Multiple sequence alignment - TraesCS3A01G361400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G361400 chr3A 100.000 5405 0 0 2331 7735 609482185 609476781 0.000000e+00 9982.0
1 TraesCS3A01G361400 chr3A 100.000 2048 0 0 1 2048 609484515 609482468 0.000000e+00 3783.0
2 TraesCS3A01G361400 chr3A 87.140 451 44 9 3151 3592 609480767 609480322 4.170000e-137 499.0
3 TraesCS3A01G361400 chr3A 87.140 451 44 9 3749 4194 609481365 609480924 4.170000e-137 499.0
4 TraesCS3A01G361400 chr3A 86.486 185 22 2 2332 2516 352494935 352494754 4.730000e-47 200.0
5 TraesCS3A01G361400 chr3A 84.553 123 17 2 532 653 700597177 700597056 3.790000e-23 121.0
6 TraesCS3A01G361400 chr3D 95.662 3043 88 13 4316 7343 466287140 466284127 0.000000e+00 4848.0
7 TraesCS3A01G361400 chr3D 93.759 1442 57 10 605 2031 466291618 466290195 0.000000e+00 2134.0
8 TraesCS3A01G361400 chr3D 94.264 1168 52 11 3151 4306 466290201 466289037 0.000000e+00 1772.0
9 TraesCS3A01G361400 chr3D 88.031 635 68 7 2525 3155 271485194 271484564 0.000000e+00 745.0
10 TraesCS3A01G361400 chr3D 82.582 643 84 16 2535 3153 83937829 83938467 6.830000e-150 542.0
11 TraesCS3A01G361400 chr3D 82.265 671 73 22 2516 3157 164995859 164996512 8.830000e-149 538.0
12 TraesCS3A01G361400 chr3D 86.364 462 43 12 3743 4194 466290208 466289757 3.240000e-133 486.0
13 TraesCS3A01G361400 chr3D 91.011 356 32 0 352 707 466291988 466291633 1.510000e-131 481.0
14 TraesCS3A01G361400 chr3D 90.816 294 24 3 2 295 466297231 466296941 2.620000e-104 390.0
15 TraesCS3A01G361400 chr3D 89.247 186 18 2 2333 2516 271486761 271486576 1.680000e-56 231.0
16 TraesCS3A01G361400 chr3D 91.935 124 9 1 7592 7715 466283946 466283824 1.030000e-38 172.0
17 TraesCS3A01G361400 chr3D 84.118 170 22 4 2 169 395042543 395042709 8.030000e-35 159.0
18 TraesCS3A01G361400 chr3B 94.471 2080 71 19 4830 6897 620206777 620204730 0.000000e+00 3164.0
19 TraesCS3A01G361400 chr3B 96.070 1705 55 10 3151 4847 620208643 620206943 0.000000e+00 2767.0
20 TraesCS3A01G361400 chr3B 94.681 1034 29 5 714 1731 620210111 620209088 0.000000e+00 1581.0
21 TraesCS3A01G361400 chr3B 87.111 450 44 9 3151 3591 620208044 620207600 1.500000e-136 497.0
22 TraesCS3A01G361400 chr3B 95.318 299 14 0 1733 2031 620208935 620208637 7.020000e-130 475.0
23 TraesCS3A01G361400 chr3B 93.750 256 11 4 6944 7196 620204577 620204324 5.670000e-101 379.0
24 TraesCS3A01G361400 chr3B 91.935 124 9 1 7592 7715 620203221 620203099 1.030000e-38 172.0
25 TraesCS3A01G361400 chr3B 83.616 177 22 6 1 172 142684929 142684755 8.030000e-35 159.0
26 TraesCS3A01G361400 chr3B 81.818 110 20 0 472 581 666473189 666473298 8.260000e-15 93.5
27 TraesCS3A01G361400 chrUn 86.636 651 75 8 2510 3155 39800414 39801057 0.000000e+00 710.0
28 TraesCS3A01G361400 chrUn 86.636 651 75 8 2510 3155 300441190 300441833 0.000000e+00 710.0
29 TraesCS3A01G361400 chrUn 85.057 174 19 6 1 169 382102274 382102445 3.710000e-38 171.0
30 TraesCS3A01G361400 chr4B 85.354 635 84 8 2525 3155 412111863 412111234 0.000000e+00 649.0
31 TraesCS3A01G361400 chr4B 90.217 184 17 1 2333 2516 594430924 594430742 1.000000e-58 239.0
32 TraesCS3A01G361400 chr5D 84.914 643 85 11 2519 3160 461852235 461851604 2.350000e-179 640.0
33 TraesCS3A01G361400 chr7B 84.038 639 89 11 2522 3155 66818363 66817733 3.090000e-168 603.0
34 TraesCS3A01G361400 chr7B 87.535 353 37 2 2801 3153 524400410 524400065 1.210000e-107 401.0
35 TraesCS3A01G361400 chr7B 85.119 168 21 4 7 171 349324442 349324608 1.330000e-37 169.0
36 TraesCS3A01G361400 chr7B 82.075 106 19 0 475 580 188001334 188001439 2.970000e-14 91.6
37 TraesCS3A01G361400 chr5B 84.056 646 81 13 2510 3155 375946543 375947166 3.090000e-168 603.0
38 TraesCS3A01G361400 chr5B 87.912 182 17 4 2333 2511 261263250 261263429 7.870000e-50 209.0
39 TraesCS3A01G361400 chr5B 81.579 114 21 0 467 580 608359011 608359124 2.300000e-15 95.3
40 TraesCS3A01G361400 chr5A 80.861 674 84 24 2516 3157 650032476 650033136 9.020000e-134 488.0
41 TraesCS3A01G361400 chr5A 86.387 191 18 6 2332 2516 437030746 437030558 1.320000e-47 202.0
42 TraesCS3A01G361400 chr5A 86.667 60 6 2 1953 2011 168127703 168127645 1.800000e-06 65.8
43 TraesCS3A01G361400 chr2D 90.270 185 16 2 2333 2516 113534550 113534367 2.790000e-59 241.0
44 TraesCS3A01G361400 chr2D 86.667 75 8 2 1938 2011 175825032 175825105 1.790000e-11 82.4
45 TraesCS3A01G361400 chr6B 89.130 184 20 0 2333 2516 686873659 686873476 6.040000e-56 230.0
46 TraesCS3A01G361400 chr6B 87.500 56 3 3 1960 2011 146164996 146164941 2.330000e-05 62.1
47 TraesCS3A01G361400 chr1B 88.770 187 17 3 2332 2516 414775038 414774854 7.810000e-55 226.0
48 TraesCS3A01G361400 chr1B 85.549 173 19 5 3 171 125755283 125755453 7.980000e-40 176.0
49 TraesCS3A01G361400 chr1B 83.616 177 22 6 1 172 571286801 571286627 8.030000e-35 159.0
50 TraesCS3A01G361400 chr1B 81.982 111 18 2 471 581 115652127 115652235 8.260000e-15 93.5
51 TraesCS3A01G361400 chr7D 86.559 186 22 3 2334 2516 479134979 479135164 1.320000e-47 202.0
52 TraesCS3A01G361400 chr7D 83.060 183 30 1 488 669 125485940 125486122 1.730000e-36 165.0
53 TraesCS3A01G361400 chr7D 81.982 111 20 0 471 581 213516699 213516589 2.300000e-15 95.3
54 TraesCS3A01G361400 chr1D 78.594 313 54 10 5186 5493 379793852 379794156 2.200000e-45 195.0
55 TraesCS3A01G361400 chr2B 85.714 161 17 5 7 163 407830397 407830555 1.730000e-36 165.0
56 TraesCS3A01G361400 chr2B 82.234 197 28 4 476 669 699071373 699071181 6.210000e-36 163.0
57 TraesCS3A01G361400 chr2B 85.714 77 7 3 1938 2011 224586450 224586525 2.310000e-10 78.7
58 TraesCS3A01G361400 chr6A 84.524 168 22 4 6 170 45669567 45669401 6.210000e-36 163.0
59 TraesCS3A01G361400 chr2A 81.034 116 21 1 466 581 360764308 360764194 2.970000e-14 91.6
60 TraesCS3A01G361400 chr2A 80.159 126 19 5 459 581 602728616 602728494 1.070000e-13 89.8
61 TraesCS3A01G361400 chr4A 97.674 43 1 0 300 342 713266534 713266576 2.990000e-09 75.0
62 TraesCS3A01G361400 chr6D 92.157 51 3 1 1938 1987 15350393 15350343 3.870000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G361400 chr3A 609476781 609484515 7734 True 3690.750000 9982 93.570000 1 7735 4 chr3A.!!$R3 7734
1 TraesCS3A01G361400 chr3D 466283824 466291988 8164 True 1648.833333 4848 92.165833 352 7715 6 chr3D.!!$R3 7363
2 TraesCS3A01G361400 chr3D 83937829 83938467 638 False 542.000000 542 82.582000 2535 3153 1 chr3D.!!$F1 618
3 TraesCS3A01G361400 chr3D 164995859 164996512 653 False 538.000000 538 82.265000 2516 3157 1 chr3D.!!$F2 641
4 TraesCS3A01G361400 chr3D 271484564 271486761 2197 True 488.000000 745 88.639000 2333 3155 2 chr3D.!!$R2 822
5 TraesCS3A01G361400 chr3B 620203099 620210111 7012 True 1290.714286 3164 93.333714 714 7715 7 chr3B.!!$R2 7001
6 TraesCS3A01G361400 chrUn 39800414 39801057 643 False 710.000000 710 86.636000 2510 3155 1 chrUn.!!$F1 645
7 TraesCS3A01G361400 chrUn 300441190 300441833 643 False 710.000000 710 86.636000 2510 3155 1 chrUn.!!$F2 645
8 TraesCS3A01G361400 chr4B 412111234 412111863 629 True 649.000000 649 85.354000 2525 3155 1 chr4B.!!$R1 630
9 TraesCS3A01G361400 chr5D 461851604 461852235 631 True 640.000000 640 84.914000 2519 3160 1 chr5D.!!$R1 641
10 TraesCS3A01G361400 chr7B 66817733 66818363 630 True 603.000000 603 84.038000 2522 3155 1 chr7B.!!$R1 633
11 TraesCS3A01G361400 chr5B 375946543 375947166 623 False 603.000000 603 84.056000 2510 3155 1 chr5B.!!$F2 645
12 TraesCS3A01G361400 chr5A 650032476 650033136 660 False 488.000000 488 80.861000 2516 3157 1 chr5A.!!$F1 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
471 472 0.469892 CCTCAAATACATGGGGGCCC 60.470 60.0 15.76 15.76 37.30 5.80 F
473 474 0.555769 TCAAATACATGGGGGCCCTC 59.444 55.0 24.38 21.26 36.94 4.30 F
2405 2691 0.456142 GCCGATTTCCCGCTGTTTTC 60.456 55.0 0.00 0.00 0.00 2.29 F
2574 4234 0.340208 AGAGGGAGGAGAAATCCGGT 59.660 55.0 0.00 0.00 37.75 5.28 F
4042 5815 0.660488 TGCCAGTTGTTAGTTGTGCG 59.340 50.0 0.00 0.00 0.00 5.34 F
4193 5966 0.032952 TTCGTGTGACCTGTAGTGGC 59.967 55.0 0.00 0.00 0.00 5.01 F
5565 9418 0.179062 GCTCTGATGATTGGAGGCGT 60.179 55.0 0.00 0.00 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2405 2691 0.032117 GGAAATGGAGGGAAAGGGGG 60.032 60.000 0.00 0.00 0.00 5.40 R
