Multiple sequence alignment - TraesCS3A01G358000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G358000 chr3A 100.000 5578 0 0 1 5578 606428078 606433655 0.000000e+00 10301.0
1 TraesCS3A01G358000 chr3A 89.062 64 7 0 2972 3035 606430791 606430854 4.630000e-11 80.5
2 TraesCS3A01G358000 chr3A 89.062 64 7 0 2714 2777 606431049 606431112 4.630000e-11 80.5
3 TraesCS3A01G358000 chr3D 93.952 2811 104 25 2524 5294 462862648 462859864 0.000000e+00 4189.0
4 TraesCS3A01G358000 chr3D 95.012 2426 96 10 2524 4938 463184515 463186926 0.000000e+00 3786.0
5 TraesCS3A01G358000 chr3D 93.036 2197 97 23 355 2522 462864850 462862681 0.000000e+00 3158.0
6 TraesCS3A01G358000 chr3D 93.421 1900 90 14 355 2238 463182174 463184054 0.000000e+00 2784.0
7 TraesCS3A01G358000 chr3D 94.444 234 13 0 2237 2470 463184105 463184338 1.480000e-95 361.0
8 TraesCS3A01G358000 chr3D 94.690 113 4 2 29 141 463079532 463079422 2.070000e-39 174.0
9 TraesCS3A01G358000 chr3D 95.238 84 4 0 4937 5020 463187203 463187286 3.510000e-27 134.0
10 TraesCS3A01G358000 chr3D 100.000 54 0 0 2469 2522 463184429 463184482 3.560000e-17 100.0
11 TraesCS3A01G358000 chr3D 93.750 64 4 0 2972 3035 463184705 463184768 4.600000e-16 97.1
12 TraesCS3A01G358000 chr3D 91.803 61 5 0 2975 3035 462862458 462862398 9.960000e-13 86.1
13 TraesCS3A01G358000 chr3D 90.909 55 3 2 2873 2927 462862228 462862176 7.750000e-09 73.1
14 TraesCS3A01G358000 chr3D 97.619 42 1 0 314 355 462864912 462864871 7.750000e-09 73.1
15 TraesCS3A01G358000 chr3D 91.837 49 4 0 275 323 462866089 462866041 1.000000e-07 69.4
16 TraesCS3A01G358000 chr3B 94.006 2736 114 16 2524 5248 616260197 616262893 0.000000e+00 4098.0
17 TraesCS3A01G358000 chr3B 92.460 1817 110 9 716 2522 616258365 616260164 0.000000e+00 2571.0
18 TraesCS3A01G358000 chr3B 90.294 1360 101 13 3800 5155 615778253 615776921 0.000000e+00 1751.0
19 TraesCS3A01G358000 chr3B 87.059 680 47 21 161 818 616257704 616258364 0.000000e+00 730.0
20 TraesCS3A01G358000 chr3B 92.188 64 5 0 2972 3035 616260384 616260447 2.140000e-14 91.6
21 TraesCS3A01G358000 chr3B 95.745 47 0 2 5326 5372 13507462 13507418 2.160000e-09 75.0
22 TraesCS3A01G358000 chr3B 100.000 31 0 0 325 355 616257835 616257865 2.170000e-04 58.4
23 TraesCS3A01G358000 chr3B 96.875 32 1 0 5264 5295 616262935 616262966 3.000000e-03 54.7
24 TraesCS3A01G358000 chr7A 80.216 2133 338 60 3047 5149 30660223 30658145 0.000000e+00 1524.0
25 TraesCS3A01G358000 chr7A 81.429 1190 195 22 1099 2279 30663838 30662666 0.000000e+00 950.0
26 TraesCS3A01G358000 chr7A 76.642 411 50 26 354 740 30664512 30664124 9.540000e-43 185.0
27 TraesCS3A01G358000 chr4A 79.523 2139 350 62 3047 5149 698133315 698135401 0.000000e+00 1443.0
28 TraesCS3A01G358000 chr4A 79.065 2140 361 56 3040 5149 698906160 698908242 0.000000e+00 1389.0
29 TraesCS3A01G358000 chr4A 82.049 1064 169 19 1223 2279 698130487 698131535 0.000000e+00 887.0
30 TraesCS3A01G358000 chr4A 81.660 747 126 9 1099 1842 698903375 698904113 1.330000e-170 610.0
31 TraesCS3A01G358000 chr7D 79.901 1622 269 37 3321 4928 30270251 30268673 0.000000e+00 1136.0
32 TraesCS3A01G358000 chr7D 87.931 116 13 1 5379 5493 460653968 460654083 9.750000e-28 135.0
33 TraesCS3A01G358000 chr2A 85.320 906 114 12 1327 2222 31015498 31016394 0.000000e+00 918.0
34 TraesCS3A01G358000 chr2A 82.150 958 149 12 3999 4948 30935098 30936041 0.000000e+00 802.0
35 TraesCS3A01G358000 chrUn 86.915 726 93 1 1171 1894 381001297 381000572 0.000000e+00 813.0
36 TraesCS3A01G358000 chrUn 86.795 727 94 1 1170 1894 17017763 17017037 0.000000e+00 809.0
37 TraesCS3A01G358000 chr2D 84.615 182 26 2 4328 4507 29071718 29071899 4.440000e-41 180.0
38 TraesCS3A01G358000 chr6D 73.896 498 104 23 3216 3700 468089171 468088687 5.740000e-40 176.0
