Multiple sequence alignment - TraesCS3A01G360800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G360800 chr3A 100.000 6431 0 0 1 6431 608385497 608379067 0.000000e+00 11876.0
1 TraesCS3A01G360800 chr3A 95.472 795 33 3 1 794 682012516 682011724 0.000000e+00 1266.0
2 TraesCS3A01G360800 chr3A 81.349 504 66 16 1200 1693 587593094 587592609 1.010000e-102 385.0
3 TraesCS3A01G360800 chr3A 82.692 312 44 6 1384 1691 120808735 120808430 1.060000e-67 268.0
4 TraesCS3A01G360800 chr3B 92.924 4084 195 39 2011 6045 618682610 618678572 0.000000e+00 5854.0
5 TraesCS3A01G360800 chr3B 92.259 788 38 15 1161 1932 618683389 618682609 0.000000e+00 1096.0
6 TraesCS3A01G360800 chr3B 90.933 375 18 11 822 1188 618683777 618683411 2.080000e-134 490.0
7 TraesCS3A01G360800 chr3B 93.902 82 4 1 1935 2015 9414255 9414174 8.760000e-24 122.0
8 TraesCS3A01G360800 chr3D 96.639 3005 62 7 2487 5478 465076635 465073657 0.000000e+00 4953.0
9 TraesCS3A01G360800 chr3D 89.175 1164 53 40 822 1932 465078221 465077078 0.000000e+00 1384.0
10 TraesCS3A01G360800 chr3D 94.432 449 22 2 2008 2456 465077082 465076637 0.000000e+00 688.0
11 TraesCS3A01G360800 chr3D 85.761 618 62 15 5477 6092 465073622 465073029 1.180000e-176 630.0
12 TraesCS3A01G360800 chr4A 95.844 794 32 1 1 794 155828783 155827991 0.000000e+00 1282.0
13 TraesCS3A01G360800 chr4A 81.151 504 67 20 1200 1693 176879596 176879111 4.710000e-101 379.0
14 TraesCS3A01G360800 chr5A 95.844 794 18 7 1 794 382266946 382267724 0.000000e+00 1269.0
15 TraesCS3A01G360800 chr1D 82.798 779 128 5 3597 4372 381012857 381013632 0.000000e+00 691.0
16 TraesCS3A01G360800 chr1D 77.059 170 25 8 416 571 5247393 5247562 1.150000e-12 86.1
17 TraesCS3A01G360800 chr5D 85.572 402 52 4 1298 1695 169461138 169461537 3.590000e-112 416.0
18 TraesCS3A01G360800 chr5D 94.231 104 6 0 1698 1801 169462025 169462128 6.670000e-35 159.0
19 TraesCS3A01G360800 chr6A 86.313 358 43 4 1342 1695 428673265 428672910 1.010000e-102 385.0
20 TraesCS3A01G360800 chr6A 80.000 90 13 3 362 449 196184850 196184936 1.940000e-05 62.1
21 TraesCS3A01G360800 chr6B 82.173 359 52 6 1342 1693 11250252 11250605 1.360000e-76 298.0
22 TraesCS3A01G360800 chr6B 93.478 46 1 1 1824 1869 585912971 585912928 4.160000e-07 67.6
23 TraesCS3A01G360800 chr7A 83.871 310 42 7 1384 1691 226569683 226569986 8.160000e-74 289.0
24 TraesCS3A01G360800 chr7A 83.013 312 43 6 1384 1691 26673074 26673379 2.280000e-69 274.0
25 TraesCS3A01G360800 chr2D 85.199 277 35 5 362 634 628826797 628826523 4.910000e-71 279.0
26 TraesCS3A01G360800 chr5B 83.226 310 42 7 1384 1691 103478567 103478868 6.350000e-70 276.0
27 TraesCS3A01G360800 chr5B 98.630 73 1 0 1933 2005 22532657 22532729 5.230000e-26 130.0
28 TraesCS3A01G360800 chr5B 94.118 85 3 1 1935 2019 711237952 711237870 1.880000e-25 128.0
29 TraesCS3A01G360800 chr5B 79.641 167 24 7 1218 1383 536579498 536579655 1.900000e-20 111.0
30 TraesCS3A01G360800 chr1B 81.879 298 42 6 1198 1491 39306404 39306115 2.320000e-59 241.0
31 TraesCS3A01G360800 chr2B 98.649 74 1 0 1935 2008 1835573 1835646 1.450000e-26 132.0
32 TraesCS3A01G360800 chr2B 100.000 71 0 0 1935 2005 335527193 335527263 1.450000e-26 132.0
33 TraesCS3A01G360800 chr2B 98.649 74 1 0 1933 2006 669186922 669186849 1.450000e-26 132.0
34 TraesCS3A01G360800 chr2B 98.630 73 1 0 1933 2005 4647280 4647208 5.230000e-26 130.0
35 TraesCS3A01G360800 chr2B 76.142 197 42 5 402 595 31416718 31416912 1.480000e-16 99.0
36 TraesCS3A01G360800 chr4D 97.333 75 2 0 1935 2009 449455686 449455612 1.880000e-25 128.0
37 TraesCS3A01G360800 chr4B 92.941 85 2 4 1935 2018 659523162 659523243 3.150000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G360800 chr3A 608379067 608385497 6430 True 11876.00 11876 100.000000 1 6431 1 chr3A.!!$R3 6430
1 TraesCS3A01G360800 chr3A 682011724 682012516 792 True 1266.00 1266 95.472000 1 794 1 chr3A.!!$R4 793
2 TraesCS3A01G360800 chr3B 618678572 618683777 5205 True 2480.00 5854 92.038667 822 6045 3 chr3B.!!$R2 5223
3 TraesCS3A01G360800 chr3D 465073029 465078221 5192 True 1913.75 4953 91.501750 822 6092 4 chr3D.!!$R1 5270
4 TraesCS3A01G360800 chr4A 155827991 155828783 792 True 1282.00 1282 95.844000 1 794 1 chr4A.!!$R1 793
5 TraesCS3A01G360800 chr5A 382266946 382267724 778 False 1269.00 1269 95.844000 1 794 1 chr5A.!!$F1 793
6 TraesCS3A01G360800 chr1D 381012857 381013632 775 False 691.00 691 82.798000 3597 4372 1 chr1D.!!$F2 775
7 TraesCS3A01G360800 chr5D 169461138 169462128 990 False 287.50 416 89.901500 1298 1801 2 chr5D.!!$F1 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
957 975 0.236711 TCAAACCGTCGTCTCGTCTC 59.763 55.000 0.0 0.0 0.00 3.36 F
2006 2604 0.481567 TATGGGACGGAGGGAGTAGG 59.518 60.000 0.0 0.0 0.00 3.18 F
2009 2607 0.776176 GGGACGGAGGGAGTAGGATA 59.224 60.000 0.0 0.0 0.00 2.59 F
2010 2608 1.358445 GGGACGGAGGGAGTAGGATAT 59.642 57.143 0.0 0.0 0.00 1.63 F
2214 2813 1.945394 GCACTATGCAGATGAACCCAG 59.055 52.381 0.0 0.0 44.26 4.45 F
3858 4482 0.618680 TGGACCATCCAGGGTGAGAG 60.619 60.000 0.0 0.0 42.67 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2758 3359 0.386476 CGCATGGTAGCAATGCCATT 59.614 50.000 17.67 0.0 46.21 3.16 R
3068 3676 3.658757 TTATGCTGGTTTTGCTTGGTC 57.341 42.857 0.00 0.0 0.00 4.02 R
3158 3766 6.000891 TCGAAAGAATCAACACTTCCAATG 57.999 37.500 0.00 0.0 37.03 2.82 R
3600 4224 7.040409 ACAACCAGCTACATCCTTAAAGAAAAG 60.040 37.037 0.00 0.0 0.00 2.27 R
4043 4667 3.370953 GGATGTCAGGTCTATTTGTGCCT 60.371 47.826 0.00 0.0 0.00 4.75 R
5488 6157 0.860533 CTTTTGTGGTGCCAATTGCG 59.139 50.000 0.00 0.0 45.60 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 127 1.010350 GCAATTGATCAGCGCCTCG 60.010 57.895 10.34 0.00 0.00 4.63
127 129 1.091771 CAATTGATCAGCGCCTCGGT 61.092 55.000 2.29 0.00 38.40 4.69
197 199 1.146930 ATTGGAGCATCGTCGGCAT 59.853 52.632 0.00 0.00 34.37 4.40
260 262 4.742201 GCACTGGAGCTTCGCCGA 62.742 66.667 0.00 0.00 0.00 5.54
277 279 3.047718 GATGCCGAGACGACGACCA 62.048 63.158 0.00 0.00 35.09 4.02
434 436 1.021390 CAATGAAGCTTCGCCGGAGT 61.021 55.000 21.11 0.00 0.00 3.85
437 439 1.079750 GAAGCTTCGCCGGAGTTCT 60.080 57.895 11.40 0.00 0.00 3.01
475 477 0.516877 CGTCAATGAAGCTTCGCCAA 59.483 50.000 21.11 4.27 0.00 4.52
539 541 3.220222 CTATGGAGCAGCACCCGA 58.780 61.111 6.39 0.00 0.00 5.14
717 733 6.723052 TGCTCTGTATCAGAATCAGATGGATA 59.277 38.462 7.93 0.00 40.18 2.59
788 804 1.141019 GTGCAGGATCGAACGGCTA 59.859 57.895 14.45 2.01 0.00 3.93
794 810 1.734137 GATCGAACGGCTAGCTGGA 59.266 57.895 26.90 15.09 0.00 3.86
795 811 0.595310 GATCGAACGGCTAGCTGGAC 60.595 60.000 26.90 18.00 0.00 4.02
796 812 1.320344 ATCGAACGGCTAGCTGGACA 61.320 55.000 26.90 8.68 0.00 4.02
797 813 1.141881 CGAACGGCTAGCTGGACAT 59.858 57.895 26.90 10.47 0.00 3.06
798 814 0.872021 CGAACGGCTAGCTGGACATC 60.872 60.000 26.90 17.00 0.00 3.06
799 815 0.530870 GAACGGCTAGCTGGACATCC 60.531 60.000 26.90 6.01 0.00 3.51
800 816 2.028190 CGGCTAGCTGGACATCCG 59.972 66.667 16.30 1.17 39.43 4.18
801 817 2.280457 GGCTAGCTGGACATCCGC 60.280 66.667 15.72 6.63 39.43 5.54
802 818 2.280457 GCTAGCTGGACATCCGCC 60.280 66.667 7.70 0.00 39.43 6.13
803 819 2.801631 GCTAGCTGGACATCCGCCT 61.802 63.158 7.70 3.95 39.43 5.52
804 820 1.068753 CTAGCTGGACATCCGCCTG 59.931 63.158 0.00 0.00 39.43 4.85
805 821 1.381191 TAGCTGGACATCCGCCTGA 60.381 57.895 0.00 0.00 39.43 3.86
806 822 0.760567 TAGCTGGACATCCGCCTGAT 60.761 55.000 0.00 0.00 39.43 2.90
807 823 1.153086 GCTGGACATCCGCCTGATT 60.153 57.895 4.11 0.00 39.43 2.57
808 824 0.749454 GCTGGACATCCGCCTGATTT 60.749 55.000 4.11 0.00 39.43 2.17
809 825 1.019673 CTGGACATCCGCCTGATTTG 58.980 55.000 0.00 0.00 39.43 2.32
810 826 0.327924 TGGACATCCGCCTGATTTGT 59.672 50.000 0.00 0.00 39.43 2.83
811 827 1.557371 TGGACATCCGCCTGATTTGTA 59.443 47.619 0.00 0.00 39.43 2.41
812 828 2.213499 GGACATCCGCCTGATTTGTAG 58.787 52.381 0.00 0.00 0.00 2.74
813 829 1.599542 GACATCCGCCTGATTTGTAGC 59.400 52.381 0.00 0.00 0.00 3.58
814 830 1.065491 ACATCCGCCTGATTTGTAGCA 60.065 47.619 0.00 0.00 0.00 3.49
815 831 1.600957 CATCCGCCTGATTTGTAGCAG 59.399 52.381 0.00 0.00 37.53 4.24
820 836 1.723870 CTGATTTGTAGCAGGCGCC 59.276 57.895 21.89 21.89 39.83 6.53
821 837 1.002746 TGATTTGTAGCAGGCGCCA 60.003 52.632 31.54 4.11 39.83 5.69
822 838 0.607762 TGATTTGTAGCAGGCGCCAA 60.608 50.000 31.54 12.90 39.83 4.52
823 839 0.525761 GATTTGTAGCAGGCGCCAAA 59.474 50.000 31.54 19.36 39.83 3.28
824 840 0.527565 ATTTGTAGCAGGCGCCAAAG 59.472 50.000 31.54 19.14 39.83 2.77
825 841 0.536233 TTTGTAGCAGGCGCCAAAGA 60.536 50.000 31.54 8.29 39.83 2.52
826 842 0.955428 TTGTAGCAGGCGCCAAAGAG 60.955 55.000 31.54 13.68 39.83 2.85
