Multiple sequence alignment - TraesCS3A01G363000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G363000 chr3A 100.000 4298 0 0 1 4298 611699700 611703997 0.000000e+00 7938.0
1 TraesCS3A01G363000 chr3A 96.970 165 5 0 1602 1766 529671296 529671132 1.180000e-70 278.0
2 TraesCS3A01G363000 chr3B 90.700 2613 147 39 1764 4295 623149395 623151992 0.000000e+00 3391.0
3 TraesCS3A01G363000 chr3B 92.635 706 28 11 902 1603 623148712 623149397 0.000000e+00 994.0
4 TraesCS3A01G363000 chr3B 84.742 485 45 16 295 770 623147500 623147964 3.920000e-125 459.0
5 TraesCS3A01G363000 chr3B 95.402 174 8 0 1597 1770 409603933 409603760 1.180000e-70 278.0
6 TraesCS3A01G363000 chr3B 87.097 62 8 0 769 830 495120554 495120615 2.140000e-08 71.3
7 TraesCS3A01G363000 chr3D 87.118 2616 170 59 1764 4295 469153745 469156277 0.000000e+00 2809.0
8 TraesCS3A01G363000 chr3D 93.438 701 29 6 903 1603 469153064 469153747 0.000000e+00 1024.0
9 TraesCS3A01G363000 chr3D 88.333 480 51 4 295 770 469151992 469152470 4.820000e-159 571.0
10 TraesCS3A01G363000 chr5A 90.941 563 32 9 1044 1603 503647191 503647737 0.000000e+00 739.0
11 TraesCS3A01G363000 chr5A 98.802 167 2 0 1602 1768 367790077 367790243 9.040000e-77 298.0
12 TraesCS3A01G363000 chr5A 81.513 119 20 2 785 901 449015388 449015270 3.540000e-16 97.1
13 TraesCS3A01G363000 chr5A 90.476 63 4 2 769 830 367076223 367076284 9.910000e-12 82.4
14 TraesCS3A01G363000 chr2A 89.301 458 30 7 1139 1596 675938172 675938610 1.350000e-154 556.0
15 TraesCS3A01G363000 chr2A 86.402 353 18 13 1767 2092 675938620 675938969 4.090000e-95 359.0
16 TraesCS3A01G363000 chr7A 95.906 171 7 0 1598 1768 717441153 717441323 1.180000e-70 278.0
17 TraesCS3A01G363000 chr7A 91.525 59 4 1 769 826 32830573 32830515 3.560000e-11 80.5
18 TraesCS3A01G363000 chr7A 76.423 123 27 2 781 901 195549546 195549424 9.980000e-07 65.8
19 TraesCS3A01G363000 chr7A 100.000 28 0 0 268 295 573452839 573452866 8.000000e-03 52.8
20 TraesCS3A01G363000 chr2D 96.429 168 6 0 1600 1767 420278323 420278156 1.180000e-70 278.0
21 TraesCS3A01G363000 chr2D 100.000 30 0 0 268 297 277956775 277956746 6.000000e-04 56.5
22 TraesCS3A01G363000 chr7D 96.407 167 6 0 1602 1768 312574292 312574126 4.230000e-70 276.0
23 TraesCS3A01G363000 chr7D 87.879 66 8 0 779 844 27455146 27455211 1.280000e-10 78.7
24 TraesCS3A01G363000 chr7D 81.395 86 13 3 789 871 156005883 156005968 2.770000e-07 67.6
25 TraesCS3A01G363000 chr5D 95.882 170 7 0 1598 1767 210216900 210217069 4.230000e-70 276.0
26 TraesCS3A01G363000 chr5D 95.882 170 6 1 1602 1770 445106488 445106657 1.520000e-69 274.0
27 TraesCS3A01G363000 chr2B 95.402 174 7 1 1594 1767 121512220 121512048 4.230000e-70 276.0
28 TraesCS3A01G363000 chr4B 86.179 123 15 2 1338 1458 449014435 449014557 9.700000e-27 132.0
29 TraesCS3A01G363000 chr4D 85.484 124 16 2 1338 1459 363661723 363661846 1.250000e-25 128.0
30 TraesCS3A01G363000 chr4A 84.677 124 17 2 1338 1459 101759026 101758903 5.840000e-24 122.0
31 TraesCS3A01G363000 chr6B 93.750 48 3 0 781 828 656509072 656509025 5.960000e-09 73.1
32 TraesCS3A01G363000 chr6D 90.566 53 5 0 781 833 436420259 436420207 2.140000e-08 71.3
33 TraesCS3A01G363000 chr1B 78.788 99 19 2 802 898 398001358 398001456 9.980000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G363000 chr3A 611699700 611703997 4297 False 7938.000000 7938 100.000000 1 4298 1 chr3A.!!$F1 4297
1 TraesCS3A01G363000 chr3B 623147500 623151992 4492 False 1614.666667 3391 89.359000 295 4295 3 chr3B.!!$F2 4000
2 TraesCS3A01G363000 chr3D 469151992 469156277 4285 False 1468.000000 2809 89.629667 295 4295 3 chr3D.!!$F1 4000
3 TraesCS3A01G363000 chr5A 503647191 503647737 546 False 739.000000 739 90.941000 1044 1603 1 chr5A.!!$F3 559
4 TraesCS3A01G363000 chr2A 675938172 675938969 797 False 457.500000 556 87.851500 1139 2092 2 chr2A.!!$F1 953

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
185 186 0.109781 CGGTGGAAAAATGGTCGCTG 60.110 55.000 0.0 0.0 0.00 5.18 F
395 396 0.184933 TTATGGCCCCTCAAATCGGG 59.815 55.000 0.0 0.0 42.82 5.14 F
1461 2161 0.250124 TGCACCAGGTAGACAAACGG 60.250 55.000 0.0 0.0 0.00 4.44 F
1616 2316 1.006758 TCATGTACTCCCTCCGTTCCT 59.993 52.381 0.0 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1882 2590 0.325671 TTTTCCCCAAGCAACCACCA 60.326 50.0 0.00 0.00 0.00 4.17 R
2371 3104 0.813184 CGCCATGGCTCTTGTGAAAT 59.187 50.0 33.07 0.00 39.32 2.17 R
2523 3259 0.393077 AACTCCAGTTGTGTCCTCCG 59.607 55.0 0.00 0.00 36.80 4.63 R
3485 4225 0.249615 TGCAAGGCTGATAGCGCTAG 60.250 55.0 23.37 12.41 43.62 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.616156 TTTTTCATAAATTCATAGCATGGCATT 57.384 25.926 0.00 0.00 0.00 3.56
34 35 9.616156 TTTTCATAAATTCATAGCATGGCATTT 57.384 25.926 0.00 0.00 32.21 2.32
35 36 9.616156 TTTCATAAATTCATAGCATGGCATTTT 57.384 25.926 0.00 0.00 30.91 1.82
36 37 9.616156 TTCATAAATTCATAGCATGGCATTTTT 57.384 25.926 0.00 0.00 30.91 1.94
133 134 4.398549 TGAAAAACAACTAAGCGGATCG 57.601 40.909 0.00 0.00 0.00 3.69
134 135 4.059511 TGAAAAACAACTAAGCGGATCGA 58.940 39.130 0.00 0.00 0.00 3.59
135 136 4.084223 TGAAAAACAACTAAGCGGATCGAC 60.084 41.667 0.00 0.00 0.00 4.20
136 137 1.625616 AACAACTAAGCGGATCGACG 58.374 50.000 0.00 0.00 0.00 5.12
137 138 0.179145 ACAACTAAGCGGATCGACGG 60.179 55.000 0.00 0.00 0.00 4.79
138 139 0.870307 CAACTAAGCGGATCGACGGG 60.870 60.000 0.00 0.00 0.00 5.28
139 140 2.012902 AACTAAGCGGATCGACGGGG 62.013 60.000 0.00 0.00 0.00 5.73
140 141 2.124193 TAAGCGGATCGACGGGGA 60.124 61.111 0.00 0.00 0.00 4.81
141 142 1.524863 CTAAGCGGATCGACGGGGAT 61.525 60.000 0.00 0.00 0.00 3.85
142 143 1.521450 TAAGCGGATCGACGGGGATC 61.521 60.000 8.89 8.89 41.67 3.36
143 144 4.702081 GCGGATCGACGGGGATCG 62.702 72.222 10.59 0.00 43.00 3.69
144 145 4.702081 CGGATCGACGGGGATCGC 62.702 72.222 0.06 0.06 43.00 4.58
145 146 4.359455 GGATCGACGGGGATCGCC 62.359 72.222 18.68 18.68 43.00 5.54
161 162 4.517934 CCCCAGCCTGCCATCCAG 62.518 72.222 0.00 0.00 41.41 3.86
163 164 4.435970 CCAGCCTGCCATCCAGCA 62.436 66.667 0.00 0.00 40.36 4.41
169 170 3.321648 TGCCATCCAGCAGACGGT 61.322 61.111 0.00 0.00 38.00 4.83
170 171 2.821366 GCCATCCAGCAGACGGTG 60.821 66.667 0.00 0.00 40.44 4.94
178 179 2.336554 CAGCAGACGGTGGAAAAATG 57.663 50.000 0.00 0.00 36.97 2.32
179 180 1.068333 CAGCAGACGGTGGAAAAATGG 60.068 52.381 0.00 0.00 36.97 3.16
180 181 0.958822 GCAGACGGTGGAAAAATGGT 59.041 50.000 0.00 0.00 0.00 3.55
181 182 1.068541 GCAGACGGTGGAAAAATGGTC 60.069 52.381 0.00 0.00 0.00 4.02
182 183 1.196808 CAGACGGTGGAAAAATGGTCG 59.803 52.381 0.00 0.00 0.00 4.79
183 184 0.109919 GACGGTGGAAAAATGGTCGC 60.110 55.000 0.00 0.00 0.00 5.19
184 185 0.536460 ACGGTGGAAAAATGGTCGCT 60.536 50.000 0.00 0.00 0.00 4.93
185 186 0.109781 CGGTGGAAAAATGGTCGCTG 60.110 55.000 0.00 0.00 0.00 5.18
186 187 0.958822 GGTGGAAAAATGGTCGCTGT 59.041 50.000 0.00 0.00 0.00 4.40
187 188 1.335872 GGTGGAAAAATGGTCGCTGTG 60.336 52.381 0.00 0.00 0.00 3.66
188 189 0.313672 TGGAAAAATGGTCGCTGTGC 59.686 50.000 0.00 0.00 0.00 4.57
189 190 0.313672 GGAAAAATGGTCGCTGTGCA 59.686 50.000 0.00 0.00 0.00 4.57
190 191 1.666888 GGAAAAATGGTCGCTGTGCAG 60.667 52.381 0.00 0.00 0.00 4.41
191 192 0.314935 AAAAATGGTCGCTGTGCAGG 59.685 50.000 1.11 0.00 0.00 4.85
192 193 1.526575 AAAATGGTCGCTGTGCAGGG 61.527 55.000 9.59 9.59 42.08 4.45