39 TraesCS3A01G358000 chr1B 95.745 47 0 2 5326 5372 551819870 551819914 2.160000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G358000 chr3A 606428078 606433655 5577 False 3487.333333 10301 92.708000 1 5578 3 chr3A.!!$F1 5577
1 TraesCS3A01G358000 chr3D 462859864 462866089 6225 True 1274.783333 4189 93.192667 275 5294 6 chr3D.!!$R2 5019
2 TraesCS3A01G358000 chr3D 463182174 463187286 5112 False 1210.350000 3786 95.310833 355 5020 6 chr3D.!!$F1 4665
3 TraesCS3A01G358000 chr3B 615776921 615778253 1332 True 1751.000000 1751 90.294000 3800 5155 1 chr3B.!!$R2 1355
4 TraesCS3A01G358000 chr3B 616257704 616262966 5262 False 1267.283333 4098 93.764667 161 5295 6 chr3B.!!$F1 5134
5 TraesCS3A01G358000 chr7A 30658145 30664512 6367 True 886.333333 1524 79.429000 354 5149 3 chr7A.!!$R1 4795
6 TraesCS3A01G358000 chr4A 698130487 698135401 4914 False 1165.000000 1443 80.786000 1223 5149 2 chr4A.!!$F1 3926
7 TraesCS3A01G358000 chr4A 698903375 698908242 4867 False 999.500000 1389 80.362500 1099 5149 2 chr4A.!!$F2 4050
8 TraesCS3A01G358000 chr7D 30268673 30270251 1578 True 1136.000000 1136 79.901000 3321 4928 1 chr7D.!!$R1 1607
9 TraesCS3A01G358000 chr2A 31015498 31016394 896 False 918.000000 918 85.320000 1327 2222 1 chr2A.!!$F2 895
10 TraesCS3A01G358000 chr2A 30935098 30936041 943 False 802.000000 802 82.150000 3999 4948 1 chr2A.!!$F1 949
11 TraesCS3A01G358000 chrUn 381000572 381001297 725 True 813.000000 813 86.915000 1171 1894 1 chrUn.!!$R2 723
12 TraesCS3A01G358000 chrUn 17017037 17017763 726 True 809.000000 809 86.795000 1170 1894 1 chrUn.!!$R1 724

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
147 148 0.178846 TCCCATCCCCAAGTCCAAGA 60.179 55.000 0.00 0.0 0.00 3.02 F
263 267 0.316196 GCGTTGCATCTTCGGCATAC 60.316 55.000 0.00 0.0 41.58 2.39 F
846 2207 1.765314 GCTAGGAATGGAGAAGCCTGA 59.235 52.381 0.00 0.0 37.63 3.86 F
1952 3333 0.613260 GGCACAGGTACCAGACATCA 59.387 55.000 15.94 0.0 0.00 3.07 F
3065 6849 0.032952 TAAGTACCCATGGATCGCGC 59.967 55.000 15.22 0.0 0.00 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1018 2380 0.102844 TTTTCCTTCGTGTCGTCGGT 59.897 50.000 0.00 0.0 0.00 4.69 R
1183 2560 1.687682 GCTCATGACCTCTGGGAGAGA 60.688 57.143 2.01 0.0 45.07 3.10 R
2443 3912 3.081061 CCCAACTAGCACAGCATACAAA 58.919 45.455 0.00 0.0 0.00 2.83 R
3477 7263 1.271871 CCCATACTGTCCTGCAAACCA 60.272 52.381 0.00 0.0 0.00 3.67 R
4591 8384 1.734465 GTCATGAGTGCTGGTAGTTGC 59.266 52.381 0.00 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.568623 ACTGAACGGCTTCCTCAAAT 57.431 45.000 0.00 0.00 0.00 2.32
20 21 3.695830 ACTGAACGGCTTCCTCAAATA 57.304 42.857 0.00 0.00 0.00 1.40
21 22 4.015872 ACTGAACGGCTTCCTCAAATAA 57.984 40.909 0.00 0.00 0.00 1.40
22 23 4.003648 ACTGAACGGCTTCCTCAAATAAG 58.996 43.478 0.00 0.00 0.00 1.73
23 24 4.253685 CTGAACGGCTTCCTCAAATAAGA 58.746 43.478 0.00 0.00 0.00 2.10
24 25 4.253685 TGAACGGCTTCCTCAAATAAGAG 58.746 43.478 0.00 0.00 35.39 2.85
37 38 7.392494 CTCAAATAAGAGGGAAGTTTTACCC 57.608 40.000 0.00 0.00 45.88 3.69
38 39 6.250711 TCAAATAAGAGGGAAGTTTTACCCC 58.749 40.000 0.00 0.00 46.64 4.95
39 40 4.875578 ATAAGAGGGAAGTTTTACCCCC 57.124 45.455 0.00 0.00 46.64 5.40
53 54 2.354729 CCCCCGAGGCATTGTTCA 59.645 61.111 0.00 0.00 0.00 3.18
54 55 2.046285 CCCCCGAGGCATTGTTCAC 61.046 63.158 0.00 0.00 0.00 3.18
55 56 2.046285 CCCCGAGGCATTGTTCACC 61.046 63.158 0.00 0.00 0.00 4.02
56 57 2.046285 CCCGAGGCATTGTTCACCC 61.046 63.158 0.00 0.00 0.00 4.61
57 58 1.303236 CCGAGGCATTGTTCACCCA 60.303 57.895 0.00 0.00 0.00 4.51
58 59 1.586154 CCGAGGCATTGTTCACCCAC 61.586 60.000 0.00 0.00 0.00 4.61
59 60 1.586154 CGAGGCATTGTTCACCCACC 61.586 60.000 0.00 0.00 0.00 4.61
60 61 1.228862 AGGCATTGTTCACCCACCC 60.229 57.895 0.00 0.00 0.00 4.61
61 62 2.635443 GGCATTGTTCACCCACCCG 61.635 63.158 0.00 0.00 0.00 5.28
62 63 1.602323 GCATTGTTCACCCACCCGA 60.602 57.895 0.00 0.00 0.00 5.14
63 64 1.175983 GCATTGTTCACCCACCCGAA 61.176 55.000 0.00 0.00 0.00 4.30