827 843 1.376037 GTAGCAGGCGCCAAAGAGT 60.376 57.895 31.54 2.66 39.83 3.24
832 848 0.521735 CAGGCGCCAAAGAGTAAACC 59.478 55.000 31.54 0.00 0.00 3.27
840 856 4.753107 CGCCAAAGAGTAAACCAGAACTAA 59.247 41.667 0.00 0.00 0.00 2.24
851 867 8.973182 AGTAAACCAGAACTAAAATCCAAAACA 58.027 29.630 0.00 0.00 0.00 2.83
864 880 3.254892 TCCAAAACAAAAACGCTCAACC 58.745 40.909 0.00 0.00 0.00 3.77
899 917 2.047560 GTGTACACCTGGCCCGAC 60.048 66.667 15.42 0.00 0.00 4.79
901 919 4.446413 GTACACCTGGCCCGACCG 62.446 72.222 0.00 0.00 43.94 4.79
911 929 3.411351 CCCGACCGCAAACACGAG 61.411 66.667 0.00 0.00 34.06 4.18
912 930 2.355363 CCGACCGCAAACACGAGA 60.355 61.111 0.00 0.00 34.06 4.04
913 931 2.654912 CCGACCGCAAACACGAGAC 61.655 63.158 0.00 0.00 34.06 3.36
957 975 0.236711 TCAAACCGTCGTCTCGTCTC 59.763 55.000 0.00 0.00 0.00 3.36
958 976 1.058590 CAAACCGTCGTCTCGTCTCG 61.059 60.000 0.00 0.00 0.00 4.04
959 977 1.502163 AAACCGTCGTCTCGTCTCGT 61.502 55.000 0.00 0.00 0.00 4.18
960 978 1.895280 AACCGTCGTCTCGTCTCGTC 61.895 60.000 0.00 0.00 0.00 4.20
961 979 2.093473 CCGTCGTCTCGTCTCGTCT 61.093 63.158 0.00 0.00 0.00 4.18
978 996 2.599281 TCGCCACTCCGTCCTTCA 60.599 61.111 0.00 0.00 0.00 3.02
980 998 2.741092 GCCACTCCGTCCTTCACA 59.259 61.111 0.00 0.00 0.00 3.58
1036 1062 3.841255 AGGAGAAAAGAGGAAGAATCGGT 59.159 43.478 0.00 0.00 0.00 4.69
1040 1066 4.461781 AGAAAAGAGGAAGAATCGGTCGTA 59.538 41.667 0.00 0.00 0.00 3.43
1229 1305 1.082169 CACGGTGTGCAATGTTCGG 60.082 57.895 0.00 0.00 0.00 4.30
1230 1306 1.525077 ACGGTGTGCAATGTTCGGT 60.525 52.632 0.00 0.00 0.00 4.69
1232 1308 1.579429 GGTGTGCAATGTTCGGTCC 59.421 57.895 0.00 0.00 0.00 4.46
1493 1569 6.566753 CGAAAAAGAGTAAGCTTTCTTCCCTG 60.567 42.308 12.65 2.65 37.12 4.45
1521 1604 2.552315 TGTTCCTTTGATCCGCTTTGTC 59.448 45.455 0.00 0.00 0.00 3.18
1543 1626 1.226491 GGCTGTGTTGATGATGCGC 60.226 57.895 0.00 0.00 0.00 6.09
1639 1736 8.499162 CGAAGAGTATGTTTTGATTCTGAGTTT 58.501 33.333 0.00 0.00 0.00 2.66
1645 1742 7.647907 ATGTTTTGATTCTGAGTTTGCATTC 57.352 32.000 0.00 0.00 0.00 2.67
1658 1756 4.630940 AGTTTGCATTCCACAGTGTTTTTG 59.369 37.500 0.00 0.00 0.00 2.44
1733 2321 6.884280 ATACATAGCCTTGTTATTGCCTTC 57.116 37.500 0.00 0.00 0.00 3.46
1753 2344 6.687647 GCCTTCTGCTTCTCCTAATAGAATGT 60.688 42.308 0.00 0.00 35.04 2.71
1819 2412 5.125100 TGCAAGACAAATCCAGTTTCATC 57.875 39.130 0.00 0.00 0.00 2.92
1820 2413 4.583907 TGCAAGACAAATCCAGTTTCATCA 59.416 37.500 0.00 0.00 0.00 3.07
1821 2414 5.244402 TGCAAGACAAATCCAGTTTCATCAT 59.756 36.000 0.00 0.00 0.00 2.45
1908 2506 1.396653 CTTGGATCCCATGTCTTGCC 58.603 55.000 9.90 0.00 31.53 4.52
1932 2530 5.501156 CTTTTGGGCAGAGGGGATATATAC 58.499 45.833 0.00 0.00 0.00 1.47
1933 2531 4.435977 TTGGGCAGAGGGGATATATACT 57.564 45.455 0.00 0.00 0.00 2.12
1934 2532 3.995636 TGGGCAGAGGGGATATATACTC 58.004 50.000 0.00 0.00 0.00 2.59
1935 2533 3.339742 TGGGCAGAGGGGATATATACTCA 59.660 47.826 0.00 0.00 32.52 3.41
1936 2534 4.015258 TGGGCAGAGGGGATATATACTCAT 60.015 45.833 0.00 0.00 32.52 2.90
1937 2535 5.197806 TGGGCAGAGGGGATATATACTCATA 59.802 44.000 0.00 0.00 32.52 2.15
1938 2536 6.143915 GGGCAGAGGGGATATATACTCATAA 58.856 44.000 0.00 0.00 32.52 1.90
1939 2537 6.789959 GGGCAGAGGGGATATATACTCATAAT 59.210 42.308 0.00 0.00 32.52 1.28
1940 2538 7.256475 GGGCAGAGGGGATATATACTCATAATG 60.256 44.444 0.00 0.00 32.52 1.90
1941 2539 7.291182 GGCAGAGGGGATATATACTCATAATGT 59.709 40.741 0.00 0.00 32.52 2.71
1942 2540 9.368416 GCAGAGGGGATATATACTCATAATGTA 57.632 37.037 0.00 0.00 32.52 2.29
1997 2595 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
1998 2596 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
1999 2597 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
2000 2598 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2001 2599 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2002 2600 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
2003 2601 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
2004 2602 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
2005 2603 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
2006 2604 0.481567 TATGGGACGGAGGGAGTAGG 59.518 60.000 0.00 0.00 0.00 3.18
2007 2605 1.294426 ATGGGACGGAGGGAGTAGGA 61.294 60.000 0.00 0.00 0.00 2.94
2008 2606 1.294426 TGGGACGGAGGGAGTAGGAT 61.294 60.000 0.00 0.00 0.00 3.24
2009 2607 0.776176 GGGACGGAGGGAGTAGGATA 59.224 60.000 0.00 0.00 0.00 2.59
2010 2608 1.358445 GGGACGGAGGGAGTAGGATAT 59.642 57.143 0.00 0.00 0.00 1.63
2011 2609 2.579860 GGGACGGAGGGAGTAGGATATA 59.420 54.545 0.00 0.00 0.00 0.86
2040 2639 4.991687 AGCTAGTCTTTCAGTGTTAAGTGC 59.008 41.667 0.00 0.00 0.00 4.40
2063 2662 4.002982 CACATCTGCTTGTAGTTTGCCTA 58.997 43.478 0.00 0.00 0.00 3.93
2191 2790 3.366374 GCACTAATGTTGTTGCTTCCTCC 60.366 47.826 0.00 0.00 0.00 4.30
2214 2813 1.945394 GCACTATGCAGATGAACCCAG 59.055 52.381 0.00 0.00 44.26 4.45
2240 2839 2.617274 GGTCAGCCAAACGTCCAGC 61.617 63.158 0.00 0.00 34.09 4.85
2302 2901 6.591935 TGTATTCCTTCTTGGCCTATTACTG 58.408 40.000 3.32 0.00 35.26 2.74
2323 2922 2.032030 GGCAACATTATCGGGTTCATCG 60.032 50.000 0.00 0.00 0.00 3.84
2373 2972 9.467258 CAATAATAATAGTCATTGCCAGTTTGG 57.533 33.333 0.00 0.00 41.55 3.28
2778 3379 2.026590 GGCATTGCTACCATGCGC 59.973 61.111 8.82 0.00 41.85 6.09
2854 3462 8.727100 TGGTAACACCTGATATGATAGATCTT 57.273 34.615 0.00 0.00 46.17 2.40
2954 3562 2.728007 AGGCCCATTTGCTTCTAACTC 58.272 47.619 0.00 0.00 0.00 3.01
3068 3676 2.029020 TCATGTCAGAAGTTCACCCTCG 60.029 50.000 5.50 0.00 0.00 4.63
3088 3696 2.030363 CGACCAAGCAAAACCAGCATAA 60.030 45.455 0.00 0.00 0.00 1.90
3242 3850 4.058721 TCGACATGATTACATCCCTGTG 57.941 45.455 0.00 0.00 36.79 3.66
3489 4097 6.427853 TCCATCGCTAATTTGATGTAATCTGG 59.572 38.462 11.65 0.00 45.81 3.86
3548 4156 2.583024 TGACTGGGTTCATCATTGCA 57.417 45.000 0.00 0.00 0.00 4.08
3731 4355 1.140312 AGGGTGCTCTTCTTTGTGGA 58.860 50.000 0.00 0.00 0.00 4.02
3791 4415 0.811915 CTGGAGAGTCTGGTGTACCG 59.188 60.000 0.00 0.00 39.43 4.02
3858 4482 0.618680 TGGACCATCCAGGGTGAGAG 60.619 60.000 0.00 0.00 42.67 3.20
4043 4667 1.271163 GCTGGGGTAGTTGTACTTGCA 60.271 52.381 0.00 0.00 0.00 4.08
4218 4842 2.900122 TTCACAAAGATTAGCTGCGC 57.100 45.000 0.00 0.00 0.00 6.09
4433 5057 4.095932 CGCTGTATCTACTGTCCAGTGTAA 59.904 45.833 10.15 0.00 42.52 2.41
4434 5058 5.392703 CGCTGTATCTACTGTCCAGTGTAAA 60.393 44.000 10.15 0.00 42.52 2.01
4435 5059 6.574350 GCTGTATCTACTGTCCAGTGTAAAT 58.426 40.000 10.15 1.70 42.52 1.40
4448 5075 7.604927 TGTCCAGTGTAAATAATACTCCAACAC 59.395 37.037 0.00 0.00 36.79 3.32
4472 5099 1.203237 TGCAGCTAGTGGAAGGCATA 58.797 50.000 0.00 0.00 0.00 3.14
4474 5101 1.811941 GCAGCTAGTGGAAGGCATACC 60.812 57.143 0.00 0.00 0.00 2.73
4837 5464 7.473735 TCTCATAGATCCCTTGCTTGTATAG 57.526 40.000 0.00 0.00 0.00 1.31
4860 5487 3.242478 CCGAGTTTTGTTGTCGTAGCAAA 60.242 43.478 0.00 1.77 37.65 3.68
5365 5992 1.877443 ACATAACTTGGACAACACCGC 59.123 47.619 0.00 0.00 0.00 5.68
5369 5997 2.264005 ACTTGGACAACACCGCATTA 57.736 45.000 0.00 0.00 0.00 1.90
5372 6000 1.133869 GGACAACACCGCATTACGC 59.866 57.895 0.00 0.00 41.76 4.42
5388 6016 5.052172 GCATTACGCTGCACATAAAGATTTG 60.052 40.000 0.00 0.00 41.87 2.32
5395 6023 6.389906 GCTGCACATAAAGATTTGGTAACTT 58.610 36.000 0.00 0.00 37.61 2.66
5488 6157 2.299503 GACTCTCCGCTGCTTACCCC 62.300 65.000 0.00 0.00 0.00 4.95
5507 6176 0.860533 CGCAATTGGCACCACAAAAG 59.139 50.000 7.72 0.00 45.17 2.27
5560 6229 2.659428 AGCTCTGCTGTTGAAAAACCT 58.341 42.857 0.00 0.00 37.57 3.50
5568 6237 4.021544 TGCTGTTGAAAAACCTGTGTTTCT 60.022 37.500 12.77 0.00 43.80 2.52
5570 6239 4.241681 TGTTGAAAAACCTGTGTTTCTGC 58.758 39.130 12.77 7.19 43.80 4.26
5580 6249 2.186160 TGTTTCTGCGGCACTGTGG 61.186 57.895 10.21 0.00 0.00 4.17
5709 6378 5.300034 TGTTTCTTTCATGAACTGCACTGAT 59.700 36.000 7.89 0.00 0.00 2.90
5722 6391 4.813161 ACTGCACTGATATCATACAACTGC 59.187 41.667 5.72 7.16 0.00 4.40
5738 6413 0.989164 CTGCGTGCATGCAATTCTTG 59.011 50.000 31.82 16.89 45.74 3.02
5739 6414 0.597072 TGCGTGCATGCAATTCTTGA 59.403 45.000 30.70 5.07 43.02 3.02
5744 6419 2.406024 GTGCATGCAATTCTTGAACGTG 59.594 45.455 24.58 0.00 0.00 4.49
5771 6446 8.554870 TCAATACCAGACTAGAAGTAGAAGGTA 58.445 37.037 0.00 0.00 36.18 3.08
5780 6455 3.683822 AGAAGTAGAAGGTACACGACTCG 59.316 47.826 0.00 0.00 0.00 4.18
5811 6486 4.944962 TTCGTAAATCTGCTTGTCATGG 57.055 40.909 0.00 0.00 0.00 3.66
5826 6501 5.503662 TGTCATGGCAAGCTGTATAAATG 57.496 39.130 0.00 0.00 0.00 2.32
5828 6503 5.651576 TGTCATGGCAAGCTGTATAAATGAA 59.348 36.000 0.00 0.00 0.00 2.57
5830 6505 6.639686 GTCATGGCAAGCTGTATAAATGAATG 59.360 38.462 0.00 0.00 0.00 2.67
