGCACCAATCAACCCT 57.986 45.000 0.00 0.00 31.05 4.34
3666 3833 2.837532 AACATTGCACCAATCAACCC 57.162 45.000 0.00 0.00 31.05 4.11
3667 3834 3.253230 GCTAACATTGCACCAATCAACC 58.747 45.455 0.00 0.00 31.05 3.77
3668 3835 3.911868 TGCTAACATTGCACCAATCAAC 58.088 40.909 0.00 0.00 35.31 3.18
3669 3836 4.804868 ATGCTAACATTGCACCAATCAA 57.195 36.364 0.00 0.00 43.59 2.57
3670 3837 6.096564 TGAATATGCTAACATTGCACCAATCA 59.903 34.615 0.00 0.00 43.59 2.57
3671 3838 6.506147 TGAATATGCTAACATTGCACCAATC 58.494 36.000 0.00 0.00 43.59 2.67
3672 3839 6.097270 ACTGAATATGCTAACATTGCACCAAT 59.903 34.615 0.00 0.00 43.59 3.16
3673 3840 5.418524 ACTGAATATGCTAACATTGCACCAA 59.581 36.000 0.00 0.00 43.59 3.67
3674 3841 4.949238 ACTGAATATGCTAACATTGCACCA 59.051 37.500 0.00 0.00 43.59 4.17
3675 3842 5.505173 ACTGAATATGCTAACATTGCACC 57.495 39.130 0.00 0.00 43.59 5.01
3676 3843 5.200454 CGACTGAATATGCTAACATTGCAC 58.800 41.667 0.00 0.00 43.59 4.57
3677 3844 4.875536 ACGACTGAATATGCTAACATTGCA 59.124 37.500 0.00 0.00 44.95 4.08
3678 3845 5.409643 ACGACTGAATATGCTAACATTGC 57.590 39.130 0.00 0.00 37.74 3.56
3679 3846 6.775088 ACAACGACTGAATATGCTAACATTG 58.225 36.000 0.00 0.00 37.74 2.82
3680 3847 6.985188 ACAACGACTGAATATGCTAACATT 57.015 33.333 0.00 0.00 37.74 2.71
3681 3848 6.593770 TGAACAACGACTGAATATGCTAACAT 59.406 34.615 0.00 0.00 40.49 2.71
3682 3849 5.929415 TGAACAACGACTGAATATGCTAACA 59.071 36.000 0.00 0.00 0.00 2.41
3683 3850 6.403333 TGAACAACGACTGAATATGCTAAC 57.597 37.500 0.00 0.00 0.00 2.34
3684 3851 7.609760 AATGAACAACGACTGAATATGCTAA 57.390 32.000 0.00 0.00 0.00 3.09
3685 3852 8.887036 ATAATGAACAACGACTGAATATGCTA 57.113 30.769 0.00 0.00 0.00 3.49
3686 3853 7.792374 ATAATGAACAACGACTGAATATGCT 57.208 32.000 0.00 0.00 0.00 3.79
3687 3854 9.370126 GTTATAATGAACAACGACTGAATATGC 57.630 33.333 0.00 0.00 0.00 3.14
3733 3900 5.163519 CCAGGTCATACATCATGGAAAAACC 60.164 44.000 0.00 0.00 37.66 3.27
3734 3901 5.418840 ACCAGGTCATACATCATGGAAAAAC 59.581 40.000 2.97 0.00 38.62 2.43
3735 3902 5.418524 CACCAGGTCATACATCATGGAAAAA 59.581 40.000 2.97 0.00 38.62 1.94
3736 3903 4.949238 CACCAGGTCATACATCATGGAAAA 59.051 41.667 2.97 0.00 38.62 2.29
3737 3904 4.525996 CACCAGGTCATACATCATGGAAA 58.474 43.478 2.97 0.00 38.62 3.13
3738 3905 3.117926 CCACCAGGTCATACATCATGGAA 60.118 47.826 2.97 0.00 38.62 3.53