64 65 0.596082 CATTGTTCACCCACCCGAAC 59.404 55.000 0.00 0.00 41.53 3.95
65 66 3.321445 TGTTCACCCACCCGAACA 58.679 55.556 1.03 1.03 46.91 3.18
66 67 1.153127 TGTTCACCCACCCGAACAC 60.153 57.895 1.03 0.00 44.88 3.32
67 68 1.147600 GTTCACCCACCCGAACACT 59.852 57.895 0.00 0.00 40.97 3.55
68 69 0.393820 GTTCACCCACCCGAACACTA 59.606 55.000 0.00 0.00 40.97 2.74
69 70 0.393820 TTCACCCACCCGAACACTAC 59.606 55.000 0.00 0.00 0.00 2.73
70 71 0.470456 TCACCCACCCGAACACTACT 60.470 55.000 0.00 0.00 0.00 2.57
71 72 1.203038 TCACCCACCCGAACACTACTA 60.203 52.381 0.00 0.00 0.00 1.82
72 73 1.619827 CACCCACCCGAACACTACTAA 59.380 52.381 0.00 0.00 0.00 2.24
73 74 2.235402 CACCCACCCGAACACTACTAAT 59.765 50.000 0.00 0.00 0.00 1.73
74 75 2.498885 ACCCACCCGAACACTACTAATC 59.501 50.000 0.00 0.00 0.00 1.75
75 76 2.159000 CCCACCCGAACACTACTAATCC 60.159 54.545 0.00 0.00 0.00 3.01
76 77 2.159000 CCACCCGAACACTACTAATCCC 60.159 54.545 0.00 0.00 0.00 3.85
77 78 2.113807 ACCCGAACACTACTAATCCCC 58.886 52.381 0.00 0.00 0.00 4.81
78 79 1.415289 CCCGAACACTACTAATCCCCC 59.585 57.143 0.00 0.00 0.00 5.40
79 80 2.112998 CCGAACACTACTAATCCCCCA 58.887 52.381 0.00 0.00 0.00 4.96
80 81 2.159000 CCGAACACTACTAATCCCCCAC 60.159 54.545 0.00 0.00 0.00 4.61
81 82 2.764572 CGAACACTACTAATCCCCCACT 59.235 50.000 0.00 0.00 0.00 4.00
82 83 3.197116 CGAACACTACTAATCCCCCACTT 59.803 47.826 0.00 0.00 0.00 3.16
83 84 4.403432 CGAACACTACTAATCCCCCACTTA 59.597 45.833 0.00 0.00 0.00 2.24
84 85 5.070047 CGAACACTACTAATCCCCCACTTAT 59.930 44.000 0.00 0.00 0.00 1.73
85 86 6.496144 AACACTACTAATCCCCCACTTATC 57.504 41.667 0.00 0.00 0.00 1.75
86 87 4.906060 ACACTACTAATCCCCCACTTATCC 59.094 45.833 0.00 0.00 0.00 2.59
87 88 4.286291 CACTACTAATCCCCCACTTATCCC 59.714 50.000 0.00 0.00 0.00 3.85
88 89 3.745678 ACTAATCCCCCACTTATCCCT 57.254 47.619 0.00 0.00 0.00 4.20
89 90 4.035967 ACTAATCCCCCACTTATCCCTT 57.964 45.455 0.00 0.00 0.00 3.95
90 91 3.981375 ACTAATCCCCCACTTATCCCTTC 59.019 47.826 0.00 0.00 0.00 3.46
91 92 1.834540 ATCCCCCACTTATCCCTTCC 58.165 55.000 0.00 0.00 0.00 3.46
92 93 0.328158 TCCCCCACTTATCCCTTCCC 60.328 60.000 0.00 0.00 0.00 3.97
93 94 1.361176 CCCCCACTTATCCCTTCCCC 61.361 65.000 0.00 0.00 0.00 4.81
94 95 1.361176 CCCCACTTATCCCTTCCCCC 61.361 65.000 0.00 0.00 0.00 5.40
95 96 0.626277 CCCACTTATCCCTTCCCCCA 60.626 60.000 0.00 0.00 0.00 4.96
96 97 0.551396 CCACTTATCCCTTCCCCCAC 59.449 60.000 0.00 0.00 0.00 4.61
97 98 1.295020 CACTTATCCCTTCCCCCACA 58.705 55.000 0.00 0.00 0.00 4.17
98 99 1.638589 CACTTATCCCTTCCCCCACAA 59.361 52.381 0.00 0.00 0.00 3.33
99 100 2.244769 CACTTATCCCTTCCCCCACAAT 59.755 50.000 0.00 0.00 0.00 2.71
100 101 2.514160 ACTTATCCCTTCCCCCACAATC 59.486 50.000 0.00 0.00 0.00 2.67
101 102 1.529744 TATCCCTTCCCCCACAATCC 58.470 55.000 0.00 0.00 0.00 3.01
102 103 0.254299 ATCCCTTCCCCCACAATCCT 60.254 55.000 0.00 0.00 0.00 3.24
103 104 0.479589 TCCCTTCCCCCACAATCCTT 60.480 55.000 0.00 0.00 0.00 3.36
104 105 0.324645 CCCTTCCCCCACAATCCTTG 60.325 60.000 0.00 0.00 0.00 3.61
105 106 0.409484 CCTTCCCCCACAATCCTTGT 59.591 55.000 0.00 0.00 46.75 3.16
106 107 1.638589 CCTTCCCCCACAATCCTTGTA 59.361 52.381 0.00 0.00 43.23 2.41
107 108 2.042433 CCTTCCCCCACAATCCTTGTAA 59.958 50.000 0.00 0.00 43.23 2.41
108 109 2.891191 TCCCCCACAATCCTTGTAAC 57.109 50.000 0.00 0.00 43.23 2.50
109 110 2.354328 TCCCCCACAATCCTTGTAACT 58.646 47.619 0.00 0.00 43.23 2.24
110 111 2.041081 TCCCCCACAATCCTTGTAACTG 59.959 50.000 0.00 0.00 43.23 3.16
111 112 2.225017 CCCCCACAATCCTTGTAACTGT 60.225 50.000 0.00 0.00 43.23 3.55
112 113 2.819608 CCCCACAATCCTTGTAACTGTG 59.180 50.000 0.00 0.00 43.23 3.66
113 114 3.486383 CCCACAATCCTTGTAACTGTGT 58.514 45.455 0.00 0.00 43.23 3.72
114 115 4.505918 CCCCACAATCCTTGTAACTGTGTA 60.506 45.833 0.00 0.00 43.23 2.90
115 116 4.454504 CCCACAATCCTTGTAACTGTGTAC 59.545 45.833 0.00 0.00 43.23 2.90
116 117 4.454504 CCACAATCCTTGTAACTGTGTACC 59.545 45.833 0.00 0.00 43.23 3.34