5835 6510 6.044682 GCAAGCTGTATAAATGAATGCCTTT 58.955 36.000 0.00 0.00 0.00 3.11
5836 6511 6.019318 GCAAGCTGTATAAATGAATGCCTTTG 60.019 38.462 0.00 0.00 0.00 2.77
5837 6512 6.780457 AGCTGTATAAATGAATGCCTTTGT 57.220 33.333 0.00 0.00 0.00 2.83
5838 6513 7.880160 AGCTGTATAAATGAATGCCTTTGTA 57.120 32.000 0.00 0.00 0.00 2.41
5839 6514 8.292444 AGCTGTATAAATGAATGCCTTTGTAA 57.708 30.769 0.00 0.00 0.00 2.41
5840 6515 8.408601 AGCTGTATAAATGAATGCCTTTGTAAG 58.591 33.333 0.00 0.00 0.00 2.34
5841 6516 7.168135 GCTGTATAAATGAATGCCTTTGTAAGC 59.832 37.037 0.00 0.00 0.00 3.09
5842 6517 7.488322 TGTATAAATGAATGCCTTTGTAAGCC 58.512 34.615 0.00 0.00 0.00 4.35
5843 6518 3.893326 AATGAATGCCTTTGTAAGCCC 57.107 42.857 0.00 0.00 0.00 5.19
5870 6545 1.299316 TCGAAAACGCCGTCGACTT 60.299 52.632 14.70 0.00 41.13 3.01
5896 6571 5.795972 CGTAGGTGATCCTCTATCTAGTCA 58.204 45.833 0.00 0.00 43.94 3.41
5897 6572 6.231951 CGTAGGTGATCCTCTATCTAGTCAA 58.768 44.000 0.00 0.00 43.94 3.18
5899 6574 7.228906 CGTAGGTGATCCTCTATCTAGTCAAAA 59.771 40.741 0.00 0.00 43.94 2.44
5923 6598 2.026262 TCAATTCACTACCTTCCCCTGC 60.026 50.000 0.00 0.00 0.00 4.85
5925 6600 0.984230 TTCACTACCTTCCCCTGCAG 59.016 55.000 6.78 6.78 0.00 4.41
5927 6602 0.250513 CACTACCTTCCCCTGCAGTC 59.749 60.000 13.81 0.00 0.00 3.51
5930 6605 2.741878 TACCTTCCCCTGCAGTCGGT 62.742 60.000 13.81 12.85 0.00 4.69
5958 6633 5.237779 GCAAAATGCCATGATATTTCCTTGG 59.762 40.000 0.00 0.00 37.42 3.61
5966 6641 7.126115 TGCCATGATATTTCCTTGGATCTTTTT 59.874 33.333 0.00 0.00 0.00 1.94
5967 6642 8.641541 GCCATGATATTTCCTTGGATCTTTTTA 58.358 33.333 0.00 0.00 0.00 1.52
5989 6664 1.456296 ATGCGCTCTGCTGATGAAAA 58.544 45.000 9.73 0.00 46.63 2.29
5990 6665 1.237533 TGCGCTCTGCTGATGAAAAA 58.762 45.000 9.73 0.00 46.63 1.94
5999 6674 4.036734 TCTGCTGATGAAAAACAGGTGTTC 59.963 41.667 0.00 0.00 37.25 3.18
6005 6680 3.892284 TGAAAAACAGGTGTTCCAGCTA 58.108 40.909 0.00 0.00 40.40 3.32
6036 6711 1.770294 TTGCCCTGTTCGTTTTCCTT 58.230 45.000 0.00 0.00 0.00 3.36
6045 6720 5.969435 CCTGTTCGTTTTCCTTTGTAGTTTC 59.031 40.000 0.00 0.00 0.00 2.78
6046 6721 6.403855 CCTGTTCGTTTTCCTTTGTAGTTTCA 60.404 38.462 0.00 0.00 0.00 2.69
6049 6724 6.354039 TCGTTTTCCTTTGTAGTTTCACTC 57.646 37.500 0.00 0.00 0.00 3.51
6050 6725 6.110707 TCGTTTTCCTTTGTAGTTTCACTCT 58.889 36.000 0.00 0.00 0.00 3.24
6052 6727 6.687105 CGTTTTCCTTTGTAGTTTCACTCTTG 59.313 38.462 0.00 0.00 0.00 3.02
6053 6728 5.751243 TTCCTTTGTAGTTTCACTCTTGC 57.249 39.130 0.00 0.00 0.00 4.01
6054 6729 4.776349 TCCTTTGTAGTTTCACTCTTGCA 58.224 39.130 0.00 0.00 0.00 4.08
6055 6730 5.376625 TCCTTTGTAGTTTCACTCTTGCAT 58.623 37.500 0.00 0.00 0.00 3.96
6056 6731 5.239306 TCCTTTGTAGTTTCACTCTTGCATG 59.761 40.000 0.00 0.00 0.00 4.06
6057 6732 5.239306 CCTTTGTAGTTTCACTCTTGCATGA 59.761 40.000 0.00 1.92 0.00 3.07
6058 6733 5.673337 TTGTAGTTTCACTCTTGCATGAC 57.327 39.130 0.00 0.00 0.00 3.06
6062 6737 1.418373 TTCACTCTTGCATGACGACG 58.582 50.000 0.00 0.00 0.00 5.12
6064 6739 0.710567 CACTCTTGCATGACGACGAC 59.289 55.000 0.00 0.00 0.00 4.34
6066 6741 1.406219 CTCTTGCATGACGACGACGG 61.406 60.000 12.58 0.00 44.46 4.79
6080 6755 0.871722 CGACGGCAATTTGTTGGAGA 59.128 50.000 0.00 0.00 0.00 3.71
6092 6767 7.385752 GCAATTTGTTGGAGAAATGAATCAAGA 59.614 33.333 0.00 0.00 0.00 3.02
6093 6768 8.706035 CAATTTGTTGGAGAAATGAATCAAGAC 58.294 33.333 0.00 0.00 0.00 3.01
6094 6769 5.611796 TGTTGGAGAAATGAATCAAGACG 57.388 39.130 0.00 0.00 0.00 4.18
6095 6770 4.455533 TGTTGGAGAAATGAATCAAGACGG 59.544 41.667 0.00 0.00 0.00 4.79
6096 6771 4.286297 TGGAGAAATGAATCAAGACGGT 57.714 40.909 0.00 0.00 0.00 4.83
6097 6772 4.651778 TGGAGAAATGAATCAAGACGGTT 58.348 39.130 0.00 0.00 0.00 4.44
6098 6773 5.800296 TGGAGAAATGAATCAAGACGGTTA 58.200 37.500 0.00 0.00 0.00 2.85
6099 6774 5.642063 TGGAGAAATGAATCAAGACGGTTAC 59.358 40.000 0.00 0.00 0.00 2.50
6100 6775 5.875359 GGAGAAATGAATCAAGACGGTTACT 59.125 40.000 0.00 0.00 0.00 2.24
6101 6776 6.183360 GGAGAAATGAATCAAGACGGTTACTG 60.183 42.308 0.00 0.00 0.00 2.74
6102 6777 5.643777 AGAAATGAATCAAGACGGTTACTGG 59.356 40.000 0.00 0.00 0.00 4.00
6103 6778 2.695359 TGAATCAAGACGGTTACTGGC 58.305 47.619 0.00 0.00 0.00 4.85
6104 6779 2.007608 GAATCAAGACGGTTACTGGCC 58.992 52.381 0.00 0.00 0.00 5.36
6105 6780 1.276622 ATCAAGACGGTTACTGGCCT 58.723 50.000 3.32 0.00 0.00 5.19
6106 6781 1.927487 TCAAGACGGTTACTGGCCTA 58.073 50.000 3.32 0.00 0.00 3.93
6107 6782 2.463752 TCAAGACGGTTACTGGCCTAT 58.536 47.619 3.32 0.00 0.00 2.57
6108 6783 2.835764 TCAAGACGGTTACTGGCCTATT 59.164 45.455 3.32 0.00 0.00 1.73
6109 6784 4.025360 TCAAGACGGTTACTGGCCTATTA 58.975 43.478 3.32 0.00 0.00 0.98
6110 6785 4.652421 TCAAGACGGTTACTGGCCTATTAT 59.348 41.667 3.32 0.00 0.00 1.28
6111 6786 5.834742 TCAAGACGGTTACTGGCCTATTATA 59.165 40.000 3.32 0.00 0.00 0.98
6112 6787 6.495872 TCAAGACGGTTACTGGCCTATTATAT 59.504 38.462 3.32 0.00 0.00 0.86
6113 6788 6.930068 AGACGGTTACTGGCCTATTATATT 57.070 37.500 3.32 0.00 0.00 1.28
6114 6789 8.308931 CAAGACGGTTACTGGCCTATTATATTA 58.691 37.037 3.32 0.00 0.00 0.98
6115 6790 8.426569 AGACGGTTACTGGCCTATTATATTAA 57.573 34.615 3.32 0.00 0.00 1.40
6116 6791 9.043548 AGACGGTTACTGGCCTATTATATTAAT 57.956 33.333 3.32 0.00 0.00 1.40
6117 6792 9.310716 GACGGTTACTGGCCTATTATATTAATC 57.689 37.037 3.32 0.00 0.00 1.75
6118 6793 8.818860 ACGGTTACTGGCCTATTATATTAATCA 58.181 33.333 3.32 0.00 0.00 2.57
6119 6794 9.661563 CGGTTACTGGCCTATTATATTAATCAA 57.338 33.333 3.32 0.00 0.00 2.57
6124 6799 9.338968 ACTGGCCTATTATATTAATCAAGGAGA 57.661 33.333 3.32 0.00 0.00 3.71
6125 6800 9.829507 CTGGCCTATTATATTAATCAAGGAGAG 57.170 37.037 3.32 0.00 0.00 3.20
6126 6801 9.560860 TGGCCTATTATATTAATCAAGGAGAGA 57.439 33.333 3.32 0.00 0.00 3.10
6140 6815 9.930158 AATCAAGGAGAGAATAGAGTTACTAGT 57.070 33.333 0.00 0.00 34.35 2.57
6141 6816 9.930158 ATCAAGGAGAGAATAGAGTTACTAGTT 57.070 33.333 0.00 0.00 34.35 2.24
6142 6817 9.756571 TCAAGGAGAGAATAGAGTTACTAGTTT 57.243 33.333 0.00 0.00 34.35 2.66
6143 6818 9.796120 CAAGGAGAGAATAGAGTTACTAGTTTG 57.204 37.037 0.00 0.00 34.35 2.93
6144 6819 9.536510 AAGGAGAGAATAGAGTTACTAGTTTGT 57.463 33.333 0.00 0.00 34.35 2.83
6145 6820 9.536510 AGGAGAGAATAGAGTTACTAGTTTGTT 57.463 33.333 0.00 0.00 34.35 2.83
6160 6835 8.422973 ACTAGTTTGTTTTACAATACGACACA 57.577 30.769 0.00 0.00 38.00 3.72
6161 6836 9.048446 ACTAGTTTGTTTTACAATACGACACAT 57.952 29.630 0.00 0.00 38.00 3.21
6162 6837 9.313323 CTAGTTTGTTTTACAATACGACACATG 57.687 33.333 0.00 0.00 38.00 3.21
6163 6838 7.136119 AGTTTGTTTTACAATACGACACATGG 58.864 34.615 0.00 0.00 38.00 3.66
6164 6839 6.862711 TTGTTTTACAATACGACACATGGA 57.137 33.333 0.00 0.00 32.34 3.41
6165 6840 7.441890 TTGTTTTACAATACGACACATGGAT 57.558 32.000 0.00 0.00 32.34 3.41
6166 6841 6.836953 TGTTTTACAATACGACACATGGATG 58.163 36.000 0.00 0.00 0.00 3.51
6167 6842 6.128145 TGTTTTACAATACGACACATGGATGG 60.128 38.462 0.00 0.00 0.00 3.51
6168 6843 2.917933 ACAATACGACACATGGATGGG 58.082 47.619 0.00 0.00 37.19 4.00
6169 6844 1.603802 CAATACGACACATGGATGGGC 59.396 52.381 0.00 0.00 33.50 5.36
6170 6845 0.108585 ATACGACACATGGATGGGCC 59.891 55.000 0.00 0.00 33.50 5.80
6178 6853 3.586543 TGGATGGGCCAGTGTCAA 58.413 55.556 13.78 0.00 43.33 3.18
6179 6854 2.086363 TGGATGGGCCAGTGTCAAT 58.914 52.632 13.78 0.00 43.33 2.57
6180 6855 0.409092 TGGATGGGCCAGTGTCAATT 59.591 50.000 13.78 0.00 43.33 2.32
6181 6856 1.203162 TGGATGGGCCAGTGTCAATTT 60.203 47.619 13.78 0.00 43.33 1.82
6182 6857 1.205417 GGATGGGCCAGTGTCAATTTG 59.795 52.381 13.78 0.00 36.34 2.32
6183 6858 0.609662 ATGGGCCAGTGTCAATTTGC 59.390 50.000 13.78 0.00 0.00 3.68
6184 6859 0.469705 TGGGCCAGTGTCAATTTGCT 60.470 50.000 0.00 0.00 0.00 3.91
6185 6860 0.037975 GGGCCAGTGTCAATTTGCTG 60.038 55.000 4.39 0.00 0.00 4.41
6191 6866 4.156664 CAGTGTCAATTTGCTGGAGAAG 57.843 45.455 0.00 0.00 0.00 2.85
6199 6874 2.261671 GCTGGAGAAGCGAACGGA 59.738 61.111 0.00 0.00 43.45 4.69
6200 6875 1.374252 GCTGGAGAAGCGAACGGAA 60.374 57.895 0.00 0.00 43.45 4.30
6201 6876 1.627550 GCTGGAGAAGCGAACGGAAC 61.628 60.000 0.00 0.00 43.45 3.62
6202 6877 0.319555 CTGGAGAAGCGAACGGAACA 60.320 55.000 0.00 0.00 0.00 3.18
6203 6878 0.319555 TGGAGAAGCGAACGGAACAG 60.320 55.000 0.00 0.00 0.00 3.16
6204 6879 1.627550 GGAGAAGCGAACGGAACAGC 61.628 60.000 0.00 0.00 0.00 4.40
6205 6880 1.945776 GAGAAGCGAACGGAACAGCG 61.946 60.000 0.00 0.00 34.34 5.18
6206 6881 2.279918 AAGCGAACGGAACAGCGT 60.280 55.556 0.00 0.00 34.34 5.07
6207 6882 1.828331 GAAGCGAACGGAACAGCGTT 61.828 55.000 0.00 0.00 34.34 4.84
6208 6883 1.433837 AAGCGAACGGAACAGCGTTT 61.434 50.000 0.00 0.00 34.34 3.60
6209 6884 1.438222 GCGAACGGAACAGCGTTTC 60.438 57.895 0.00 0.00 0.00 2.78