193 194 3.925630 AATGGTCGCTGTGCAGGGG 62.926 63.158 14.75 0.00 41.19 4.79
212 213 2.597903 GGATCCTCCCCAGCAACC 59.402 66.667 3.84 0.00 0.00 3.77
213 214 2.190578 GATCCTCCCCAGCAACCG 59.809 66.667 0.00 0.00 0.00 4.44
214 215 3.406595 GATCCTCCCCAGCAACCGG 62.407 68.421 0.00 0.00 0.00 5.28
215 216 3.943137 ATCCTCCCCAGCAACCGGA 62.943 63.158 9.46 0.00 0.00 5.14
216 217 4.101448 CCTCCCCAGCAACCGGAG 62.101 72.222 9.46 0.15 42.48 4.63
238 239 4.999751 GAGTGAATCCAGTGAGACAAAC 57.000 45.455 0.00 0.00 0.00 2.93
239 240 3.744660 AGTGAATCCAGTGAGACAAACC 58.255 45.455 0.00 0.00 0.00 3.27
240 241 2.814336 GTGAATCCAGTGAGACAAACCC 59.186 50.000 0.00 0.00 0.00 4.11
241 242 2.441375 TGAATCCAGTGAGACAAACCCA 59.559 45.455 0.00 0.00 0.00 4.51
242 243 3.117701 TGAATCCAGTGAGACAAACCCAA 60.118 43.478 0.00 0.00 0.00 4.12
243 244 2.341846 TCCAGTGAGACAAACCCAAC 57.658 50.000 0.00 0.00 0.00 3.77
244 245 1.562008 TCCAGTGAGACAAACCCAACA 59.438 47.619 0.00 0.00 0.00 3.33
245 246 2.025793 TCCAGTGAGACAAACCCAACAA 60.026 45.455 0.00 0.00 0.00 2.83
246 247 2.099098 CCAGTGAGACAAACCCAACAAC 59.901 50.000 0.00 0.00 0.00 3.32
247 248 3.016736 CAGTGAGACAAACCCAACAACT 58.983 45.455 0.00 0.00 0.00 3.16
248 249 3.065371 CAGTGAGACAAACCCAACAACTC 59.935 47.826 0.00 0.00 0.00 3.01
249 250 3.013921 GTGAGACAAACCCAACAACTCA 58.986 45.455 0.00 0.00 0.00 3.41
250 251 3.442273 GTGAGACAAACCCAACAACTCAA 59.558 43.478 0.00 0.00 35.29 3.02
251 252 3.442273 TGAGACAAACCCAACAACTCAAC 59.558 43.478 0.00 0.00 31.51 3.18
252 253 3.694566 GAGACAAACCCAACAACTCAACT 59.305 43.478 0.00 0.00 0.00 3.16
253 254 4.850680 AGACAAACCCAACAACTCAACTA 58.149 39.130 0.00 0.00 0.00 2.24
254 255 4.881850 AGACAAACCCAACAACTCAACTAG 59.118 41.667 0.00 0.00 0.00 2.57
255 256 4.595986 ACAAACCCAACAACTCAACTAGT 58.404 39.130 0.00 0.00 41.49 2.57
268 269 6.422776 ACTCAACTAGTTAATTGATTGCCG 57.577 37.500 8.04 0.00 33.35 5.69
269 270 5.354234 ACTCAACTAGTTAATTGATTGCCGG 59.646 40.000 8.04 0.00 33.35 6.13
270 271 5.492895 TCAACTAGTTAATTGATTGCCGGA 58.507 37.500 5.05 0.00 29.89 5.14
271 272 5.353123 TCAACTAGTTAATTGATTGCCGGAC 59.647 40.000 5.05 0.00 29.89 4.79
272 273 3.869246 ACTAGTTAATTGATTGCCGGACG 59.131 43.478 5.05 0.00 0.00 4.79
273 274 2.014128 AGTTAATTGATTGCCGGACGG 58.986 47.619 5.05 6.35 38.57 4.79
274 275 1.064952 GTTAATTGATTGCCGGACGGG 59.935 52.381 5.05 3.74 39.58 5.28
275 276 0.542333 TAATTGATTGCCGGACGGGA 59.458 50.000 5.05 6.91 38.47 5.14
280 281 2.281208 TTGCCGGACGGGAACTTG 60.281 61.111 13.73 0.00 40.69 3.16
281 282 3.835790 TTGCCGGACGGGAACTTGG 62.836 63.158 13.73 0.00 40.69 3.61
282 283 4.324991 GCCGGACGGGAACTTGGT 62.325 66.667 5.05 0.00 38.47 3.67
283 284 2.358247 CCGGACGGGAACTTGGTG 60.358 66.667 0.00 0.00 38.47 4.17
284 285 3.047877 CGGACGGGAACTTGGTGC 61.048 66.667 0.00 0.00 0.00 5.01
285 286 2.430367 GGACGGGAACTTGGTGCT 59.570 61.111 0.00 0.00 0.00 4.40
286 287 1.671379 GGACGGGAACTTGGTGCTC 60.671 63.158 0.00 0.00 0.00 4.26
287 288 1.371558 GACGGGAACTTGGTGCTCT 59.628 57.895 0.00 0.00 0.00 4.09
288 289 0.670854 GACGGGAACTTGGTGCTCTC 60.671 60.000 0.00 0.00 0.00 3.20
289 290 1.738099 CGGGAACTTGGTGCTCTCG 60.738 63.158 0.00 0.00 0.00 4.04
290 291 1.376037 GGGAACTTGGTGCTCTCGG 60.376 63.158 0.00 0.00 0.00 4.63
291 292 1.376037 GGAACTTGGTGCTCTCGGG 60.376 63.158 0.00 0.00 0.00 5.14
292 293 1.371558 GAACTTGGTGCTCTCGGGT 59.628 57.895 0.00 0.00 0.00 5.28
293 294 0.250338 GAACTTGGTGCTCTCGGGTT 60.250 55.000 0.00 0.00 0.00 4.11
338 339 9.812347 ATAAATTCCATGTATCTTCCTGCATTA 57.188 29.630 0.00 0.00 0.00 1.90
367 368 1.662629 CTTTCTCTTGATGTCGCGCAT 59.337 47.619 8.75 14.39 41.24 4.73
380 381 3.220773 GTCGCGCATGACATGAATTATG 58.779 45.455 19.76 2.44 42.68 1.90
395 396 0.184933 TTATGGCCCCTCAAATCGGG 59.815 55.000 0.00 0.00 42.82 5.14
419 430 9.715123 GGGTGTTCTTCAAATTAAACATTTTTG 57.285 29.630 0.00 0.00 34.45 2.44
479 490 7.200455 ACAGTACAACAACTTAATCTTTTGGC 58.800 34.615 0.00 0.00 0.00 4.52
493 504 2.766345 TTTGGCTTGAAATCATGGCC 57.234 45.000 16.67 16.40 43.06 5.36
531 542 4.637483 AAAAGATTGTGCATCCCATACG 57.363 40.909 0.00 0.00 31.20 3.06
545 556 5.515797 TCCCATACGTCAACTCTATTGAG 57.484 43.478 2.37 2.37 45.43 3.02
638 654 1.182667 TGGGTGACGTAGAGACCATG 58.817 55.000 7.58 0.00 34.76 3.66
643 659 2.427453 GTGACGTAGAGACCATGTCCAT 59.573 50.000 0.00 0.00 32.18 3.41
684 700 5.299531 TCCTCTCCTCACTTATTGTGTATCG 59.700 44.000 0.00 0.00 46.27 2.92
685 701 5.067936 CCTCTCCTCACTTATTGTGTATCGT 59.932 44.000 0.00 0.00 46.27 3.73
723 739 9.394767 ACTTGTCATAATGCACATAGACATAAA 57.605 29.630 12.72 1.15 36.10 1.40
725 741 8.153479 TGTCATAATGCACATAGACATAAACC 57.847 34.615 9.11 0.00 31.72 3.27
726 742 7.042119 TGTCATAATGCACATAGACATAAACCG 60.042 37.037 9.11 0.00 31.72 4.44
735 751 7.517417 GCACATAGACATAAACCGAGAAATGAG 60.517 40.741 0.00 0.00 0.00 2.90
736 752 7.706607 CACATAGACATAAACCGAGAAATGAGA 59.293 37.037 0.00 0.00 0.00 3.27
744 764 3.866651 ACCGAGAAATGAGACAATGGAG 58.133 45.455 0.00 0.00 0.00 3.86
745 765 2.611292 CCGAGAAATGAGACAATGGAGC 59.389 50.000 0.00 0.00 0.00 4.70
746 766 3.264947 CGAGAAATGAGACAATGGAGCA 58.735 45.455 0.00 0.00 0.00 4.26
747 767 3.875727 CGAGAAATGAGACAATGGAGCAT 59.124 43.478 0.00 0.00 0.00 3.79
748 768 5.052481 CGAGAAATGAGACAATGGAGCATA 58.948 41.667 0.00 0.00 0.00 3.14
777 797 9.581099 AAAAAGTGTTGAATGATACGTTTCTTT 57.419 25.926 7.53 7.15 0.00 2.52
779 799 7.490962 AGTGTTGAATGATACGTTTCTTTCA 57.509 32.000 23.76 23.76 37.75 2.69
780 800 7.925993 AGTGTTGAATGATACGTTTCTTTCAA 58.074 30.769 29.15 29.15 42.60 2.69
784 804 7.722795 TGAATGATACGTTTCTTTCAACTGA 57.277 32.000 24.70 9.71 37.05 3.41
785 805 8.148807 TGAATGATACGTTTCTTTCAACTGAA 57.851 30.769 24.70 9.19 37.05 3.02
786 806 8.067784 TGAATGATACGTTTCTTTCAACTGAAC 58.932 33.333 24.70 6.74 37.05 3.18
787 807 5.969741 TGATACGTTTCTTTCAACTGAACG 58.030 37.500 7.53 5.51 33.13 3.95
788 808 3.047613 ACGTTTCTTTCAACTGAACGC 57.952 42.857 6.82 0.00 33.13 4.84
789 809 2.026990 CGTTTCTTTCAACTGAACGCG 58.973 47.619 3.53 3.53 33.13 6.01
790 810 2.536130 CGTTTCTTTCAACTGAACGCGT 60.536 45.455 5.58 5.58 33.13 6.01
791 811 3.301963 CGTTTCTTTCAACTGAACGCGTA 60.302 43.478 14.46 0.00 33.13 4.42
792 812 4.607557 CGTTTCTTTCAACTGAACGCGTAT 60.608 41.667 14.46 2.21 33.13 3.06
793 813 4.640805 TTCTTTCAACTGAACGCGTATC 57.359 40.909 14.46 13.20 33.13 2.24
794 814 2.659757 TCTTTCAACTGAACGCGTATCG 59.340 45.455 14.46 6.07 45.38 2.92
806 826 2.863673 CGCGTATCGTCGAAAATTCTG 58.136 47.619 0.00 0.00 0.00 3.02
807 827 2.528688 CGCGTATCGTCGAAAATTCTGA 59.471 45.455 0.00 0.00 0.00 3.27
808 828 3.001464 CGCGTATCGTCGAAAATTCTGAA 60.001 43.478 0.00 0.00 0.00 3.02
809 829 4.489682 CGCGTATCGTCGAAAATTCTGAAA 60.490 41.667 0.00 0.00 0.00 2.69
810 830 5.490213 GCGTATCGTCGAAAATTCTGAAAT 58.510 37.500 0.00 0.00 0.00 2.17
811 831 6.558976 CGCGTATCGTCGAAAATTCTGAAATA 60.559 38.462 0.00 0.00 0.00 1.40
812 832 7.114920 GCGTATCGTCGAAAATTCTGAAATAA 58.885 34.615 0.00 0.00 0.00 1.40
813 833 7.633281 GCGTATCGTCGAAAATTCTGAAATAAA 59.367 33.333 0.00 0.00 0.00 1.40
814 834 9.632969 CGTATCGTCGAAAATTCTGAAATAAAT 57.367 29.630 0.00 0.00 0.00 1.40
849 869 6.491394 TGCGAACAATAAGATTTAATTCCGG 58.509 36.000 0.00 0.00 0.00 5.14
854 874 5.068591 ACAATAAGATTTAATTCCGGTGGGC 59.931 40.000 0.00 0.00 0.00 5.36
855 875 2.067365 AGATTTAATTCCGGTGGGCC 57.933 50.000 0.00 0.00 0.00 5.80