2457 2744 1.699054 CGGATCTGGGGAGAATGGCA 61.699 60.000 0.00 0.00 0.00 4.92 R
3561 5330 0.176219 TCACACGAGACCCAAACGTT 59.824 50.000 0.00 0.00 38.18 3.99 R
4165 5938 2.160615 CAGGTCACACGAAACACAAACA 59.839 45.455 0.00 0.00 0.00 2.83 R
4961 8814 0.393537 GCACTCCATGGAAGACTGGG 60.394 60.000 17.00 5.81 33.13 4.45 R
6122 9976 0.613260 ATGGACAGGTAGAAAGCGCA 59.387 50.000 11.47 0.00 0.00 6.09 R
7501 12056 0.108992 CGCTACCTGTCCTTGCGTAA 60.109 55.000 0.00 0.00 41.45 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.613551 ACTCCCTCCGTTCATAAATATAAGT 57.386 36.000 0.00 0.00 0.00 2.24
32 33 7.668492 ACTCCCTCCGTTCATAAATATAAGTC 58.332 38.462 0.00 0.00 0.00 3.01
33 34 7.509659 ACTCCCTCCGTTCATAAATATAAGTCT 59.490 37.037 0.00 0.00 0.00 3.24
34 35 8.258850 TCCCTCCGTTCATAAATATAAGTCTT 57.741 34.615 0.00 0.00 0.00 3.01
35 36 8.711170 TCCCTCCGTTCATAAATATAAGTCTTT 58.289 33.333 0.00 0.00 0.00 2.52
36 37 9.338622 CCCTCCGTTCATAAATATAAGTCTTTT 57.661 33.333 0.00 0.00 0.00 2.27
111 112 8.207545 AGAATGTAGATCCACTCATTTTACTCC 58.792 37.037 0.00 0.00 31.65 3.85
112 113 5.902681 TGTAGATCCACTCATTTTACTCCG 58.097 41.667 0.00 0.00 0.00 4.63
113 114 5.655090 TGTAGATCCACTCATTTTACTCCGA 59.345 40.000 0.00 0.00 0.00 4.55
114 115 5.677319 AGATCCACTCATTTTACTCCGAA 57.323 39.130 0.00 0.00 0.00 4.30
115 116 6.240549 AGATCCACTCATTTTACTCCGAAT 57.759 37.500 0.00 0.00 0.00 3.34
116 117 6.051717 AGATCCACTCATTTTACTCCGAATG 58.948 40.000 0.00 0.00 35.18 2.67
117 118 5.160607 TCCACTCATTTTACTCCGAATGT 57.839 39.130 0.00 0.00 35.35 2.71
118 119 6.288941 TCCACTCATTTTACTCCGAATGTA 57.711 37.500 0.00 0.00 35.35 2.29
119 120 6.338146 TCCACTCATTTTACTCCGAATGTAG 58.662 40.000 0.00 0.00 35.35 2.74
120 121 6.070995 TCCACTCATTTTACTCCGAATGTAGT 60.071 38.462 0.00 0.00 35.35 2.73
121 122 6.255887 CCACTCATTTTACTCCGAATGTAGTC 59.744 42.308 0.00 0.00 35.35 2.59
122 123 6.255887 CACTCATTTTACTCCGAATGTAGTCC 59.744 42.308 0.00 0.00 35.35 3.85
123 124 5.667466 TCATTTTACTCCGAATGTAGTCCC 58.333 41.667 0.00 0.00 35.35 4.46
124 125 5.424252 TCATTTTACTCCGAATGTAGTCCCT 59.576 40.000 0.00 0.00 35.35 4.20
125 126 6.608405 TCATTTTACTCCGAATGTAGTCCCTA 59.392 38.462 0.00 0.00 35.35 3.53
126 127 7.289317 TCATTTTACTCCGAATGTAGTCCCTAT 59.711 37.037 0.00 0.00 35.35 2.57
127 128 7.427989 TTTTACTCCGAATGTAGTCCCTATT 57.572 36.000 0.00 0.00 0.00 1.73
128 129 4.939052 ACTCCGAATGTAGTCCCTATTG 57.061 45.455 0.00 0.00 0.00 1.90
129 130 4.543689 ACTCCGAATGTAGTCCCTATTGA 58.456 43.478 0.00 0.00 0.00 2.57
130 131 4.960469 ACTCCGAATGTAGTCCCTATTGAA 59.040 41.667 0.00 0.00 0.00 2.69
131 132 5.424252 ACTCCGAATGTAGTCCCTATTGAAA 59.576 40.000 0.00 0.00 0.00 2.69
132 133 6.099845 ACTCCGAATGTAGTCCCTATTGAAAT 59.900 38.462 0.00 0.00 0.00 2.17
133 134 7.289317 ACTCCGAATGTAGTCCCTATTGAAATA 59.711 37.037 0.00 0.00 0.00 1.40
134 135 8.202461 TCCGAATGTAGTCCCTATTGAAATAT 57.798 34.615 0.00 0.00 0.00 1.28
135 136 8.311836 TCCGAATGTAGTCCCTATTGAAATATC 58.688 37.037 0.00 0.00 0.00 1.63
136 137 8.314751 CCGAATGTAGTCCCTATTGAAATATCT 58.685 37.037 0.00 0.00 0.00 1.98
179 180 9.442047 AGAAACAGAGGAAGTACAATATGAAAG 57.558 33.333 0.00 0.00 0.00 2.62
180 181 9.436957 GAAACAGAGGAAGTACAATATGAAAGA 57.563 33.333 0.00 0.00 0.00 2.52
181 182 9.442047 AAACAGAGGAAGTACAATATGAAAGAG 57.558 33.333 0.00 0.00 0.00 2.85
182 183 8.367660 ACAGAGGAAGTACAATATGAAAGAGA 57.632 34.615 0.00 0.00 0.00 3.10
183 184 8.254508 ACAGAGGAAGTACAATATGAAAGAGAC 58.745 37.037 0.00 0.00 0.00 3.36
184 185 7.708752 CAGAGGAAGTACAATATGAAAGAGACC 59.291 40.741 0.00 0.00 0.00 3.85
185 186 7.621683 AGAGGAAGTACAATATGAAAGAGACCT 59.378 37.037 0.00 0.00 0.00 3.85
186 187 8.840200 AGGAAGTACAATATGAAAGAGACCTA 57.160 34.615 0.00 0.00 0.00 3.08
187 188 9.440761 AGGAAGTACAATATGAAAGAGACCTAT 57.559 33.333 0.00 0.00 0.00 2.57
188 189 9.699703 GGAAGTACAATATGAAAGAGACCTATC 57.300 37.037 0.00 0.00 0.00 2.08
191 192 9.647918 AGTACAATATGAAAGAGACCTATCTGA 57.352 33.333 0.00 0.00 34.34 3.27
194 195 9.152327 ACAATATGAAAGAGACCTATCTGATGA 57.848 33.333 0.00 0.00 34.34 2.92
197 198 7.615039 ATGAAAGAGACCTATCTGATGATGT 57.385 36.000 0.00 0.00 34.34 3.06
198 199 6.814043 TGAAAGAGACCTATCTGATGATGTG 58.186 40.000 0.00 0.00 34.34 3.21
199 200 6.382282 TGAAAGAGACCTATCTGATGATGTGT 59.618 38.462 0.00 0.00 34.34 3.72
200 201 7.561356 TGAAAGAGACCTATCTGATGATGTGTA 59.439 37.037 0.00 0.00 34.34 2.90
201 202 8.489676 AAAGAGACCTATCTGATGATGTGTAT 57.510 34.615 0.00 0.00 34.34 2.29
202 203 8.489676 AAGAGACCTATCTGATGATGTGTATT 57.510 34.615 0.00 0.00 34.34 1.89
203 204 8.489676 AGAGACCTATCTGATGATGTGTATTT 57.510 34.615 0.00 0.00 34.34 1.40
204 205 9.593565 AGAGACCTATCTGATGATGTGTATTTA 57.406 33.333 0.00 0.00 34.34 1.40
205 206 9.853555 GAGACCTATCTGATGATGTGTATTTAG 57.146 37.037 0.00 0.00 34.34 1.85
206 207 9.373450 AGACCTATCTGATGATGTGTATTTAGT 57.627 33.333 0.00 0.00 32.29 2.24
238 239 9.442047 AAATGTAAATGTTTTTCTCAACAACCA 57.558 25.926 0.00 0.00 40.07 3.67
239 240 9.612066 AATGTAAATGTTTTTCTCAACAACCAT 57.388 25.926 0.00 0.00 40.07 3.55
240 241 9.612066 ATGTAAATGTTTTTCTCAACAACCATT 57.388 25.926 0.00 0.00 40.07 3.16
244 245 8.871686 AATGTTTTTCTCAACAACCATTAGTC 57.128 30.769 0.00 0.00 40.07 2.59
245 246 7.397892 TGTTTTTCTCAACAACCATTAGTCA 57.602 32.000 0.00 0.00 33.60 3.41
246 247 7.831753 TGTTTTTCTCAACAACCATTAGTCAA 58.168 30.769 0.00 0.00 33.60 3.18
247 248 8.307483 TGTTTTTCTCAACAACCATTAGTCAAA 58.693 29.630 0.00 0.00 33.60 2.69
248 249 8.807581 GTTTTTCTCAACAACCATTAGTCAAAG 58.192 33.333 0.00 0.00 0.00 2.77
249 250 7.639113 TTTCTCAACAACCATTAGTCAAAGT 57.361 32.000 0.00 0.00 0.00 2.66
250 251 7.639113 TTCTCAACAACCATTAGTCAAAGTT 57.361 32.000 0.00 0.00 0.00 2.66
251 252 7.639113 TCTCAACAACCATTAGTCAAAGTTT 57.361 32.000 0.00 0.00 0.00 2.66
252 253 7.479980 TCTCAACAACCATTAGTCAAAGTTTG 58.520 34.615 9.44 9.44 0.00 2.93
253 254 7.122055 TCTCAACAACCATTAGTCAAAGTTTGT 59.878 33.333 15.08 0.00 0.00 2.83
254 255 8.282455 TCAACAACCATTAGTCAAAGTTTGTA 57.718 30.769 15.08 0.00 0.00 2.41
255 256 8.740906 TCAACAACCATTAGTCAAAGTTTGTAA 58.259 29.630 15.08 8.09 0.00 2.41
256 257 9.360093 CAACAACCATTAGTCAAAGTTTGTAAA 57.640 29.630 15.08 8.55 0.00 2.01
269 270 9.936759 TCAAAGTTTGTAAATTTTGACCTTTCT 57.063 25.926 18.19 0.00 44.38 2.52
284 285 9.747898 TTTGACCTTTCTAAAATTCTATAGGCA 57.252 29.630 0.00 0.00 0.00 4.75
285 286 8.732746 TGACCTTTCTAAAATTCTATAGGCAC 57.267 34.615 0.00 0.00 0.00 5.01
286 287 8.548877 TGACCTTTCTAAAATTCTATAGGCACT 58.451 33.333 0.00 0.00 46.37 4.40
306 307 9.160412 AGGCACTATATTATACTCCTTTGAACT 57.840 33.333 0.00 0.00 36.02 3.01
315 316 9.760077 ATTATACTCCTTTGAACTAATACCACG 57.240 33.333 0.00 0.00 0.00 4.94
316 317 5.733620 ACTCCTTTGAACTAATACCACGA 57.266 39.130 0.00 0.00 0.00 4.35
317 318 5.476614 ACTCCTTTGAACTAATACCACGAC 58.523 41.667 0.00 0.00 0.00 4.34
318 319 5.011329 ACTCCTTTGAACTAATACCACGACA 59.989 40.000 0.00 0.00 0.00 4.35
319 320 5.856156 TCCTTTGAACTAATACCACGACAA 58.144 37.500 0.00 0.00 0.00 3.18
320 321 5.929992 TCCTTTGAACTAATACCACGACAAG 59.070 40.000 0.00 0.00 0.00 3.16
321 322 5.699458 CCTTTGAACTAATACCACGACAAGT 59.301 40.000 0.00 0.00 0.00 3.16
322 323 6.869913 CCTTTGAACTAATACCACGACAAGTA 59.130 38.462 0.00 0.00 0.00 2.24
323 324 7.385752 CCTTTGAACTAATACCACGACAAGTAA 59.614 37.037 0.00 0.00 0.00 2.24
324 325 8.836268 TTTGAACTAATACCACGACAAGTAAT 57.164 30.769 0.00 0.00 0.00 1.89
325 326 8.836268 TTGAACTAATACCACGACAAGTAATT 57.164 30.769 0.00 0.00 0.00 1.40
326 327 8.836268 TGAACTAATACCACGACAAGTAATTT 57.164 30.769 0.00 0.00 0.00 1.82
327 328 8.714179 TGAACTAATACCACGACAAGTAATTTG 58.286 33.333 0.00 0.00 42.68 2.32
328 329 7.605410 ACTAATACCACGACAAGTAATTTGG 57.395 36.000 0.00 0.00 41.25 3.28
329 330 7.388437 ACTAATACCACGACAAGTAATTTGGA 58.612 34.615 0.00 0.00 41.25 3.53
330 331 7.879160 ACTAATACCACGACAAGTAATTTGGAA 59.121 33.333 0.00 0.00 41.25 3.53
331 332 7.696992 AATACCACGACAAGTAATTTGGAAT 57.303 32.000 0.00 0.00 41.25 3.01
332 333 5.371115 ACCACGACAAGTAATTTGGAATG 57.629 39.130 0.00 0.00 41.25 2.67
333 334 5.067273 ACCACGACAAGTAATTTGGAATGA 58.933 37.500 0.00 0.00 41.25 2.57