6210 6885 1.828331 GCGAACGGAACAGCGTTTCT 61.828 55.000 0.00 0.00 0.00 2.52
6211 6886 0.580104 CGAACGGAACAGCGTTTCTT 59.420 50.000 0.00 0.00 0.00 2.52
6212 6887 1.656429 CGAACGGAACAGCGTTTCTTG 60.656 52.381 0.00 0.00 0.00 3.02
6213 6888 0.028902 AACGGAACAGCGTTTCTTGC 59.971 50.000 0.00 0.00 0.00 4.01
6214 6889 1.438710 CGGAACAGCGTTTCTTGCG 60.439 57.895 1.08 0.00 37.44 4.85
6215 6890 1.647084 GGAACAGCGTTTCTTGCGT 59.353 52.632 1.08 0.00 37.44 5.24
6216 6891 0.384353 GGAACAGCGTTTCTTGCGTC 60.384 55.000 1.08 0.00 37.44 5.19
6217 6892 0.303493 GAACAGCGTTTCTTGCGTCA 59.697 50.000 0.00 0.00 37.44 4.35
6218 6893 0.730265 AACAGCGTTTCTTGCGTCAA 59.270 45.000 0.00 0.00 37.44 3.18
6219 6894 0.027586 ACAGCGTTTCTTGCGTCAAC 59.972 50.000 0.00 0.00 37.44 3.18
6220 6895 0.304705 CAGCGTTTCTTGCGTCAACT 59.695 50.000 0.00 0.00 37.44 3.16
6221 6896 0.304705 AGCGTTTCTTGCGTCAACTG 59.695 50.000 0.00 0.00 37.44 3.16
6222 6897 1.262166 GCGTTTCTTGCGTCAACTGC 61.262 55.000 0.00 0.00 0.00 4.40
6223 6898 0.027455 CGTTTCTTGCGTCAACTGCA 59.973 50.000 0.00 0.00 41.38 4.41
6228 6903 2.712984 TTGCGTCAACTGCAATGGA 58.287 47.368 7.84 0.00 46.62 3.41
6229 6904 1.028130 TTGCGTCAACTGCAATGGAA 58.972 45.000 7.84 0.00 46.62 3.53
6230 6905 1.246649 TGCGTCAACTGCAATGGAAT 58.753 45.000 0.00 0.00 39.87 3.01
6231 6906 1.068402 TGCGTCAACTGCAATGGAATG 60.068 47.619 0.00 0.00 39.87 2.67
6232 6907 1.621107 CGTCAACTGCAATGGAATGC 58.379 50.000 0.00 0.00 46.58 3.56
6233 6908 1.733389 CGTCAACTGCAATGGAATGCC 60.733 52.381 0.00 0.00 45.83 4.40
6242 6917 3.169378 TGGAATGCCAGACCTGCA 58.831 55.556 0.00 0.00 39.92 4.41
6243 6918 1.459812 TGGAATGCCAGACCTGCAA 59.540 52.632 0.00 0.00 42.92 4.08
6244 6919 0.895100 TGGAATGCCAGACCTGCAAC 60.895 55.000 0.00 0.00 42.92 4.17
6245 6920 0.895100 GGAATGCCAGACCTGCAACA 60.895 55.000 0.00 0.00 42.92 3.33
6246 6921 0.961019 GAATGCCAGACCTGCAACAA 59.039 50.000 0.00 0.00 42.92 2.83
6247 6922 1.547372 GAATGCCAGACCTGCAACAAT 59.453 47.619 0.00 0.00 42.92 2.71
6248 6923 1.180029 ATGCCAGACCTGCAACAATC 58.820 50.000 0.00 0.00 42.92 2.67
6249 6924 0.895100 TGCCAGACCTGCAACAATCC 60.895 55.000 0.00 0.00 35.40 3.01
6250 6925 0.610232 GCCAGACCTGCAACAATCCT 60.610 55.000 0.00 0.00 0.00 3.24
6251 6926 1.915141 CCAGACCTGCAACAATCCTT 58.085 50.000 0.00 0.00 0.00 3.36
6252 6927 2.242043 CCAGACCTGCAACAATCCTTT 58.758 47.619 0.00 0.00 0.00 3.11
6253 6928 2.229784 CCAGACCTGCAACAATCCTTTC 59.770 50.000 0.00 0.00 0.00 2.62
6254 6929 2.886523 CAGACCTGCAACAATCCTTTCA 59.113 45.455 0.00 0.00 0.00 2.69
6255 6930 3.508793 CAGACCTGCAACAATCCTTTCAT 59.491 43.478 0.00 0.00 0.00 2.57
6256 6931 3.508793 AGACCTGCAACAATCCTTTCATG 59.491 43.478 0.00 0.00 0.00 3.07
6257 6932 3.233507 ACCTGCAACAATCCTTTCATGT 58.766 40.909 0.00 0.00 0.00 3.21
6258 6933 4.406456 ACCTGCAACAATCCTTTCATGTA 58.594 39.130 0.00 0.00 0.00 2.29
6259 6934 4.218417 ACCTGCAACAATCCTTTCATGTAC 59.782 41.667 0.00 0.00 0.00 2.90
6260 6935 4.406069 CTGCAACAATCCTTTCATGTACG 58.594 43.478 0.00 0.00 0.00 3.67
6261 6936 3.818210 TGCAACAATCCTTTCATGTACGT 59.182 39.130 0.00 0.00 0.00 3.57
6262 6937 4.998033 TGCAACAATCCTTTCATGTACGTA 59.002 37.500 0.00 0.00 0.00 3.57
6263 6938 5.121611 TGCAACAATCCTTTCATGTACGTAG 59.878 40.000 0.00 0.00 0.00 3.51
6265 6940 6.534059 CAACAATCCTTTCATGTACGTAGTG 58.466 40.000 0.00 0.00 45.73 2.74
6266 6941 5.790593 ACAATCCTTTCATGTACGTAGTGT 58.209 37.500 0.00 0.00 45.73 3.55
6267 6942 5.867716 ACAATCCTTTCATGTACGTAGTGTC 59.132 40.000 0.00 0.00 45.73 3.67
6268 6943 5.654603 ATCCTTTCATGTACGTAGTGTCA 57.345 39.130 0.00 0.00 45.73 3.58
6269 6944 5.456548 TCCTTTCATGTACGTAGTGTCAA 57.543 39.130 0.00 0.00 45.73 3.18
6270 6945 5.224888 TCCTTTCATGTACGTAGTGTCAAC 58.775 41.667 0.00 0.00 45.73 3.18
6271 6946 5.010314 TCCTTTCATGTACGTAGTGTCAACT 59.990 40.000 0.00 0.00 45.73 3.16
6272 6947 5.694910 CCTTTCATGTACGTAGTGTCAACTT 59.305 40.000 0.00 0.00 45.73 2.66
6273 6948 6.202188 CCTTTCATGTACGTAGTGTCAACTTT 59.798 38.462 0.00 0.00 45.73 2.66
6274 6949 6.519353 TTCATGTACGTAGTGTCAACTTTG 57.481 37.500 0.00 0.00 45.73 2.77
6275 6950 5.834169 TCATGTACGTAGTGTCAACTTTGA 58.166 37.500 0.00 0.00 45.73 2.69
6276 6951 6.274579 TCATGTACGTAGTGTCAACTTTGAA 58.725 36.000 0.00 0.00 45.73 2.69
6277 6952 6.419710 TCATGTACGTAGTGTCAACTTTGAAG 59.580 38.462 0.00 0.00 45.73 3.02
6278 6953 5.653507 TGTACGTAGTGTCAACTTTGAAGT 58.346 37.500 0.00 0.00 45.73 3.01
6279 6954 6.794374 TGTACGTAGTGTCAACTTTGAAGTA 58.206 36.000 0.00 0.00 45.73 2.24
6280 6955 6.914215 TGTACGTAGTGTCAACTTTGAAGTAG 59.086 38.462 0.00 0.00 45.73 2.57
6281 6956 4.743644 ACGTAGTGTCAACTTTGAAGTAGC 59.256 41.667 0.00 0.00 42.51 3.58
6282 6957 4.743151 CGTAGTGTCAACTTTGAAGTAGCA 59.257 41.667 0.00 0.00 38.57 3.49
6283 6958 5.107837 CGTAGTGTCAACTTTGAAGTAGCAG 60.108 44.000 0.00 0.00 38.57 4.24
6284 6959 4.770795 AGTGTCAACTTTGAAGTAGCAGT 58.229 39.130 0.00 0.00 38.57 4.40
6285 6960 5.914033 AGTGTCAACTTTGAAGTAGCAGTA 58.086 37.500 0.00 0.00 38.57 2.74
6286 6961 5.986135 AGTGTCAACTTTGAAGTAGCAGTAG 59.014 40.000 0.00 0.00 38.57 2.57
6287 6962 5.753921 GTGTCAACTTTGAAGTAGCAGTAGT 59.246 40.000 0.00 0.00 38.57 2.73
6288 6963 6.258068 GTGTCAACTTTGAAGTAGCAGTAGTT 59.742 38.462 0.00 0.00 38.57 2.24
6289 6964 6.257849 TGTCAACTTTGAAGTAGCAGTAGTTG 59.742 38.462 0.00 0.00 40.16 3.16
6290 6965 5.758296 TCAACTTTGAAGTAGCAGTAGTTGG 59.242 40.000 0.00 0.00 39.76 3.77
6291 6966 4.642429 ACTTTGAAGTAGCAGTAGTTGGG 58.358 43.478 0.00 0.00 37.52 4.12
6292 6967 4.347000 ACTTTGAAGTAGCAGTAGTTGGGA 59.653 41.667 0.00 0.00 37.52 4.37
6293 6968 3.955650 TGAAGTAGCAGTAGTTGGGAC 57.044 47.619 0.00 0.00 0.00 4.46
6294 6969 2.230508 TGAAGTAGCAGTAGTTGGGACG 59.769 50.000 0.00 0.00 0.00 4.79
6295 6970 2.211250 AGTAGCAGTAGTTGGGACGA 57.789 50.000 0.00 0.00 0.00 4.20
6296 6971 2.736347 AGTAGCAGTAGTTGGGACGAT 58.264 47.619 0.00 0.00 0.00 3.73
6297 6972 3.097614 AGTAGCAGTAGTTGGGACGATT 58.902 45.455 0.00 0.00 0.00 3.34
6298 6973 2.674796 AGCAGTAGTTGGGACGATTC 57.325 50.000 0.00 0.00 0.00 2.52
6299 6974 1.899814 AGCAGTAGTTGGGACGATTCA 59.100 47.619 0.00 0.00 0.00 2.57
6300 6975 2.000447 GCAGTAGTTGGGACGATTCAC 59.000 52.381 0.00 0.00 0.00 3.18
6302 6977 2.094906 CAGTAGTTGGGACGATTCACGA 60.095 50.000 0.00 0.00 45.77 4.35
6303 6978 2.094854 AGTAGTTGGGACGATTCACGAC 60.095 50.000 0.00 0.00 45.77 4.34
6304 6979 0.388134 AGTTGGGACGATTCACGACG 60.388 55.000 0.00 0.00 43.70 5.12
6305 6980 1.735198 TTGGGACGATTCACGACGC 60.735 57.895 0.00 0.00 45.77 5.19
6306 6981 3.245315 GGGACGATTCACGACGCG 61.245 66.667 3.53 3.53 45.77 6.01
6307 6982 3.245315 GGACGATTCACGACGCGG 61.245 66.667 12.47 0.00 45.77 6.46
6308 6983 2.202388 GACGATTCACGACGCGGA 60.202 61.111 12.47 0.00 45.77 5.54
6309 6984 1.585521 GACGATTCACGACGCGGAT 60.586 57.895 12.47 0.00 45.77 4.18
6310 6985 1.138047 GACGATTCACGACGCGGATT 61.138 55.000 12.47 0.00 45.77 3.01
6311 6986 1.138047 ACGATTCACGACGCGGATTC 61.138 55.000 12.47 0.00 45.77 2.52
6312 6987 1.137459 CGATTCACGACGCGGATTCA 61.137 55.000 12.47 0.00 45.77 2.57
6313 6988 1.209128 GATTCACGACGCGGATTCAT 58.791 50.000 12.47 0.00 0.00 2.57
6314 6989 1.190323 GATTCACGACGCGGATTCATC 59.810 52.381 12.47 0.61 0.00 2.92
6315 6990 0.109039 TTCACGACGCGGATTCATCA 60.109 50.000 12.47 0.00 0.00 3.07
6316 6991 0.800683 TCACGACGCGGATTCATCAC 60.801 55.000 12.47 0.00 0.00 3.06
6317 6992 1.518572 ACGACGCGGATTCATCACC 60.519 57.895 12.47 0.00 0.00 4.02
6318 6993 1.518352 CGACGCGGATTCATCACCA 60.518 57.895 12.47 0.00 0.00 4.17
6319 6994 1.482621 CGACGCGGATTCATCACCAG 61.483 60.000 12.47 0.00 0.00 4.00
6320 6995 0.179111 GACGCGGATTCATCACCAGA 60.179 55.000 12.47 0.00 0.00 3.86
6321 6996 0.249120 ACGCGGATTCATCACCAGAA 59.751 50.000 12.47 0.00 0.00 3.02
6322 6997 1.338674 ACGCGGATTCATCACCAGAAA 60.339 47.619 12.47 0.00 0.00 2.52
6323 6998 1.737236 CGCGGATTCATCACCAGAAAA 59.263 47.619 0.00 0.00 0.00 2.29
6324 6999 2.223112 CGCGGATTCATCACCAGAAAAG 60.223 50.000 0.00 0.00 0.00 2.27
6325 7000 2.478539 GCGGATTCATCACCAGAAAAGC 60.479 50.000 0.00 0.00 0.00 3.51
6326 7001 2.223112 CGGATTCATCACCAGAAAAGCG 60.223 50.000 0.00 0.00 0.00 4.68
6327 7002 2.478539 GGATTCATCACCAGAAAAGCGC 60.479 50.000 0.00 0.00 0.00 5.92
6328 7003 0.881118 TTCATCACCAGAAAAGCGCC 59.119 50.000 2.29 0.00 0.00 6.53
6329 7004 0.960364 TCATCACCAGAAAAGCGCCC 60.960 55.000 2.29 0.00 0.00 6.13
6330 7005 0.962356 CATCACCAGAAAAGCGCCCT 60.962 55.000 2.29 0.00 0.00 5.19
6331 7006 0.678048 ATCACCAGAAAAGCGCCCTC 60.678 55.000 2.29 0.00 0.00 4.30
6332 7007 2.358737 ACCAGAAAAGCGCCCTCG 60.359 61.111 2.29 0.00 39.07 4.63
6333 7008 2.047274 CCAGAAAAGCGCCCTCGA 60.047 61.111 2.29 0.00 38.10 4.04