3739 3906 2.439135 CCACCAGGTCATACATCATGGA 59.561 50.000 2.97 0.00 38.62 3.41
3740 3907 2.854963 CCACCAGGTCATACATCATGG 58.145 52.381 0.00 0.00 40.68 3.66
3754 3921 3.417069 TCAACCTGATGTAACCACCAG 57.583 47.619 0.00 0.00 0.00 4.00
3755 3922 4.078537 CAATCAACCTGATGTAACCACCA 58.921 43.478 0.00 0.00 37.15 4.17
3756 3923 3.443681 CCAATCAACCTGATGTAACCACC 59.556 47.826 0.00 0.00 37.15 4.61
3757 3924 4.079253 ACCAATCAACCTGATGTAACCAC 58.921 43.478 0.00 0.00 37.15 4.16
3758 3925 4.078537 CACCAATCAACCTGATGTAACCA 58.921 43.478 0.00 0.00 37.15 3.67
3759 3926 3.119495 GCACCAATCAACCTGATGTAACC 60.119 47.826 0.00 0.00 37.15 2.85
3760 3927 3.505680 TGCACCAATCAACCTGATGTAAC 59.494 43.478 0.00 0.00 37.15 2.50
3761 3928 3.760738 TGCACCAATCAACCTGATGTAA 58.239 40.909 0.00 0.00 37.15 2.41
3762 3929 3.431673 TGCACCAATCAACCTGATGTA 57.568 42.857 0.00 0.00 37.15 2.29
3763 3930 2.291209 TGCACCAATCAACCTGATGT 57.709 45.000 0.00 0.00 37.15 3.06
3764 3931 3.056393 ACATTGCACCAATCAACCTGATG 60.056 43.478 0.00 0.00 37.15 3.07
3765 3932 3.167485 ACATTGCACCAATCAACCTGAT 58.833 40.909 0.00 0.00 39.09 2.90
3766 3933 2.596346 ACATTGCACCAATCAACCTGA 58.404 42.857 0.00 0.00 31.05 3.86
3767 3934 3.389925 AACATTGCACCAATCAACCTG 57.610 42.857 0.00 0.00 31.05 4.00
3942 4110 1.076332 GGGATCACACGAAAAGGACG 58.924 55.000 0.00 0.00 0.00 4.79
3972 4140 6.241645 AGAAGAGCAAGTTAAACCTAAGCAT 58.758 36.000 0.00 0.00 0.00 3.79
4106 4278 4.016444 GGATGCCTGTCATGGTTCTTTTA 58.984 43.478 0.00 0.00 35.05 1.52
4110 4282 1.293062 AGGATGCCTGTCATGGTTCT 58.707 50.000 0.00 0.00 35.05 3.01
4111 4283 2.843701 CTAGGATGCCTGTCATGGTTC 58.156 52.381 0.00 0.00 35.05 3.62
4112 4284 1.133976 GCTAGGATGCCTGTCATGGTT 60.134 52.381 0.00 0.00 35.05 3.67
4113 4285 0.471617 GCTAGGATGCCTGTCATGGT 59.528 55.000 0.00 0.00 35.05 3.55
4164 4336 3.010420 CCTAGAAAACAAGCCAGGTAGC 58.990 50.000 0.00 0.00 0.00 3.58
4271 4537 1.259609 CCATCCATGCACACCACTTT 58.740 50.000 0.00 0.00 0.00 2.66
4272 4538 0.112995 ACCATCCATGCACACCACTT 59.887 50.000 0.00 0.00 0.00 3.16
4273 4539 0.609957 CACCATCCATGCACACCACT 60.610 55.000 0.00 0.00 0.00 4.00
4274 4540 1.885157 CACCATCCATGCACACCAC 59.115 57.895 0.00 0.00 0.00 4.16
4275 4541 1.978080 GCACCATCCATGCACACCA 60.978 57.895 0.00 0.00 42.88 4.17
4320 4586 3.072330 CCCAAAATAAAGGCTTTGGTGGT 59.928 43.478 22.32 0.00 46.82 4.16