334 335 5.533154 ACCACGACAAGTAATTTGGAATGAA 59.467 36.000 0.00 0.00 41.25 2.57
335 336 6.086222 CCACGACAAGTAATTTGGAATGAAG 58.914 40.000 0.00 0.00 41.25 3.02
336 337 6.072728 CCACGACAAGTAATTTGGAATGAAGA 60.073 38.462 0.00 0.00 41.25 2.87
337 338 7.017645 CACGACAAGTAATTTGGAATGAAGAG 58.982 38.462 0.00 0.00 41.25 2.85
338 339 6.934645 ACGACAAGTAATTTGGAATGAAGAGA 59.065 34.615 0.00 0.00 41.25 3.10
339 340 7.118390 ACGACAAGTAATTTGGAATGAAGAGAG 59.882 37.037 0.00 0.00 41.25 3.20
340 341 7.118390 CGACAAGTAATTTGGAATGAAGAGAGT 59.882 37.037 0.00 0.00 41.25 3.24
341 342 9.436957 GACAAGTAATTTGGAATGAAGAGAGTA 57.563 33.333 0.00 0.00 41.25 2.59
342 343 9.442047 ACAAGTAATTTGGAATGAAGAGAGTAG 57.558 33.333 0.00 0.00 41.25 2.57
343 344 9.658799 CAAGTAATTTGGAATGAAGAGAGTAGA 57.341 33.333 0.00 0.00 32.95 2.59
345 346 9.660180 AGTAATTTGGAATGAAGAGAGTAGAAC 57.340 33.333 0.00 0.00 0.00 3.01
346 347 9.436957 GTAATTTGGAATGAAGAGAGTAGAACA 57.563 33.333 0.00 0.00 0.00 3.18
349 350 9.829507 ATTTGGAATGAAGAGAGTAGAACATAG 57.170 33.333 0.00 0.00 0.00 2.23
350 351 7.962995 TGGAATGAAGAGAGTAGAACATAGT 57.037 36.000 0.00 0.00 0.00 2.12
370 371 9.683069 ACATAGTTTTGACATTCAAACTTCATC 57.317 29.630 8.61 0.00 45.03 2.92
385 386 0.911769 TCATCGGTCAGAAGGGCAAT 59.088 50.000 0.00 0.00 0.00 3.56
400 401 3.977326 AGGGCAATCAAAACCCCTAAAAA 59.023 39.130 0.00 0.00 45.87 1.94
451 452 2.154462 CAAGAACGGAGGAAATGTGCT 58.846 47.619 0.00 0.00 0.00 4.40
462 463 4.922206 AGGAAATGTGCTCCTCAAATACA 58.078 39.130 0.00 0.00 39.16 2.29
465 466 5.450965 GGAAATGTGCTCCTCAAATACATGG 60.451 44.000 0.00 0.00 32.75 3.66
468 469 1.215173 TGCTCCTCAAATACATGGGGG 59.785 52.381 0.00 0.00 41.62 5.40
471 472 0.469892 CCTCAAATACATGGGGGCCC 60.470 60.000 15.76 15.76 37.30 5.80
473 474 0.555769 TCAAATACATGGGGGCCCTC 59.444 55.000 24.38 21.26 36.94 4.30
481 482 1.363530 ATGGGGGCCCTCATAAGTGG 61.364 60.000 37.12 0.00 36.94 4.00
511 512 6.312918 CGTAAGGTACAAGCATATGACAACTT 59.687 38.462 6.97 2.87 0.00 2.66
517 518 4.754618 ACAAGCATATGACAACTTCGAACA 59.245 37.500 6.97 0.00 0.00 3.18
523 524 8.511321 AGCATATGACAACTTCGAACATTTTTA 58.489 29.630 6.97 0.00 0.00 1.52
527 528 7.962934 TGACAACTTCGAACATTTTTAACAG 57.037 32.000 0.00 0.00 0.00 3.16
584 585 4.035017 GTCAAACATGACAACTTTCGTGG 58.965 43.478 0.00 0.00 36.90 4.94
587 588 2.218603 ACATGACAACTTTCGTGGGTC 58.781 47.619 0.00 0.00 36.90 4.46
589 590 2.404923 TGACAACTTTCGTGGGTCAA 57.595 45.000 0.00 0.00 36.16 3.18
590 591 2.925724 TGACAACTTTCGTGGGTCAAT 58.074 42.857 0.00 0.00 36.16 2.57
597 598 6.921307 ACAACTTTCGTGGGTCAATTTATTTC 59.079 34.615 0.00 0.00 0.00 2.17
601 602 9.020731 ACTTTCGTGGGTCAATTTATTTCTAAT 57.979 29.630 0.00 0.00 0.00 1.73
623 624 3.067106 AGAAACTTGCCGTATGTCACTG 58.933 45.455 0.00 0.00 0.00 3.66
624 625 2.831685 AACTTGCCGTATGTCACTGA 57.168 45.000 0.00 0.00 0.00 3.41
636 637 5.953777 CGTATGTCACTGAAAATTGTCATCG 59.046 40.000 0.00 0.00 0.00 3.84
653 654 5.464057 TGTCATCGTTACGTGACTGAAATTT 59.536 36.000 26.73 0.00 43.87 1.82
658 659 6.586751 TCGTTACGTGACTGAAATTTTCATC 58.413 36.000 12.04 11.69 39.30 2.92
707 820 3.221964 TCTCACATGTGACACTCATCG 57.778 47.619 24.56 12.25 35.46 3.84
1245 1369 4.456253 CCCGACGTCGAGGACACG 62.456 72.222 37.65 19.12 43.02 4.49
1358 1482 2.444895 GGGATCTCTCCGGTGGCT 60.445 66.667 0.00 0.00 43.11 4.75
1366 1490 3.302347 CTCCGGTGGCTCCTGTGTC 62.302 68.421 0.00 0.00 0.00 3.67
1455 1579 2.157738 GCAAGATTCAGTGAGCTGGTT 58.842 47.619 0.00 0.00 42.78 3.67
1530 1659 3.015327 AGCTCAATCAGTCAATCTTGGC 58.985 45.455 0.00 0.00 0.00 4.52
1676 1805 5.652891 TGGAGTACTTTGCAACCTAAAACAA 59.347 36.000 0.00 0.00 0.00 2.83
1677 1806 6.183360 TGGAGTACTTTGCAACCTAAAACAAG 60.183 38.462 0.00 0.00 0.00 3.16
1691 1820 6.040247 CCTAAAACAAGGAAGTCCACAAAAC 58.960 40.000 0.00 0.00 39.15 2.43
1692 1821 5.476091 AAAACAAGGAAGTCCACAAAACA 57.524 34.783 0.00 0.00 38.89 2.83
1720 1849 8.609478 AAATGAAAGTACAAACTGTTTACACG 57.391 30.769 5.31 0.00 35.62 4.49
1724 1853 5.338614 AGTACAAACTGTTTACACGATGC 57.661 39.130 5.31 0.00 33.57 3.91
1892 2177 9.184523 TGTTTATATCATTAAACCCCTGTTCTG 57.815 33.333 5.03 0.00 40.00 3.02
1901 2186 3.595190 ACCCCTGTTCTGTTTTTAGCT 57.405 42.857 0.00 0.00 0.00 3.32
1933 2218 8.915871 TCACACAGTTTATTACTCCGTATAAC 57.084 34.615 0.00 0.00 33.85 1.89
1947 2232 6.376299 ACTCCGTATAACATACTCTGTTCACA 59.624 38.462 0.00 0.00 44.99 3.58
2013 2298 6.013725 TGTCATACATTAGTGAACAGAGGGTT 60.014 38.462 0.00 0.00 44.10 4.11
2024 2309 5.467063 GTGAACAGAGGGTTTAAGTCTTCAG 59.533 44.000 0.00 0.00 40.63 3.02
2025 2310 4.009370 ACAGAGGGTTTAAGTCTTCAGC 57.991 45.455 0.00 0.00 0.00 4.26
2026 2311 3.648545 ACAGAGGGTTTAAGTCTTCAGCT 59.351 43.478 0.00 0.00 0.00 4.24
2027 2312 4.249661 CAGAGGGTTTAAGTCTTCAGCTC 58.750 47.826 0.00 0.00 0.00 4.09
2028 2313 4.020662 CAGAGGGTTTAAGTCTTCAGCTCT 60.021 45.833 0.00 0.00 0.00 4.09
2029 2314 5.186021 CAGAGGGTTTAAGTCTTCAGCTCTA 59.814 44.000 0.00 0.00 0.00 2.43
2030 2315 5.780793 AGAGGGTTTAAGTCTTCAGCTCTAA 59.219 40.000 0.00 0.00 0.00 2.10
2031 2316 6.043854 AGGGTTTAAGTCTTCAGCTCTAAG 57.956 41.667 0.00 0.00 0.00 2.18
2032 2317 5.780793 AGGGTTTAAGTCTTCAGCTCTAAGA 59.219 40.000 4.28 4.28 0.00 2.10
2033 2318 6.071051 AGGGTTTAAGTCTTCAGCTCTAAGAG 60.071 42.308 8.05 0.00 33.75 2.85
2042 2327 3.633573 GCTCTAAGAGCGTCTCCAC 57.366 57.895 0.00 0.00 45.85 4.02
2043 2328 1.099689 GCTCTAAGAGCGTCTCCACT 58.900 55.000 0.00 0.00 45.85 4.00
2044 2329 1.064952 GCTCTAAGAGCGTCTCCACTC 59.935 57.143 0.00 0.00 45.85 3.51
2045 2330 1.329292 CTCTAAGAGCGTCTCCACTCG 59.671 57.143 3.66 0.00 37.99 4.18
2395 2681 3.192922 CGACACCGGCCGATTTCC 61.193 66.667 30.73 10.56 0.00 3.13
2405 2691 0.456142 GCCGATTTCCCGCTGTTTTC 60.456 55.000 0.00 0.00 0.00 2.29
2423 2709 1.007607 TCCCCCTTTCCCTCCATTTC 58.992 55.000 0.00 0.00 0.00 2.17
2428 2714 1.342374 CCTTTCCCTCCATTTCCCCAG 60.342 57.143 0.00 0.00 0.00 4.45
2430 2716 0.704076 TTCCCTCCATTTCCCCAGTG 59.296 55.000 0.00 0.00 0.00 3.66
2433 2719 1.693640 CTCCATTTCCCCAGTGCCT 59.306 57.895 0.00 0.00 0.00 4.75
2457 2744 2.604686 TTCTCACCCGCTGCTCCT 60.605 61.111 0.00 0.00 0.00 3.69
2551 4211 4.927782 ACGCCAAGAGCAACGCCA 62.928 61.111 0.00 0.00 44.04 5.69
2573 4233 1.139853 CAAGAGGGAGGAGAAATCCGG 59.860 57.143 0.00 0.00 37.75 5.14
2574 4234 0.340208 AGAGGGAGGAGAAATCCGGT 59.660 55.000 0.00 0.00 37.75 5.28
2664 4326 3.438087 CGAAGAAGAGTAACACCGACCTA 59.562 47.826 0.00 0.00 0.00 3.08
2797 4474 1.389609 CCCTACGCCCACGACTATGT 61.390 60.000 0.00 0.00 43.93 2.29
2799 4482 0.736636 CTACGCCCACGACTATGTCA 59.263 55.000 0.00 0.00 43.93 3.58
2831 4514 2.568612 CTCGAGCACTGAAGCCGA 59.431 61.111 0.00 0.00 36.37 5.54
2832 4515 1.080501 CTCGAGCACTGAAGCCGAA 60.081 57.895 0.00 0.00 36.99 4.30
2872 4574 3.399181 CCTTGGCCAGCCCTACGA 61.399 66.667 5.11 0.00 34.56 3.43
2897 4608 0.723981 GAGCCTGTCGTTTGATGAGC 59.276 55.000 0.00 0.00 0.00 4.26
2928 4641 5.970640 TCTATGGTTCCTACCCTTTTGATCT 59.029 40.000 0.00 0.00 44.35 2.75
3162 4925 3.759618 AGCCGGAGATGCTCTAACTATAC 59.240 47.826 5.05 0.00 32.41 1.47
3202 4965 7.402811 GTGTTAGCACAATTTTAAGAAACCC 57.597 36.000 4.65 0.00 44.64 4.11
3224 4992 1.826054 TTGTTCCGCACCACAAGGG 60.826 57.895 0.00 0.00 44.81 3.95
3253 5021 1.377202 ATGCCGACAATGAACCGCT 60.377 52.632 0.00 0.00 0.00 5.52
3380 5149 4.020839 CCCATTTTCAAGAGCAAAGGTGAT 60.021 41.667 0.00 0.00 0.00 3.06
3553 5322 1.145803 GTTAGTGGCAGACGTCAACC 58.854 55.000 19.50 18.31 0.00 3.77
3561 5330 0.950836 CAGACGTCAACCATTTGCCA 59.049 50.000 19.50 0.00 32.17 4.92
3814 5586 5.128663 ACCATTTTAAGAAGCCTGTGTTGTT 59.871 36.000 0.00 0.00 0.00 2.83
4013 5785 5.697633 ACTGATCAAAAACATGAACCAATGC 59.302 36.000 0.00 0.00 32.06 3.56
4014 5786 5.856156 TGATCAAAAACATGAACCAATGCT 58.144 33.333 0.00 0.00 32.06 3.79
4042 5815 0.660488 TGCCAGTTGTTAGTTGTGCG 59.340 50.000 0.00 0.00 0.00 5.34
4137 5910 1.226746 GAAGAACAAGTGGGTGTCGG 58.773 55.000 0.00 0.00 0.00 4.79
4142 5915 1.999648 ACAAGTGGGTGTCGGTAGTA 58.000 50.000 0.00 0.00 0.00 1.82
4155 5928 3.441572 GTCGGTAGTAGCAGAGGTTAACA 59.558 47.826 8.10 0.00 0.00 2.41
4165 5938 4.768968 AGCAGAGGTTAACAATTTGCTGAT 59.231 37.500 20.39 9.27 38.82 2.90