856 876 1.286553 AGATTTAATTCCGGTGGGCCA 59.713 47.619 0.00 0.00 34.09 5.36
857 877 1.681264 GATTTAATTCCGGTGGGCCAG 59.319 52.381 6.40 0.00 34.09 4.85
858 878 0.699399 TTTAATTCCGGTGGGCCAGA 59.301 50.000 6.40 0.00 34.09 3.86
859 879 0.699399 TTAATTCCGGTGGGCCAGAA 59.301 50.000 6.40 7.98 35.80 3.02
860 880 0.923358 TAATTCCGGTGGGCCAGAAT 59.077 50.000 6.40 10.31 42.15 2.40
863 921 1.917336 TTCCGGTGGGCCAGAATACC 61.917 60.000 6.40 2.54 34.09 2.73
865 923 1.531748 CGGTGGGCCAGAATACCAT 59.468 57.895 6.40 0.00 36.54 3.55
867 925 1.402787 GGTGGGCCAGAATACCATTG 58.597 55.000 6.40 0.00 36.54 2.82
871 929 2.578480 TGGGCCAGAATACCATTGTGTA 59.422 45.455 0.00 0.00 0.00 2.90
874 932 3.371595 GGCCAGAATACCATTGTGTACCT 60.372 47.826 0.00 0.00 0.00 3.08
878 936 6.204882 GCCAGAATACCATTGTGTACCTAATC 59.795 42.308 0.00 0.00 0.00 1.75
881 939 9.342308 CAGAATACCATTGTGTACCTAATCATT 57.658 33.333 0.00 0.00 0.00 2.57
890 948 8.706492 TTGTGTACCTAATCATTTAAGTACGG 57.294 34.615 0.00 0.00 37.76 4.02
891 949 7.267128 TGTGTACCTAATCATTTAAGTACGGG 58.733 38.462 0.00 0.00 37.76 5.28
893 951 7.765819 GTGTACCTAATCATTTAAGTACGGGTT 59.234 37.037 0.00 0.00 37.76 4.11
894 952 7.765360 TGTACCTAATCATTTAAGTACGGGTTG 59.235 37.037 0.00 0.00 37.76 3.77
898 956 6.505044 AATCATTTAAGTACGGGTTGGTTC 57.495 37.500 0.00 0.00 0.00 3.62
899 957 3.995705 TCATTTAAGTACGGGTTGGTTCG 59.004 43.478 0.00 0.00 0.00 3.95
900 958 1.794512 TTAAGTACGGGTTGGTTCGC 58.205 50.000 0.00 0.00 0.00 4.70
924 1611 7.495055 GCCTGTTGATTTGATTTGATCCTTAT 58.505 34.615 0.00 0.00 0.00 1.73
925 1612 8.632679 GCCTGTTGATTTGATTTGATCCTTATA 58.367 33.333 0.00 0.00 0.00 0.98
1004 1691 1.104577 TTTCCTCGTGCCAACCCAAC 61.105 55.000 0.00 0.00 0.00 3.77
1007 1694 3.783362 CTCGTGCCAACCCAACCCA 62.783 63.158 0.00 0.00 0.00 4.51
1008 1695 2.835431 CGTGCCAACCCAACCCAA 60.835 61.111 0.00 0.00 0.00 4.12
1009 1696 2.427245 CGTGCCAACCCAACCCAAA 61.427 57.895 0.00 0.00 0.00 3.28
1010 1697 1.145156 GTGCCAACCCAACCCAAAC 59.855 57.895 0.00 0.00 0.00 2.93
1176 1867 1.761784 CTCCTTCCTCATCCAGGTGAG 59.238 57.143 0.65 0.65 43.95 3.51
1181 1872 3.702147 CTCATCCAGGTGAGGCATC 57.298 57.895 0.00 0.00 41.49 3.91
1209 1904 3.312890 TCAGATTCTCCTCCAATCCCTC 58.687 50.000 0.00 0.00 31.52 4.30
1461 2161 0.250124 TGCACCAGGTAGACAAACGG 60.250 55.000 0.00 0.00 0.00 4.44
1462 2162 1.574702 GCACCAGGTAGACAAACGGC 61.575 60.000 0.00 0.00 0.00 5.68
1506 2206 2.271800 GTGTACTATGGTGCTGTGAGC 58.728 52.381 0.00 0.00 42.82 4.26
1567 2267 2.883574 TCATTCGCCTTACCGTAACAG 58.116 47.619 0.00 0.00 0.00 3.16
1603 2303 7.384477 ACTTCAAACCCTTAGTAGTCATGTAC 58.616 38.462 0.00 0.00 0.00 2.90
1605 2305 7.166691 TCAAACCCTTAGTAGTCATGTACTC 57.833 40.000 0.00 0.00 39.80 2.59
1606 2306 6.154021 TCAAACCCTTAGTAGTCATGTACTCC 59.846 42.308 0.00 0.00 39.80 3.85
1607 2307 4.544683 ACCCTTAGTAGTCATGTACTCCC 58.455 47.826 0.00 0.00 39.80 4.30
1608 2308 4.232354 ACCCTTAGTAGTCATGTACTCCCT 59.768 45.833 0.00 2.43 39.80 4.20
1609 2309 4.828387 CCCTTAGTAGTCATGTACTCCCTC 59.172 50.000 0.00 0.00 39.80 4.30
1610 2310 4.828387 CCTTAGTAGTCATGTACTCCCTCC 59.172 50.000 0.00 0.00 39.80 4.30
1611 2311 2.933573 AGTAGTCATGTACTCCCTCCG 58.066 52.381 0.00 0.00 39.80 4.63
1612 2312 2.241685 AGTAGTCATGTACTCCCTCCGT 59.758 50.000 0.00 0.00 39.80 4.69
1613 2313 2.233305 AGTCATGTACTCCCTCCGTT 57.767 50.000 0.00 0.00 30.33 4.44
1614 2314 2.100989 AGTCATGTACTCCCTCCGTTC 58.899 52.381 0.00 0.00 30.33 3.95
1615 2315 1.136500 GTCATGTACTCCCTCCGTTCC 59.864 57.143 0.00 0.00 0.00 3.62
1616 2316 1.006758 TCATGTACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
1617 2317 2.242965 TCATGTACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
1618 2318 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
1619 2319 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
1620 2320 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
1621 2321 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
1622 2322 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
1623 2323 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
1624 2324 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
1625 2325 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1626 2326 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1627 2327 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1628 2328 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1629 2329 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1630 2330 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1631 2331 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1632 2332 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1648 2348 7.208225 AGTCTTTTTAGAGATTCCAACAAGC 57.792 36.000 0.00 0.00 0.00 4.01
1649 2349 6.073003 AGTCTTTTTAGAGATTCCAACAAGCG 60.073 38.462 0.00 0.00 0.00 4.68
1650 2350 5.995282 TCTTTTTAGAGATTCCAACAAGCGA 59.005 36.000 0.00 0.00 0.00 4.93
1651 2351 5.607119 TTTTAGAGATTCCAACAAGCGAC 57.393 39.130 0.00 0.00 0.00 5.19
1652 2352 4.537135 TTAGAGATTCCAACAAGCGACT 57.463 40.909 0.00 0.00 0.00 4.18
1653 2353 5.654603 TTAGAGATTCCAACAAGCGACTA 57.345 39.130 0.00 0.00 0.00 2.59
1654 2354 3.851098 AGAGATTCCAACAAGCGACTAC 58.149 45.455 0.00 0.00 0.00 2.73
1655 2355 3.258372 AGAGATTCCAACAAGCGACTACA 59.742 43.478 0.00 0.00 0.00 2.74
1656 2356 4.081420 AGAGATTCCAACAAGCGACTACAT 60.081 41.667 0.00 0.00 0.00 2.29
1657 2357 5.127194 AGAGATTCCAACAAGCGACTACATA 59.873 40.000 0.00 0.00 0.00 2.29
1658 2358 5.109903 AGATTCCAACAAGCGACTACATAC 58.890 41.667 0.00 0.00 0.00 2.39
1659 2359 2.871133 TCCAACAAGCGACTACATACG 58.129 47.619 0.00 0.00 0.00 3.06
1660 2360 1.924524 CCAACAAGCGACTACATACGG 59.075 52.381 0.00 0.00 0.00 4.02
1661 2361 2.416296 CCAACAAGCGACTACATACGGA 60.416 50.000 0.00 0.00 0.00 4.69
1662 2362 2.846039 ACAAGCGACTACATACGGAG 57.154 50.000 0.00 0.00 0.00 4.63
1663 2363 1.202268 ACAAGCGACTACATACGGAGC 60.202 52.381 0.00 0.00 0.00 4.70
1664 2364 1.100510 AAGCGACTACATACGGAGCA 58.899 50.000 0.00 0.00 0.00 4.26
1665 2365 1.100510 AGCGACTACATACGGAGCAA 58.899 50.000 0.00 0.00 0.00 3.91
1666 2366 1.475280 AGCGACTACATACGGAGCAAA 59.525 47.619 0.00 0.00 0.00 3.68
1667 2367 1.852895 GCGACTACATACGGAGCAAAG 59.147 52.381 0.00 0.00 0.00 2.77
1668 2368 2.734492 GCGACTACATACGGAGCAAAGT 60.734 50.000 0.00 0.00 0.00 2.66
1669 2369 2.852413 CGACTACATACGGAGCAAAGTG 59.148 50.000 0.00 0.00 0.00 3.16
1670 2370 3.427098 CGACTACATACGGAGCAAAGTGA 60.427 47.826 0.00 0.00 0.00 3.41
1671 2371 4.106197 GACTACATACGGAGCAAAGTGAG 58.894 47.826 0.00 0.00 0.00 3.51
1672 2372 3.510360 ACTACATACGGAGCAAAGTGAGT 59.490 43.478 0.00 0.00 0.00 3.41
1673 2373 2.688507 ACATACGGAGCAAAGTGAGTG 58.311 47.619 0.00 0.00 0.00 3.51
1674 2374 2.299013 ACATACGGAGCAAAGTGAGTGA 59.701 45.455 0.00 0.00 0.00 3.41
1675 2375 3.244078 ACATACGGAGCAAAGTGAGTGAA 60.244 43.478 0.00 0.00 0.00 3.18
1676 2376 2.550830 ACGGAGCAAAGTGAGTGAAT 57.449 45.000 0.00 0.00 0.00 2.57
1677 2377 2.417719 ACGGAGCAAAGTGAGTGAATC 58.582 47.619 0.00 0.00 0.00 2.52
1678 2378 2.037772 ACGGAGCAAAGTGAGTGAATCT 59.962 45.455 0.00 0.00 0.00 2.40
1679 2379 3.258372 ACGGAGCAAAGTGAGTGAATCTA 59.742 43.478 0.00 0.00 0.00 1.98
1680 2380 3.614616 CGGAGCAAAGTGAGTGAATCTAC 59.385 47.826 0.00 0.00 0.00 2.59
1681 2381 4.569943 GGAGCAAAGTGAGTGAATCTACA 58.430 43.478 0.00 0.00 0.00 2.74