4321 4587 3.558958 CCCCAAAATAAAGGCTTTGGTGG 60.559 47.826 22.32 20.00 46.82 4.61
4322 4588 3.326297 TCCCCAAAATAAAGGCTTTGGTG 59.674 43.478 22.32 13.28 46.82 4.17
4329 4595 4.800582 GCAGCATATCCCCAAAATAAAGGC 60.801 45.833 0.00 0.00 0.00 4.35
4344 4610 2.037641 TGCATAAGTCCGAGCAGCATAT 59.962 45.455 0.00 0.00 32.48 1.78
4345 4611 1.412343 TGCATAAGTCCGAGCAGCATA 59.588 47.619 0.00 0.00 32.48 3.14
4364 4630 8.939929 TGCTTCTCTTTATTCAGTCTTAACATG 58.060 33.333 0.00 0.00 0.00 3.21
4373 4639 5.879223 CCTGTCATGCTTCTCTTTATTCAGT 59.121 40.000 0.00 0.00 0.00 3.41
4385 4651 2.401766 CCGGTGCCTGTCATGCTTC 61.402 63.158 0.00 0.00 0.00 3.86
4438 4704 1.896220 TGAGATTGCCCAGTGTGAAC 58.104 50.000 0.00 0.00 0.00 3.18
4470 4736 6.949352 AAAGATCATAAAGATGTTCGGCAT 57.051 33.333 0.00 0.00 39.12 4.40
4474 4740 9.489084 TGGGTATAAAGATCATAAAGATGTTCG 57.511 33.333 0.00 0.00 39.12 3.95
4498 4772 6.520272 TGTAACACATTCAAAAGGGAAATGG 58.480 36.000 0.00 0.00 0.00 3.16
4502 4776 7.353414 TGATTGTAACACATTCAAAAGGGAA 57.647 32.000 2.34 0.00 36.08 3.97
4514 4788 5.606505 TGCAGTACTCTTGATTGTAACACA 58.393 37.500 0.00 0.00 0.00 3.72
4536 4814 6.861572 CCAAAATATCAGACTAATGCAGCATG 59.138 38.462 9.18 0.00 40.87 4.06
4537 4815 6.774170 TCCAAAATATCAGACTAATGCAGCAT 59.226 34.615 0.52 0.52 0.00 3.79
4538 4816 6.121590 TCCAAAATATCAGACTAATGCAGCA 58.878 36.000 0.00 0.00 0.00 4.41
4547 4825 7.363268 GCAAGGTTTCATCCAAAATATCAGACT 60.363 37.037 0.00 0.00 0.00 3.24
4585 4863 1.573932 CATTTGCTTGTCGCCGTCA 59.426 52.632 0.00 0.00 38.05 4.35
4662 4940 3.855689 ACAAAATGACATGCTAGTGGC 57.144 42.857 0.00 0.00 42.22 5.01
4719 4997 1.227527 CAGTTCGACACCTGCACCA 60.228 57.895 0.00 0.00 0.00 4.17
4912 5190 4.500116 GAGTCGCAGGGCTCGGAC 62.500 72.222 0.00 0.00 0.00 4.79
5099 5377 4.039357 GTGCTGCTGCTGCTGGTG 62.039 66.667 27.67 8.74 40.48 4.17
5444 5728 1.192757 GTGCGTGCGTACATTACAACA 59.807 47.619 4.09 0.00 0.00 3.33
5495 5780 6.090783 CCAAGTGATTGTGATGATTGACTTG 58.909 40.000 0.00 0.00 39.05 3.16
5525 5810 2.355126 CGACCGATCATGGAGCCG 60.355 66.667 0.00 0.00 0.00 5.52
5531 5816 1.135046 GCTCATGTCGACCGATCATG 58.865 55.000 14.12 19.22 39.87 3.07
5565 5850 0.748005 AATGTTTCATCCGCCCTCCG 60.748 55.000 0.00 0.00 0.00 4.63
5588 5873 1.789523 TAGTACATGGGAGAGGGCAC 58.210 55.000 0.00 0.00 0.00 5.01
5607 5894 6.178607 ACAGCCTTTTGAATTTTGGATCTT 57.821 33.333 0.00 0.00 0.00 2.40