6334 7009 2.391389 CCAGAAAAGCGCCCTCGAC 61.391 63.158 2.29 0.00 38.10 4.20
6335 7010 2.047179 AGAAAAGCGCCCTCGACC 60.047 61.111 2.29 0.00 38.10 4.79
6336 7011 3.488090 GAAAAGCGCCCTCGACCG 61.488 66.667 2.29 0.00 38.10 4.79
6337 7012 3.927163 GAAAAGCGCCCTCGACCGA 62.927 63.158 2.29 0.00 38.10 4.69
6338 7013 3.524648 AAAAGCGCCCTCGACCGAA 62.525 57.895 2.29 0.00 38.10 4.30
6339 7014 2.999739 AAAAGCGCCCTCGACCGAAA 63.000 55.000 2.29 0.00 38.10 3.46
6340 7015 3.934391 AAGCGCCCTCGACCGAAAG 62.934 63.158 2.29 0.00 38.10 2.62
6373 7048 3.222855 TGCCGGGCACAAAACCTG 61.223 61.111 19.77 0.00 31.71 4.00
6374 7049 4.662961 GCCGGGCACAAAACCTGC 62.663 66.667 15.62 0.00 31.68 4.85
6375 7050 3.222855 CCGGGCACAAAACCTGCA 61.223 61.111 0.00 0.00 36.27 4.41
6376 7051 2.027460 CGGGCACAAAACCTGCAC 59.973 61.111 0.00 0.00 36.27 4.57
6377 7052 2.027460 GGGCACAAAACCTGCACG 59.973 61.111 0.00 0.00 36.27 5.34
6378 7053 2.658268 GGCACAAAACCTGCACGC 60.658 61.111 0.00 0.00 36.27 5.34
6379 7054 2.412937 GCACAAAACCTGCACGCT 59.587 55.556 0.00 0.00 34.56 5.07
6380 7055 1.658409 GCACAAAACCTGCACGCTC 60.658 57.895 0.00 0.00 34.56 5.03
6381 7056 1.369209 CACAAAACCTGCACGCTCG 60.369 57.895 0.00 0.00 0.00 5.03
6382 7057 1.817941 ACAAAACCTGCACGCTCGT 60.818 52.632 0.00 0.00 0.00 4.18
6384 7059 1.817941 AAAACCTGCACGCTCGTGT 60.818 52.632 21.30 1.26 46.90 4.49
6385 7060 2.047151 AAAACCTGCACGCTCGTGTG 62.047 55.000 21.30 12.24 46.90 3.82
6386 7061 2.916502 AAACCTGCACGCTCGTGTGA 62.917 55.000 21.30 9.49 46.90 3.58
6387 7062 3.406361 CCTGCACGCTCGTGTGAC 61.406 66.667 21.30 7.71 46.90 3.67
6388 7063 2.658268 CTGCACGCTCGTGTGACA 60.658 61.111 21.30 11.42 46.90 3.58
6389 7064 2.202810 TGCACGCTCGTGTGACAA 60.203 55.556 21.30 2.89 46.90 3.18
6390 7065 1.560004 CTGCACGCTCGTGTGACAAT 61.560 55.000 21.30 0.00 46.90 2.71
6391 7066 1.130613 GCACGCTCGTGTGACAATC 59.869 57.895 21.30 1.90 46.90 2.67
6392 7067 1.781555 CACGCTCGTGTGACAATCC 59.218 57.895 13.66 0.00 42.55 3.01
6393 7068 0.943835 CACGCTCGTGTGACAATCCA 60.944 55.000 13.66 0.00 42.55 3.41
6394 7069 0.249699 ACGCTCGTGTGACAATCCAA 60.250 50.000 4.85 0.00 0.00 3.53
6395 7070 0.439985 CGCTCGTGTGACAATCCAAG 59.560 55.000 0.00 0.00 0.00 3.61
6396 7071 1.795768 GCTCGTGTGACAATCCAAGA 58.204 50.000 0.00 0.00 0.00 3.02
6397 7072 2.143122 GCTCGTGTGACAATCCAAGAA 58.857 47.619 0.00 0.00 0.00 2.52
6398 7073 2.744202 GCTCGTGTGACAATCCAAGAAT 59.256 45.455 0.00 0.00 0.00 2.40
6399 7074 3.425359 GCTCGTGTGACAATCCAAGAATG 60.425 47.826 0.00 0.00 0.00 2.67
6409 7084 2.471255 CCAAGAATGGTCGTCCTGC 58.529 57.895 0.00 0.00 42.18 4.85
6410 7085 1.361668 CCAAGAATGGTCGTCCTGCG 61.362 60.000 0.00 0.00 42.18 5.18
6411 7086 0.670546 CAAGAATGGTCGTCCTGCGT 60.671 55.000 0.00 0.00 42.13 5.24
6412 7087 0.892755 AAGAATGGTCGTCCTGCGTA 59.107 50.000 0.00 0.00 42.13 4.42
6413 7088 1.112113 AGAATGGTCGTCCTGCGTAT 58.888 50.000 0.00 0.00 42.13 3.06
6414 7089 2.304092 AGAATGGTCGTCCTGCGTATA 58.696 47.619 0.00 0.00 42.13 1.47
6415 7090 2.034305 AGAATGGTCGTCCTGCGTATAC 59.966 50.000 0.00 0.00 42.13 1.47
6416 7091 1.688772 ATGGTCGTCCTGCGTATACT 58.311 50.000 0.56 0.00 42.13 2.12
6417 7092 1.019673 TGGTCGTCCTGCGTATACTC 58.980 55.000 0.56 0.00 42.13 2.59
6418 7093 0.310232 GGTCGTCCTGCGTATACTCC 59.690 60.000 0.56 0.00 42.13 3.85
6419 7094 0.310232 GTCGTCCTGCGTATACTCCC 59.690 60.000 0.56 0.00 42.13 4.30
6420 7095 0.182061 TCGTCCTGCGTATACTCCCT 59.818 55.000 0.56 0.00 42.13 4.20
6421 7096 0.592148 CGTCCTGCGTATACTCCCTC 59.408 60.000 0.56 0.00 35.54 4.30
6422 7097 0.960286 GTCCTGCGTATACTCCCTCC 59.040 60.000 0.56 0.00 0.00 4.30
6423 7098 0.536687 TCCTGCGTATACTCCCTCCG 60.537 60.000 0.56 0.00 0.00 4.63
6424 7099 0.822532 CCTGCGTATACTCCCTCCGT 60.823 60.000 0.56 0.00 0.00 4.69
6425 7100 1.030457 CTGCGTATACTCCCTCCGTT 58.970 55.000 0.56 0.00 0.00 4.44
6426 7101 1.001597 CTGCGTATACTCCCTCCGTTC 60.002 57.143 0.56 0.00 0.00 3.95
6427 7102 1.316651 GCGTATACTCCCTCCGTTCT 58.683 55.000 0.56 0.00 0.00 3.01
6428 7103 1.680207 GCGTATACTCCCTCCGTTCTT 59.320 52.381 0.56 0.00 0.00 2.52
6429 7104 2.543238 GCGTATACTCCCTCCGTTCTTG 60.543 54.545 0.56 0.00 0.00 3.02
6430 7105 2.947652 CGTATACTCCCTCCGTTCTTGA 59.052 50.000 0.56 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
168 170 2.478890 GCTCCAATGCAGCAGCGAT 61.479 57.895 0.00 0.00 46.23 4.58
197 199 1.349234 CGTCGCAGTCATCATCACAA 58.651 50.000 0.00 0.00 0.00 3.33
230 232 1.374631 CAGTGCAGCGCTGGAGTTA 60.375 57.895 33.39 2.59 38.21 2.24
260 262 3.060000 TGGTCGTCGTCTCGGCAT 61.060 61.111 0.00 0.00 37.15 4.40
475 477 1.226686 GATGCATCGCCGATGAGCTT 61.227 55.000 29.82 13.68 42.09 3.74
539 541 1.671979 CATCACACCATCGAAGCCAT 58.328 50.000 0.00 0.00 0.00 4.40
636 638 4.025401 CACCTTGCGTTGGCGACC 62.025 66.667 0.00 0.00 44.10 4.79
643 645 2.281761 CTCCTGGCACCTTGCGTT 60.282 61.111 0.00 0.00 46.21 4.84
659 675 2.464403 AAAGCAGGACAGCACCCCT 61.464 57.895 0.00 0.00 36.85 4.79
717 733 3.464828 TGGCCTTTCTTCTCTAATCCCT 58.535 45.455 3.32 0.00 0.00 4.20
788 804 1.630126 AATCAGGCGGATGTCCAGCT 61.630 55.000 0.00 0.00 36.02 4.24
794 810 1.065491 TGCTACAAATCAGGCGGATGT 60.065 47.619 0.00 0.00 36.02 3.06
795 811 1.600957 CTGCTACAAATCAGGCGGATG 59.399 52.381 0.00 0.00 36.02 3.51
796 812 1.475751 CCTGCTACAAATCAGGCGGAT 60.476 52.381 0.00 0.00 42.79 4.18
797 813 0.107703 CCTGCTACAAATCAGGCGGA 60.108 55.000 0.00 0.00 42.79 5.54
798 814 2.397751 CCTGCTACAAATCAGGCGG 58.602 57.895 0.00 0.00 42.79 6.13
802 818 1.026182 TGGCGCCTGCTACAAATCAG 61.026 55.000 29.70 0.00 42.25 2.90
803 819 0.607762 TTGGCGCCTGCTACAAATCA 60.608 50.000 29.70 0.00 42.25 2.57
804 820 0.525761 TTTGGCGCCTGCTACAAATC 59.474 50.000 29.70 0.00 42.25 2.17
805 821 0.527565 CTTTGGCGCCTGCTACAAAT 59.472 50.000 29.70 0.00 42.25 2.32
806 822 0.536233 TCTTTGGCGCCTGCTACAAA 60.536 50.000 29.70 17.12 42.25 2.83
807 823 0.955428 CTCTTTGGCGCCTGCTACAA 60.955 55.000 29.70 9.58 42.25 2.41
808 824 1.375908 CTCTTTGGCGCCTGCTACA 60.376 57.895 29.70 1.94 42.25 2.74
809 825 0.108329 TACTCTTTGGCGCCTGCTAC 60.108 55.000 29.70 0.00 42.25 3.58
810 826 0.611200 TTACTCTTTGGCGCCTGCTA 59.389 50.000 29.70 3.37 42.25 3.49
811 827 0.250727 TTTACTCTTTGGCGCCTGCT 60.251 50.000 29.70 6.43 42.25 4.24
812 828 0.109735 GTTTACTCTTTGGCGCCTGC 60.110 55.000 29.70 0.50 41.71 4.85
813 829 0.521735 GGTTTACTCTTTGGCGCCTG 59.478 55.000 29.70 17.57 0.00 4.85
814 830 0.109723 TGGTTTACTCTTTGGCGCCT 59.890 50.000 29.70 8.67 0.00 5.52
815 831 0.521735 CTGGTTTACTCTTTGGCGCC 59.478 55.000 22.73 22.73 0.00 6.53
816 832 1.519408 TCTGGTTTACTCTTTGGCGC 58.481 50.000 0.00 0.00 0.00 6.53
817 833 3.139077 AGTTCTGGTTTACTCTTTGGCG 58.861 45.455 0.00 0.00 0.00 5.69
818 834 6.628919 TTTAGTTCTGGTTTACTCTTTGGC 57.371 37.500 0.00 0.00 0.00 4.52
819 835 8.297426 GGATTTTAGTTCTGGTTTACTCTTTGG 58.703 37.037 0.00 0.00 0.00 3.28
820 836 8.846211 TGGATTTTAGTTCTGGTTTACTCTTTG 58.154 33.333 0.00 0.00 0.00 2.77
821 837 8.990163 TGGATTTTAGTTCTGGTTTACTCTTT 57.010 30.769 0.00 0.00 0.00 2.52
822 838 8.990163 TTGGATTTTAGTTCTGGTTTACTCTT 57.010 30.769 0.00 0.00 0.00 2.85
823 839 8.990163 TTTGGATTTTAGTTCTGGTTTACTCT 57.010 30.769 0.00 0.00 0.00 3.24
824 840 9.459640 GTTTTGGATTTTAGTTCTGGTTTACTC 57.540 33.333 0.00 0.00 0.00 2.59
825 841 8.973182 TGTTTTGGATTTTAGTTCTGGTTTACT 58.027 29.630 0.00 0.00 0.00 2.24
826 842 9.589111 TTGTTTTGGATTTTAGTTCTGGTTTAC 57.411 29.630 0.00 0.00 0.00 2.01
832 848 7.634432 GCGTTTTTGTTTTGGATTTTAGTTCTG 59.366 33.333 0.00 0.00 0.00 3.02
840 856 5.163804 GGTTGAGCGTTTTTGTTTTGGATTT 60.164 36.000 0.00 0.00 0.00 2.17
864 880 1.216941 ACGTGGCGGTGTTTAACGAG 61.217 55.000 0.00 0.00 37.66 4.18
899 917 4.072088 GGCGTCTCGTGTTTGCGG 62.072 66.667 0.00 0.00 0.00 5.69
901 919 3.277742 GACGGCGTCTCGTGTTTGC 62.278 63.158 31.15 2.27 43.96 3.68
978 996 2.279918 GCGGTCCGTGTGAAGTGT 60.280 61.111 13.94 0.00 0.00 3.55
980 998 2.279918 GTGCGGTCCGTGTGAAGT 60.280 61.111 13.94 0.00 0.00 3.01
1493 1569 3.638484 CGGATCAAAGGAACACCAAAAC 58.362 45.455 0.00 0.00 0.00 2.43
1521 1604 0.448990 CATCATCAACACAGCCACCG 59.551 55.000 0.00 0.00 0.00 4.94
1543 1626 3.026694 GGAAATCTGAACCATCAAGGGG 58.973 50.000 0.00 0.00 43.89 4.79
1639 1736 3.883830 ACAAAAACACTGTGGAATGCA 57.116 38.095 13.09 0.00 0.00 3.96
1645 1742 4.158764 TCCCAAACTACAAAAACACTGTGG 59.841 41.667 13.09 0.00 0.00 4.17
1733 2321 5.363101 TGCACATTCTATTAGGAGAAGCAG 58.637 41.667 0.00 0.00 38.80 4.24
1753 2344 2.918345 GCACGGCAGAACCATTGCA 61.918 57.895 0.00 0.00 43.68 4.08
1908 2506 0.926293 TATCCCCTCTGCCCAAAAGG 59.074 55.000 0.00 0.00 39.47 3.11
1916 2514 8.256356 ACATTATGAGTATATATCCCCTCTGC 57.744 38.462 0.00 0.00 0.00 4.26