117 118 5.060506 CACAATCCTTGTAACTGTGTACCA 58.939 41.667 0.00 0.00 43.23 3.25
118 119 5.705441 CACAATCCTTGTAACTGTGTACCAT 59.295 40.000 0.00 0.00 43.23 3.55
119 120 6.206634 CACAATCCTTGTAACTGTGTACCATT 59.793 38.462 0.00 0.00 43.23 3.16
120 121 6.430000 ACAATCCTTGTAACTGTGTACCATTC 59.570 38.462 0.00 0.00 43.27 2.67
121 122 4.901868 TCCTTGTAACTGTGTACCATTCC 58.098 43.478 0.00 0.00 0.00 3.01
122 123 3.682858 CCTTGTAACTGTGTACCATTCCG 59.317 47.826 0.00 0.00 0.00 4.30
123 124 4.312443 CTTGTAACTGTGTACCATTCCGT 58.688 43.478 0.00 0.00 0.00 4.69
124 125 4.339872 TGTAACTGTGTACCATTCCGTT 57.660 40.909 0.00 0.00 0.00 4.44
125 126 5.465532 TGTAACTGTGTACCATTCCGTTA 57.534 39.130 0.00 0.00 0.00 3.18
126 127 5.851720 TGTAACTGTGTACCATTCCGTTAA 58.148 37.500 0.00 0.00 0.00 2.01
127 128 6.286758 TGTAACTGTGTACCATTCCGTTAAA 58.713 36.000 0.00 0.00 0.00 1.52
128 129 6.935771 TGTAACTGTGTACCATTCCGTTAAAT 59.064 34.615 0.00 0.00 0.00 1.40
129 130 6.490566 AACTGTGTACCATTCCGTTAAATC 57.509 37.500 0.00 0.00 0.00 2.17
130 131 4.939439 ACTGTGTACCATTCCGTTAAATCC 59.061 41.667 0.00 0.00 0.00 3.01
131 132 4.263435 TGTGTACCATTCCGTTAAATCCC 58.737 43.478 0.00 0.00 0.00 3.85
132 133 4.263374 TGTGTACCATTCCGTTAAATCCCA 60.263 41.667 0.00 0.00 0.00 4.37
133 134 4.885325 GTGTACCATTCCGTTAAATCCCAT 59.115 41.667 0.00 0.00 0.00 4.00
134 135 5.008316 GTGTACCATTCCGTTAAATCCCATC 59.992 44.000 0.00 0.00 0.00 3.51
135 136 3.562182 ACCATTCCGTTAAATCCCATCC 58.438 45.455 0.00 0.00 0.00 3.51
136 137 2.890945 CCATTCCGTTAAATCCCATCCC 59.109 50.000 0.00 0.00 0.00 3.85
137 138 2.740506 TTCCGTTAAATCCCATCCCC 57.259 50.000 0.00 0.00 0.00 4.81
138 139 1.597681 TCCGTTAAATCCCATCCCCA 58.402 50.000 0.00 0.00 0.00 4.96
139 140 1.923850 TCCGTTAAATCCCATCCCCAA 59.076 47.619 0.00 0.00 0.00 4.12
140 141 2.092103 TCCGTTAAATCCCATCCCCAAG 60.092 50.000 0.00 0.00 0.00 3.61
141 142 2.357777 CCGTTAAATCCCATCCCCAAGT 60.358 50.000 0.00 0.00 0.00 3.16
142 143 2.949644 CGTTAAATCCCATCCCCAAGTC 59.050 50.000 0.00 0.00 0.00 3.01
143 144 3.296854 GTTAAATCCCATCCCCAAGTCC 58.703 50.000 0.00 0.00 0.00 3.85
144 145 1.392407 AAATCCCATCCCCAAGTCCA 58.608 50.000 0.00 0.00 0.00 4.02
145 146 1.392407 AATCCCATCCCCAAGTCCAA 58.608 50.000 0.00 0.00 0.00 3.53
146 147 0.929244 ATCCCATCCCCAAGTCCAAG 59.071 55.000 0.00 0.00 0.00 3.61
147 148 0.178846 TCCCATCCCCAAGTCCAAGA 60.179 55.000 0.00 0.00 0.00 3.02
148 149 0.704076 CCCATCCCCAAGTCCAAGAA 59.296 55.000 0.00 0.00 0.00 2.52
149 150 1.077005 CCCATCCCCAAGTCCAAGAAA 59.923 52.381 0.00 0.00 0.00 2.52
150 151 2.171003 CCATCCCCAAGTCCAAGAAAC 58.829 52.381 0.00 0.00 0.00 2.78
151 152 2.490718 CCATCCCCAAGTCCAAGAAACA 60.491 50.000 0.00 0.00 0.00 2.83
152 153 3.230134 CATCCCCAAGTCCAAGAAACAA 58.770 45.455 0.00 0.00 0.00 2.83
153 154 2.944129 TCCCCAAGTCCAAGAAACAAG 58.056 47.619 0.00 0.00 0.00 3.16
154 155 2.243736 TCCCCAAGTCCAAGAAACAAGT 59.756 45.455 0.00 0.00 0.00 3.16
155 156 3.460340 TCCCCAAGTCCAAGAAACAAGTA 59.540 43.478 0.00 0.00 0.00 2.24
156 157 4.079672 TCCCCAAGTCCAAGAAACAAGTAA 60.080 41.667 0.00 0.00 0.00 2.24
157 158 4.037565 CCCCAAGTCCAAGAAACAAGTAAC 59.962 45.833 0.00 0.00 0.00 2.50
158 159 4.642885 CCCAAGTCCAAGAAACAAGTAACA 59.357 41.667 0.00 0.00 0.00 2.41
159 160 5.221048 CCCAAGTCCAAGAAACAAGTAACAG 60.221 44.000 0.00 0.00 0.00 3.16
172 173 3.423539 AGTAACAGCACATCCACACAT 57.576 42.857 0.00 0.00 0.00 3.21
173 174 3.076621 AGTAACAGCACATCCACACATG 58.923 45.455 0.00 0.00 0.00 3.21
181 182 5.574055 CAGCACATCCACACATGAAATTTAC 59.426 40.000 0.00 0.00 0.00 2.01
182 183 5.477984 AGCACATCCACACATGAAATTTACT 59.522 36.000 0.00 0.00 0.00 2.24
183 184 5.574055 GCACATCCACACATGAAATTTACTG 59.426 40.000 0.00 0.00 0.00 2.74
184 185 6.680810 CACATCCACACATGAAATTTACTGT 58.319 36.000 0.00 0.00 0.00 3.55
185 186 7.574779 GCACATCCACACATGAAATTTACTGTA 60.575 37.037 0.00 0.00 0.00 2.74
187 188 8.461222 ACATCCACACATGAAATTTACTGTATG 58.539 33.333 0.00 4.87 0.00 2.39