1682 2382 4.390297 GGAGCAAAGTGAGTGAATCTACAC 59.610 45.833 0.00 0.00 40.60 2.90
1717 2417 9.692749 ATGTCTAAATACATCCGTATGTTGTAG 57.307 33.333 0.00 0.00 44.07 2.74
1718 2418 8.689061 TGTCTAAATACATCCGTATGTTGTAGT 58.311 33.333 0.00 0.00 44.07 2.73
1719 2419 9.178427 GTCTAAATACATCCGTATGTTGTAGTC 57.822 37.037 0.00 0.00 44.07 2.59
1720 2420 8.355169 TCTAAATACATCCGTATGTTGTAGTCC 58.645 37.037 0.00 0.00 44.07 3.85
1721 2421 6.474140 AATACATCCGTATGTTGTAGTCCA 57.526 37.500 0.00 0.00 44.07 4.02
1722 2422 6.665992 ATACATCCGTATGTTGTAGTCCAT 57.334 37.500 0.00 0.00 44.07 3.41
1723 2423 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
1724 2424 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
1725 2425 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
1726 2426 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
1727 2427 5.984725 TCCGTATGTTGTAGTCCATTTGAT 58.015 37.500 0.00 0.00 0.00 2.57
1728 2428 7.114866 TCCGTATGTTGTAGTCCATTTGATA 57.885 36.000 0.00 0.00 0.00 2.15
1729 2429 7.732025 TCCGTATGTTGTAGTCCATTTGATAT 58.268 34.615 0.00 0.00 0.00 1.63
1730 2430 7.655732 TCCGTATGTTGTAGTCCATTTGATATG 59.344 37.037 0.00 0.00 0.00 1.78
1731 2431 7.441157 CCGTATGTTGTAGTCCATTTGATATGT 59.559 37.037 0.00 0.00 0.00 2.29
1732 2432 8.487970 CGTATGTTGTAGTCCATTTGATATGTC 58.512 37.037 0.00 0.00 0.00 3.06
1733 2433 9.547753 GTATGTTGTAGTCCATTTGATATGTCT 57.452 33.333 0.00 0.00 0.00 3.41
1736 2436 9.952030 TGTTGTAGTCCATTTGATATGTCTAAA 57.048 29.630 0.00 0.00 0.00 1.85
1742 2442 9.965902 AGTCCATTTGATATGTCTAAAAAGACT 57.034 29.630 7.04 9.12 39.41 3.24
1760 2460 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1761 2461 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1762 2462 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1763 2463 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1764 2464 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
1765 2465 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
1775 2475 1.543802 CGGAGGGAGTAGATGATGCTC 59.456 57.143 0.00 0.00 39.75 4.26
1784 2484 6.481644 GGGAGTAGATGATGCTCTAACTTTTG 59.518 42.308 0.00 0.00 40.29 2.44
1874 2582 6.349777 CCTGCAAACGTTAATCAATTCCCTTA 60.350 38.462 0.00 0.00 0.00 2.69
1882 2590 7.827729 ACGTTAATCAATTCCCTTACTAGCTTT 59.172 33.333 0.00 0.00 0.00 3.51
1892 2600 3.412386 CTTACTAGCTTTGGTGGTTGCT 58.588 45.455 0.00 0.00 39.30 3.91
1893 2601 2.364972 ACTAGCTTTGGTGGTTGCTT 57.635 45.000 0.00 0.00 37.02 3.91
1960 2693 4.422840 TGTTGTCACAAATGCAGAACAAG 58.577 39.130 0.00 0.00 0.00 3.16
1965 2698 5.124617 TGTCACAAATGCAGAACAAGTTGTA 59.875 36.000 9.37 0.00 38.08 2.41
1985 2718 7.497909 AGTTGTACAGATTCGAGGAAAGAAAAA 59.502 33.333 0.00 0.00 0.00 1.94
2094 2827 3.879892 GCCCAGAGGTAAAACATGAGATC 59.120 47.826 0.00 0.00 34.57 2.75
2113 2846 7.642669 TGAGATCATTTGTCTTTGTTGTTCTC 58.357 34.615 0.00 0.00 35.33 2.87
2114 2847 7.500227 TGAGATCATTTGTCTTTGTTGTTCTCT 59.500 33.333 0.00 0.00 35.59 3.10
2115 2848 7.869800 AGATCATTTGTCTTTGTTGTTCTCTC 58.130 34.615 0.00 0.00 0.00 3.20
2116 2849 7.500227 AGATCATTTGTCTTTGTTGTTCTCTCA 59.500 33.333 0.00 0.00 0.00 3.27
2157 2890 2.450609 TAACTTCGGAGTCCAACTGC 57.549 50.000 10.49 0.00 34.21 4.40
2239 2972 2.118313 TCACAATCACATGCTCCCAG 57.882 50.000 0.00 0.00 0.00 4.45
2266 2999 1.655114 AACCCTTGGGAACTGCTGGT 61.655 55.000 13.39 0.00 0.00 4.00
2359 3092 6.186957 TGTCATAAGTGAATACCCATTTGCT 58.813 36.000 0.00 0.00 35.80 3.91
2371 3104 3.018856 CCCATTTGCTGAGCTCATACAA 58.981 45.455 18.63 20.71 0.00 2.41
2421 3154 7.068226 GGCAACAATTATGGTCACTAAGGTAAT 59.932 37.037 0.00 0.00 0.00 1.89
2450 3183 9.706691 CTTTCTTTTACCACTCTCTTGTGTATA 57.293 33.333 0.00 0.00 36.30 1.47
2459 3192 8.812972 ACCACTCTCTTGTGTATAATTAACTCA 58.187 33.333 0.00 0.00 36.30 3.41
2523 3259 5.866335 TCGAAATATGGTGTTGTGGTTAC 57.134 39.130 0.00 0.00 0.00 2.50
2638 3374 2.225791 CTGTCCTGGACCGCATCGAA 62.226 60.000 23.42 1.82 0.00 3.71
2641 3377 0.461870 TCCTGGACCGCATCGAATTG 60.462 55.000 0.00 0.00 0.00 2.32
2683 3419 1.726853 AGGTCTTTCCTCGAATTGCG 58.273 50.000 0.00 0.00 44.42 4.85
2692 3428 1.009078 CTCGAATTGCGGCTGATCAA 58.991 50.000 0.00 0.00 41.33 2.57
2737 3473 3.962718 CAGGCTTTTGGATGGATATTGGT 59.037 43.478 0.00 0.00 0.00 3.67
2920 3656 2.264480 CCTGGATGCGTCGTGGAA 59.736 61.111 9.45 0.00 0.00 3.53
2962 3698 1.373622 CACGGTGATGCGTGGTGTA 60.374 57.895 0.74 0.00 33.05 2.90
3001 3737 4.665212 CGTGCATCTCAAACAGCATTATT 58.335 39.130 0.00 0.00 39.43 1.40
3013 3749 2.390696 AGCATTATTGGCTGGCATTCA 58.609 42.857 4.22 0.00 40.80 2.57
3043 3779 1.331756 CAATGGGCACGCATAGAGAAC 59.668 52.381 0.17 0.00 0.00 3.01
3167 3903 2.098614 AGATCGTCATGTGAGCTCACT 58.901 47.619 38.81 25.24 46.55 3.41
3170 3906 0.668401 CGTCATGTGAGCTCACTGCA 60.668 55.000 38.81 24.65 46.55 4.41
3254 3990 5.470098 AGCTTAATATATGTGGAACTTGCGG 59.530 40.000 0.00 0.00 38.04 5.69
3314 4050 4.399004 TTTCCAGTGTTGTTTCCCATTG 57.601 40.909 0.00 0.00 0.00 2.82
3355 4091 0.179084 ATAGCGTTGTGGGGATGTCG 60.179 55.000 0.00 0.00 0.00 4.35
3368 4104 2.007608 GGATGTCGGCCTGTTTACTTC 58.992 52.381 0.00 0.00 0.00 3.01
3470 4206 3.808726 GCTGAGTATGAAGCTCCTGATTG 59.191 47.826 0.00 0.00 36.47 2.67
3476 4212 7.129457 AGTATGAAGCTCCTGATTGTGATAA 57.871 36.000 0.00 0.00 0.00 1.75
3481 4217 6.429078 TGAAGCTCCTGATTGTGATAATATGC 59.571 38.462 0.00 0.00 0.00 3.14
3485 4225 7.986320 AGCTCCTGATTGTGATAATATGCTATC 59.014 37.037 0.00 0.00 0.00 2.08
3486 4226 7.986320 GCTCCTGATTGTGATAATATGCTATCT 59.014 37.037 0.00 0.00 30.80 1.98
3508 4248 1.164662 CGCTATCAGCCTTGCAGCAT 61.165 55.000 0.00 0.00 38.18 3.79
3528 4270 5.709164 AGCATAAGGATATGAACAGCATTCC 59.291 40.000 0.19 0.00 41.25 3.01
3561 4304 5.452078 TCTGAAAATTTTGTGTAGGCTGG 57.548 39.130 8.47 0.00 0.00 4.85
3562 4305 4.280677 TCTGAAAATTTTGTGTAGGCTGGG 59.719 41.667 8.47 0.00 0.00 4.45
3563 4306 3.244044 TGAAAATTTTGTGTAGGCTGGGC 60.244 43.478 8.47 0.00 0.00 5.36
3656 4421 4.106197 GAGTATCGACCACTAGTTTGCTG 58.894 47.826 0.00 0.00 0.00 4.41
3674 4439 0.770499 TGATCCTGTTGTGCTGGGAA 59.230 50.000 0.00 0.00 36.89 3.97
3675 4440 1.271543 TGATCCTGTTGTGCTGGGAAG 60.272 52.381 0.00 0.00 36.89 3.46
3709 4474 4.818534 TGTGACTTCAGCTGTCAATTTC 57.181 40.909 14.67 3.87 44.63 2.17
3739 4504 1.377202 CGACTGGATGGGTTGTGGG 60.377 63.158 0.00 0.00 0.00 4.61
3775 4541 2.490509 TGCAGGCATCTCAATCAACAAG 59.509 45.455 0.00 0.00 0.00 3.16
3784 4550 4.944048 TCTCAATCAACAAGTCGAAGTGA 58.056 39.130 3.72 0.00 0.00 3.41
3874 4640 4.523173 CCTCTGTGTACCTCTTGTAACTCA 59.477 45.833 0.00 0.00 0.00 3.41
3875 4641 5.336055 CCTCTGTGTACCTCTTGTAACTCAG 60.336 48.000 0.00 0.00 0.00 3.35
3877 4643 3.639561 TGTGTACCTCTTGTAACTCAGCA 59.360 43.478 0.00 0.00 0.00 4.41
3910 4676 2.884639 CGGGACTGGTCAGATTGTTTTT 59.115 45.455 4.84 0.00 0.00 1.94
3912 4678 3.255888 GGGACTGGTCAGATTGTTTTTCC 59.744 47.826 4.84 0.00 0.00 3.13
3913 4679 3.888930 GGACTGGTCAGATTGTTTTTCCA 59.111 43.478 4.84 0.00 0.00 3.53
3914 4680 4.524328 GGACTGGTCAGATTGTTTTTCCAT 59.476 41.667 4.84 0.00 0.00 3.41
3915 4681 5.710099 GGACTGGTCAGATTGTTTTTCCATA 59.290 40.000 4.84 0.00 0.00 2.74
3946 4719 0.558712 AAGGGTTAGGTTTGGCCACA 59.441 50.000 3.88 0.00 40.61 4.17
3948 4721 0.677288 GGGTTAGGTTTGGCCACAAC 59.323 55.000 3.88 13.42 40.61 3.32
3952 4725 1.975660 TAGGTTTGGCCACAACAGTC 58.024 50.000 23.39 12.20 40.61 3.51