1972 2570 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
1973 2571 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
1974 2572 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
1975 2573 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
1976 2574 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
1978 2576 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
1979 2577 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
1980 2578 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
1981 2579 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
1982 2580 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
1983 2581 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
1984 2582 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
1985 2583 2.492940 CCTACTCCCTCCGTCCCATAAT 60.493 54.545 0.00 0.00 0.00 1.28
1986 2584 1.133262 CCTACTCCCTCCGTCCCATAA 60.133 57.143 0.00 0.00 0.00 1.90
1987 2585 0.481567 CCTACTCCCTCCGTCCCATA 59.518 60.000 0.00 0.00 0.00 2.74
1988 2586 1.233369 CCTACTCCCTCCGTCCCAT 59.767 63.158 0.00 0.00 0.00 4.00
1989 2587 1.294426 ATCCTACTCCCTCCGTCCCA 61.294 60.000 0.00 0.00 0.00 4.37
1990 2588 0.776176 TATCCTACTCCCTCCGTCCC 59.224 60.000 0.00 0.00 0.00 4.46
1991 2589 2.903375 ATATCCTACTCCCTCCGTCC 57.097 55.000 0.00 0.00 0.00 4.79
1992 2590 3.054213 AGCTATATCCTACTCCCTCCGTC 60.054 52.174 0.00 0.00 0.00 4.79
1993 2591 2.920941 AGCTATATCCTACTCCCTCCGT 59.079 50.000 0.00 0.00 0.00 4.69
1994 2592 3.655615 AGCTATATCCTACTCCCTCCG 57.344 52.381 0.00 0.00 0.00 4.63
1995 2593 5.361571 GCTAAAGCTATATCCTACTCCCTCC 59.638 48.000 0.00 0.00 38.21 4.30
1996 2594 6.459670 GCTAAAGCTATATCCTACTCCCTC 57.540 45.833 0.00 0.00 38.21 4.30
2004 2602 8.802267 CTGAAAGACTAGCTAAAGCTATATCCT 58.198 37.037 11.92 4.91 44.88 3.24
2005 2603 8.581578 ACTGAAAGACTAGCTAAAGCTATATCC 58.418 37.037 11.92 2.95 44.90 2.59
2006 2604 9.405587 CACTGAAAGACTAGCTAAAGCTATATC 57.594 37.037 11.92 12.17 44.90 1.63
2007 2605 8.919145 ACACTGAAAGACTAGCTAAAGCTATAT 58.081 33.333 11.92 4.17 44.90 0.86
2008 2606 8.294954 ACACTGAAAGACTAGCTAAAGCTATA 57.705 34.615 11.92 0.00 44.90 1.31
2009 2607 7.176589 ACACTGAAAGACTAGCTAAAGCTAT 57.823 36.000 11.92 3.43 44.90 2.97
2010 2608 6.591750 ACACTGAAAGACTAGCTAAAGCTA 57.408 37.500 11.08 11.08 44.32 3.32
2011 2609 5.476091 ACACTGAAAGACTAGCTAAAGCT 57.524 39.130 9.80 9.80 46.74 3.74
2028 2627 2.095567 GCAGATGTGGCACTTAACACTG 60.096 50.000 19.83 15.50 38.39 3.66
2040 2639 2.095059 GGCAAACTACAAGCAGATGTGG 60.095 50.000 0.00 0.47 37.75 4.17
2076 2675 5.517411 CACATTTGTACATGTTCATGATGGC 59.483 40.000 21.96 6.71 35.03 4.40
2117 2716 1.226435 GCACACAACCGCGTGAAAA 60.226 52.632 4.92 0.00 39.34 2.29
2166 2765 5.009631 AGGAAGCAACAACATTAGTGCATA 58.990 37.500 0.00 0.00 0.00 3.14
2167 2766 3.828451 AGGAAGCAACAACATTAGTGCAT 59.172 39.130 0.00 0.00 0.00 3.96
2210 2809 1.302832 GCTGACCACCTGAACTGGG 60.303 63.158 3.07 0.00 32.45 4.45
2302 2901 2.032030 CGATGAACCCGATAATGTTGCC 60.032 50.000 0.00 0.00 0.00 4.52
2323 2922 6.606395 TGTATAAACAGAGTACCTCCTTCTCC 59.394 42.308 0.00 0.00 0.00 3.71
2359 2958 5.163364 ACACAATTAACCAAACTGGCAATGA 60.163 36.000 0.00 0.00 42.67 2.57
2476 3075 0.478072 TGGCACCACTCAACTGGATT 59.522 50.000 0.00 0.00 35.04 3.01
2660 3261 2.878406 AGGAATCGAATATTTGGGTGCG 59.122 45.455 2.78 0.00 0.00 5.34
2758 3359 0.386476 CGCATGGTAGCAATGCCATT 59.614 50.000 17.67 0.00 46.21 3.16
2954 3562 9.630098 TTAAATTCTTGAAAGCTTATCTGCAAG 57.370 29.630 0.00 9.13 38.41 4.01
3068 3676 3.658757 TTATGCTGGTTTTGCTTGGTC 57.341 42.857 0.00 0.00 0.00 4.02
3158 3766 6.000891 TCGAAAGAATCAACACTTCCAATG 57.999 37.500 0.00 0.00 37.03 2.82
3242 3850 8.558973 ACCAGCTTATCTTATCAGCATAAATC 57.441 34.615 0.00 0.00 35.88 2.17
3586 4210 8.296713 CCTTAAAGAAAAGCTGCAGTATACAAA 58.703 33.333 16.64 0.00 0.00 2.83
3600 4224 7.040409 ACAACCAGCTACATCCTTAAAGAAAAG 60.040 37.037 0.00 0.00 0.00 2.27
3791 4415 7.777095 AGTCTGAACCAGATATAGACAAGAAC 58.223 38.462 0.00 0.00 42.73 3.01
4043 4667 3.370953 GGATGTCAGGTCTATTTGTGCCT 60.371 47.826 0.00 0.00 0.00 4.75
4218 4842 1.171308 CCAGCAAATCCAGGTGTCAG 58.829 55.000 0.00 0.00 32.85 3.51
4383 5007 9.268282 AGATTAACTTAACTACTGGATTGGAGA 57.732 33.333 0.00 0.00 0.00 3.71
4385 5009 8.195436 CGAGATTAACTTAACTACTGGATTGGA 58.805 37.037 0.00 0.00 0.00 3.53
4442 5066 1.339438 ACTAGCTGCATCCAGTGTTGG 60.339 52.381 1.02 0.00 46.49 3.77
4448 5075 1.474677 CCTTCCACTAGCTGCATCCAG 60.475 57.143 1.02 0.00 42.13 3.86
4472 5099 5.171476 CAGTCACATCGTATCAAGAAAGGT 58.829 41.667 0.00 0.00 0.00 3.50
4474 5101 6.712241 AACAGTCACATCGTATCAAGAAAG 57.288 37.500 0.00 0.00 0.00 2.62
4475 5102 8.771920 ATTAACAGTCACATCGTATCAAGAAA 57.228 30.769 0.00 0.00 0.00 2.52
4476 5103 8.655970 CAATTAACAGTCACATCGTATCAAGAA 58.344 33.333 0.00 0.00 0.00 2.52
4477 5104 8.032451 TCAATTAACAGTCACATCGTATCAAGA 58.968 33.333 0.00 0.00 0.00 3.02
4837 5464 1.398071 GCTACGACAACAAAACTCGGC 60.398 52.381 0.00 0.00 0.00 5.54
4860 5487 3.543680 ACAATTATGCCACTCGCTAGT 57.456 42.857 0.00 0.00 38.78 2.57
5237 5864 3.689161 TCATAATTTGTTGGCTCGTCTGG 59.311 43.478 0.00 0.00 0.00 3.86
5347 5974 2.264005 TGCGGTGTTGTCCAAGTTAT 57.736 45.000 0.00 0.00 0.00 1.89
5365 5992 5.456497 CCAAATCTTTATGTGCAGCGTAATG 59.544 40.000 0.00 0.00 0.00 1.90
5369 5997 2.819608 ACCAAATCTTTATGTGCAGCGT 59.180 40.909 0.00 0.00 0.00 5.07
5388 6016 4.081697 ACAGCCATGCCAAATAAAGTTACC 60.082 41.667 0.00 0.00 0.00 2.85
5395 6023 7.594351 TCATTTATACAGCCATGCCAAATAA 57.406 32.000 0.00 0.00 0.00 1.40
5488 6157 0.860533 CTTTTGTGGTGCCAATTGCG 59.139 50.000 0.00 0.00 45.60 4.85
5507 6176 4.806640 TTCAAGGAAAAATCTCATGGCC 57.193 40.909 0.00 0.00 0.00 5.36
5550 6219 3.506810 CGCAGAAACACAGGTTTTTCAA 58.493 40.909 12.12 0.00 46.84 2.69
5560 6229 1.451207 ACAGTGCCGCAGAAACACA 60.451 52.632 0.00 0.00 36.76 3.72
5568 6237 4.393155 CTAGCCCACAGTGCCGCA 62.393 66.667 12.08 0.00 0.00 5.69
5580 6249 1.134995 GGCAAAACATTCTGGCTAGCC 60.135 52.381 27.71 27.71 35.35 3.93
5709 6378 2.287644 GCATGCACGCAGTTGTATGATA 59.712 45.455 14.21 0.00 41.61 2.15
5738 6413 5.306532 TCTAGTCTGGTATTGACACGTTC 57.693 43.478 0.00 0.00 36.94 3.95
5739 6414 5.243283 ACTTCTAGTCTGGTATTGACACGTT 59.757 40.000 0.00 0.00 36.94 3.99
5744 6419 7.339976 ACCTTCTACTTCTAGTCTGGTATTGAC 59.660 40.741 0.00 0.00 34.88 3.18
5811 6486 5.192327 AGGCATTCATTTATACAGCTTGC 57.808 39.130 0.00 0.00 0.00 4.01
5840 6515 1.982612 GTTTTCGATCAGCAAAGGGC 58.017 50.000 0.00 0.00 45.30 5.19
5897 6572 6.211384 CAGGGGAAGGTAGTGAATTGATTTTT 59.789 38.462 0.00 0.00 0.00 1.94
5899 6574 5.264395 CAGGGGAAGGTAGTGAATTGATTT 58.736 41.667 0.00 0.00 0.00 2.17
5904 6579 1.992557 TGCAGGGGAAGGTAGTGAATT 59.007 47.619 0.00 0.00 0.00 2.17
5918 6593 4.814294 GCCGTACCGACTGCAGGG 62.814 72.222 19.93 13.15 35.96 4.45
5923 6598 0.179200 GCATTTTGCCGTACCGACTG 60.179 55.000 0.00 0.00 37.42 3.51
5925 6600 4.757554 GCATTTTGCCGTACCGAC 57.242 55.556 0.00 0.00 37.42 4.79
5934 6609 5.237779 CCAAGGAAATATCATGGCATTTTGC 59.762 40.000 0.00 1.21 44.08 3.68
5958 6633 5.850128 CAGCAGAGCGCATAATAAAAAGATC 59.150 40.000 11.47 0.00 46.13 2.75
5966 6641 3.665745 TCATCAGCAGAGCGCATAATA 57.334 42.857 11.47 0.00 46.13 0.98
5967 6642 2.538512 TCATCAGCAGAGCGCATAAT 57.461 45.000 11.47 0.00 46.13 1.28
5968 6643 2.314323 TTCATCAGCAGAGCGCATAA 57.686 45.000 11.47 0.00 46.13 1.90
5969 6644 2.314323 TTTCATCAGCAGAGCGCATA 57.686 45.000 11.47 0.00 46.13 3.14
5971 6646 1.069022 GTTTTTCATCAGCAGAGCGCA 60.069 47.619 11.47 0.00 46.13 6.09
5972 6647 1.069022 TGTTTTTCATCAGCAGAGCGC 60.069 47.619 0.00 0.00 42.91 5.92
5973 6648 2.413765 CCTGTTTTTCATCAGCAGAGCG 60.414 50.000 0.00 0.00 0.00 5.03
5989 6664 0.036875 GGCTAGCTGGAACACCTGTT 59.963 55.000 15.72 0.00 41.64 3.16
5990 6665 0.838122 AGGCTAGCTGGAACACCTGT 60.838 55.000 15.72 0.00 28.20 4.00
5999 6674 3.005155 GGCAAAATATTCAGGCTAGCTGG 59.995 47.826 15.72 7.26 0.00 4.85
6005 6680 3.105959 ACAGGGCAAAATATTCAGGCT 57.894 42.857 11.65 0.00 0.00 4.58
6045 6720 0.710567 GTCGTCGTCATGCAAGAGTG 59.289 55.000 0.00 0.00 0.00 3.51
6046 6721 0.729478 CGTCGTCGTCATGCAAGAGT 60.729 55.000 0.00 0.00 0.00 3.24
6049 6724 3.071459 GCCGTCGTCGTCATGCAAG 62.071 63.158 0.71 0.00 35.01 4.01
6050 6725 3.109547 GCCGTCGTCGTCATGCAA 61.110 61.111 0.71 0.00 35.01 4.08
6052 6727 1.966493 AATTGCCGTCGTCGTCATGC 61.966 55.000 0.71 0.00 35.01 4.06
6053 6728 0.442310 AAATTGCCGTCGTCGTCATG 59.558 50.000 0.71 0.00 35.01 3.07
6054 6729 0.442310 CAAATTGCCGTCGTCGTCAT 59.558 50.000 0.71 0.00 35.01 3.06
6055 6730 0.876777 ACAAATTGCCGTCGTCGTCA 60.877 50.000 0.71 0.00 35.01 4.35