188 189 7.994425 TCCACACATGAAATTTACTGTATGT 57.006 32.000 0.00 5.10 0.00 2.29
189 190 7.815641 TCCACACATGAAATTTACTGTATGTG 58.184 34.615 19.45 19.45 46.45 3.21
190 191 6.527722 CCACACATGAAATTTACTGTATGTGC 59.472 38.462 20.23 0.00 45.51 4.57
191 192 7.307694 CACACATGAAATTTACTGTATGTGCT 58.692 34.615 20.23 11.83 45.51 4.40
192 193 8.450180 CACACATGAAATTTACTGTATGTGCTA 58.550 33.333 20.23 0.00 45.51 3.49
193 194 8.668353 ACACATGAAATTTACTGTATGTGCTAG 58.332 33.333 20.23 0.00 45.51 3.42
194 195 8.668353 CACATGAAATTTACTGTATGTGCTAGT 58.332 33.333 0.00 0.00 38.97 2.57
195 196 8.668353 ACATGAAATTTACTGTATGTGCTAGTG 58.332 33.333 0.00 0.00 0.00 2.74
196 197 7.072177 TGAAATTTACTGTATGTGCTAGTGC 57.928 36.000 0.00 0.00 40.20 4.40
227 228 4.213564 AGCAAAGGAGAGTTCAGTATGG 57.786 45.455 0.00 0.00 36.16 2.74
256 260 2.939103 ACAGGAATAGCGTTGCATCTTC 59.061 45.455 0.00 0.00 0.00 2.87
257 261 2.033407 CAGGAATAGCGTTGCATCTTCG 60.033 50.000 0.00 0.00 0.00 3.79
263 267 0.316196 GCGTTGCATCTTCGGCATAC 60.316 55.000 0.00 0.00 41.58 2.39
305 309 7.780008 TTCACTTGAGACAAATAAACTTCGA 57.220 32.000 0.00 0.00 0.00 3.71
310 314 3.939592 GAGACAAATAAACTTCGAGGGGG 59.060 47.826 0.00 0.00 0.00 5.40
318 1460 2.926242 TTCGAGGGGGTGGTCCAC 60.926 66.667 14.13 14.13 39.99 4.02
378 1544 3.842923 CCGCTCCTCACGCCTCAT 61.843 66.667 0.00 0.00 0.00 2.90
526 1736 2.826428 TGGCAGCGAATCTGATAAGTC 58.174 47.619 0.00 0.00 45.72 3.01
529 1739 2.398498 CAGCGAATCTGATAAGTCCCG 58.602 52.381 0.00 0.00 45.72 5.14
564 1774 3.428746 TGCTCTCTACAGATTCGAAGC 57.571 47.619 4.98 4.98 0.00 3.86
601 1811 6.407475 ACTTTGTTGAATTGTTTTGACTGC 57.593 33.333 0.00 0.00 0.00 4.40
632 1844 2.275318 CAATCTCGCTGTCTTCCCTTC 58.725 52.381 0.00 0.00 0.00 3.46
689 1901 6.538742 ACCATATAATCACCAAGAAACGACAG 59.461 38.462 0.00 0.00 0.00 3.51
842 2203 3.274095 ACAAGCTAGGAATGGAGAAGC 57.726 47.619 0.00 0.00 0.00 3.86
844 2205 2.172293 CAAGCTAGGAATGGAGAAGCCT 59.828 50.000 0.00 0.00 37.63 4.58
845 2206 1.767681 AGCTAGGAATGGAGAAGCCTG 59.232 52.381 0.00 0.00 37.63 4.85
846 2207 1.765314 GCTAGGAATGGAGAAGCCTGA 59.235 52.381 0.00 0.00 37.63 3.86
847 2208 2.484594 GCTAGGAATGGAGAAGCCTGAC 60.485 54.545 0.00 0.00 37.63 3.51
848 2209 1.963985 AGGAATGGAGAAGCCTGACT 58.036 50.000 0.00 0.00 37.63 3.41
888 2250 5.404366 GAGACGACTCTCTACATAGCTGTAG 59.596 48.000 7.68 6.76 42.82 2.74
909 2271 5.838531 AGAACTAGTGAAGAGTATTCCCG 57.161 43.478 0.00 0.00 0.00 5.14
1183 2560 1.071471 CAGGCTTCCACGGTGAAGT 59.929 57.895 10.28 0.00 42.98 3.01
1912 3292 2.262211 GGAAAAATGGACAGAATGCGC 58.738 47.619 0.00 0.00 42.53 6.09
1952 3333 0.613260 GGCACAGGTACCAGACATCA 59.387 55.000 15.94 0.00 0.00 3.07
1957 3338 2.168521 ACAGGTACCAGACATCATTCCG 59.831 50.000 15.94 0.00 0.00 4.30
1959 3340 2.431057 AGGTACCAGACATCATTCCGTC 59.569 50.000 15.94 0.00 0.00 4.79
2139 3530 6.206243 AGCAACATCTAGCATATGCCTTTTAG 59.794 38.462 23.96 17.71 43.38 1.85
2156 3547 6.669278 CCTTTTAGTTTCAGCTAACCAGTTC 58.331 40.000 0.00 0.00 31.43 3.01
2289 3732 2.618709 GTGCATTCCACCTAGCCATAAC 59.381 50.000 0.00 0.00 38.55 1.89
2359 3807 8.539770 TTCATGAGAAACAGTGAGTAATTCTC 57.460 34.615 0.00 8.43 41.39 2.87
2443 3912 8.732746 AGTAAATGGCTTATTACTCGATGTTT 57.267 30.769 0.00 0.00 37.73 2.83
2522 4085 5.481122 TGCAGTATGTAGTTACCCAAGTGTA 59.519 40.000 0.00 0.00 39.31 2.90
2590 4185 6.640518 TCCGCTCCCAATGTATTCTATAATC 58.359 40.000 0.00 0.00 0.00 1.75
2664 4432 1.769026 TAAACCAGCACCAGTTTGCA 58.231 45.000 0.00 0.00 45.62 4.08
2665 4433 0.461135 AAACCAGCACCAGTTTGCAG 59.539 50.000 0.00 0.00 45.62 4.41
3065 6849 0.032952 TAAGTACCCATGGATCGCGC 59.967 55.000 15.22 0.00 0.00 6.86
3143 6929 8.613060 TTTTGATATTTGTATTTTGCTTGCCA 57.387 26.923 0.00 0.00 0.00 4.92
3178 6964 6.173339 AGTGTGTCATTTCCATAGTAGTTGG 58.827 40.000 0.00 0.00 35.45 3.77
3186 6972 5.934402 TTCCATAGTAGTTGGTCTTCTCC 57.066 43.478 0.00 0.00 35.64 3.71