4193 5966 0.032952 TTCGTGTGACCTGTAGTGGC 59.967 55.000 0.00 0.00 0.00 5.01
4226 5999 6.620877 ATCCGATTATTTAGCAGGTGGATA 57.379 37.500 0.00 0.00 32.20 2.59
4230 6003 6.878923 CCGATTATTTAGCAGGTGGATATGAA 59.121 38.462 0.00 0.00 0.00 2.57
4612 8275 3.320826 CACCAAGAGGGATTTTCCGTTTT 59.679 43.478 0.00 0.00 37.43 2.43
4785 8455 4.582869 TCTGTGTGTACGTCTGGTATACT 58.417 43.478 2.25 0.00 42.04 2.12
4812 8482 0.962356 CAACATGGGTCCCTGACTGC 60.962 60.000 10.00 0.00 32.47 4.40
4885 8738 3.030291 TGGGACAAGAATGCACAAAGTT 58.970 40.909 0.00 0.00 31.92 2.66
4892 8745 8.243426 GGACAAGAATGCACAAAGTTTGATATA 58.757 33.333 22.23 5.94 0.00 0.86
4970 8823 6.176014 ACATAAACTATAGGCCCAGTCTTC 57.824 41.667 0.00 0.00 0.00 2.87
5030 8883 4.688879 GCGCATACATATTACCTGCAGTTA 59.311 41.667 13.81 0.00 33.13 2.24
5053 8906 9.586435 GTTAATTTGGCAAGCTTAATCTATGTT 57.414 29.630 15.60 0.00 0.00 2.71
5081 8934 7.121911 CGAAATAGATGTTCATTGCTGTGTAG 58.878 38.462 0.00 0.00 0.00 2.74
5096 8949 3.402110 TGTGTAGTGAAAGCCATGTGAG 58.598 45.455 0.00 0.00 0.00 3.51
5104 8957 1.696063 AAGCCATGTGAGTGTTTGCT 58.304 45.000 0.00 0.00 0.00 3.91
5299 9152 6.660521 TCTGAAAATGGTGCTGATTATTGACT 59.339 34.615 0.00 0.00 0.00 3.41
5312 9165 7.570140 GCTGATTATTGACTATGATTCGTGTGG 60.570 40.741 0.00 0.00 0.00 4.17
5331 9184 1.617740 GCACTTTTCTATTGCGTGGC 58.382 50.000 0.00 0.00 0.00 5.01
5339 9192 5.734855 TTTCTATTGCGTGGCTCTTATTC 57.265 39.130 0.00 0.00 0.00 1.75
5434 9287 5.961272 ACAAAATTTTCCTCGTCTTTGTGT 58.039 33.333 0.00 0.00 36.07 3.72
5439 9292 6.877611 ATTTTCCTCGTCTTTGTGTTGTAT 57.122 33.333 0.00 0.00 0.00 2.29
5565 9418 0.179062 GCTCTGATGATTGGAGGCGT 60.179 55.000 0.00 0.00 0.00 5.68
5736 9589 3.317603 AATGTGCAGGTTATTTGTGGC 57.682 42.857 0.00 0.00 0.00 5.01
5746 9599 3.305110 GTTATTTGTGGCGTCTTTGTGG 58.695 45.455 0.00 0.00 0.00 4.17
5763 9616 1.199097 GTGGGTGTAATGACTTTGGCG 59.801 52.381 0.00 0.00 0.00 5.69
5802 9655 5.428253 GTCTGGCATGTTTACCTCATCTTA 58.572 41.667 0.00 0.00 0.00 2.10
5846 9699 5.652452 AGGTTTGAAAAATAGGATCCCTTCG 59.348 40.000 8.55 0.00 34.61 3.79
6122 9976 3.396685 AGCCTCTCTAAGTCCATGACT 57.603 47.619 0.00 0.00 45.64 3.41
6124 9978 2.482839 GCCTCTCTAAGTCCATGACTGC 60.483 54.545 0.00 0.00 42.59 4.40
6457 10315 0.184451 CTTGATAGTGGGGGCATGCT 59.816 55.000 18.92 0.00 0.00 3.79
6477 10341 1.862201 TCGCGCGTTCCTAAAATATGG 59.138 47.619 30.98 0.00 0.00 2.74
6481 10345 3.311596 GCGCGTTCCTAAAATATGGACTT 59.688 43.478 8.43 0.00 31.24 3.01
6651 10517 2.351835 CCTGTATCGAGGAACATAGGCG 60.352 54.545 0.00 0.00 34.69 5.52
6692 10558 5.396654 CACATCGTATGATATTCCGCTATCG 59.603 44.000 0.00 0.00 32.18 2.92
6772 10638 5.869579 AGCGTATATTGTGGGATCAAATCT 58.130 37.500 0.00 0.00 0.00 2.40
6829 10695 2.159114 GGCTGAGGAGCTTCAAGAGTAG 60.159 54.545 0.00 0.00 45.44 2.57
6867 10733 6.284459 CAGGGATGTATCTGGAGTTAGAAAC 58.716 44.000 0.00 0.00 0.00 2.78
7144 11136 7.389330 TGTTGTGTTATAGATGTTGAATCCGTT 59.611 33.333 0.00 0.00 0.00 4.44
7197 11191 0.723414 CTACGCATGCTTGTGACCAG 59.277 55.000 17.13 9.23 36.82 4.00
7222 11216 2.136026 AGGGTTTTTCCTGGTCAGACT 58.864 47.619 0.00 0.00 35.47 3.24
7236 11230 0.538057 CAGACTGGAAAGCAGGCCAA 60.538 55.000 5.01 0.00 32.95 4.52
7242 11236 3.069289 CTGGAAAGCAGGCCAATTTTTC 58.931 45.455 5.01 9.34 32.95 2.29
7258 11252 6.424509 CCAATTTTTCTGAAACTTATGCAGCA 59.575 34.615 0.00 0.00 0.00 4.41
7284 11278 0.812811 GCATGAGAAGCTGCGATGGA 60.813 55.000 0.00 0.00 0.00 3.41
7323 11878 8.816640 TTCAAATTCAATTTAGGAGCTGTTTC 57.183 30.769 0.00 0.00 0.00 2.78
7334 11889 1.115326 AGCTGTTTCCCTTGTTGGCC 61.115 55.000 0.00 0.00 0.00 5.36
7336 11891 0.821711 CTGTTTCCCTTGTTGGCCGA 60.822 55.000 0.00 0.00 0.00 5.54
7351 11906 3.995526 CCGAAGGCTGCTATGATCA 57.004 52.632 0.00 0.00 46.14 2.92
7352 11907 2.469274 CCGAAGGCTGCTATGATCAT 57.531 50.000 13.81 13.81 46.14 2.45
7353 11908 2.344950 CCGAAGGCTGCTATGATCATC 58.655 52.381 12.53 0.00 46.14 2.92
7354 11909 1.991264 CGAAGGCTGCTATGATCATCG 59.009 52.381 12.53 7.22 0.00 3.84
7355 11910 2.352127 CGAAGGCTGCTATGATCATCGA 60.352 50.000 12.53 0.00 0.00 3.59
7356 11911 3.657634 GAAGGCTGCTATGATCATCGAA 58.342 45.455 12.53 0.00 0.00 3.71
7358 11913 2.072298 GGCTGCTATGATCATCGAACC 58.928 52.381 12.53 5.27 0.00 3.62
7359 11914 1.723542 GCTGCTATGATCATCGAACCG 59.276 52.381 12.53 0.00 0.00 4.44
7360 11915 2.608016 GCTGCTATGATCATCGAACCGA 60.608 50.000 12.53 0.00 41.13 4.69
7362 11917 3.642705 TGCTATGATCATCGAACCGAAG 58.357 45.455 12.53 2.39 39.99 3.79
7363 11918 3.068165 TGCTATGATCATCGAACCGAAGT 59.932 43.478 12.53 0.00 39.99 3.01
7366 11921 5.334957 GCTATGATCATCGAACCGAAGTAGA 60.335 44.000 12.53 0.00 39.99 2.59
7367 11922 4.976224 TGATCATCGAACCGAAGTAGAA 57.024 40.909 0.00 0.00 39.99 2.10
7368 11923 4.669318 TGATCATCGAACCGAAGTAGAAC 58.331 43.478 0.00 0.00 39.99 3.01
7372 11927 3.826236 TCGAACCGAAGTAGAACTGAG 57.174 47.619 0.00 0.00 31.06 3.35
7373 11928 2.095364 TCGAACCGAAGTAGAACTGAGC 60.095 50.000 0.00 0.00 31.06 4.26
7374 11929 2.095161 CGAACCGAAGTAGAACTGAGCT 60.095 50.000 0.00 0.00 0.00 4.09
7377 11932 2.891580 ACCGAAGTAGAACTGAGCTCAA 59.108 45.455 18.85 0.00 0.00 3.02
7379 11934 4.021016 ACCGAAGTAGAACTGAGCTCAAAT 60.021 41.667 18.85 9.33 0.00 2.32
7381 11936 4.201666 CGAAGTAGAACTGAGCTCAAATGC 60.202 45.833 18.85 7.70 0.00 3.56
7383 11938 2.462456 AGAACTGAGCTCAAATGCGA 57.538 45.000 18.85 0.00 38.13 5.10
7384 11939 2.344950 AGAACTGAGCTCAAATGCGAG 58.655 47.619 18.85 6.60 38.13 5.03
7393 11948 3.874400 CTCAAATGCGAGCATAAGAGG 57.126 47.619 21.69 8.80 35.58 3.69
7394 11949 3.461061 CTCAAATGCGAGCATAAGAGGA 58.539 45.455 21.69 11.50 35.58 3.71
7396 11951 3.118629 TCAAATGCGAGCATAAGAGGACT 60.119 43.478 11.25 0.00 35.31 3.85
7411 11966 0.670854 GGACTGCCTCAAAGGACGTC 60.671 60.000 7.13 7.13 37.67 4.34
7412 11967 0.318762 GACTGCCTCAAAGGACGTCT 59.681 55.000 16.46 0.00 37.67 4.18
7413 11968 0.759346 ACTGCCTCAAAGGACGTCTT 59.241 50.000 16.46 4.52 37.67 3.01
7414 11969 1.141053 ACTGCCTCAAAGGACGTCTTT 59.859 47.619 16.46 11.86 45.85 2.52
7415 11970 2.222027 CTGCCTCAAAGGACGTCTTTT 58.778 47.619 18.86 18.86 42.62 2.27
7418 11973 2.287009 GCCTCAAAGGACGTCTTTTGTG 60.287 50.000 36.77 34.19 42.62 3.33
7419 11974 3.202906 CCTCAAAGGACGTCTTTTGTGA 58.797 45.455 36.36 25.74 42.62 3.58
7420 11975 3.625764 CCTCAAAGGACGTCTTTTGTGAA 59.374 43.478 36.36 24.77 42.62 3.18
7421 11976 4.495844 CCTCAAAGGACGTCTTTTGTGAAC 60.496 45.833 36.36 13.65 42.62 3.18
7422 11977 4.004314 TCAAAGGACGTCTTTTGTGAACA 58.996 39.130 36.77 23.15 42.62 3.18
7424 11979 5.818336 TCAAAGGACGTCTTTTGTGAACATA 59.182 36.000 36.77 22.03 42.62 2.29
7427 11982 4.154195 AGGACGTCTTTTGTGAACATATGC 59.846 41.667 16.46 0.00 0.00 3.14
7429 11984 5.391950 GGACGTCTTTTGTGAACATATGCAT 60.392 40.000 16.46 3.79 0.00 3.96
7430 11985 5.631026 ACGTCTTTTGTGAACATATGCATC 58.369 37.500 0.19 2.34 0.00 3.91
7434 11989 7.533426 GTCTTTTGTGAACATATGCATCTTCT 58.467 34.615 0.19 0.00 0.00 2.85
7435 11990 8.025445 GTCTTTTGTGAACATATGCATCTTCTT 58.975 33.333 0.19 0.00 0.00 2.52
7436 11991 9.230122 TCTTTTGTGAACATATGCATCTTCTTA 57.770 29.630 0.19 0.00 0.00 2.10
7442 11997 8.834465 GTGAACATATGCATCTTCTTATTCTGT 58.166 33.333 0.19 0.00 0.00 3.41
7455 12010 9.216117 TCTTCTTATTCTGTAGTTTTTACAGCC 57.784 33.333 8.99 0.00 43.30 4.85
7456 12011 8.911918 TTCTTATTCTGTAGTTTTTACAGCCA 57.088 30.769 8.99 0.54 43.30 4.75
7457 12012 8.547967 TCTTATTCTGTAGTTTTTACAGCCAG 57.452 34.615 8.99 3.70 43.30 4.85
7458 12013 8.372459 TCTTATTCTGTAGTTTTTACAGCCAGA 58.628 33.333 8.99 5.47 43.30 3.86
7459 12014 9.167311 CTTATTCTGTAGTTTTTACAGCCAGAT 57.833 33.333 8.99 4.48 43.30 2.90
7460 12015 6.801539 TTCTGTAGTTTTTACAGCCAGATG 57.198 37.500 8.99 0.00 43.30 2.90
7461 12016 6.109156 TCTGTAGTTTTTACAGCCAGATGA 57.891 37.500 8.99 0.00 43.30 2.92
7462 12017 6.166279 TCTGTAGTTTTTACAGCCAGATGAG 58.834 40.000 8.99 0.00 43.30 2.90
7463 12018 5.245531 TGTAGTTTTTACAGCCAGATGAGG 58.754 41.667 0.00 0.00 0.00 3.86
7476 12031 5.593679 CCAGATGAGGCAATGAGAAAAAT 57.406 39.130 0.00 0.00 0.00 1.82
7477 12032 5.974108 CCAGATGAGGCAATGAGAAAAATT 58.026 37.500 0.00 0.00 0.00 1.82
7478 12033 7.104043 CCAGATGAGGCAATGAGAAAAATTA 57.896 36.000 0.00 0.00 0.00 1.40