3961 4734 1.949525 GCCACAACAGTCTGAATGTGT 59.050 47.619 26.71 9.11 37.18 3.72
3964 4737 4.036262 GCCACAACAGTCTGAATGTGTAAA 59.964 41.667 26.71 0.00 37.18 2.01
3967 4740 4.881273 ACAACAGTCTGAATGTGTAAAGCA 59.119 37.500 11.85 0.00 0.00 3.91
3979 4752 5.356882 TGTGTAAAGCAGCTGTGTAAATC 57.643 39.130 16.64 2.84 0.00 2.17
4011 4784 9.305925 CTGTTACTTTCTTTCTTTTCTGCAAAT 57.694 29.630 0.00 0.00 0.00 2.32
4012 4785 9.301153 TGTTACTTTCTTTCTTTTCTGCAAATC 57.699 29.630 0.00 0.00 0.00 2.17
4086 4860 6.183360 GCAACTGGTGAGAACTGGAATTATAC 60.183 42.308 0.00 0.00 0.00 1.47
4124 4904 4.021102 AGTCATTGTCCACGGATTCTTT 57.979 40.909 0.00 0.00 0.00 2.52
4131 4911 7.710907 TCATTGTCCACGGATTCTTTAGATAAG 59.289 37.037 0.00 0.00 0.00 1.73
4132 4912 5.357257 TGTCCACGGATTCTTTAGATAAGC 58.643 41.667 0.00 0.00 0.00 3.09
4150 4931 3.001395 AGCGCTGTTCGATATCAGTAC 57.999 47.619 10.39 1.19 41.67 2.73
4159 4940 5.865013 TGTTCGATATCAGTACGCTTTTCAA 59.135 36.000 3.12 0.00 0.00 2.69
4219 5001 5.838531 AGGTAGATAGTTTTGTCTCTCGG 57.161 43.478 0.00 0.00 0.00 4.63
4233 5028 4.022589 TGTCTCTCGGAATCGTTGTTAAGT 60.023 41.667 0.00 0.00 37.69 2.24
4237 5032 3.979948 TCGGAATCGTTGTTAAGTCACA 58.020 40.909 0.00 0.00 37.69 3.58
4257 5052 9.696917 AGTCACAATTTCTGTTTGGATTAAATC 57.303 29.630 0.00 0.00 35.47 2.17
4272 5071 6.597672 TGGATTAAATCACGTAGCAGAACATT 59.402 34.615 0.00 0.00 0.00 2.71
4286 5085 5.235186 AGCAGAACATTCGTATATGCAACTC 59.765 40.000 0.00 0.00 32.96 3.01
4295 5094 9.750882 CATTCGTATATGCAACTCTTTATGATG 57.249 33.333 0.00 0.00 0.00 3.07
4296 5095 8.887036 TTCGTATATGCAACTCTTTATGATGT 57.113 30.769 0.00 0.00 0.00 3.06
4297 5096 8.887036 TCGTATATGCAACTCTTTATGATGTT 57.113 30.769 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.616156 AATGCCATGCTATGAATTTATGAAAAA 57.384 25.926 0.00 0.00 0.00 1.94
8 9 9.616156 AAATGCCATGCTATGAATTTATGAAAA 57.384 25.926 0.00 0.00 30.04 2.29
9 10 9.616156 AAAATGCCATGCTATGAATTTATGAAA 57.384 25.926 0.00 0.00 30.95 2.69
10 11 9.616156 AAAAATGCCATGCTATGAATTTATGAA 57.384 25.926 0.00 0.00 30.95 2.57
107 108 8.495949 CGATCCGCTTAGTTGTTTTTCATATAT 58.504 33.333 0.00 0.00 0.00 0.86
108 109 7.707464 TCGATCCGCTTAGTTGTTTTTCATATA 59.293 33.333 0.00 0.00 0.00 0.86
109 110 6.537301 TCGATCCGCTTAGTTGTTTTTCATAT 59.463 34.615 0.00 0.00 0.00 1.78
110 111 5.870433 TCGATCCGCTTAGTTGTTTTTCATA 59.130 36.000 0.00 0.00 0.00 2.15
111 112 4.693566 TCGATCCGCTTAGTTGTTTTTCAT 59.306 37.500 0.00 0.00 0.00 2.57
112 113 4.059511 TCGATCCGCTTAGTTGTTTTTCA 58.940 39.130 0.00 0.00 0.00 2.69
113 114 4.392216 GTCGATCCGCTTAGTTGTTTTTC 58.608 43.478 0.00 0.00 0.00 2.29
114 115 3.120786 CGTCGATCCGCTTAGTTGTTTTT 60.121 43.478 0.00 0.00 0.00 1.94
115 116 2.410730 CGTCGATCCGCTTAGTTGTTTT 59.589 45.455 0.00 0.00 0.00 2.43
116 117 1.990563 CGTCGATCCGCTTAGTTGTTT 59.009 47.619 0.00 0.00 0.00 2.83
117 118 1.625616 CGTCGATCCGCTTAGTTGTT 58.374 50.000 0.00 0.00 0.00 2.83
118 119 0.179145 CCGTCGATCCGCTTAGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
119 120 0.870307 CCCGTCGATCCGCTTAGTTG 60.870 60.000 0.00 0.00 0.00 3.16
120 121 1.436336 CCCGTCGATCCGCTTAGTT 59.564 57.895 0.00 0.00 0.00 2.24
121 122 2.487532 CCCCGTCGATCCGCTTAGT 61.488 63.158 0.00 0.00 0.00 2.24
122 123 1.524863 ATCCCCGTCGATCCGCTTAG 61.525 60.000 0.00 0.00 0.00 2.18
123 124 1.521450 GATCCCCGTCGATCCGCTTA 61.521 60.000 0.00 0.00 33.83 3.09
124 125 2.838225 ATCCCCGTCGATCCGCTT 60.838 61.111 0.00 0.00 0.00 4.68
125 126 3.296054 GATCCCCGTCGATCCGCT 61.296 66.667 0.00 0.00 33.83 5.52
126 127 4.702081 CGATCCCCGTCGATCCGC 62.702 72.222 0.00 0.00 44.06 5.54
127 128 4.702081 GCGATCCCCGTCGATCCG 62.702 72.222 0.00 0.00 44.06 4.18
128 129 4.359455 GGCGATCCCCGTCGATCC 62.359 72.222 0.00 0.00 44.06 3.36
144 145 4.517934 CTGGATGGCAGGCTGGGG 62.518 72.222 17.64 0.00 0.00 4.96
146 147 4.435970 TGCTGGATGGCAGGCTGG 62.436 66.667 17.64 0.00 37.29 4.85
155 156 0.321564 TTTCCACCGTCTGCTGGATG 60.322 55.000 0.00 0.00 36.42 3.51
156 157 0.400213 TTTTCCACCGTCTGCTGGAT 59.600 50.000 0.00 0.00 36.42 3.41
157 158 0.181587 TTTTTCCACCGTCTGCTGGA 59.818 50.000 0.00 0.00 34.58 3.86
158 159 1.068333 CATTTTTCCACCGTCTGCTGG 60.068 52.381 0.00 0.00 0.00 4.85
159 160 1.068333 CCATTTTTCCACCGTCTGCTG 60.068 52.381 0.00 0.00 0.00 4.41
160 161 1.247567 CCATTTTTCCACCGTCTGCT 58.752 50.000 0.00 0.00 0.00 4.24
161 162 0.958822 ACCATTTTTCCACCGTCTGC 59.041 50.000 0.00 0.00 0.00 4.26
162 163 1.196808 CGACCATTTTTCCACCGTCTG 59.803 52.381 0.00 0.00 0.00 3.51
163 164 1.519408 CGACCATTTTTCCACCGTCT 58.481 50.000 0.00 0.00 0.00 4.18
164 165 0.109919 GCGACCATTTTTCCACCGTC 60.110 55.000 0.00 0.00 0.00 4.79
165 166 0.536460 AGCGACCATTTTTCCACCGT 60.536 50.000 0.00 0.00 0.00 4.83
166 167 0.109781 CAGCGACCATTTTTCCACCG 60.110 55.000 0.00 0.00 0.00 4.94
167 168 0.958822 ACAGCGACCATTTTTCCACC 59.041 50.000 0.00 0.00 0.00 4.61
168 169 1.930371 GCACAGCGACCATTTTTCCAC 60.930 52.381 0.00 0.00 0.00 4.02
169 170 0.313672 GCACAGCGACCATTTTTCCA 59.686 50.000 0.00 0.00 0.00 3.53
170 171 0.313672 TGCACAGCGACCATTTTTCC 59.686 50.000 0.00 0.00 0.00 3.13
171 172 1.666888 CCTGCACAGCGACCATTTTTC 60.667 52.381 0.00 0.00 0.00 2.29
172 173 0.314935 CCTGCACAGCGACCATTTTT 59.685 50.000 0.00 0.00 0.00 1.94
173 174 1.526575 CCCTGCACAGCGACCATTTT 61.527 55.000 0.00 0.00 0.00 1.82
174 175 1.973281 CCCTGCACAGCGACCATTT 60.973 57.895 0.00 0.00 0.00 2.32
175 176 2.360350 CCCTGCACAGCGACCATT 60.360 61.111 0.00 0.00 0.00 3.16
176 177 4.415150 CCCCTGCACAGCGACCAT 62.415 66.667 0.00 0.00 0.00 3.55
196 197 2.190578 CGGTTGCTGGGGAGGATC 59.809 66.667 0.00 0.00 0.00 3.36
197 198 3.411517 CCGGTTGCTGGGGAGGAT 61.412 66.667 0.00 0.00 0.00 3.24
198 199 4.649705 TCCGGTTGCTGGGGAGGA 62.650 66.667 0.00 0.00 0.00 3.71
199 200 4.101448 CTCCGGTTGCTGGGGAGG 62.101 72.222 0.00 0.00 42.91 4.30
200 201 4.101448 CCTCCGGTTGCTGGGGAG 62.101 72.222 0.00 0.00 45.56 4.30
201 202 4.649705 TCCTCCGGTTGCTGGGGA 62.650 66.667 0.00 0.00 30.29 4.81
202 203 4.101448 CTCCTCCGGTTGCTGGGG 62.101 72.222 0.00 0.00 0.00 4.96
203 204 3.322466 ACTCCTCCGGTTGCTGGG 61.322 66.667 0.00 0.00 0.00 4.45
204 205 2.046892 CACTCCTCCGGTTGCTGG 60.047 66.667 0.00 0.00 0.00 4.85
205 206 0.036010 ATTCACTCCTCCGGTTGCTG 60.036 55.000 0.00 0.00 0.00 4.41
206 207 0.250513 GATTCACTCCTCCGGTTGCT 59.749 55.000 0.00 0.00 0.00 3.91
207 208 0.744771 GGATTCACTCCTCCGGTTGC 60.745 60.000 0.00 0.00 41.29 4.17
208 209 0.613260 TGGATTCACTCCTCCGGTTG 59.387 55.000 0.00 0.00 45.21 3.77
209 210 0.905357 CTGGATTCACTCCTCCGGTT 59.095 55.000 0.00 0.00 45.21 4.44
210 211 0.252284 ACTGGATTCACTCCTCCGGT 60.252 55.000 0.00 0.00 44.58 5.28
211 212 0.176680 CACTGGATTCACTCCTCCGG 59.823 60.000 0.00 0.00 45.21 5.14
212 213 1.135915 CTCACTGGATTCACTCCTCCG 59.864 57.143 0.00 0.00 45.21 4.63
213 214 2.167487 GTCTCACTGGATTCACTCCTCC 59.833 54.545 0.00 0.00 45.21 4.30
214 215 2.828520 TGTCTCACTGGATTCACTCCTC 59.171 50.000 0.00 0.00 45.21 3.71
215 216 2.894731 TGTCTCACTGGATTCACTCCT 58.105 47.619 0.00 0.00 45.21 3.69
216 217 3.685139 TTGTCTCACTGGATTCACTCC 57.315 47.619 0.00 0.00 45.19 3.85
217 218 3.748568 GGTTTGTCTCACTGGATTCACTC 59.251 47.826 0.00 0.00 0.00 3.51
218 219 3.496870 GGGTTTGTCTCACTGGATTCACT 60.497 47.826 0.00 0.00 0.00 3.41
219 220 2.814336 GGGTTTGTCTCACTGGATTCAC 59.186 50.000 0.00 0.00 0.00 3.18