3202 6988 6.418946 GTCTTCTCCCCTTGATGAACTTAAT 58.581 40.000 0.00 0.00 0.00 1.40
3453 7239 6.147328 GTGAAAGTGGGACAGTAACTATGTTC 59.853 42.308 0.00 0.00 43.84 3.18
3477 7263 1.291588 CAAGTCTCCGAGCAGTGCT 59.708 57.895 19.86 19.86 43.88 4.40
3566 7352 3.251729 GTCAGTTCTGCTTGCAGAAATCA 59.748 43.478 31.38 19.81 42.12 2.57
3796 7585 9.339850 TGTACTAAATTGTACTTTTAAGCACCA 57.660 29.630 7.40 0.00 42.22 4.17
3805 7594 6.482641 TGTACTTTTAAGCACCACGTTTGATA 59.517 34.615 0.00 0.00 0.00 2.15
3860 7649 5.186797 TGGCTTCACCTTCTTTTCTTTTTCA 59.813 36.000 0.00 0.00 40.22 2.69
4200 7989 3.429410 CGTCTTGTCTGTGATGGCTATGA 60.429 47.826 0.00 0.00 0.00 2.15
4690 8495 5.406163 GGGGATTTGGGATTCAGGATTTAT 58.594 41.667 0.00 0.00 0.00 1.40
4779 8587 4.591998 ACCGTTTTGTTCAACAATTTGC 57.408 36.364 3.17 0.00 38.00 3.68
5020 9122 5.410067 TGCTTTGCTACCTTAATGATTTGC 58.590 37.500 0.00 0.00 0.00 3.68
5135 9239 8.734218 TTACACAATCCCGCTTTAATATTGTA 57.266 30.769 0.00 0.00 38.39 2.41
5291 9450 8.451748 CAAGTTATACTGCCCTCTTAAAAAGTC 58.548 37.037 0.00 0.00 0.00 3.01
5295 9454 3.394606 ACTGCCCTCTTAAAAAGTCAGGA 59.605 43.478 0.00 0.00 0.00 3.86
5296 9455 4.043435 ACTGCCCTCTTAAAAAGTCAGGAT 59.957 41.667 0.00 0.00 0.00 3.24
5297 9456 5.250774 ACTGCCCTCTTAAAAAGTCAGGATA 59.749 40.000 0.00 0.00 0.00 2.59
5298 9457 5.745227 TGCCCTCTTAAAAAGTCAGGATAG 58.255 41.667 0.00 0.00 0.00 2.08
5299 9458 5.126779 GCCCTCTTAAAAAGTCAGGATAGG 58.873 45.833 0.00 0.00 0.00 2.57
5300 9459 5.104485 GCCCTCTTAAAAAGTCAGGATAGGA 60.104 44.000 0.00 0.00 0.00 2.94
5301 9460 6.350103 CCCTCTTAAAAAGTCAGGATAGGAC 58.650 44.000 0.00 0.00 35.50 3.85
5311 9470 5.983540 AGTCAGGATAGGACTTGTCAATTC 58.016 41.667 3.08 0.00 42.77 2.17
5312 9471 5.723887 AGTCAGGATAGGACTTGTCAATTCT 59.276 40.000 3.08 0.00 42.77 2.40
5313 9472 6.214412 AGTCAGGATAGGACTTGTCAATTCTT 59.786 38.462 3.08 0.00 42.77 2.52
5314 9473 6.536941 GTCAGGATAGGACTTGTCAATTCTTC 59.463 42.308 3.08 0.00 32.54 2.87
5315 9474 5.819901 CAGGATAGGACTTGTCAATTCTTCC 59.180 44.000 3.08 7.20 0.00 3.46
5316 9475 4.811557 GGATAGGACTTGTCAATTCTTCCG 59.188 45.833 3.08 0.00 0.00 4.30
5317 9476 3.059352 AGGACTTGTCAATTCTTCCGG 57.941 47.619 0.00 0.00 0.00 5.14
5318 9477 1.468914 GGACTTGTCAATTCTTCCGGC 59.531 52.381 0.00 0.00 0.00 6.13
5319 9478 2.427506 GACTTGTCAATTCTTCCGGCT 58.572 47.619 0.00 0.00 0.00 5.52
5320 9479 2.814336 GACTTGTCAATTCTTCCGGCTT 59.186 45.455 0.00 0.00 0.00 4.35
5321 9480 3.222603 ACTTGTCAATTCTTCCGGCTTT 58.777 40.909 0.00 0.00 0.00 3.51
5322 9481 4.394729 ACTTGTCAATTCTTCCGGCTTTA 58.605 39.130 0.00 0.00 0.00 1.85
5323 9482 4.825085 ACTTGTCAATTCTTCCGGCTTTAA 59.175 37.500 0.00 0.00 0.00 1.52
5324 9483 5.300792 ACTTGTCAATTCTTCCGGCTTTAAA 59.699 36.000 0.00 0.00 0.00 1.52
5325 9484 5.116069 TGTCAATTCTTCCGGCTTTAAAC 57.884 39.130 0.00 0.00 0.00 2.01
5326 9485 4.580995 TGTCAATTCTTCCGGCTTTAAACA 59.419 37.500 0.00 0.00 0.00 2.83
5327 9486 4.915667 GTCAATTCTTCCGGCTTTAAACAC 59.084 41.667 0.00 0.00 0.00 3.32
5328 9487 4.825085 TCAATTCTTCCGGCTTTAAACACT 59.175 37.500 0.00 0.00 0.00 3.55
5329 9488 4.766404 ATTCTTCCGGCTTTAAACACTG 57.234 40.909 0.00 0.00 0.00 3.66
5330 9489 3.478857 TCTTCCGGCTTTAAACACTGA 57.521 42.857 0.00 0.00 0.00 3.41
5331 9490 3.811083 TCTTCCGGCTTTAAACACTGAA 58.189 40.909 0.00 0.00 0.00 3.02
5332 9491 3.562557 TCTTCCGGCTTTAAACACTGAAC 59.437 43.478 0.00 0.00 0.00 3.18
5333 9492 3.202829 TCCGGCTTTAAACACTGAACT 57.797 42.857 0.00 0.00 0.00 3.01
5334 9493 4.339872 TCCGGCTTTAAACACTGAACTA 57.660 40.909 0.00 0.00 0.00 2.24
5335 9494 4.312443 TCCGGCTTTAAACACTGAACTAG 58.688 43.478 0.00 0.00 0.00 2.57
5336 9495 3.120304 CCGGCTTTAAACACTGAACTAGC 60.120 47.826 0.00 0.00 0.00 3.42
5337 9496 3.120304 CGGCTTTAAACACTGAACTAGCC 60.120 47.826 0.00 0.00 42.63 3.93
5338 9497 3.818773 GGCTTTAAACACTGAACTAGCCA 59.181 43.478 0.00 0.00 44.80 4.75
5339 9498 4.277423 GGCTTTAAACACTGAACTAGCCAA 59.723 41.667 0.00 0.00 44.80 4.52