7479 12034 7.723324 CCAGATGAGGCAATGAGAAAAATTAT 58.277 34.615 0.00 0.00 0.00 1.28
7480 12035 8.202137 CCAGATGAGGCAATGAGAAAAATTATT 58.798 33.333 0.00 0.00 0.00 1.40
7481 12036 9.245962 CAGATGAGGCAATGAGAAAAATTATTC 57.754 33.333 0.00 0.00 0.00 1.75
7482 12037 8.419442 AGATGAGGCAATGAGAAAAATTATTCC 58.581 33.333 0.00 0.00 0.00 3.01
7483 12038 7.479352 TGAGGCAATGAGAAAAATTATTCCA 57.521 32.000 0.00 0.00 0.00 3.53
7484 12039 7.905265 TGAGGCAATGAGAAAAATTATTCCAA 58.095 30.769 0.00 0.00 0.00 3.53
7485 12040 8.036575 TGAGGCAATGAGAAAAATTATTCCAAG 58.963 33.333 0.00 0.00 0.00 3.61
7486 12041 6.820152 AGGCAATGAGAAAAATTATTCCAAGC 59.180 34.615 0.00 0.00 0.00 4.01
7487 12042 6.037500 GGCAATGAGAAAAATTATTCCAAGCC 59.962 38.462 0.00 0.00 33.42 4.35
7488 12043 6.037500 GCAATGAGAAAAATTATTCCAAGCCC 59.962 38.462 0.00 0.00 0.00 5.19
7489 12044 7.333323 CAATGAGAAAAATTATTCCAAGCCCT 58.667 34.615 0.00 0.00 0.00 5.19
7490 12045 6.530019 TGAGAAAAATTATTCCAAGCCCTC 57.470 37.500 0.00 0.00 0.00 4.30
7491 12046 6.015918 TGAGAAAAATTATTCCAAGCCCTCA 58.984 36.000 0.00 0.00 0.00 3.86
7492 12047 6.071391 TGAGAAAAATTATTCCAAGCCCTCAC 60.071 38.462 0.00 0.00 0.00 3.51
7493 12048 5.187772 AGAAAAATTATTCCAAGCCCTCACC 59.812 40.000 0.00 0.00 0.00 4.02
7494 12049 2.348411 ATTATTCCAAGCCCTCACCG 57.652 50.000 0.00 0.00 0.00 4.94
7495 12050 0.254747 TTATTCCAAGCCCTCACCGG 59.745 55.000 0.00 0.00 0.00 5.28
7502 12057 4.796495 GCCCTCACCGGCGGATTT 62.796 66.667 35.78 7.50 39.64 2.17
7503 12058 2.904905 CCCTCACCGGCGGATTTA 59.095 61.111 35.78 13.30 0.00 1.40
7504 12059 1.523032 CCCTCACCGGCGGATTTAC 60.523 63.158 35.78 0.00 0.00 2.01
7505 12060 1.881252 CCTCACCGGCGGATTTACG 60.881 63.158 35.78 13.57 0.00 3.18
7515 12070 1.006832 CGGATTTACGCAAGGACAGG 58.993 55.000 0.00 0.00 46.39 4.00
7516 12071 1.674817 CGGATTTACGCAAGGACAGGT 60.675 52.381 0.00 0.00 46.39 4.00
7517 12072 2.417651 CGGATTTACGCAAGGACAGGTA 60.418 50.000 0.00 0.00 46.39 3.08
7518 12073 3.195661 GGATTTACGCAAGGACAGGTAG 58.804 50.000 0.00 0.00 46.39 3.18
7519 12074 2.088950 TTTACGCAAGGACAGGTAGC 57.911 50.000 0.00 0.00 46.39 3.58
7521 12076 2.509336 CGCAAGGACAGGTAGCGG 60.509 66.667 0.00 0.00 44.20 5.52
7522 12077 2.978824 GCAAGGACAGGTAGCGGA 59.021 61.111 0.00 0.00 0.00 5.54
7523 12078 1.448013 GCAAGGACAGGTAGCGGAC 60.448 63.158 0.00 0.00 0.00 4.79
7524 12079 1.889530 GCAAGGACAGGTAGCGGACT 61.890 60.000 0.00 0.00 0.00 3.85
7525 12080 0.608640 CAAGGACAGGTAGCGGACTT 59.391 55.000 0.00 0.44 0.00 3.01
7526 12081 1.002087 CAAGGACAGGTAGCGGACTTT 59.998 52.381 0.00 0.00 0.00 2.66
7527 12082 0.608640 AGGACAGGTAGCGGACTTTG 59.391 55.000 0.00 0.00 0.00 2.77
7528 12083 0.320697 GGACAGGTAGCGGACTTTGT 59.679 55.000 0.00 0.00 0.00 2.83
7535 12090 2.809696 GGTAGCGGACTTTGTTTTAGCA 59.190 45.455 0.00 0.00 0.00 3.49
7546 12101 6.438763 ACTTTGTTTTAGCAGTGAATACAGC 58.561 36.000 0.00 0.00 39.38 4.40
7548 12103 6.384258 TTGTTTTAGCAGTGAATACAGCAA 57.616 33.333 0.00 0.00 41.31 3.91
7553 12108 2.816087 AGCAGTGAATACAGCAACCAAG 59.184 45.455 0.00 0.00 41.31 3.61
7570 12125 9.023962 AGCAACCAAGATGATTAAAATTACAGA 57.976 29.630 0.00 0.00 0.00 3.41
7605 12413 1.200020 CCAATCGTCTGAAACCAAGCC 59.800 52.381 0.00 0.00 0.00 4.35
7609 12417 3.695830 TCGTCTGAAACCAAGCCTAAT 57.304 42.857 0.00 0.00 0.00 1.73
7708 12516 2.364002 GGAGGCTCTGAATCTAGACCAC 59.636 54.545 15.23 0.00 0.00 4.16
7710 12518 3.704061 GAGGCTCTGAATCTAGACCACTT 59.296 47.826 7.40 0.00 0.00 3.16
7715 12523 5.407407 TCTGAATCTAGACCACTTTCACC 57.593 43.478 0.00 0.00 0.00 4.02
7716 12524 5.087323 TCTGAATCTAGACCACTTTCACCT 58.913 41.667 0.00 0.00 0.00 4.00
7717 12525 5.544176 TCTGAATCTAGACCACTTTCACCTT 59.456 40.000 0.00 0.00 0.00 3.50
7718 12526 5.794894 TGAATCTAGACCACTTTCACCTTC 58.205 41.667 0.00 0.00 0.00 3.46
7719 12527 4.828072 ATCTAGACCACTTTCACCTTCC 57.172 45.455 0.00 0.00 0.00 3.46
7720 12528 3.858135 TCTAGACCACTTTCACCTTCCT 58.142 45.455 0.00 0.00 0.00 3.36
7721 12529 3.833070 TCTAGACCACTTTCACCTTCCTC 59.167 47.826 0.00 0.00 0.00 3.71
7722 12530 2.695585 AGACCACTTTCACCTTCCTCT 58.304 47.619 0.00 0.00 0.00 3.69
7723 12531 2.635427 AGACCACTTTCACCTTCCTCTC 59.365 50.000 0.00 0.00 0.00 3.20
7724 12532 2.635427 GACCACTTTCACCTTCCTCTCT 59.365 50.000 0.00 0.00 0.00 3.10
7725 12533 3.049344 ACCACTTTCACCTTCCTCTCTT 58.951 45.455 0.00 0.00 0.00 2.85
7726 12534 3.071747 ACCACTTTCACCTTCCTCTCTTC 59.928 47.826 0.00 0.00 0.00 2.87
7727 12535 3.558109 CCACTTTCACCTTCCTCTCTTCC 60.558 52.174 0.00 0.00 0.00 3.46
7728 12536 3.326297 CACTTTCACCTTCCTCTCTTCCT 59.674 47.826 0.00 0.00 0.00 3.36
7729 12537 3.580895 ACTTTCACCTTCCTCTCTTCCTC 59.419 47.826 0.00 0.00 0.00 3.71
7730 12538 3.551635 TTCACCTTCCTCTCTTCCTCT 57.448 47.619 0.00 0.00 0.00 3.69
7731 12539 3.094484 TCACCTTCCTCTCTTCCTCTC 57.906 52.381 0.00 0.00 0.00 3.20
7732 12540 2.652348 TCACCTTCCTCTCTTCCTCTCT 59.348 50.000 0.00 0.00 0.00 3.10
7733 12541 3.076785 TCACCTTCCTCTCTTCCTCTCTT 59.923 47.826 0.00 0.00 0.00 2.85
7734 12542 3.195396 CACCTTCCTCTCTTCCTCTCTTG 59.805 52.174 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.322769 ACTTATATTTATGAACGGAGGGAGTAT 57.677 33.333 0.00 0.00 0.00 2.12
6 7 8.716674 ACTTATATTTATGAACGGAGGGAGTA 57.283 34.615 0.00 0.00 0.00 2.59
7 8 7.509659 AGACTTATATTTATGAACGGAGGGAGT 59.490 37.037 0.00 0.00 0.00 3.85
8 9 7.897864 AGACTTATATTTATGAACGGAGGGAG 58.102 38.462 0.00 0.00 0.00 4.30
9 10 7.850935 AGACTTATATTTATGAACGGAGGGA 57.149 36.000 0.00 0.00 0.00 4.20
10 11 8.904099 AAAGACTTATATTTATGAACGGAGGG 57.096 34.615 0.00 0.00 0.00 4.30
85 86 8.207545 GGAGTAAAATGAGTGGATCTACATTCT 58.792 37.037 12.16 0.00 32.84 2.40
86 87 7.169982 CGGAGTAAAATGAGTGGATCTACATTC 59.830 40.741 12.16 1.87 32.84 2.67
87 88 6.986817 CGGAGTAAAATGAGTGGATCTACATT 59.013 38.462 12.16 0.70 34.99 2.71
88 89 6.323996 TCGGAGTAAAATGAGTGGATCTACAT 59.676 38.462 12.16 0.00 0.00 2.29
89 90 5.655090 TCGGAGTAAAATGAGTGGATCTACA 59.345 40.000 12.16 0.00 0.00 2.74
90 91 6.145338 TCGGAGTAAAATGAGTGGATCTAC 57.855 41.667 0.00 0.00 0.00 2.59
91 92 6.785337 TTCGGAGTAAAATGAGTGGATCTA 57.215 37.500 0.00 0.00 0.00 1.98
92 93 5.677319 TTCGGAGTAAAATGAGTGGATCT 57.323 39.130 0.00 0.00 0.00 2.75
93 94 5.817816 ACATTCGGAGTAAAATGAGTGGATC 59.182 40.000 2.36 0.00 36.57 3.36
94 95 5.745227 ACATTCGGAGTAAAATGAGTGGAT 58.255 37.500 2.36 0.00 36.57 3.41
95 96 5.160607 ACATTCGGAGTAAAATGAGTGGA 57.839 39.130 2.36 0.00 36.57 4.02
96 97 6.106673 ACTACATTCGGAGTAAAATGAGTGG 58.893 40.000 2.36 0.00 36.57 4.00
97 98 6.255887 GGACTACATTCGGAGTAAAATGAGTG 59.744 42.308 2.36 0.00 36.57 3.51
98 99 6.338937 GGACTACATTCGGAGTAAAATGAGT 58.661 40.000 2.36 2.26 36.57 3.41
99 100 5.753921 GGGACTACATTCGGAGTAAAATGAG 59.246 44.000 2.36 0.00 36.57 2.90
100 101 5.424252 AGGGACTACATTCGGAGTAAAATGA 59.576 40.000 2.36 0.00 36.02 2.57
101 102 5.671493 AGGGACTACATTCGGAGTAAAATG 58.329 41.667 0.00 0.00 36.02 2.32
102 103 5.952347 AGGGACTACATTCGGAGTAAAAT 57.048 39.130 0.00 0.00 36.02 1.82
153 154 9.442047 CTTTCATATTGTACTTCCTCTGTTTCT 57.558 33.333 0.00 0.00 0.00 2.52
154 155 9.436957 TCTTTCATATTGTACTTCCTCTGTTTC 57.563 33.333 0.00 0.00 0.00 2.78
155 156 9.442047 CTCTTTCATATTGTACTTCCTCTGTTT 57.558 33.333 0.00 0.00 0.00 2.83
156 157 8.816894 TCTCTTTCATATTGTACTTCCTCTGTT 58.183 33.333 0.00 0.00 0.00 3.16
157 158 8.254508 GTCTCTTTCATATTGTACTTCCTCTGT 58.745 37.037 0.00 0.00 0.00 3.41
158 159 7.708752 GGTCTCTTTCATATTGTACTTCCTCTG 59.291 40.741 0.00 0.00 0.00 3.35
159 160 7.621683 AGGTCTCTTTCATATTGTACTTCCTCT 59.378 37.037 0.00 0.00 0.00 3.69
160 161 7.787028 AGGTCTCTTTCATATTGTACTTCCTC 58.213 38.462 0.00 0.00 0.00 3.71
161 162 7.741554 AGGTCTCTTTCATATTGTACTTCCT 57.258 36.000 0.00 0.00 0.00 3.36
162 163 9.699703 GATAGGTCTCTTTCATATTGTACTTCC 57.300 37.037 0.00 0.00 0.00 3.46
165 166 9.647918 TCAGATAGGTCTCTTTCATATTGTACT 57.352 33.333 0.00 0.00 30.42 2.73
168 169 9.152327 TCATCAGATAGGTCTCTTTCATATTGT 57.848 33.333 0.00 0.00 30.42 2.71
171 172 9.324008 ACATCATCAGATAGGTCTCTTTCATAT 57.676 33.333 0.00 0.00 31.88 1.78
172 173 8.583296 CACATCATCAGATAGGTCTCTTTCATA 58.417 37.037 0.00 0.00 31.88 2.15
173 174 7.070946 ACACATCATCAGATAGGTCTCTTTCAT 59.929 37.037 0.00 0.00 31.88 2.57