220 221 2.441375 TGGGTTTGTCTCACTGGATTCA 59.559 45.455 0.00 0.00 0.00 2.57
221 222 3.140325 TGGGTTTGTCTCACTGGATTC 57.860 47.619 0.00 0.00 0.00 2.52
222 223 3.222603 GTTGGGTTTGTCTCACTGGATT 58.777 45.455 0.00 0.00 0.00 3.01
223 224 2.174639 TGTTGGGTTTGTCTCACTGGAT 59.825 45.455 0.00 0.00 0.00 3.41
224 225 1.562008 TGTTGGGTTTGTCTCACTGGA 59.438 47.619 0.00 0.00 0.00 3.86
225 226 2.051334 TGTTGGGTTTGTCTCACTGG 57.949 50.000 0.00 0.00 0.00 4.00
226 227 3.016736 AGTTGTTGGGTTTGTCTCACTG 58.983 45.455 0.00 0.00 0.00 3.66
227 228 3.279434 GAGTTGTTGGGTTTGTCTCACT 58.721 45.455 0.00 0.00 0.00 3.41
228 229 3.013921 TGAGTTGTTGGGTTTGTCTCAC 58.986 45.455 0.00 0.00 0.00 3.51
229 230 3.358111 TGAGTTGTTGGGTTTGTCTCA 57.642 42.857 0.00 0.00 0.00 3.27
230 231 3.694566 AGTTGAGTTGTTGGGTTTGTCTC 59.305 43.478 0.00 0.00 0.00 3.36
231 232 3.697166 AGTTGAGTTGTTGGGTTTGTCT 58.303 40.909 0.00 0.00 0.00 3.41
232 233 4.638865 ACTAGTTGAGTTGTTGGGTTTGTC 59.361 41.667 0.00 0.00 33.13 3.18
233 234 4.595986 ACTAGTTGAGTTGTTGGGTTTGT 58.404 39.130 0.00 0.00 33.13 2.83
245 246 5.354234 CCGGCAATCAATTAACTAGTTGAGT 59.646 40.000 18.56 6.44 41.56 3.41
246 247 5.584649 TCCGGCAATCAATTAACTAGTTGAG 59.415 40.000 18.56 5.38 35.78 3.02
247 248 5.353123 GTCCGGCAATCAATTAACTAGTTGA 59.647 40.000 18.56 10.67 36.56 3.18
248 249 5.569413 GTCCGGCAATCAATTAACTAGTTG 58.431 41.667 18.56 1.93 0.00 3.16
249 250 4.331717 CGTCCGGCAATCAATTAACTAGTT 59.668 41.667 13.68 13.68 0.00 2.24
250 251 3.869246 CGTCCGGCAATCAATTAACTAGT 59.131 43.478 0.00 0.00 0.00 2.57
251 252 3.247648 CCGTCCGGCAATCAATTAACTAG 59.752 47.826 0.00 0.00 0.00 2.57
252 253 3.199677 CCGTCCGGCAATCAATTAACTA 58.800 45.455 0.00 0.00 0.00 2.24
253 254 2.014128 CCGTCCGGCAATCAATTAACT 58.986 47.619 0.00 0.00 0.00 2.24
254 255 1.064952 CCCGTCCGGCAATCAATTAAC 59.935 52.381 0.00 0.00 0.00 2.01
255 256 1.065345 TCCCGTCCGGCAATCAATTAA 60.065 47.619 0.00 0.00 0.00 1.40
256 257 0.542333 TCCCGTCCGGCAATCAATTA 59.458 50.000 0.00 0.00 0.00 1.40
257 258 0.322997 TTCCCGTCCGGCAATCAATT 60.323 50.000 0.00 0.00 0.00 2.32
258 259 1.029947 GTTCCCGTCCGGCAATCAAT 61.030 55.000 0.00 0.00 0.00 2.57
259 260 1.673009 GTTCCCGTCCGGCAATCAA 60.673 57.895 0.00 0.00 0.00 2.57
260 261 2.046700 GTTCCCGTCCGGCAATCA 60.047 61.111 0.00 0.00 0.00 2.57
261 262 1.376812 AAGTTCCCGTCCGGCAATC 60.377 57.895 0.00 0.00 0.00 2.67
262 263 1.674322 CAAGTTCCCGTCCGGCAAT 60.674 57.895 0.00 0.00 0.00 3.56
263 264 2.281208 CAAGTTCCCGTCCGGCAA 60.281 61.111 0.00 0.00 0.00 4.52
264 265 4.323477 CCAAGTTCCCGTCCGGCA 62.323 66.667 0.00 0.00 0.00 5.69
265 266 4.324991 ACCAAGTTCCCGTCCGGC 62.325 66.667 0.00 0.00 0.00 6.13
266 267 2.358247 CACCAAGTTCCCGTCCGG 60.358 66.667 0.00 0.00 0.00 5.14
267 268 3.047877 GCACCAAGTTCCCGTCCG 61.048 66.667 0.00 0.00 0.00 4.79
268 269 1.671379 GAGCACCAAGTTCCCGTCC 60.671 63.158 0.00 0.00 0.00 4.79
269 270 0.670854 GAGAGCACCAAGTTCCCGTC 60.671 60.000 0.00 0.00 0.00 4.79
270 271 1.371558 GAGAGCACCAAGTTCCCGT 59.628 57.895 0.00 0.00 0.00 5.28
271 272 1.738099 CGAGAGCACCAAGTTCCCG 60.738 63.158 0.00 0.00 0.00 5.14
272 273 1.376037 CCGAGAGCACCAAGTTCCC 60.376 63.158 0.00 0.00 0.00 3.97
273 274 1.376037 CCCGAGAGCACCAAGTTCC 60.376 63.158 0.00 0.00 0.00 3.62
274 275 0.250338 AACCCGAGAGCACCAAGTTC 60.250 55.000 0.00 0.00 0.00 3.01
275 276 0.250338 GAACCCGAGAGCACCAAGTT 60.250 55.000 0.00 0.00 0.00 2.66
276 277 1.371558 GAACCCGAGAGCACCAAGT 59.628 57.895 0.00 0.00 0.00 3.16
277 278 1.376037 GGAACCCGAGAGCACCAAG 60.376 63.158 0.00 0.00 0.00 3.61
278 279 2.747686 GGAACCCGAGAGCACCAA 59.252 61.111 0.00 0.00 0.00 3.67
319 320 6.250344 CATGTAATGCAGGAAGATACATGG 57.750 41.667 18.16 7.98 44.96 3.66
338 339 5.178252 CGACATCAAGAGAAAGTGAACATGT 59.822 40.000 0.00 0.00 0.00 3.21
367 368 2.513317 TGAGGGGCCATAATTCATGTCA 59.487 45.455 4.39 0.00 32.21 3.58
457 468 7.918562 TCAAGCCAAAAGATTAAGTTGTTGTAC 59.081 33.333 0.00 0.00 0.00 2.90
479 490 7.228314 AGATGAATATGGCCATGATTTCAAG 57.772 36.000 29.01 0.00 0.00 3.02
545 556 3.559238 AATCGGTGCAATCTTCAACAC 57.441 42.857 0.00 0.00 0.00 3.32
697 713 8.962884 TTATGTCTATGTGCATTATGACAAGT 57.037 30.769 15.65 6.83 37.85 3.16
708 724 4.729227 TCTCGGTTTATGTCTATGTGCA 57.271 40.909 0.00 0.00 0.00 4.57
723 739 3.866651 CTCCATTGTCTCATTTCTCGGT 58.133 45.455 0.00 0.00 0.00 4.69
725 741 3.264947 TGCTCCATTGTCTCATTTCTCG 58.735 45.455 0.00 0.00 0.00 4.04
726 742 6.932356 TTATGCTCCATTGTCTCATTTCTC 57.068 37.500 0.00 0.00 0.00 2.87
753 773 8.402472 TGAAAGAAACGTATCATTCAACACTTT 58.598 29.630 0.00 0.00 34.98 2.66
755 775 7.490962 TGAAAGAAACGTATCATTCAACACT 57.509 32.000 0.00 0.00 34.98 3.55
762 782 7.069569 CGTTCAGTTGAAAGAAACGTATCATT 58.930 34.615 2.21 0.00 35.94 2.57
770 790 3.047613 ACGCGTTCAGTTGAAAGAAAC 57.952 42.857 5.58 0.00 35.94 2.78
771 791 4.375606 CGATACGCGTTCAGTTGAAAGAAA 60.376 41.667 20.78 0.00 35.94 2.52
772 792 3.120616 CGATACGCGTTCAGTTGAAAGAA 59.879 43.478 20.78 0.00 35.94 2.52
773 793 2.659757 CGATACGCGTTCAGTTGAAAGA 59.340 45.455 20.78 0.00 35.94 2.52
774 794 3.008456 CGATACGCGTTCAGTTGAAAG 57.992 47.619 20.78 3.83 35.58 2.62
787 807 4.494597 TTCAGAATTTTCGACGATACGC 57.505 40.909 0.00 0.00 0.00 4.42
788 808 9.632969 ATTTATTTCAGAATTTTCGACGATACG 57.367 29.630 0.00 0.00 0.00 3.06
823 843 7.647715 CCGGAATTAAATCTTATTGTTCGCATT 59.352 33.333 0.00 0.00 0.00 3.56
826 846 6.413818 CACCGGAATTAAATCTTATTGTTCGC 59.586 38.462 9.46 0.00 0.00 4.70
827 847 6.910433 CCACCGGAATTAAATCTTATTGTTCG 59.090 38.462 9.46 0.00 0.00 3.95
829 849 6.406512 GCCCACCGGAATTAAATCTTATTGTT 60.407 38.462 9.46 0.00 0.00 2.83
830 850 5.068591 GCCCACCGGAATTAAATCTTATTGT 59.931 40.000 9.46 0.00 0.00 2.71
832 852 4.587262 GGCCCACCGGAATTAAATCTTATT 59.413 41.667 9.46 0.00 0.00 1.40
834 854 3.053544 TGGCCCACCGGAATTAAATCTTA 60.054 43.478 9.46 0.00 39.70 2.10
837 857 1.681264 CTGGCCCACCGGAATTAAATC 59.319 52.381 9.46 0.00 46.41 2.17
846 866 1.994885 ATGGTATTCTGGCCCACCGG 61.995 60.000 0.00 0.00 44.63 5.28
847 867 0.106719 AATGGTATTCTGGCCCACCG 60.107 55.000 0.00 0.00 39.70 4.94
849 869 1.750778 CACAATGGTATTCTGGCCCAC 59.249 52.381 0.00 0.00 0.00 4.61
854 874 7.279615 TGATTAGGTACACAATGGTATTCTGG 58.720 38.462 0.00 0.00 0.00 3.86
855 875 8.908786 ATGATTAGGTACACAATGGTATTCTG 57.091 34.615 0.00 0.00 0.00 3.02
856 876 9.920946 AAATGATTAGGTACACAATGGTATTCT 57.079 29.630 0.00 0.00 0.00 2.40
865 923 7.765360 CCCGTACTTAAATGATTAGGTACACAA 59.235 37.037 16.26 0.00 46.74 3.33
867 925 7.267857 ACCCGTACTTAAATGATTAGGTACAC 58.732 38.462 16.26 0.26 46.74 2.90
871 929 6.117488 CCAACCCGTACTTAAATGATTAGGT 58.883 40.000 0.00 0.00 35.68 3.08
874 932 6.313411 CGAACCAACCCGTACTTAAATGATTA 59.687 38.462 0.00 0.00 0.00 1.75
878 936 3.425227 GCGAACCAACCCGTACTTAAATG 60.425 47.826 0.00 0.00 0.00 2.32
881 939 1.607767 GGCGAACCAACCCGTACTTAA 60.608 52.381 0.00 0.00 35.26 1.85
885 943 2.030958 CAGGCGAACCAACCCGTAC 61.031 63.158 0.00 0.00 39.06 3.67
887 945 3.409605 AACAGGCGAACCAACCCGT 62.410 57.895 0.00 0.00 39.06 5.28
888 946 2.593436 AACAGGCGAACCAACCCG 60.593 61.111 0.00 0.00 39.06 5.28
890 948 0.958822 AATCAACAGGCGAACCAACC 59.041 50.000 0.00 0.00 39.06 3.77
891 949 2.034053 TCAAATCAACAGGCGAACCAAC 59.966 45.455 0.00 0.00 39.06 3.77
893 951 1.974265 TCAAATCAACAGGCGAACCA 58.026 45.000 0.00 0.00 39.06 3.67
894 952 3.575965 AATCAAATCAACAGGCGAACC 57.424 42.857 0.00 0.00 0.00 3.62