5340 9499 5.452777 GCTTTAAACACTGAACTAGCCAAG 58.547 41.667 0.00 0.00 0.00 3.61
5341 9500 5.562890 GCTTTAAACACTGAACTAGCCAAGG 60.563 44.000 0.00 0.00 0.00 3.61
5342 9501 3.577805 AAACACTGAACTAGCCAAGGT 57.422 42.857 0.00 0.00 0.00 3.50
5343 9502 3.577805 AACACTGAACTAGCCAAGGTT 57.422 42.857 0.00 0.00 0.00 3.50
5344 9503 3.577805 ACACTGAACTAGCCAAGGTTT 57.422 42.857 0.00 0.00 0.00 3.27
5345 9504 4.699925 ACACTGAACTAGCCAAGGTTTA 57.300 40.909 0.00 0.00 0.00 2.01
5346 9505 5.043737 ACACTGAACTAGCCAAGGTTTAA 57.956 39.130 0.00 0.00 0.00 1.52
5347 9506 4.820173 ACACTGAACTAGCCAAGGTTTAAC 59.180 41.667 0.00 0.00 0.00 2.01
5348 9507 4.819630 CACTGAACTAGCCAAGGTTTAACA 59.180 41.667 0.00 0.00 0.00 2.41
5349 9508 4.820173 ACTGAACTAGCCAAGGTTTAACAC 59.180 41.667 0.00 0.00 0.00 3.32
5350 9509 4.783055 TGAACTAGCCAAGGTTTAACACA 58.217 39.130 0.00 0.00 0.00 3.72
5351 9510 5.381757 TGAACTAGCCAAGGTTTAACACAT 58.618 37.500 0.00 0.00 0.00 3.21
5352 9511 5.472137 TGAACTAGCCAAGGTTTAACACATC 59.528 40.000 0.00 0.00 0.00 3.06
5353 9512 4.980573 ACTAGCCAAGGTTTAACACATCA 58.019 39.130 0.00 0.00 0.00 3.07
5354 9513 4.760204 ACTAGCCAAGGTTTAACACATCAC 59.240 41.667 0.00 0.00 0.00 3.06
5355 9514 3.561143 AGCCAAGGTTTAACACATCACA 58.439 40.909 0.00 0.00 0.00 3.58
5356 9515 3.317993 AGCCAAGGTTTAACACATCACAC 59.682 43.478 0.00 0.00 0.00 3.82
5357 9516 3.552068 GCCAAGGTTTAACACATCACACC 60.552 47.826 0.00 0.00 0.00 4.16
5358 9517 3.634448 CCAAGGTTTAACACATCACACCA 59.366 43.478 0.00 0.00 0.00 4.17
5359 9518 4.280677 CCAAGGTTTAACACATCACACCAT 59.719 41.667 0.00 0.00 0.00 3.55
5360 9519 5.460646 CAAGGTTTAACACATCACACCATC 58.539 41.667 0.00 0.00 0.00 3.51
5361 9520 4.985538 AGGTTTAACACATCACACCATCT 58.014 39.130 0.00 0.00 0.00 2.90
5362 9521 6.121776 AGGTTTAACACATCACACCATCTA 57.878 37.500 0.00 0.00 0.00 1.98
5363 9522 5.938125 AGGTTTAACACATCACACCATCTAC 59.062 40.000 0.00 0.00 0.00 2.59
5364 9523 5.938125 GGTTTAACACATCACACCATCTACT 59.062 40.000 0.00 0.00 0.00 2.57
5365 9524 7.038587 AGGTTTAACACATCACACCATCTACTA 60.039 37.037 0.00 0.00 0.00 1.82
5366 9525 7.604927 GGTTTAACACATCACACCATCTACTAA 59.395 37.037 0.00 0.00 0.00 2.24
5367 9526 9.162764 GTTTAACACATCACACCATCTACTAAT 57.837 33.333 0.00 0.00 0.00 1.73
5368 9527 8.942338 TTAACACATCACACCATCTACTAATC 57.058 34.615 0.00 0.00 0.00 1.75
5369 9528 6.798427 ACACATCACACCATCTACTAATCT 57.202 37.500 0.00 0.00 0.00 2.40
5370 9529 6.810911 ACACATCACACCATCTACTAATCTC 58.189 40.000 0.00 0.00 0.00 2.75
5371 9530 6.609212 ACACATCACACCATCTACTAATCTCT 59.391 38.462 0.00 0.00 0.00 3.10
5372 9531 7.124901 ACACATCACACCATCTACTAATCTCTT 59.875 37.037 0.00 0.00 0.00 2.85
5373 9532 7.984050 CACATCACACCATCTACTAATCTCTTT 59.016 37.037 0.00 0.00 0.00 2.52
5374 9533 9.201989 ACATCACACCATCTACTAATCTCTTTA 57.798 33.333 0.00 0.00 0.00 1.85
5377 9536 8.144478 TCACACCATCTACTAATCTCTTTATGC 58.856 37.037 0.00 0.00 0.00 3.14
5378 9537 7.115520 CACACCATCTACTAATCTCTTTATGCG 59.884 40.741 0.00 0.00 0.00 4.73
5379 9538 6.090088 CACCATCTACTAATCTCTTTATGCGC 59.910 42.308 0.00 0.00 0.00 6.09
5380 9539 6.015010 ACCATCTACTAATCTCTTTATGCGCT 60.015 38.462 9.73 0.00 0.00 5.92
5381 9540 6.309980 CCATCTACTAATCTCTTTATGCGCTG 59.690 42.308 9.73 0.00 0.00 5.18
5382 9541 5.773575 TCTACTAATCTCTTTATGCGCTGG 58.226 41.667 9.73 0.00 0.00 4.85
5383 9542 4.672587 ACTAATCTCTTTATGCGCTGGA 57.327 40.909 9.73 0.00 0.00 3.86
5384 9543 5.023533 ACTAATCTCTTTATGCGCTGGAA 57.976 39.130 9.73 0.00 0.00 3.53
5385 9544 5.053145 ACTAATCTCTTTATGCGCTGGAAG 58.947 41.667 9.73 9.79 0.00 3.46
5386 9545 2.315925 TCTCTTTATGCGCTGGAAGG 57.684 50.000 9.73 0.36 0.00 3.46
5396 9555 0.598065 CGCTGGAAGGGTGAAAAAGG 59.402 55.000 0.00 0.00 42.74 3.11
5397 9556 0.318441 GCTGGAAGGGTGAAAAAGGC 59.682 55.000 0.00 0.00 0.00 4.35
5398 9557 0.969149 CTGGAAGGGTGAAAAAGGCC 59.031 55.000 0.00 0.00 0.00 5.19