174 175 6.382282 ACACATCATCAGATAGGTCTCTTTCA 59.618 38.462 0.00 0.00 31.88 2.69
175 176 6.815089 ACACATCATCAGATAGGTCTCTTTC 58.185 40.000 0.00 0.00 31.88 2.62
176 177 6.805016 ACACATCATCAGATAGGTCTCTTT 57.195 37.500 0.00 0.00 31.88 2.52
177 178 8.489676 AATACACATCATCAGATAGGTCTCTT 57.510 34.615 0.00 0.00 31.88 2.85
178 179 8.489676 AAATACACATCATCAGATAGGTCTCT 57.510 34.615 0.00 0.00 31.88 3.10
179 180 9.853555 CTAAATACACATCATCAGATAGGTCTC 57.146 37.037 0.00 0.00 31.88 3.36
180 181 9.373450 ACTAAATACACATCATCAGATAGGTCT 57.627 33.333 0.00 0.00 31.88 3.85
212 213 9.442047 TGGTTGTTGAGAAAAACATTTACATTT 57.558 25.926 0.00 0.00 39.68 2.32
213 214 9.612066 ATGGTTGTTGAGAAAAACATTTACATT 57.388 25.926 0.00 0.00 39.68 2.71
214 215 9.612066 AATGGTTGTTGAGAAAAACATTTACAT 57.388 25.926 0.00 0.00 40.00 2.29
218 219 9.313118 GACTAATGGTTGTTGAGAAAAACATTT 57.687 29.630 4.20 0.00 40.00 2.32
219 220 8.474025 TGACTAATGGTTGTTGAGAAAAACATT 58.526 29.630 4.31 4.31 44.00 2.71
220 221 8.006298 TGACTAATGGTTGTTGAGAAAAACAT 57.994 30.769 0.00 0.00 39.68 2.71
221 222 7.397892 TGACTAATGGTTGTTGAGAAAAACA 57.602 32.000 0.00 0.00 38.26 2.83
222 223 8.696410 TTTGACTAATGGTTGTTGAGAAAAAC 57.304 30.769 0.00 0.00 0.00 2.43
223 224 8.527810 ACTTTGACTAATGGTTGTTGAGAAAAA 58.472 29.630 0.00 0.00 0.00 1.94
224 225 8.062065 ACTTTGACTAATGGTTGTTGAGAAAA 57.938 30.769 0.00 0.00 0.00 2.29
225 226 7.639113 ACTTTGACTAATGGTTGTTGAGAAA 57.361 32.000 0.00 0.00 0.00 2.52
226 227 7.639113 AACTTTGACTAATGGTTGTTGAGAA 57.361 32.000 0.00 0.00 0.00 2.87
227 228 7.122055 ACAAACTTTGACTAATGGTTGTTGAGA 59.878 33.333 8.55 0.00 44.62 3.27
228 229 7.257722 ACAAACTTTGACTAATGGTTGTTGAG 58.742 34.615 8.55 0.00 44.62 3.02
229 230 7.164230 ACAAACTTTGACTAATGGTTGTTGA 57.836 32.000 8.55 0.00 44.62 3.18
230 231 8.918961 TTACAAACTTTGACTAATGGTTGTTG 57.081 30.769 8.55 0.00 44.62 3.33
243 244 9.936759 AGAAAGGTCAAAATTTACAAACTTTGA 57.063 25.926 8.55 7.11 35.88 2.69
258 259 9.747898 TGCCTATAGAATTTTAGAAAGGTCAAA 57.252 29.630 0.00 0.00 0.00 2.69
259 260 9.174166 GTGCCTATAGAATTTTAGAAAGGTCAA 57.826 33.333 0.00 0.00 0.00 3.18
260 261 8.548877 AGTGCCTATAGAATTTTAGAAAGGTCA 58.451 33.333 0.00 0.00 0.00 4.02
261 262 8.966069 AGTGCCTATAGAATTTTAGAAAGGTC 57.034 34.615 0.00 0.00 0.00 3.85
280 281 9.160412 AGTTCAAAGGAGTATAATATAGTGCCT 57.840 33.333 3.45 2.83 0.00 4.75
289 290 9.760077 CGTGGTATTAGTTCAAAGGAGTATAAT 57.240 33.333 0.00 0.00 0.00 1.28
290 291 8.970020 TCGTGGTATTAGTTCAAAGGAGTATAA 58.030 33.333 0.00 0.00 0.00 0.98
291 292 8.408601 GTCGTGGTATTAGTTCAAAGGAGTATA 58.591 37.037 0.00 0.00 0.00 1.47
292 293 7.093640 TGTCGTGGTATTAGTTCAAAGGAGTAT 60.094 37.037 0.00 0.00 0.00 2.12
293 294 6.209192 TGTCGTGGTATTAGTTCAAAGGAGTA 59.791 38.462 0.00 0.00 0.00 2.59
294 295 5.011329 TGTCGTGGTATTAGTTCAAAGGAGT 59.989 40.000 0.00 0.00 0.00 3.85
295 296 5.475719 TGTCGTGGTATTAGTTCAAAGGAG 58.524 41.667 0.00 0.00 0.00 3.69
296 297 5.471556 TGTCGTGGTATTAGTTCAAAGGA 57.528 39.130 0.00 0.00 0.00 3.36
297 298 5.699458 ACTTGTCGTGGTATTAGTTCAAAGG 59.301 40.000 0.00 0.00 0.00 3.11
298 299 6.780706 ACTTGTCGTGGTATTAGTTCAAAG 57.219 37.500 0.00 0.00 0.00 2.77
299 300 8.836268 ATTACTTGTCGTGGTATTAGTTCAAA 57.164 30.769 0.00 0.00 0.00 2.69
300 301 8.836268 AATTACTTGTCGTGGTATTAGTTCAA 57.164 30.769 0.00 0.00 0.00 2.69
301 302 8.714179 CAAATTACTTGTCGTGGTATTAGTTCA 58.286 33.333 0.00 0.00 0.00 3.18
302 303 8.173130 CCAAATTACTTGTCGTGGTATTAGTTC 58.827 37.037 0.00 0.00 32.65 3.01
303 304 7.879160 TCCAAATTACTTGTCGTGGTATTAGTT 59.121 33.333 0.00 0.00 32.65 2.24
304 305 7.388437 TCCAAATTACTTGTCGTGGTATTAGT 58.612 34.615 0.00 0.00 32.65 2.24
305 306 7.837202 TCCAAATTACTTGTCGTGGTATTAG 57.163 36.000 0.00 0.00 32.65 1.73
306 307 8.670135 CATTCCAAATTACTTGTCGTGGTATTA 58.330 33.333 0.00 0.00 32.65 0.98
307 308 7.392113 TCATTCCAAATTACTTGTCGTGGTATT 59.608 33.333 0.00 0.00 32.65 1.89
308 309 6.882140 TCATTCCAAATTACTTGTCGTGGTAT 59.118 34.615 0.00 0.00 32.65 2.73
309 310 6.231951 TCATTCCAAATTACTTGTCGTGGTA 58.768 36.000 0.00 0.00 32.65 3.25
310 311 5.067273 TCATTCCAAATTACTTGTCGTGGT 58.933 37.500 0.00 0.00 32.65 4.16
311 312 5.621197 TCATTCCAAATTACTTGTCGTGG 57.379 39.130 0.00 0.00 32.65 4.94
312 313 6.898041 TCTTCATTCCAAATTACTTGTCGTG 58.102 36.000 0.00 0.00 32.65 4.35
313 314 6.934645 TCTCTTCATTCCAAATTACTTGTCGT 59.065 34.615 0.00 0.00 32.65 4.34
314 315 7.118390 ACTCTCTTCATTCCAAATTACTTGTCG 59.882 37.037 0.00 0.00 32.65 4.35
315 316 8.329203 ACTCTCTTCATTCCAAATTACTTGTC 57.671 34.615 0.00 0.00 32.65 3.18
316 317 9.442047 CTACTCTCTTCATTCCAAATTACTTGT 57.558 33.333 0.00 0.00 32.65 3.16
317 318 9.658799 TCTACTCTCTTCATTCCAAATTACTTG 57.341 33.333 0.00 0.00 34.52 3.16
319 320 9.660180 GTTCTACTCTCTTCATTCCAAATTACT 57.340 33.333 0.00 0.00 0.00 2.24
320 321 9.436957 TGTTCTACTCTCTTCATTCCAAATTAC 57.563 33.333 0.00 0.00 0.00 1.89
323 324 9.829507 CTATGTTCTACTCTCTTCATTCCAAAT 57.170 33.333 0.00 0.00 0.00 2.32
324 325 8.816894 ACTATGTTCTACTCTCTTCATTCCAAA 58.183 33.333 0.00 0.00 0.00 3.28
325 326 8.367660 ACTATGTTCTACTCTCTTCATTCCAA 57.632 34.615 0.00 0.00 0.00 3.53
326 327 7.962995 ACTATGTTCTACTCTCTTCATTCCA 57.037 36.000 0.00 0.00 0.00 3.53
327 328 9.660180 AAAACTATGTTCTACTCTCTTCATTCC 57.340 33.333 0.00 0.00 0.00 3.01
330 331 9.646427 GTCAAAACTATGTTCTACTCTCTTCAT 57.354 33.333 0.00 0.00 0.00 2.57
331 332 8.638873 TGTCAAAACTATGTTCTACTCTCTTCA 58.361 33.333 0.00 0.00 0.00 3.02
332 333 9.646427 ATGTCAAAACTATGTTCTACTCTCTTC 57.354 33.333 0.00 0.00 0.00 2.87
334 335 9.646427 GAATGTCAAAACTATGTTCTACTCTCT 57.354 33.333 0.00 0.00 0.00 3.10
335 336 9.424319 TGAATGTCAAAACTATGTTCTACTCTC 57.576 33.333 0.00 0.00 0.00 3.20
336 337 9.778741 TTGAATGTCAAAACTATGTTCTACTCT 57.221 29.630 0.00 0.00 32.71 3.24
341 342 9.736023 GAAGTTTGAATGTCAAAACTATGTTCT 57.264 29.630 5.04 0.00 46.53 3.01
342 343 9.515020 TGAAGTTTGAATGTCAAAACTATGTTC 57.485 29.630 5.04 3.78 46.53 3.18
344 345 9.683069 GATGAAGTTTGAATGTCAAAACTATGT 57.317 29.630 5.04 0.00 46.53 2.29
345 346 8.843733 CGATGAAGTTTGAATGTCAAAACTATG 58.156 33.333 5.04 0.00 46.53 2.23
346 347 8.023128 CCGATGAAGTTTGAATGTCAAAACTAT 58.977 33.333 5.04 0.00 46.53 2.12
347 348 7.012894 ACCGATGAAGTTTGAATGTCAAAACTA 59.987 33.333 5.04 0.00 46.53 2.24
348 349 6.183360 ACCGATGAAGTTTGAATGTCAAAACT 60.183 34.615 5.04 0.00 46.53 2.66
349 350 5.977129 ACCGATGAAGTTTGAATGTCAAAAC 59.023 36.000 5.04 0.00 46.53 2.43
350 351 6.142818 ACCGATGAAGTTTGAATGTCAAAA 57.857 33.333 5.04 0.00 46.53 2.44
355 356 4.641396 TCTGACCGATGAAGTTTGAATGT 58.359 39.130 0.00 0.00 0.00 2.71
370 371 1.533625 TTTGATTGCCCTTCTGACCG 58.466 50.000 0.00 0.00 0.00 4.79
400 401 3.557686 GCCAAGGTCATTTTGATTGCCTT 60.558 43.478 0.00 0.00 36.85 4.35
451 452 0.555769 GGCCCCCATGTATTTGAGGA 59.444 55.000 0.00 0.00 0.00 3.71
462 463 1.363530 CCACTTATGAGGGCCCCCAT 61.364 60.000 23.85 23.85 38.92 4.00
465 466 2.195956 GCCACTTATGAGGGCCCC 59.804 66.667 21.43 11.17 41.90 5.80
471 472 2.930040 CCTTACGTGTGCCACTTATGAG 59.070 50.000 0.00 0.00 31.34 2.90
473 474 2.695359 ACCTTACGTGTGCCACTTATG 58.305 47.619 0.00 2.32 31.34 1.90
481 482 1.504359 TGCTTGTACCTTACGTGTGC 58.496 50.000 0.00 0.00 0.00 4.57
484 485 5.106442 TGTCATATGCTTGTACCTTACGTG 58.894 41.667 0.00 0.00 0.00 4.49
487 488 7.464178 CGAAGTTGTCATATGCTTGTACCTTAC 60.464 40.741 0.00 0.00 0.00 2.34
517 518 9.925268 CGTGTCACTAAACTTACTGTTAAAAAT 57.075 29.630 0.65 0.00 38.03 1.82
523 524 5.068198 TCCTCGTGTCACTAAACTTACTGTT 59.932 40.000 0.65 0.00 41.29 3.16
526 527 5.475909 TCATCCTCGTGTCACTAAACTTACT 59.524 40.000 0.65 0.00 0.00 2.24
527 528 5.572126 GTCATCCTCGTGTCACTAAACTTAC 59.428 44.000 0.65 0.00 0.00 2.34
563 564 3.066064 CCCACGAAAGTTGTCATGTTTGA 59.934 43.478 0.00 0.00 46.40 2.69
597 598 6.757010 AGTGACATACGGCAAGTTTCTATTAG 59.243 38.462 0.00 0.00 0.00 1.73
601 602 4.021807 TCAGTGACATACGGCAAGTTTCTA 60.022 41.667 0.00 0.00 0.00 2.10
613 614 6.831769 ACGATGACAATTTTCAGTGACATAC 58.168 36.000 0.23 0.00 34.29 2.39
623 624 5.783654 CAGTCACGTAACGATGACAATTTTC 59.216 40.000 16.90 0.00 46.34 2.29
624 625 5.464057 TCAGTCACGTAACGATGACAATTTT 59.536 36.000 16.90 0.00 46.34 1.82