6056 6731 0.233848 AACAAATTGCCGTCGTCGTC 59.766 50.000 0.71 0.00 35.01 4.20
6057 6732 0.041663 CAACAAATTGCCGTCGTCGT 60.042 50.000 0.71 0.00 35.01 4.34
6058 6733 0.724453 CCAACAAATTGCCGTCGTCG 60.724 55.000 0.00 0.00 34.17 5.12
6062 6737 3.363341 TTTCTCCAACAAATTGCCGTC 57.637 42.857 0.00 0.00 34.17 4.79
6064 6739 3.911868 TCATTTCTCCAACAAATTGCCG 58.088 40.909 0.00 0.00 34.17 5.69
6066 6741 7.385752 TCTTGATTCATTTCTCCAACAAATTGC 59.614 33.333 0.00 0.00 34.17 3.56
6080 6755 4.156008 GCCAGTAACCGTCTTGATTCATTT 59.844 41.667 0.00 0.00 0.00 2.32
6092 6767 8.818860 TGATTAATATAATAGGCCAGTAACCGT 58.181 33.333 5.01 0.00 0.00 4.83
6093 6768 9.661563 TTGATTAATATAATAGGCCAGTAACCG 57.338 33.333 5.01 0.00 0.00 4.44
6098 6773 9.338968 TCTCCTTGATTAATATAATAGGCCAGT 57.661 33.333 5.01 0.00 0.00 4.00
6099 6774 9.829507 CTCTCCTTGATTAATATAATAGGCCAG 57.170 37.037 5.01 0.00 0.00 4.85
6100 6775 9.560860 TCTCTCCTTGATTAATATAATAGGCCA 57.439 33.333 5.01 0.00 0.00 5.36
6114 6789 9.930158 ACTAGTAACTCTATTCTCTCCTTGATT 57.070 33.333 0.00 0.00 0.00 2.57
6115 6790 9.930158 AACTAGTAACTCTATTCTCTCCTTGAT 57.070 33.333 0.00 0.00 0.00 2.57
6116 6791 9.756571 AAACTAGTAACTCTATTCTCTCCTTGA 57.243 33.333 0.00 0.00 0.00 3.02
6117 6792 9.796120 CAAACTAGTAACTCTATTCTCTCCTTG 57.204 37.037 0.00 0.00 0.00 3.61
6118 6793 9.536510 ACAAACTAGTAACTCTATTCTCTCCTT 57.463 33.333 0.00 0.00 0.00 3.36
6119 6794 9.536510 AACAAACTAGTAACTCTATTCTCTCCT 57.463 33.333 0.00 0.00 0.00 3.69
6134 6809 9.526713 TGTGTCGTATTGTAAAACAAACTAGTA 57.473 29.630 0.00 0.00 41.96 1.82
6135 6810 8.422973 TGTGTCGTATTGTAAAACAAACTAGT 57.577 30.769 0.00 0.00 41.96 2.57
6136 6811 9.313323 CATGTGTCGTATTGTAAAACAAACTAG 57.687 33.333 0.00 0.00 41.96 2.57
6137 6812 8.283992 CCATGTGTCGTATTGTAAAACAAACTA 58.716 33.333 0.00 0.00 41.96 2.24
6138 6813 7.012515 TCCATGTGTCGTATTGTAAAACAAACT 59.987 33.333 0.00 0.00 41.96 2.66
6139 6814 7.133513 TCCATGTGTCGTATTGTAAAACAAAC 58.866 34.615 0.00 0.00 41.96 2.93
6140 6815 7.260558 TCCATGTGTCGTATTGTAAAACAAA 57.739 32.000 0.00 0.00 41.96 2.83
6141 6816 6.862711 TCCATGTGTCGTATTGTAAAACAA 57.137 33.333 0.00 0.00 42.95 2.83
6142 6817 6.128145 CCATCCATGTGTCGTATTGTAAAACA 60.128 38.462 0.00 0.00 0.00 2.83
6143 6818 6.255215 CCATCCATGTGTCGTATTGTAAAAC 58.745 40.000 0.00 0.00 0.00 2.43
6144 6819 5.355630 CCCATCCATGTGTCGTATTGTAAAA 59.644 40.000 0.00 0.00 0.00 1.52
6145 6820 4.878971 CCCATCCATGTGTCGTATTGTAAA 59.121 41.667 0.00 0.00 0.00 2.01
6146 6821 4.447290 CCCATCCATGTGTCGTATTGTAA 58.553 43.478 0.00 0.00 0.00 2.41
6147 6822 3.742954 GCCCATCCATGTGTCGTATTGTA 60.743 47.826 0.00 0.00 0.00 2.41
6148 6823 2.917933 CCCATCCATGTGTCGTATTGT 58.082 47.619 0.00 0.00 0.00 2.71
6149 6824 1.603802 GCCCATCCATGTGTCGTATTG 59.396 52.381 0.00 0.00 0.00 1.90
6150 6825 1.476833 GGCCCATCCATGTGTCGTATT 60.477 52.381 0.00 0.00 34.01 1.89
6151 6826 0.108585 GGCCCATCCATGTGTCGTAT 59.891 55.000 0.00 0.00 34.01 3.06
6152 6827 1.268283 TGGCCCATCCATGTGTCGTA 61.268 55.000 0.00 0.00 40.72 3.43
6153 6828 2.272146 GGCCCATCCATGTGTCGT 59.728 61.111 0.00 0.00 34.01 4.34
6154 6829 1.820906 CTGGCCCATCCATGTGTCG 60.821 63.158 0.00 0.00 45.50 4.35
6155 6830 1.033746 CACTGGCCCATCCATGTGTC 61.034 60.000 0.00 0.00 45.50 3.67
6156 6831 1.000521 CACTGGCCCATCCATGTGT 60.001 57.895 0.00 0.00 45.50 3.72
6157 6832 1.000521 ACACTGGCCCATCCATGTG 60.001 57.895 0.00 0.00 45.50 3.21
6158 6833 1.304282 GACACTGGCCCATCCATGT 59.696 57.895 0.00 0.00 45.50 3.21
6159 6834 0.323633 TTGACACTGGCCCATCCATG 60.324 55.000 0.00 0.00 45.50 3.66
6160 6835 0.632835 ATTGACACTGGCCCATCCAT 59.367 50.000 0.00 0.00 45.50 3.41
6161 6836 0.409092 AATTGACACTGGCCCATCCA 59.591 50.000 0.00 0.00 44.18 3.41
6162 6837 1.205417 CAAATTGACACTGGCCCATCC 59.795 52.381 0.00 0.00 0.00 3.51
6163 6838 1.404583 GCAAATTGACACTGGCCCATC 60.405 52.381 0.00 0.00 0.00 3.51
6164 6839 0.609662 GCAAATTGACACTGGCCCAT 59.390 50.000 0.00 0.00 0.00 4.00
6165 6840 0.469705 AGCAAATTGACACTGGCCCA 60.470 50.000 0.00 0.00 0.00 5.36
6166 6841 0.037975 CAGCAAATTGACACTGGCCC 60.038 55.000 0.00 0.00 0.00 5.80
6167 6842 0.037975 CCAGCAAATTGACACTGGCC 60.038 55.000 0.00 0.00 42.96 5.36
6168 6843 3.502237 CCAGCAAATTGACACTGGC 57.498 52.632 0.00 0.00 42.96 4.85
6170 6845 4.156664 CTTCTCCAGCAAATTGACACTG 57.843 45.455 0.00 0.00 0.00 3.66
6182 6857 1.374252 TTCCGTTCGCTTCTCCAGC 60.374 57.895 0.00 0.00 46.31 4.85
6183 6858 0.319555 TGTTCCGTTCGCTTCTCCAG 60.320 55.000 0.00 0.00 0.00 3.86
6184 6859 0.319555 CTGTTCCGTTCGCTTCTCCA 60.320 55.000 0.00 0.00 0.00 3.86
6185 6860 1.627550 GCTGTTCCGTTCGCTTCTCC 61.628 60.000 0.00 0.00 0.00 3.71
6186 6861 1.782181 GCTGTTCCGTTCGCTTCTC 59.218 57.895 0.00 0.00 0.00 2.87
6187 6862 2.022129 CGCTGTTCCGTTCGCTTCT 61.022 57.895 0.00 0.00 0.00 2.85
6188 6863 2.308039 ACGCTGTTCCGTTCGCTTC 61.308 57.895 0.00 0.00 38.47 3.86
6189 6864 2.279918 ACGCTGTTCCGTTCGCTT 60.280 55.556 0.00 0.00 38.47 4.68
6195 6870 1.647084 GCAAGAAACGCTGTTCCGT 59.353 52.632 0.00 0.00 44.41 4.69
6196 6871 1.438710 CGCAAGAAACGCTGTTCCG 60.439 57.895 0.00 0.00 43.02 4.30
6197 6872 0.384353 GACGCAAGAAACGCTGTTCC 60.384 55.000 0.00 0.00 43.62 3.62
6198 6873 0.303493 TGACGCAAGAAACGCTGTTC 59.697 50.000 0.00 0.00 43.62 3.18
6199 6874 0.730265 TTGACGCAAGAAACGCTGTT 59.270 45.000 0.00 0.00 43.62 3.16
6200 6875 0.027586 GTTGACGCAAGAAACGCTGT 59.972 50.000 0.00 0.00 43.62 4.40
6201 6876 0.304705 AGTTGACGCAAGAAACGCTG 59.695 50.000 0.00 0.00 40.58 5.18
6202 6877 0.304705 CAGTTGACGCAAGAAACGCT 59.695 50.000 0.00 0.00 40.58 5.07
6203 6878 1.262166 GCAGTTGACGCAAGAAACGC 61.262 55.000 0.00 0.00 40.58 4.84
6204 6879 0.027455 TGCAGTTGACGCAAGAAACG 59.973 50.000 0.00 0.00 40.58 3.60
6205 6880 2.187351 TTGCAGTTGACGCAAGAAAC 57.813 45.000 8.53 0.00 44.13 2.78
6211 6886 1.068402 CATTCCATTGCAGTTGACGCA 60.068 47.619 0.59 0.00 37.68 5.24
6212 6887 1.621107 CATTCCATTGCAGTTGACGC 58.379 50.000 0.59 0.00 0.00 5.19
6213 6888 1.621107 GCATTCCATTGCAGTTGACG 58.379 50.000 0.59 0.00 42.31 4.35
6214 6889 1.273048 TGGCATTCCATTGCAGTTGAC 59.727 47.619 0.59 0.00 44.59 3.18
6215 6890 1.546923 CTGGCATTCCATTGCAGTTGA 59.453 47.619 0.00 0.00 44.59 3.18
6216 6891 1.546923 TCTGGCATTCCATTGCAGTTG 59.453 47.619 0.00 0.00 44.59 3.16
6217 6892 1.547372 GTCTGGCATTCCATTGCAGTT 59.453 47.619 0.00 0.00 44.59 3.16
6218 6893 1.180029 GTCTGGCATTCCATTGCAGT 58.820 50.000 0.00 0.00 44.59 4.40
6219 6894 0.458669 GGTCTGGCATTCCATTGCAG 59.541 55.000 0.00 0.00 44.59 4.41
6220 6895 0.040058 AGGTCTGGCATTCCATTGCA 59.960 50.000 10.02 0.00 44.59 4.08
6221 6896 0.458669 CAGGTCTGGCATTCCATTGC 59.541 55.000 10.02 0.00 42.51 3.56
6222 6897 0.458669 GCAGGTCTGGCATTCCATTG 59.541 55.000 10.02 3.02 42.51 2.82
6223 6898 0.040058 TGCAGGTCTGGCATTCCATT 59.960 50.000 10.02 0.00 42.51 3.16
6224 6899 0.040058 TTGCAGGTCTGGCATTCCAT 59.960 50.000 10.02 0.00 42.51 3.41
6225 6900 0.895100 GTTGCAGGTCTGGCATTCCA 60.895 55.000 10.02 0.00 41.58 3.53
6226 6901 0.895100 TGTTGCAGGTCTGGCATTCC 60.895 55.000 0.00 0.00 41.58 3.01
6227 6902 0.961019 TTGTTGCAGGTCTGGCATTC 59.039 50.000 0.00 0.00 41.58 2.67
6228 6903 1.547372 GATTGTTGCAGGTCTGGCATT 59.453 47.619 0.00 0.00 41.58 3.56
6229 6904 1.180029 GATTGTTGCAGGTCTGGCAT 58.820 50.000 0.00 0.00 41.58 4.40
6230 6905 0.895100 GGATTGTTGCAGGTCTGGCA 60.895 55.000 0.00 0.00 40.00 4.92
6231 6906 0.610232 AGGATTGTTGCAGGTCTGGC 60.610 55.000 0.00 0.00 0.00 4.85
6232 6907 1.915141 AAGGATTGTTGCAGGTCTGG 58.085 50.000 0.00 0.00 0.00 3.86
6233 6908 2.886523 TGAAAGGATTGTTGCAGGTCTG 59.113 45.455 0.00 0.00 0.00 3.51
6234 6909 3.228188 TGAAAGGATTGTTGCAGGTCT 57.772 42.857 0.00 0.00 0.00 3.85
6235 6910 3.256631 ACATGAAAGGATTGTTGCAGGTC 59.743 43.478 0.00 0.00 0.00 3.85
6236 6911 3.233507 ACATGAAAGGATTGTTGCAGGT 58.766 40.909 0.00 0.00 0.00 4.00
6237 6912 3.947910 ACATGAAAGGATTGTTGCAGG 57.052 42.857 0.00 0.00 0.00 4.85
6238 6913 4.083324 ACGTACATGAAAGGATTGTTGCAG 60.083 41.667 0.00 0.00 0.00 4.41
6239 6914 3.818210 ACGTACATGAAAGGATTGTTGCA 59.182 39.130 0.00 0.00 0.00 4.08
6240 6915 4.419522 ACGTACATGAAAGGATTGTTGC 57.580 40.909 0.00 0.00 0.00 4.17
6241 6916 6.147164 ACACTACGTACATGAAAGGATTGTTG 59.853 38.462 0.00 0.00 0.00 3.33
6242 6917 6.228258 ACACTACGTACATGAAAGGATTGTT 58.772 36.000 0.00 0.00 0.00 2.83
6243 6918 5.790593 ACACTACGTACATGAAAGGATTGT 58.209 37.500 0.00 0.00 0.00 2.71
6244 6919 5.867174 TGACACTACGTACATGAAAGGATTG 59.133 40.000 0.00 0.00 0.00 2.67
6245 6920 6.032956 TGACACTACGTACATGAAAGGATT 57.967 37.500 0.00 0.00 0.00 3.01
6246 6921 5.654603 TGACACTACGTACATGAAAGGAT 57.345 39.130 0.00 0.00 0.00 3.24
6247 6922 5.010314 AGTTGACACTACGTACATGAAAGGA 59.990 40.000 0.00 0.00 0.00 3.36