898 956 4.107622 GGATCAAATCAAATCAACAGGCG 58.892 43.478 0.00 0.00 0.00 5.52
899 957 5.334724 AGGATCAAATCAAATCAACAGGC 57.665 39.130 0.00 0.00 0.00 4.85
924 1611 3.004419 CGCAATAGACCACGAGGAGATTA 59.996 47.826 5.68 0.00 38.69 1.75
925 1612 2.223829 CGCAATAGACCACGAGGAGATT 60.224 50.000 5.68 0.00 38.69 2.40
926 1613 1.338337 CGCAATAGACCACGAGGAGAT 59.662 52.381 5.68 0.00 38.69 2.75
928 1615 0.738975 TCGCAATAGACCACGAGGAG 59.261 55.000 5.68 0.00 38.69 3.69
929 1616 0.454600 GTCGCAATAGACCACGAGGA 59.545 55.000 5.68 0.00 38.69 3.71
930 1617 0.866061 CGTCGCAATAGACCACGAGG 60.866 60.000 0.00 0.00 37.85 4.63
1048 1736 4.018960 GGGATGAGAATATGCCAGTGGTAT 60.019 45.833 17.48 17.48 38.33 2.73
1209 1904 3.400054 GAACCGACTGGGAGGGGG 61.400 72.222 0.00 0.00 40.75 5.40
1258 1953 8.225603 ACAGAATTAAAATCACACTCACAGTT 57.774 30.769 0.00 0.00 0.00 3.16
1506 2206 0.530650 ACTCGCACACAACTCACTGG 60.531 55.000 0.00 0.00 0.00 4.00
1567 2267 5.644977 AGGGTTTGAAGTTTAGCTATTGC 57.355 39.130 0.00 0.00 40.05 3.56
1603 2303 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1605 2305 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1606 2306 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1622 2322 8.784043 GCTTGTTGGAATCTCTAAAAAGACTTA 58.216 33.333 6.81 0.00 35.06 2.24
1623 2323 7.520614 CGCTTGTTGGAATCTCTAAAAAGACTT 60.521 37.037 6.81 0.00 35.06 3.01
1624 2324 6.073003 CGCTTGTTGGAATCTCTAAAAAGACT 60.073 38.462 6.81 0.00 35.06 3.24
1625 2325 6.073222 TCGCTTGTTGGAATCTCTAAAAAGAC 60.073 38.462 6.81 0.00 35.06 3.01
1626 2326 5.995282 TCGCTTGTTGGAATCTCTAAAAAGA 59.005 36.000 6.81 0.00 35.06 2.52
1627 2327 6.073003 AGTCGCTTGTTGGAATCTCTAAAAAG 60.073 38.462 0.00 0.00 35.87 2.27
1628 2328 5.763204 AGTCGCTTGTTGGAATCTCTAAAAA 59.237 36.000 0.00 0.00 0.00 1.94
1629 2329 5.305585 AGTCGCTTGTTGGAATCTCTAAAA 58.694 37.500 0.00 0.00 0.00 1.52
1630 2330 4.894784 AGTCGCTTGTTGGAATCTCTAAA 58.105 39.130 0.00 0.00 0.00 1.85
1631 2331 4.537135 AGTCGCTTGTTGGAATCTCTAA 57.463 40.909 0.00 0.00 0.00 2.10
1632 2332 4.461431 TGTAGTCGCTTGTTGGAATCTCTA 59.539 41.667 0.00 0.00 0.00 2.43
1633 2333 3.258372 TGTAGTCGCTTGTTGGAATCTCT 59.742 43.478 0.00 0.00 0.00 3.10
1634 2334 3.585862 TGTAGTCGCTTGTTGGAATCTC 58.414 45.455 0.00 0.00 0.00 2.75
1635 2335 3.678056 TGTAGTCGCTTGTTGGAATCT 57.322 42.857 0.00 0.00 0.00 2.40
1636 2336 4.026804 CGTATGTAGTCGCTTGTTGGAATC 60.027 45.833 0.00 0.00 0.00 2.52
1637 2337 3.863424 CGTATGTAGTCGCTTGTTGGAAT 59.137 43.478 0.00 0.00 0.00 3.01
1638 2338 3.247442 CGTATGTAGTCGCTTGTTGGAA 58.753 45.455 0.00 0.00 0.00 3.53
1639 2339 2.416296 CCGTATGTAGTCGCTTGTTGGA 60.416 50.000 0.00 0.00 0.00 3.53
1640 2340 1.924524 CCGTATGTAGTCGCTTGTTGG 59.075 52.381 0.00 0.00 0.00 3.77
1641 2341 2.852413 CTCCGTATGTAGTCGCTTGTTG 59.148 50.000 0.00 0.00 0.00 3.33
1642 2342 2.734492 GCTCCGTATGTAGTCGCTTGTT 60.734 50.000 0.00 0.00 0.00 2.83
1643 2343 1.202268 GCTCCGTATGTAGTCGCTTGT 60.202 52.381 0.00 0.00 0.00 3.16
1644 2344 1.202256 TGCTCCGTATGTAGTCGCTTG 60.202 52.381 0.00 0.00 0.00 4.01
1645 2345 1.100510 TGCTCCGTATGTAGTCGCTT 58.899 50.000 0.00 0.00 0.00 4.68
1646 2346 1.100510 TTGCTCCGTATGTAGTCGCT 58.899 50.000 0.00 0.00 0.00 4.93
1647 2347 1.852895 CTTTGCTCCGTATGTAGTCGC 59.147 52.381 0.00 0.00 0.00 5.19
1648 2348 2.852413 CACTTTGCTCCGTATGTAGTCG 59.148 50.000 0.00 0.00 0.00 4.18
1649 2349 4.106029 TCACTTTGCTCCGTATGTAGTC 57.894 45.455 0.00 0.00 0.00 2.59
1650 2350 3.510360 ACTCACTTTGCTCCGTATGTAGT 59.490 43.478 0.00 0.00 0.00 2.73
1651 2351 3.859961 CACTCACTTTGCTCCGTATGTAG 59.140 47.826 0.00 0.00 0.00 2.74
1652 2352 3.508402 TCACTCACTTTGCTCCGTATGTA 59.492 43.478 0.00 0.00 0.00 2.29
1653 2353 2.299013 TCACTCACTTTGCTCCGTATGT 59.701 45.455 0.00 0.00 0.00 2.29
1654 2354 2.959516 TCACTCACTTTGCTCCGTATG 58.040 47.619 0.00 0.00 0.00 2.39
1655 2355 3.678056 TTCACTCACTTTGCTCCGTAT 57.322 42.857 0.00 0.00 0.00 3.06
1656 2356 3.258372 AGATTCACTCACTTTGCTCCGTA 59.742 43.478 0.00 0.00 0.00 4.02
1657 2357 2.037772 AGATTCACTCACTTTGCTCCGT 59.962 45.455 0.00 0.00 0.00 4.69
1658 2358 2.693069 AGATTCACTCACTTTGCTCCG 58.307 47.619 0.00 0.00 0.00 4.63
1659 2359 4.390297 GTGTAGATTCACTCACTTTGCTCC 59.610 45.833 0.00 0.00 35.68 4.70
1660 2360 5.233988 AGTGTAGATTCACTCACTTTGCTC 58.766 41.667 0.00 0.00 44.07 4.26
1661 2361 5.220710 AGTGTAGATTCACTCACTTTGCT 57.779 39.130 0.00 0.00 44.07 3.91
1691 2391 9.692749 CTACAACATACGGATGTATTTAGACAT 57.307 33.333 15.10 0.00 45.93 3.06
1692 2392 8.689061 ACTACAACATACGGATGTATTTAGACA 58.311 33.333 15.10 0.00 45.93 3.41
1693 2393 9.178427 GACTACAACATACGGATGTATTTAGAC 57.822 37.037 15.10 10.93 45.93 2.59
1694 2394 8.355169 GGACTACAACATACGGATGTATTTAGA 58.645 37.037 15.10 0.00 45.93 2.10
1695 2395 8.139350 TGGACTACAACATACGGATGTATTTAG 58.861 37.037 15.10 15.91 45.93 1.85
1696 2396 8.009622 TGGACTACAACATACGGATGTATTTA 57.990 34.615 15.10 4.80 45.93 1.40
1697 2397 6.880484 TGGACTACAACATACGGATGTATTT 58.120 36.000 15.10 3.78 45.93 1.40
1698 2398 6.474140 TGGACTACAACATACGGATGTATT 57.526 37.500 15.10 6.48 45.93 1.89
1699 2399 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
1700 2400 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
1702 2402 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
1703 2403 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
1704 2404 5.408880 TCAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
1705 2405 7.441157 ACATATCAAATGGACTACAACATACGG 59.559 37.037 0.00 0.00 0.00 4.02
1706 2406 8.365399 ACATATCAAATGGACTACAACATACG 57.635 34.615 0.00 0.00 0.00 3.06
1707 2407 9.547753 AGACATATCAAATGGACTACAACATAC 57.452 33.333 0.00 0.00 0.00 2.39
1710 2410 9.952030 TTTAGACATATCAAATGGACTACAACA 57.048 29.630 0.00 0.00 0.00 3.33
1716 2416 9.965902 AGTCTTTTTAGACATATCAAATGGACT 57.034 29.630 7.92 0.00 41.02 3.85
1734 2434 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1735 2435 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1736 2436 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1737 2437 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1738 2438 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1739 2439 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1740 2440 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1741 2441 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1742 2442 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
1743 2443 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
1744 2444 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
1745 2445 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
1746 2446 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
1747 2447 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
1748 2448 3.203710 TCATCTACTCCCTCCGTTCCTAA 59.796 47.826 0.00 0.00 0.00 2.69
1749 2449 2.781757 TCATCTACTCCCTCCGTTCCTA 59.218 50.000 0.00 0.00 0.00 2.94
1750 2450 1.569548 TCATCTACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36
1751 2451 2.068834 TCATCTACTCCCTCCGTTCC 57.931 55.000 0.00 0.00 0.00 3.62
1752 2452 2.288518 GCATCATCTACTCCCTCCGTTC 60.289 54.545 0.00 0.00 0.00 3.95
1753 2453 1.689273 GCATCATCTACTCCCTCCGTT 59.311 52.381 0.00 0.00 0.00 4.44
1754 2454 1.133325 AGCATCATCTACTCCCTCCGT 60.133 52.381 0.00 0.00 0.00 4.69