636 637 8.555166 TTTGATGAAAATTTCAGTCACGTAAC 57.445 30.769 14.10 0.00 43.98 2.50
684 685 4.502016 GATGAGTGTCACATGTGAGATGT 58.498 43.478 28.54 18.09 40.75 3.06
707 820 7.201652 GCAGGTCAGAGTTAAATCATCCTAAAC 60.202 40.741 5.62 0.72 0.00 2.01
726 839 4.577677 TGCGGCCTTTGCAGGTCA 62.578 61.111 0.00 0.00 46.59 4.02
1358 1482 3.948719 GGCAACCGGGACACAGGA 61.949 66.667 6.32 0.00 0.00 3.86
1455 1579 1.003812 CCAAACCCCACAGACGGAATA 59.996 52.381 0.00 0.00 0.00 1.75
1530 1659 3.041211 TCCACCTCCCACTGAGATATTG 58.959 50.000 0.00 0.00 44.42 1.90
1638 1767 2.725221 ACTCCATCCTGAAATCCTGC 57.275 50.000 0.00 0.00 0.00 4.85
1676 1805 5.656416 TCATTTTCTGTTTTGTGGACTTCCT 59.344 36.000 0.00 0.00 36.82 3.36
1677 1806 5.901552 TCATTTTCTGTTTTGTGGACTTCC 58.098 37.500 0.00 0.00 0.00 3.46
1901 2186 9.961265 CGGAGTAATAAACTGTGTGATAGATAA 57.039 33.333 0.00 0.00 39.07 1.75
1933 2218 6.873605 TGTCCTACATTTGTGAACAGAGTATG 59.126 38.462 0.00 0.00 0.00 2.39
2341 2626 2.185004 TGCTCCTTTTCGCTTTAGCT 57.815 45.000 0.00 0.00 39.32 3.32
2343 2628 2.098117 CCCATGCTCCTTTTCGCTTTAG 59.902 50.000 0.00 0.00 0.00 1.85
2345 2630 0.890683 CCCATGCTCCTTTTCGCTTT 59.109 50.000 0.00 0.00 0.00 3.51
2395 2681 1.532604 GGAAAGGGGGAAAACAGCGG 61.533 60.000 0.00 0.00 0.00 5.52
2399 2685 0.485543 GGAGGGAAAGGGGGAAAACA 59.514 55.000 0.00 0.00 0.00 2.83
2405 2691 0.032117 GGAAATGGAGGGAAAGGGGG 60.032 60.000 0.00 0.00 0.00 5.40
2448 2735 2.124819 AGAATGGCAGGAGCAGCG 60.125 61.111 0.00 0.00 44.61 5.18
2451 2738 2.683465 GGGGAGAATGGCAGGAGCA 61.683 63.158 0.00 0.00 44.61 4.26
2457 2744 1.699054 CGGATCTGGGGAGAATGGCA 61.699 60.000 0.00 0.00 0.00 4.92
2512 4172 1.280886 GCGATGCACTGCTCGATAGG 61.281 60.000 20.22 0.00 37.05 2.57
2514 4174 1.300156 GGCGATGCACTGCTCGATA 60.300 57.895 20.22 0.00 37.05 2.92
2551 4211 2.200955 GGATTTCTCCTCCCTCTTGGT 58.799 52.381 0.00 0.00 38.65 3.67
2573 4233 3.802418 AACGCCGACCACCTCACAC 62.802 63.158 0.00 0.00 0.00 3.82
2574 4234 3.542676 AACGCCGACCACCTCACA 61.543 61.111 0.00 0.00 0.00 3.58
2664 4326 0.396695 CTGCCCCCATCAAGAATGCT 60.397 55.000 0.00 0.00 33.71 3.79
2791 4468 1.804326 GCGTCGGCGTTGACATAGT 60.804 57.895 12.58 0.00 38.84 2.12
2793 4470 2.507547 GGCGTCGGCGTTGACATA 60.508 61.111 12.58 0.00 41.24 2.29
2815 4498 1.372997 GTTCGGCTTCAGTGCTCGA 60.373 57.895 0.00 0.00 35.24 4.04
2858 4560 3.390521 CTGTCGTAGGGCTGGCCA 61.391 66.667 23.25 4.71 37.98 5.36
2928 4641 1.404986 CGAACATAGCCAAAGTCCGGA 60.405 52.381 0.00 0.00 0.00 5.14
3009 4770 5.230306 CCAAACGCACAAAAATTCGAAGTTA 59.770 36.000 11.70 0.00 0.00 2.24
3162 4925 7.920738 GTGCTAACACTAATTCTTTCCATAGG 58.079 38.462 0.00 0.00 43.85 2.57
3188 4951 4.310357 ACAACGCGGGTTTCTTAAAATT 57.690 36.364 16.01 0.00 32.98 1.82
3224 4992 0.310543 TGTCGGCATGCTGTGTTTTC 59.689 50.000 25.42 10.85 0.00 2.29
3253 5021 4.455533 CCGACATCCTTCAAGAAATTGTCA 59.544 41.667 14.41 0.00 33.38 3.58
3351 5120 2.892852 TGCTCTTGAAAATGGGGAACAG 59.107 45.455 0.00 0.00 0.00 3.16
3380 5149 4.022068 GGTTCAGGATTTTGATCAGTTGCA 60.022 41.667 0.00 0.00 0.00 4.08
3480 5249 0.756903 GGTACTGGTGCCGGTCATAT 59.243 55.000 5.89 0.00 36.80 1.78
3481 5250 2.204748 GGTACTGGTGCCGGTCATA 58.795 57.895 5.89 0.00 36.80 2.15
3561 5330 0.176219 TCACACGAGACCCAAACGTT 59.824 50.000 0.00 0.00 38.18 3.99
3730 5499 9.635404 AGTTAGAGCTGAGACTTGTATTATACT 57.365 33.333 0.00 0.00 0.00 2.12
3770 5542 6.288941 TGGTGCTACTGCTAACACTAATTA 57.711 37.500 0.00 0.00 40.48 1.40
4013 5785 2.667536 AACTGGCAGCTGTCGCAG 60.668 61.111 15.89 9.05 39.10 5.18
4014 5786 2.974148 CAACTGGCAGCTGTCGCA 60.974 61.111 15.89 0.00 39.10 5.10
4137 5910 6.371825 AGCAAATTGTTAACCTCTGCTACTAC 59.628 38.462 15.74 0.00 36.92 2.73
4142 5915 4.144297 TCAGCAAATTGTTAACCTCTGCT 58.856 39.130 12.98 12.98 39.15 4.24
4155 5928 5.005586 CACGAAACACAAACATCAGCAAATT 59.994 36.000 0.00 0.00 0.00 1.82
4165 5938 2.160615 CAGGTCACACGAAACACAAACA 59.839 45.455 0.00 0.00 0.00 2.83
4193 5966 8.234887 TGCTAAATAATCGGATATAACACACG 57.765 34.615 0.00 0.00 0.00 4.49
4230 6003 8.345306 AGGAGTTATATATCCTTCCCTTACGAT 58.655 37.037 0.00 0.00 43.62 3.73
4380 8043 3.921021 CAGTAGTCTGTAAAGTCCTTGCG 59.079 47.826 0.00 0.00 36.97 4.85
4892 8745 9.388506 CAAAAGTAATCTGTATGAGATTCAGGT 57.611 33.333 5.35 0.00 46.84 4.00
4961 8814 0.393537 GCACTCCATGGAAGACTGGG 60.394 60.000 17.00 5.81 33.13 4.45
4970 8823 5.182570 CCATACATCATTAAGCACTCCATGG 59.817 44.000 4.97 4.97 0.00 3.66
5021 8874 2.028748 AGCTTGCCAAATTAACTGCAGG 60.029 45.455 19.93 0.00 34.81 4.85
5030 8883 8.197439 GGTAACATAGATTAAGCTTGCCAAATT 58.803 33.333 9.86 0.00 0.00 1.82
5053 8906 6.037062 CACAGCAATGAACATCTATTTCGGTA 59.963 38.462 0.00 0.00 0.00 4.02
5081 8934 3.374745 CAAACACTCACATGGCTTTCAC 58.625 45.455 0.00 0.00 0.00 3.18
5104 8957 7.837689 AGGTAAGTTGTATCCTACTGTACATCA 59.162 37.037 0.00 0.00 31.48 3.07
5299 9152 4.323417 AGAAAAGTGCCACACGAATCATA 58.677 39.130 0.00 0.00 39.64 2.15
5312 9165 1.200020 AGCCACGCAATAGAAAAGTGC 59.800 47.619 0.00 0.00 34.87 4.40
5367 9220 8.303156 CAATTGTTAATCCAAATACAGTGGTGA 58.697 33.333 0.00 0.00 37.43 4.02
5643 9496 9.910511 GCATTTTATATGCTGAAAACTGAAATG 57.089 29.630 0.50 0.00 41.52 2.32
5736 9589 3.399330 AGTCATTACACCCACAAAGACG 58.601 45.455 0.00 0.00 0.00 4.18
5746 9599 2.292292 ACAACGCCAAAGTCATTACACC 59.708 45.455 0.00 0.00 0.00 4.16
5763 9616 3.680196 GCCAGACCAAGAGGATAGACAAC 60.680 52.174 0.00 0.00 38.69 3.32
5846 9699 4.686091 GGCAAACAATTAAGTCCTCAAAGC 59.314 41.667 0.00 0.00 0.00 3.51
6071 9925 3.004734 AGTTACTGACAAGGCATTTGCAC 59.995 43.478 4.74 0.00 44.36 4.57
6122 9976 0.613260 ATGGACAGGTAGAAAGCGCA 59.387 50.000 11.47 0.00 0.00 6.09
6124 9978 2.972625 TGAATGGACAGGTAGAAAGCG 58.027 47.619 0.00 0.00 0.00 4.68
6318 10175 9.030452 TGCATATTCCACACTAAATAAAAGGTT 57.970 29.630 0.00 0.00 0.00 3.50
6319 10176 8.588290 TGCATATTCCACACTAAATAAAAGGT 57.412 30.769 0.00 0.00 0.00 3.50
6457 10315 1.862201 CCATATTTTAGGAACGCGCGA 59.138 47.619 39.36 11.25 0.00 5.87
6537 10402 7.397761 CCCCATGGTTCCTGTTATACTTTTAAA 59.602 37.037 11.73 0.00 0.00 1.52
6692 10558 0.883833 CTGCTTTGGATGGTGGTGTC 59.116 55.000 0.00 0.00 0.00 3.67
6772 10638 0.522626 CACTTGCGGCATGATTCACA 59.477 50.000 21.01 0.00 0.00 3.58
6829 10695 3.732849 CCTGGGGCCTGGAGGAAC 61.733 72.222 0.84 0.00 37.23 3.62
7218 11212 0.407139 ATTGGCCTGCTTTCCAGTCT 59.593 50.000 3.32 0.00 40.06 3.24
7222 11216 2.705127 AGAAAAATTGGCCTGCTTTCCA 59.295 40.909 3.32 0.00 0.00 3.53
7236 11230 7.117236 CACATGCTGCATAAGTTTCAGAAAAAT 59.883 33.333 15.78 0.00 0.00 1.82
7242 11236 4.409570 GTCACATGCTGCATAAGTTTCAG 58.590 43.478 15.78 2.79 0.00 3.02
7258 11252 1.366679 CAGCTTCTCATGCGTCACAT 58.633 50.000 0.00 0.00 40.66 3.21
7323 11878 3.373565 GCCTTCGGCCAACAAGGG 61.374 66.667 21.31 7.52 44.06 3.95
7334 11889 1.991264 CGATGATCATAGCAGCCTTCG 59.009 52.381 8.54 1.44 0.00 3.79
7336 11891 3.397482 GTTCGATGATCATAGCAGCCTT 58.603 45.455 8.54 0.00 0.00 4.35
7346 11901 4.398358 AGTTCTACTTCGGTTCGATGATCA 59.602 41.667 0.00 0.00 35.23 2.92
7349 11904 3.754850 TCAGTTCTACTTCGGTTCGATGA 59.245 43.478 9.57 0.00 35.23 2.92
7350 11905 4.092771 TCAGTTCTACTTCGGTTCGATG 57.907 45.455 0.00 2.41 35.23 3.84
7351 11906 3.427773 GCTCAGTTCTACTTCGGTTCGAT 60.428 47.826 0.00 0.00 35.23 3.59
7352 11907 2.095364 GCTCAGTTCTACTTCGGTTCGA 60.095 50.000 0.00 0.00 0.00 3.71
7353 11908 2.095161 AGCTCAGTTCTACTTCGGTTCG 60.095 50.000 0.00 0.00 0.00 3.95
7354 11909 3.057456 TGAGCTCAGTTCTACTTCGGTTC 60.057 47.826 13.74 0.00 0.00 3.62
7355 11910 2.891580 TGAGCTCAGTTCTACTTCGGTT 59.108 45.455 13.74 0.00 0.00 4.44
7356 11911 2.515854 TGAGCTCAGTTCTACTTCGGT 58.484 47.619 13.74 0.00 0.00 4.69
7358 11913 4.201666 GCATTTGAGCTCAGTTCTACTTCG 60.202 45.833 17.43 0.00 0.00 3.79
7359 11914 4.201666 CGCATTTGAGCTCAGTTCTACTTC 60.202 45.833 17.43 0.36 0.00 3.01
7360 11915 3.681897 CGCATTTGAGCTCAGTTCTACTT 59.318 43.478 17.43 0.00 0.00 2.24
7362 11917 3.254060 TCGCATTTGAGCTCAGTTCTAC 58.746 45.455 17.43 5.11 0.00 2.59
7363 11918 3.515630 CTCGCATTTGAGCTCAGTTCTA 58.484 45.455 17.43 0.00 0.00 2.10
7373 11928 3.247173 GTCCTCTTATGCTCGCATTTGAG 59.753 47.826 9.94 15.43 37.82 3.02
7374 11929 3.118629 AGTCCTCTTATGCTCGCATTTGA 60.119 43.478 9.94 7.78 37.82 2.69