5624 5911 2.362077 GTGTTTGAATGTTGGACAGCCT 59.638 45.455 0.00 0.00 34.31 4.58
5625 5912 2.545742 GGTGTTTGAATGTTGGACAGCC 60.546 50.000 0.00 0.00 33.85 4.85
5716 6200 3.193479 CCACAGGTTAATCCAAAAGCTCC 59.807 47.826 0.00 0.00 39.02 4.70
5740 6224 4.868171 ACACATGCAAGCATTTCATTGATC 59.132 37.500 4.52 0.00 33.90 2.92
5743 6227 4.142988 GGAACACATGCAAGCATTTCATTG 60.143 41.667 15.71 5.28 33.90 2.82
5813 6297 1.534175 GGTGGTAACTCTGCGATCTCG 60.534 57.143 0.00 0.00 39.28 4.04
5814 6298 1.476891 TGGTGGTAACTCTGCGATCTC 59.523 52.381 0.00 0.00 37.61 2.75
5815 6299 1.478510 CTGGTGGTAACTCTGCGATCT 59.521 52.381 0.00 0.00 37.61 2.75
5816 6300 1.204941 ACTGGTGGTAACTCTGCGATC 59.795 52.381 0.00 0.00 37.61 3.69
5817 6301 1.267121 ACTGGTGGTAACTCTGCGAT 58.733 50.000 0.00 0.00 37.61 4.58
5818 6302 1.913778 TACTGGTGGTAACTCTGCGA 58.086 50.000 0.00 0.00 37.61 5.10
5819 6303 2.961526 ATACTGGTGGTAACTCTGCG 57.038 50.000 0.00 0.00 33.74 5.18
5820 6304 5.340439 AGTAATACTGGTGGTAACTCTGC 57.660 43.478 0.00 0.00 33.74 4.26
5821 6305 7.481642 CAGTAGTAATACTGGTGGTAACTCTG 58.518 42.308 20.11 0.00 42.68 3.35
5868 6355 4.944048 ACAGTGATGGTAAAACTTTTGGC 58.056 39.130 0.00 0.00 0.00 4.52
5891 6378 1.531423 CATGAACAAGGAGCTGCAGT 58.469 50.000 16.64 2.32 0.00 4.40
5907 6394 6.156519 GGTAAAACTAGAACTTTTGGGCATG 58.843 40.000 0.00 0.00 0.00 4.06
5922 6409 3.685756 GCGGCACAGTAATGGTAAAACTA 59.314 43.478 0.00 0.00 0.00 2.24
5985 6472 0.804933 GCTAACGTAACTGGCGGGAG 60.805 60.000 0.00 0.00 0.00 4.30
5989 6476 1.392510 GAAAGGCTAACGTAACTGGCG 59.607 52.381 0.00 0.00 0.00 5.69
5993 6480 2.928116 GCATCGAAAGGCTAACGTAACT 59.072 45.455 11.70 0.00 0.00 2.24
5998 6485 1.299541 ATGGCATCGAAAGGCTAACG 58.700 50.000 14.31 6.87 0.00 3.18
6014 6501 4.142902 GCGGGTTTCGTTCATATCATATGG 60.143 45.833 4.76 0.00 41.72 2.74
6015 6502 4.690748 AGCGGGTTTCGTTCATATCATATG 59.309 41.667 0.00 0.00 41.72 1.78
6173 6661 1.817941 CGTGACGGGGCCAATTAGG 60.818 63.158 4.39 0.00 41.84 2.69
6195 6683 2.030805 GCCCCGATGATAGACAATTTGC 60.031 50.000 0.00 0.00 0.00 3.68
6257 6745 2.634777 GCGGTTGTTTAGTGCGCA 59.365 55.556 5.66 5.66 0.00 6.09
6258 6746 2.127003 GGCGGTTGTTTAGTGCGC 60.127 61.111 0.00 0.00 0.00 6.09
6272 6760 2.990967 ATTTGGGGCACTGTGGCG 60.991 61.111 25.26 0.00 44.78 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.