6248 6923 5.227908 AGTTGACACTACGTACATGAAAGG 58.772 41.667 0.00 0.00 0.00 3.11
6249 6924 6.764877 AAGTTGACACTACGTACATGAAAG 57.235 37.500 0.00 0.00 30.68 2.62
6250 6925 6.757478 TCAAAGTTGACACTACGTACATGAAA 59.243 34.615 0.00 1.66 30.68 2.69
6251 6926 6.274579 TCAAAGTTGACACTACGTACATGAA 58.725 36.000 0.00 0.00 30.68 2.57
6252 6927 5.834169 TCAAAGTTGACACTACGTACATGA 58.166 37.500 0.00 0.00 30.68 3.07
6253 6928 6.200286 ACTTCAAAGTTGACACTACGTACATG 59.800 38.462 0.00 0.00 35.21 3.21
6254 6929 6.278363 ACTTCAAAGTTGACACTACGTACAT 58.722 36.000 0.00 0.00 35.21 2.29
6255 6930 5.653507 ACTTCAAAGTTGACACTACGTACA 58.346 37.500 0.00 0.00 35.21 2.90
6256 6931 6.129247 GCTACTTCAAAGTTGACACTACGTAC 60.129 42.308 8.25 0.00 40.37 3.67
6257 6932 5.916883 GCTACTTCAAAGTTGACACTACGTA 59.083 40.000 8.25 0.00 40.37 3.57
6258 6933 4.743644 GCTACTTCAAAGTTGACACTACGT 59.256 41.667 8.25 0.00 40.37 3.57
6259 6934 4.743151 TGCTACTTCAAAGTTGACACTACG 59.257 41.667 8.25 0.00 40.37 3.51
6260 6935 5.753921 ACTGCTACTTCAAAGTTGACACTAC 59.246 40.000 8.25 0.00 40.37 2.73
6261 6936 5.914033 ACTGCTACTTCAAAGTTGACACTA 58.086 37.500 8.25 0.00 40.37 2.74
6262 6937 4.770795 ACTGCTACTTCAAAGTTGACACT 58.229 39.130 8.25 0.00 40.37 3.55
6263 6938 5.753921 ACTACTGCTACTTCAAAGTTGACAC 59.246 40.000 8.25 0.00 40.37 3.67
6264 6939 5.914033 ACTACTGCTACTTCAAAGTTGACA 58.086 37.500 8.25 5.37 40.37 3.58
6265 6940 6.292919 CCAACTACTGCTACTTCAAAGTTGAC 60.293 42.308 12.51 1.69 39.68 3.18
6266 6941 5.758296 CCAACTACTGCTACTTCAAAGTTGA 59.242 40.000 12.51 0.00 39.68 3.18
6267 6942 5.049405 CCCAACTACTGCTACTTCAAAGTTG 60.049 44.000 0.00 0.00 40.37 3.16
6268 6943 5.063880 CCCAACTACTGCTACTTCAAAGTT 58.936 41.667 0.00 0.00 40.37 2.66
6269 6944 4.347000 TCCCAACTACTGCTACTTCAAAGT 59.653 41.667 0.46 0.46 42.91 2.66
6270 6945 4.691216 GTCCCAACTACTGCTACTTCAAAG 59.309 45.833 0.00 0.00 0.00 2.77
6271 6946 4.638304 GTCCCAACTACTGCTACTTCAAA 58.362 43.478 0.00 0.00 0.00 2.69
6272 6947 3.305813 CGTCCCAACTACTGCTACTTCAA 60.306 47.826 0.00 0.00 0.00 2.69
6273 6948 2.230508 CGTCCCAACTACTGCTACTTCA 59.769 50.000 0.00 0.00 0.00 3.02
6274 6949 2.490903 TCGTCCCAACTACTGCTACTTC 59.509 50.000 0.00 0.00 0.00 3.01
6275 6950 2.522185 TCGTCCCAACTACTGCTACTT 58.478 47.619 0.00 0.00 0.00 2.24
6276 6951 2.211250 TCGTCCCAACTACTGCTACT 57.789 50.000 0.00 0.00 0.00 2.57
6277 6952 3.119245 TGAATCGTCCCAACTACTGCTAC 60.119 47.826 0.00 0.00 0.00 3.58
6278 6953 3.093814 TGAATCGTCCCAACTACTGCTA 58.906 45.455 0.00 0.00 0.00 3.49
6279 6954 1.899814 TGAATCGTCCCAACTACTGCT 59.100 47.619 0.00 0.00 0.00 4.24
6280 6955 2.000447 GTGAATCGTCCCAACTACTGC 59.000 52.381 0.00 0.00 0.00 4.40
6281 6956 2.094906 TCGTGAATCGTCCCAACTACTG 60.095 50.000 0.00 0.00 40.80 2.74
6282 6957 2.094854 GTCGTGAATCGTCCCAACTACT 60.095 50.000 0.00 0.00 40.80 2.57
6283 6958 2.257034 GTCGTGAATCGTCCCAACTAC 58.743 52.381 0.00 0.00 40.80 2.73
6284 6959 1.135603 CGTCGTGAATCGTCCCAACTA 60.136 52.381 0.00 0.00 40.80 2.24
6285 6960 0.388134 CGTCGTGAATCGTCCCAACT 60.388 55.000 0.00 0.00 40.80 3.16
6286 6961 1.952266 GCGTCGTGAATCGTCCCAAC 61.952 60.000 0.00 0.00 40.80 3.77
6287 6962 1.735198 GCGTCGTGAATCGTCCCAA 60.735 57.895 0.00 0.00 40.80 4.12
6288 6963 2.126228 GCGTCGTGAATCGTCCCA 60.126 61.111 0.00 0.00 40.80 4.37
6289 6964 3.245315 CGCGTCGTGAATCGTCCC 61.245 66.667 0.00 0.00 40.80 4.46
6290 6965 2.931713 ATCCGCGTCGTGAATCGTCC 62.932 60.000 7.51 0.00 40.80 4.79
6291 6966 1.138047 AATCCGCGTCGTGAATCGTC 61.138 55.000 7.51 0.00 40.80 4.20
6292 6967 1.138047 GAATCCGCGTCGTGAATCGT 61.138 55.000 7.51 0.00 40.80 3.73
6293 6968 1.137459 TGAATCCGCGTCGTGAATCG 61.137 55.000 7.51 0.00 41.41 3.34
6294 6969 1.190323 GATGAATCCGCGTCGTGAATC 59.810 52.381 7.51 0.00 0.00 2.52
6295 6970 1.209128 GATGAATCCGCGTCGTGAAT 58.791 50.000 7.51 0.00 0.00 2.57
6296 6971 0.109039 TGATGAATCCGCGTCGTGAA 60.109 50.000 7.51 0.00 0.00 3.18
6297 6972 0.800683 GTGATGAATCCGCGTCGTGA 60.801 55.000 7.51 0.00 0.00 4.35
6298 6973 1.631072 GTGATGAATCCGCGTCGTG 59.369 57.895 4.92 0.00 0.00 4.35
6299 6974 1.518572 GGTGATGAATCCGCGTCGT 60.519 57.895 4.92 0.00 0.00 4.34
6300 6975 1.482621 CTGGTGATGAATCCGCGTCG 61.483 60.000 4.92 0.00 0.00 5.12
6301 6976 0.179111 TCTGGTGATGAATCCGCGTC 60.179 55.000 4.92 0.00 0.00 5.19
6302 6977 0.249120 TTCTGGTGATGAATCCGCGT 59.751 50.000 4.92 0.00 0.00 6.01
6303 6978 1.368641 TTTCTGGTGATGAATCCGCG 58.631 50.000 0.00 0.00 0.00 6.46
6304 6979 2.478539 GCTTTTCTGGTGATGAATCCGC 60.479 50.000 0.00 0.00 0.00 5.54
6305 6980 2.223112 CGCTTTTCTGGTGATGAATCCG 60.223 50.000 0.00 0.00 0.00 4.18
6306 6981 2.478539 GCGCTTTTCTGGTGATGAATCC 60.479 50.000 0.00 0.00 0.00 3.01
6307 6982 2.478539 GGCGCTTTTCTGGTGATGAATC 60.479 50.000 7.64 0.00 0.00 2.52
6308 6983 1.474077 GGCGCTTTTCTGGTGATGAAT 59.526 47.619 7.64 0.00 0.00 2.57
6309 6984 0.881118 GGCGCTTTTCTGGTGATGAA 59.119 50.000 7.64 0.00 0.00 2.57
6310 6985 0.960364 GGGCGCTTTTCTGGTGATGA 60.960 55.000 7.64 0.00 0.00 2.92
6311 6986 0.962356 AGGGCGCTTTTCTGGTGATG 60.962 55.000 7.64 0.00 0.00 3.07
6312 6987 0.678048 GAGGGCGCTTTTCTGGTGAT 60.678 55.000 7.64 0.00 0.00 3.06
6313 6988 1.302511 GAGGGCGCTTTTCTGGTGA 60.303 57.895 7.64 0.00 0.00 4.02
6314 6989 2.680913 CGAGGGCGCTTTTCTGGTG 61.681 63.158 7.64 0.00 0.00 4.17
6315 6990 2.358737 CGAGGGCGCTTTTCTGGT 60.359 61.111 7.64 0.00 0.00 4.00
6316 6991 2.047274 TCGAGGGCGCTTTTCTGG 60.047 61.111 7.64 1.93 37.46 3.86
6317 6992 2.391389 GGTCGAGGGCGCTTTTCTG 61.391 63.158 7.64 0.30 37.46 3.02
6318 6993 2.047179 GGTCGAGGGCGCTTTTCT 60.047 61.111 7.64 0.00 37.46 2.52
6319 6994 3.488090 CGGTCGAGGGCGCTTTTC 61.488 66.667 7.64 1.52 37.46 2.29
6320 6995 2.999739 TTTCGGTCGAGGGCGCTTTT 63.000 55.000 7.64 0.00 37.46 2.27
6321 6996 3.524648 TTTCGGTCGAGGGCGCTTT 62.525 57.895 7.64 0.00 37.46 3.51
6322 6997 3.934391 CTTTCGGTCGAGGGCGCTT 62.934 63.158 7.64 0.00 37.46 4.68
6323 6998 4.436998 CTTTCGGTCGAGGGCGCT 62.437 66.667 7.64 1.38 37.46 5.92
6356 7031 3.222855 CAGGTTTTGTGCCCGGCA 61.223 61.111 8.43 8.43 35.60 5.69
6357 7032 4.662961 GCAGGTTTTGTGCCCGGC 62.663 66.667 1.04 1.04 34.67 6.13
6358 7033 3.222855 TGCAGGTTTTGTGCCCGG 61.223 61.111 0.00 0.00 40.43 5.73
6359 7034 2.027460 GTGCAGGTTTTGTGCCCG 59.973 61.111 0.00 0.00 40.43 6.13
6360 7035 2.027460 CGTGCAGGTTTTGTGCCC 59.973 61.111 0.00 0.00 40.43 5.36
6361 7036 2.658268 GCGTGCAGGTTTTGTGCC 60.658 61.111 8.40 0.00 40.43 5.01
6362 7037 1.658409 GAGCGTGCAGGTTTTGTGC 60.658 57.895 8.40 0.00 41.59 4.57
6363 7038 1.369209 CGAGCGTGCAGGTTTTGTG 60.369 57.895 8.40 0.00 0.00 3.33
6364 7039 1.817941 ACGAGCGTGCAGGTTTTGT 60.818 52.632 8.40 4.43 0.00 2.83
6365 7040 1.369209 CACGAGCGTGCAGGTTTTG 60.369 57.895 10.25 3.83 39.39 2.44
6366 7041 3.022287 CACGAGCGTGCAGGTTTT 58.978 55.556 10.25 0.00 39.39 2.43
6375 7050 0.249699 TTGGATTGTCACACGAGCGT 60.250 50.000 0.00 0.00 0.00 5.07
6376 7051 0.439985 CTTGGATTGTCACACGAGCG 59.560 55.000 0.00 0.00 0.00 5.03
6377 7052 1.795768 TCTTGGATTGTCACACGAGC 58.204 50.000 0.00 0.00 0.00 5.03
6378 7053 3.125829 CCATTCTTGGATTGTCACACGAG 59.874 47.826 0.00 0.00 46.92 4.18
6379 7054 3.073678 CCATTCTTGGATTGTCACACGA 58.926 45.455 0.00 0.00 46.92 4.35
6380 7055 2.813754 ACCATTCTTGGATTGTCACACG 59.186 45.455 0.00 0.00 46.92 4.49
6381 7056 3.120199 CGACCATTCTTGGATTGTCACAC 60.120 47.826 0.00 0.00 46.92 3.82
6382 7057 3.073678 CGACCATTCTTGGATTGTCACA 58.926 45.455 0.00 0.00 46.92 3.58
6383 7058 3.074412 ACGACCATTCTTGGATTGTCAC 58.926 45.455 0.00 0.00 46.92 3.67
6384 7059 3.334691 GACGACCATTCTTGGATTGTCA 58.665 45.455 0.00 0.00 46.92 3.58
6385 7060 2.678336 GGACGACCATTCTTGGATTGTC 59.322 50.000 0.00 3.81 46.92 3.18
6386 7061 2.305927 AGGACGACCATTCTTGGATTGT 59.694 45.455 6.71 0.00 46.92 2.71
6387 7062 2.679837 CAGGACGACCATTCTTGGATTG 59.320 50.000 6.71 0.00 46.92 2.67
6388 7063 2.941415 GCAGGACGACCATTCTTGGATT 60.941 50.000 6.71 0.00 46.92 3.01
6389 7064 1.407437 GCAGGACGACCATTCTTGGAT 60.407 52.381 6.71 0.00 46.92 3.41
6390 7065 0.036388 GCAGGACGACCATTCTTGGA 60.036 55.000 6.71 0.00 46.92 3.53
6403 7078 0.960286 GGAGGGAGTATACGCAGGAC 59.040 60.000 8.93 0.00 0.00 3.85
6404 7079 0.536687 CGGAGGGAGTATACGCAGGA 60.537 60.000 8.93 0.00 0.00 3.86
6405 7080 0.822532 ACGGAGGGAGTATACGCAGG 60.823 60.000 8.93 0.00 0.00 4.85
6406 7081 1.001597 GAACGGAGGGAGTATACGCAG 60.002 57.143 8.93 0.00 0.00 5.18
6407 7082 1.027357 GAACGGAGGGAGTATACGCA 58.973 55.000 8.93 0.00 0.00 5.24
6408 7083 1.316651 AGAACGGAGGGAGTATACGC 58.683 55.000 0.00 0.00 0.00 4.42
6409 7084 2.947652 TCAAGAACGGAGGGAGTATACG 59.052 50.000 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.