7377 11932 2.831333 CAGTCCTCTTATGCTCGCATT 58.169 47.619 9.94 0.00 37.82 3.56
7379 11934 0.179100 GCAGTCCTCTTATGCTCGCA 60.179 55.000 0.00 0.00 37.00 5.10
7381 11936 0.749649 AGGCAGTCCTCTTATGCTCG 59.250 55.000 0.00 0.00 38.72 5.03
7392 11947 0.670854 GACGTCCTTTGAGGCAGTCC 60.671 60.000 3.51 0.00 36.32 3.85
7393 11948 0.318762 AGACGTCCTTTGAGGCAGTC 59.681 55.000 13.01 11.23 39.82 3.51
7394 11949 0.759346 AAGACGTCCTTTGAGGCAGT 59.241 50.000 13.01 0.00 34.61 4.40
7396 11951 1.946768 CAAAAGACGTCCTTTGAGGCA 59.053 47.619 27.93 0.00 43.90 4.75
7401 11956 4.349663 TGTTCACAAAAGACGTCCTTTG 57.650 40.909 29.31 29.31 43.90 2.77
7402 11957 6.668323 CATATGTTCACAAAAGACGTCCTTT 58.332 36.000 13.01 9.38 46.47 3.11
7403 11958 5.334879 GCATATGTTCACAAAAGACGTCCTT 60.335 40.000 13.01 1.87 36.47 3.36
7405 11960 4.083537 TGCATATGTTCACAAAAGACGTCC 60.084 41.667 13.01 0.00 0.00 4.79
7406 11961 5.029650 TGCATATGTTCACAAAAGACGTC 57.970 39.130 7.70 7.70 0.00 4.34
7407 11962 5.412594 AGATGCATATGTTCACAAAAGACGT 59.587 36.000 0.00 0.00 0.00 4.34
7408 11963 5.872635 AGATGCATATGTTCACAAAAGACG 58.127 37.500 0.00 0.00 0.00 4.18
7414 11969 9.399797 AGAATAAGAAGATGCATATGTTCACAA 57.600 29.630 14.94 4.17 38.63 3.33
7415 11970 8.833493 CAGAATAAGAAGATGCATATGTTCACA 58.167 33.333 14.94 0.00 38.63 3.58
7429 11984 9.216117 GGCTGTAAAAACTACAGAATAAGAAGA 57.784 33.333 14.55 0.00 45.69 2.87
7430 11985 8.999431 TGGCTGTAAAAACTACAGAATAAGAAG 58.001 33.333 14.55 0.00 45.69 2.85
7434 11989 8.946085 CATCTGGCTGTAAAAACTACAGAATAA 58.054 33.333 14.55 0.00 45.69 1.40
7435 11990 8.318412 TCATCTGGCTGTAAAAACTACAGAATA 58.682 33.333 14.55 1.18 45.69 1.75
7436 11991 7.168219 TCATCTGGCTGTAAAAACTACAGAAT 58.832 34.615 14.55 1.55 45.69 2.40
7437 11992 6.530120 TCATCTGGCTGTAAAAACTACAGAA 58.470 36.000 14.55 2.84 45.69 3.02
7439 11994 5.352569 CCTCATCTGGCTGTAAAAACTACAG 59.647 44.000 7.42 7.42 45.62 2.74
7454 12009 5.593679 ATTTTTCTCATTGCCTCATCTGG 57.406 39.130 0.00 0.00 0.00 3.86
7455 12010 9.245962 GAATAATTTTTCTCATTGCCTCATCTG 57.754 33.333 1.79 0.00 0.00 2.90
7456 12011 8.419442 GGAATAATTTTTCTCATTGCCTCATCT 58.581 33.333 8.29 0.00 0.00 2.90
7457 12012 8.199449 TGGAATAATTTTTCTCATTGCCTCATC 58.801 33.333 8.29 0.00 0.00 2.92
7458 12013 8.081517 TGGAATAATTTTTCTCATTGCCTCAT 57.918 30.769 8.29 0.00 0.00 2.90
7459 12014 7.479352 TGGAATAATTTTTCTCATTGCCTCA 57.521 32.000 8.29 0.00 0.00 3.86
7460 12015 7.010830 GCTTGGAATAATTTTTCTCATTGCCTC 59.989 37.037 8.29 0.00 0.00 4.70
7461 12016 6.820152 GCTTGGAATAATTTTTCTCATTGCCT 59.180 34.615 8.29 0.00 0.00 4.75
7462 12017 6.037500 GGCTTGGAATAATTTTTCTCATTGCC 59.962 38.462 17.10 17.10 0.00 4.52
7463 12018 6.037500 GGGCTTGGAATAATTTTTCTCATTGC 59.962 38.462 8.29 10.47 0.00 3.56
7464 12019 7.333323 AGGGCTTGGAATAATTTTTCTCATTG 58.667 34.615 8.29 3.85 0.00 2.82
7465 12020 7.180766 TGAGGGCTTGGAATAATTTTTCTCATT 59.819 33.333 8.29 0.00 0.00 2.57
7466 12021 6.669154 TGAGGGCTTGGAATAATTTTTCTCAT 59.331 34.615 8.29 0.00 0.00 2.90
7467 12022 6.015918 TGAGGGCTTGGAATAATTTTTCTCA 58.984 36.000 8.29 3.12 0.00 3.27
7468 12023 6.333416 GTGAGGGCTTGGAATAATTTTTCTC 58.667 40.000 8.29 0.91 0.00 2.87
7469 12024 5.187772 GGTGAGGGCTTGGAATAATTTTTCT 59.812 40.000 8.29 0.00 0.00 2.52
7470 12025 5.419542 GGTGAGGGCTTGGAATAATTTTTC 58.580 41.667 0.40 0.40 0.00 2.29
7471 12026 4.081697 CGGTGAGGGCTTGGAATAATTTTT 60.082 41.667 0.00 0.00 0.00 1.94
7472 12027 3.447229 CGGTGAGGGCTTGGAATAATTTT 59.553 43.478 0.00 0.00 0.00 1.82
7473 12028 3.023832 CGGTGAGGGCTTGGAATAATTT 58.976 45.455 0.00 0.00 0.00 1.82
7474 12029 2.654863 CGGTGAGGGCTTGGAATAATT 58.345 47.619 0.00 0.00 0.00 1.40
7475 12030 1.133792 CCGGTGAGGGCTTGGAATAAT 60.134 52.381 0.00 0.00 35.97 1.28
7476 12031 0.254747 CCGGTGAGGGCTTGGAATAA 59.745 55.000 0.00 0.00 35.97 1.40
7477 12032 1.912220 CCGGTGAGGGCTTGGAATA 59.088 57.895 0.00 0.00 35.97 1.75
7478 12033 2.677228 CCGGTGAGGGCTTGGAAT 59.323 61.111 0.00 0.00 35.97 3.01
7486 12041 1.523032 GTAAATCCGCCGGTGAGGG 60.523 63.158 18.79 6.61 41.48 4.30
7487 12042 1.881252 CGTAAATCCGCCGGTGAGG 60.881 63.158 18.79 11.64 44.97 3.86
7488 12043 3.700961 CGTAAATCCGCCGGTGAG 58.299 61.111 18.79 6.88 0.00 3.51
7496 12051 1.006832 CCTGTCCTTGCGTAAATCCG 58.993 55.000 0.00 0.00 0.00 4.18
7497 12052 2.109425 ACCTGTCCTTGCGTAAATCC 57.891 50.000 0.00 0.00 0.00 3.01
7498 12053 2.608090 GCTACCTGTCCTTGCGTAAATC 59.392 50.000 0.00 0.00 0.00 2.17
7499 12054 2.629051 GCTACCTGTCCTTGCGTAAAT 58.371 47.619 0.00 0.00 0.00 1.40
7500 12055 1.670674 CGCTACCTGTCCTTGCGTAAA 60.671 52.381 0.00 0.00 41.45 2.01
7501 12056 0.108992 CGCTACCTGTCCTTGCGTAA 60.109 55.000 0.00 0.00 41.45 3.18
7502 12057 1.509463 CGCTACCTGTCCTTGCGTA 59.491 57.895 0.00 0.00 41.45 4.42
7503 12058 2.261671 CGCTACCTGTCCTTGCGT 59.738 61.111 0.00 0.00 41.45 5.24
7504 12059 2.509336 CCGCTACCTGTCCTTGCG 60.509 66.667 0.00 0.00 45.22 4.85
7505 12060 1.448013 GTCCGCTACCTGTCCTTGC 60.448 63.158 0.00 0.00 0.00 4.01
7506 12061 0.608640 AAGTCCGCTACCTGTCCTTG 59.391 55.000 0.00 0.00 0.00 3.61
7507 12062 1.002087 CAAAGTCCGCTACCTGTCCTT 59.998 52.381 0.00 0.00 0.00 3.36
7508 12063 0.608640 CAAAGTCCGCTACCTGTCCT 59.391 55.000 0.00 0.00 0.00 3.85
7509 12064 0.320697 ACAAAGTCCGCTACCTGTCC 59.679 55.000 0.00 0.00 0.00 4.02
7510 12065 2.165319 AACAAAGTCCGCTACCTGTC 57.835 50.000 0.00 0.00 0.00 3.51
7511 12066 2.632987 AAACAAAGTCCGCTACCTGT 57.367 45.000 0.00 0.00 0.00 4.00
7512 12067 3.120304 GCTAAAACAAAGTCCGCTACCTG 60.120 47.826 0.00 0.00 0.00 4.00
7513 12068 3.072211 GCTAAAACAAAGTCCGCTACCT 58.928 45.455 0.00 0.00 0.00 3.08
7514 12069 2.809696 TGCTAAAACAAAGTCCGCTACC 59.190 45.455 0.00 0.00 0.00 3.18
7515 12070 3.497262 ACTGCTAAAACAAAGTCCGCTAC 59.503 43.478 0.00 0.00 0.00 3.58
7516 12071 3.496884 CACTGCTAAAACAAAGTCCGCTA 59.503 43.478 0.00 0.00 0.00 4.26
7517 12072 2.290641 CACTGCTAAAACAAAGTCCGCT 59.709 45.455 0.00 0.00 0.00 5.52
7518 12073 2.289547 TCACTGCTAAAACAAAGTCCGC 59.710 45.455 0.00 0.00 0.00 5.54
7519 12074 4.545823 TTCACTGCTAAAACAAAGTCCG 57.454 40.909 0.00 0.00 0.00 4.79
7520 12075 6.966021 TGTATTCACTGCTAAAACAAAGTCC 58.034 36.000 0.00 0.00 0.00 3.85
7521 12076 6.578919 GCTGTATTCACTGCTAAAACAAAGTC 59.421 38.462 0.07 0.00 43.97 3.01
7522 12077 6.039270 TGCTGTATTCACTGCTAAAACAAAGT 59.961 34.615 7.91 0.00 46.56 2.66
7523 12078 6.437928 TGCTGTATTCACTGCTAAAACAAAG 58.562 36.000 7.91 0.00 46.56 2.77
7524 12079 6.384258 TGCTGTATTCACTGCTAAAACAAA 57.616 33.333 7.91 0.00 46.56 2.83
7525 12080 6.205784 GTTGCTGTATTCACTGCTAAAACAA 58.794 36.000 7.91 0.00 46.56 2.83
7526 12081 5.278266 GGTTGCTGTATTCACTGCTAAAACA 60.278 40.000 7.91 0.00 46.56 2.83
7527 12082 5.154222 GGTTGCTGTATTCACTGCTAAAAC 58.846 41.667 7.91 4.68 46.56 2.43
7528 12083 4.824537 TGGTTGCTGTATTCACTGCTAAAA 59.175 37.500 7.91 0.00 46.56 1.52
7535 12090 4.910195 TCATCTTGGTTGCTGTATTCACT 58.090 39.130 0.00 0.00 0.00 3.41
7576 12131 6.263392 TGGTTTCAGACGATTGGTATTTCAAA 59.737 34.615 0.00 0.00 0.00 2.69
7578 12133 5.309638 TGGTTTCAGACGATTGGTATTTCA 58.690 37.500 0.00 0.00 0.00 2.69
7579 12134 5.873179 TGGTTTCAGACGATTGGTATTTC 57.127 39.130 0.00 0.00 0.00 2.17
7582 12137 3.689649 GCTTGGTTTCAGACGATTGGTAT 59.310 43.478 0.00 0.00 0.00 2.73
7583 12138 3.071479 GCTTGGTTTCAGACGATTGGTA 58.929 45.455 0.00 0.00 0.00 3.25
7584 12139 1.880027 GCTTGGTTTCAGACGATTGGT 59.120 47.619 0.00 0.00 0.00 3.67
7585 12140 1.200020 GGCTTGGTTTCAGACGATTGG 59.800 52.381 0.00 0.00 0.00 3.16
7586 12141 2.154462 AGGCTTGGTTTCAGACGATTG 58.846 47.619 0.00 0.00 0.00 2.67
7609 12417 8.997621 AACAGACGAGTAGAAATAATAAGCAA 57.002 30.769 0.00 0.00 0.00 3.91
7617 12425 5.359009 CCCCTGTAACAGACGAGTAGAAATA 59.641 44.000 0.00 0.00 32.44 1.40
7650 12458 4.387862 CCATGCTTCTCTTTTTGCATTCAC 59.612 41.667 0.00 0.00 43.24 3.18
7652 12460 3.370061 GCCATGCTTCTCTTTTTGCATTC 59.630 43.478 0.00 0.00 43.24 2.67
7671 12479 1.615116 CCTCCATCAGCTTTCTTGCCA 60.615 52.381 0.00 0.00 0.00 4.92
7708 12516 3.837731 AGAGGAAGAGAGGAAGGTGAAAG 59.162 47.826 0.00 0.00 0.00 2.62
7710 12518 3.076785 AGAGAGGAAGAGAGGAAGGTGAA 59.923 47.826 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.