1755 2455 1.543802 GAGCATCATCTACTCCCTCCG 59.456 57.143 0.00 0.00 33.17 4.63
1756 2456 2.888212 AGAGCATCATCTACTCCCTCC 58.112 52.381 0.00 0.00 37.82 4.30
1757 2457 5.076873 AGTTAGAGCATCATCTACTCCCTC 58.923 45.833 0.00 0.00 37.82 4.30
1758 2458 5.073437 AGTTAGAGCATCATCTACTCCCT 57.927 43.478 0.00 0.00 37.82 4.20
1759 2459 5.799827 AAGTTAGAGCATCATCTACTCCC 57.200 43.478 0.00 0.00 37.82 4.30
1760 2460 7.044798 ACAAAAGTTAGAGCATCATCTACTCC 58.955 38.462 0.00 0.00 37.82 3.85
1761 2461 9.587772 TTACAAAAGTTAGAGCATCATCTACTC 57.412 33.333 0.00 0.00 37.82 2.59
1762 2462 9.372369 GTTACAAAAGTTAGAGCATCATCTACT 57.628 33.333 0.00 0.00 37.82 2.57
1763 2463 8.604890 GGTTACAAAAGTTAGAGCATCATCTAC 58.395 37.037 0.00 0.00 37.82 2.59
1764 2464 8.318412 TGGTTACAAAAGTTAGAGCATCATCTA 58.682 33.333 0.00 0.00 37.82 1.98
1765 2465 7.168219 TGGTTACAAAAGTTAGAGCATCATCT 58.832 34.615 0.00 0.00 37.82 2.90
1775 2475 7.795859 CAATGGCAATTGGTTACAAAAGTTAG 58.204 34.615 5.85 0.00 40.55 2.34
1874 2582 1.956477 CAAGCAACCACCAAAGCTAGT 59.044 47.619 0.00 0.00 36.07 2.57
1882 2590 0.325671 TTTTCCCCAAGCAACCACCA 60.326 50.000 0.00 0.00 0.00 4.17
1892 2600 2.907042 ACACACAAAGGTTTTTCCCCAA 59.093 40.909 0.00 0.00 36.75 4.12
1893 2601 2.498078 GACACACAAAGGTTTTTCCCCA 59.502 45.455 0.00 0.00 36.75 4.96
1960 2693 6.780706 TTTCTTTCCTCGAATCTGTACAAC 57.219 37.500 0.00 0.00 0.00 3.32
2094 2827 7.646314 AGATGAGAGAACAACAAAGACAAATG 58.354 34.615 0.00 0.00 0.00 2.32
2157 2890 4.756642 TGACCTGAAATAGACAAAGCACAG 59.243 41.667 0.00 0.00 0.00 3.66
2239 2972 1.064825 TTCCCAAGGGTTCAGTCTCC 58.935 55.000 4.80 0.00 36.47 3.71
2359 3092 5.122869 GCTCTTGTGAAATTGTATGAGCTCA 59.877 40.000 20.79 20.79 41.42 4.26
2371 3104 0.813184 CGCCATGGCTCTTGTGAAAT 59.187 50.000 33.07 0.00 39.32 2.17
2421 3154 6.542370 CACAAGAGAGTGGTAAAAGAAAGGAA 59.458 38.462 0.00 0.00 35.88 3.36
2450 3183 7.227512 GGCAGTCAGCTTACATATGAGTTAATT 59.772 37.037 10.38 0.00 44.79 1.40
2451 3184 6.708054 GGCAGTCAGCTTACATATGAGTTAAT 59.292 38.462 10.38 0.00 44.79 1.40
2452 3185 6.049149 GGCAGTCAGCTTACATATGAGTTAA 58.951 40.000 10.38 0.00 44.79 2.01
2453 3186 5.363868 AGGCAGTCAGCTTACATATGAGTTA 59.636 40.000 10.38 0.00 44.79 2.24
2454 3187 4.163078 AGGCAGTCAGCTTACATATGAGTT 59.837 41.667 10.38 0.00 44.79 3.01
2455 3188 3.708631 AGGCAGTCAGCTTACATATGAGT 59.291 43.478 10.38 0.00 44.79 3.41
2456 3189 4.039004 AGAGGCAGTCAGCTTACATATGAG 59.961 45.833 10.38 0.00 44.79 2.90
2457 3190 3.963374 AGAGGCAGTCAGCTTACATATGA 59.037 43.478 10.38 0.00 44.79 2.15
2458 3191 4.333913 AGAGGCAGTCAGCTTACATATG 57.666 45.455 0.00 0.00 44.79 1.78
2459 3192 6.485830 TTAAGAGGCAGTCAGCTTACATAT 57.514 37.500 0.03 0.00 44.79 1.78
2523 3259 0.393077 AACTCCAGTTGTGTCCTCCG 59.607 55.000 0.00 0.00 36.80 4.63
2617 3353 1.826024 GATGCGGTCCAGGACAGAT 59.174 57.895 22.82 12.84 33.68 2.90
2683 3419 1.202076 GCGTACAGCTTTTGATCAGCC 60.202 52.381 0.00 0.00 44.04 4.85
2698 3434 1.600107 TGGAAGGACCATGGCGTAC 59.400 57.895 13.04 0.00 44.64 3.67
2737 3473 1.555075 GTGATGTAGTCCCTTGGCTGA 59.445 52.381 0.00 0.00 0.00 4.26
2920 3656 0.980231 GGGAGAGCCTCACACCATCT 60.980 60.000 0.00 0.00 33.47 2.90
3001 3737 1.971167 GACCGTTGAATGCCAGCCA 60.971 57.895 0.00 0.00 0.00 4.75
3013 3749 2.359478 GCCCATTGTCCGACCGTT 60.359 61.111 0.00 0.00 0.00 4.44
3043 3779 3.005261 CGTCTTCTCCCAGGATAGTCATG 59.995 52.174 0.00 0.00 0.00 3.07
3170 3906 5.009610 ACATCGTTCCTAAAAGCATTTGTGT 59.990 36.000 0.00 0.00 39.02 3.72
3254 3990 7.440523 ACATTCTCATCAGTTTAACAAGTCC 57.559 36.000 0.00 0.00 0.00 3.85
3314 4050 4.479786 ACTAAAGCTGGAAGTGGATCTC 57.520 45.455 0.00 0.00 35.30 2.75
3355 4091 5.241728 ACAGAGAAAATGAAGTAAACAGGCC 59.758 40.000 0.00 0.00 0.00 5.19
3481 4217 3.768406 CAAGGCTGATAGCGCTAGATAG 58.232 50.000 23.37 19.36 43.62 2.08
3485 4225 0.249615 TGCAAGGCTGATAGCGCTAG 60.250 55.000 23.37 12.41 43.62 3.42
3486 4226 0.249615 CTGCAAGGCTGATAGCGCTA 60.250 55.000 21.30 21.30 43.62 4.26
3487 4227 1.523258 CTGCAAGGCTGATAGCGCT 60.523 57.895 17.26 17.26 43.62 5.92
3508 4248 5.545063 TCGGAATGCTGTTCATATCCTTA 57.455 39.130 5.09 0.00 34.33 2.69
3528 4270 5.005299 ACAAAATTTTCAGAAAGCGGTTTCG 59.995 36.000 28.53 23.31 45.90 3.46
3561 4304 0.526954 CGGCAGAATTGAGCAATGCC 60.527 55.000 13.63 13.63 35.34 4.40
3562 4305 1.143969 GCGGCAGAATTGAGCAATGC 61.144 55.000 0.00 0.00 32.23 3.56
3563 4306 0.454600 AGCGGCAGAATTGAGCAATG 59.545 50.000 1.45 0.00 33.68 2.82
3645 4410 4.067896 CACAACAGGATCAGCAAACTAGT 58.932 43.478 0.00 0.00 0.00 2.57
3656 4421 1.457346 CTTCCCAGCACAACAGGATC 58.543 55.000 0.00 0.00 0.00 3.36
3674 4439 3.874392 AGTCACAAAAGTGCAAAAGCT 57.126 38.095 0.00 0.00 0.00 3.74
3675 4440 3.925913 TGAAGTCACAAAAGTGCAAAAGC 59.074 39.130 0.00 0.00 0.00 3.51
3733 4498 2.226330 CAAGAACATTCGGACCCACAA 58.774 47.619 0.00 0.00 0.00 3.33
3739 4504 1.197721 CCTGCACAAGAACATTCGGAC 59.802 52.381 0.00 0.00 0.00 4.79
3808 4574 5.491982 AGCGGTTTACATCTTCTCATCTTT 58.508 37.500 0.00 0.00 0.00 2.52
3874 4640 0.904865 TCCCGTCCACAGAATCTGCT 60.905 55.000 10.62 0.00 34.37 4.24
3875 4641 0.741221 GTCCCGTCCACAGAATCTGC 60.741 60.000 10.62 0.00 34.37 4.26
3877 4643 0.898320 CAGTCCCGTCCACAGAATCT 59.102 55.000 0.00 0.00 0.00 2.40
3910 4676 4.160329 ACCCTTTCAGCGATCTATATGGA 58.840 43.478 0.00 0.00 0.00 3.41
3912 4678 6.102663 CCTAACCCTTTCAGCGATCTATATG 58.897 44.000 0.00 0.00 0.00 1.78
3913 4679 5.780793 ACCTAACCCTTTCAGCGATCTATAT 59.219 40.000 0.00 0.00 0.00 0.86
3914 4680 5.145564 ACCTAACCCTTTCAGCGATCTATA 58.854 41.667 0.00 0.00 0.00 1.31
3915 4681 3.967987 ACCTAACCCTTTCAGCGATCTAT 59.032 43.478 0.00 0.00 0.00 1.98
3937 4710 2.136298 TTCAGACTGTTGTGGCCAAA 57.864 45.000 7.24 0.00 30.94 3.28
3946 4719 4.023707 GCTGCTTTACACATTCAGACTGTT 60.024 41.667 1.59 0.00 0.00 3.16
3948 4721 3.750130 AGCTGCTTTACACATTCAGACTG 59.250 43.478 0.00 0.00 0.00 3.51
3952 4725 3.251729 ACACAGCTGCTTTACACATTCAG 59.748 43.478 15.27 0.00 0.00 3.02
3961 4734 5.642063 GGTACAGATTTACACAGCTGCTTTA 59.358 40.000 15.27 0.00 31.74 1.85
3964 4737 3.261897 AGGTACAGATTTACACAGCTGCT 59.738 43.478 15.27 0.00 31.74 4.24
3967 4740 4.891992 ACAGGTACAGATTTACACAGCT 57.108 40.909 0.00 0.00 0.00 4.24
3979 4752 9.110502 AGAAAAGAAAGAAAGTAACAGGTACAG 57.889 33.333 0.00 0.00 34.88 2.74
4011 4784 1.069973 CGCAAGATGCAACTTTGTCGA 60.070 47.619 6.47 0.00 45.36 4.20
4012 4785 1.321016 CGCAAGATGCAACTTTGTCG 58.679 50.000 6.47 7.33 45.36 4.35
4086 4860 1.264288 GACTTGCAACTCCGAAAGTGG 59.736 52.381 0.00 0.00 38.58 4.00
4124 4904 5.181433 ACTGATATCGAACAGCGCTTATCTA 59.819 40.000 19.79 9.98 40.61 1.98
4131 4911 1.709203 CGTACTGATATCGAACAGCGC 59.291 52.381 0.00 0.00 40.61 5.92
4132 4912 1.709203 GCGTACTGATATCGAACAGCG 59.291 52.381 14.46 12.33 42.69 5.18
4150 4931 6.155827 TCTGGGTAATTCAATTTGAAAAGCG 58.844 36.000 15.34 5.99 40.12 4.68
4159 4940 6.267471 TGCAAAAGTCTCTGGGTAATTCAATT 59.733 34.615 0.00 0.00 0.00 2.32
4219 5001 7.855904 ACAGAAATTGTGACTTAACAACGATTC 59.144 33.333 0.00 0.00 42.56 2.52
4233 5028 9.474920 GTGATTTAATCCAAACAGAAATTGTGA 57.525 29.630 2.22 0.00 40.74 3.58
4237 5032 9.840427 CTACGTGATTTAATCCAAACAGAAATT 57.160 29.630 0.00 0.00 0.00 1.82
4257 5052 5.387444 GCATATACGAATGTTCTGCTACGTG 60.387 44.000 0.00 0.00 35.66 4.49
4272 5071 8.887036 AACATCATAAAGAGTTGCATATACGA 57.113 30.769 0.00 0.00 0.00 3.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.