5399 9558 0.471022 TGGAAGGGTGAAAAAGGCCC 60.471 55.000 0.00 0.00 42.64 5.80
5400 9559 1.192146 GGAAGGGTGAAAAAGGCCCC 61.192 60.000 0.00 0.00 43.32 5.80
5401 9560 3.701991 AGGGTGAAAAAGGCCCCT 58.298 55.556 0.00 0.00 43.32 4.79
5402 9561 0.471780 AAGGGTGAAAAAGGCCCCTG 60.472 55.000 0.00 0.00 46.95 4.45
5403 9562 2.583441 GGGTGAAAAAGGCCCCTGC 61.583 63.158 0.00 0.00 36.46 4.85
5404 9563 1.533994 GGTGAAAAAGGCCCCTGCT 60.534 57.895 0.00 0.00 37.74 4.24
5405 9564 0.251608 GGTGAAAAAGGCCCCTGCTA 60.252 55.000 0.00 0.00 37.74 3.49
5406 9565 0.888619 GTGAAAAAGGCCCCTGCTAC 59.111 55.000 0.00 0.00 37.74 3.58
5407 9566 0.251608 TGAAAAAGGCCCCTGCTACC 60.252 55.000 0.00 0.00 37.74 3.18
5408 9567 0.039764 GAAAAAGGCCCCTGCTACCT 59.960 55.000 0.00 0.00 37.74 3.08
5409 9568 0.251787 AAAAAGGCCCCTGCTACCTG 60.252 55.000 0.00 0.00 37.74 4.00
5410 9569 2.788210 AAAAGGCCCCTGCTACCTGC 62.788 60.000 0.00 0.00 43.25 4.85
5411 9570 4.748798 AGGCCCCTGCTACCTGCT 62.749 66.667 0.00 0.00 43.37 4.24
5412 9571 4.182433 GGCCCCTGCTACCTGCTC 62.182 72.222 0.00 0.00 43.37 4.26
5413 9572 3.402681 GCCCCTGCTACCTGCTCA 61.403 66.667 0.00 0.00 43.37 4.26
5414 9573 2.971598 GCCCCTGCTACCTGCTCAA 61.972 63.158 0.00 0.00 43.37 3.02
5415 9574 1.222936 CCCCTGCTACCTGCTCAAG 59.777 63.158 0.00 0.00 43.37 3.02
5416 9575 1.451028 CCCTGCTACCTGCTCAAGC 60.451 63.158 0.00 0.00 43.37 4.01
5417 9576 1.601171 CCTGCTACCTGCTCAAGCT 59.399 57.895 3.32 0.00 43.37 3.74
5418 9577 0.743701 CCTGCTACCTGCTCAAGCTG 60.744 60.000 3.32 2.72 43.37 4.24
5419 9578 1.367599 CTGCTACCTGCTCAAGCTGC 61.368 60.000 3.32 0.00 43.37 5.25
5420 9579 1.078567 GCTACCTGCTCAAGCTGCT 60.079 57.895 0.00 0.00 42.66 4.24
5421 9580 1.367599 GCTACCTGCTCAAGCTGCTG 61.368 60.000 1.35 0.00 42.66 4.41
5422 9581 0.036577 CTACCTGCTCAAGCTGCTGT 60.037 55.000 1.35 0.00 42.66 4.40
5423 9582 0.036952 TACCTGCTCAAGCTGCTGTC 60.037 55.000 1.35 0.00 42.66 3.51
5424 9583 2.039405 CCTGCTCAAGCTGCTGTCC 61.039 63.158 1.35 0.00 42.66 4.02
5425 9584 2.033141 TGCTCAAGCTGCTGTCCC 59.967 61.111 1.35 0.00 42.66 4.46
5426 9585 2.350514 GCTCAAGCTGCTGTCCCT 59.649 61.111 1.35 0.00 38.21 4.20
5427 9586 1.303155 GCTCAAGCTGCTGTCCCTT 60.303 57.895 1.35 0.00 38.21 3.95
5428 9587 0.036010 GCTCAAGCTGCTGTCCCTTA 60.036 55.000 1.35 0.00 38.21 2.69
5429 9588 2.011046 GCTCAAGCTGCTGTCCCTTAG 61.011 57.143 1.35 0.00 38.21 2.18
5430 9589 0.036010 TCAAGCTGCTGTCCCTTAGC 60.036 55.000 1.35 0.00 41.49 3.09
5431 9590 4.143740 AGCTGCTGTCCCTTAGCT 57.856 55.556 0.00 0.00 41.66 3.32
5432 9591 2.381445 AGCTGCTGTCCCTTAGCTT 58.619 52.632 0.00 0.00 43.49 3.74
5433 9592 0.695347 AGCTGCTGTCCCTTAGCTTT 59.305 50.000 0.00 0.00 43.49 3.51
5434 9593 0.807496 GCTGCTGTCCCTTAGCTTTG 59.193 55.000 0.00 0.00 41.66 2.77
5435 9594 0.807496 CTGCTGTCCCTTAGCTTTGC 59.193 55.000 0.00 0.00 41.66 3.68
5436 9595 0.401738 TGCTGTCCCTTAGCTTTGCT 59.598 50.000 0.00 0.00 41.66 3.91
5437 9596 1.202927 TGCTGTCCCTTAGCTTTGCTT 60.203 47.619 0.00 0.00 41.66 3.91
5438 9597 1.889170 GCTGTCCCTTAGCTTTGCTTT 59.111 47.619 0.00 0.00 40.44 3.51
5439 9598 2.095008 GCTGTCCCTTAGCTTTGCTTTC 60.095 50.000 0.00 0.00 40.44 2.62
5440 9599 3.416156 CTGTCCCTTAGCTTTGCTTTCT 58.584 45.455 0.00 0.00 40.44 2.52
5441 9600 3.823304 CTGTCCCTTAGCTTTGCTTTCTT 59.177 43.478 0.00 0.00 40.44 2.52
5442 9601 3.569701 TGTCCCTTAGCTTTGCTTTCTTG 59.430 43.478 0.00 0.00 40.44 3.02
5443 9602 2.558359 TCCCTTAGCTTTGCTTTCTTGC 59.442 45.455 0.00 0.00 40.44 4.01
5444 9603 2.560105 CCCTTAGCTTTGCTTTCTTGCT 59.440 45.455 0.00 0.00 40.44 3.91
5445 9604 3.366781 CCCTTAGCTTTGCTTTCTTGCTC 60.367 47.826 0.00 0.00 40.44 4.26
5446 9605 3.505293 CCTTAGCTTTGCTTTCTTGCTCT 59.495 43.478 0.00 0.00 40.44 4.09
5447 9606 4.474113 CTTAGCTTTGCTTTCTTGCTCTG 58.526 43.478 0.00 0.00 40.44 3.35
5448 9607 1.612463 AGCTTTGCTTTCTTGCTCTGG 59.388 47.619 0.00 0.00 33.89 3.86
5449 9608 1.339291 GCTTTGCTTTCTTGCTCTGGT 59.661 47.619 0.00 0.00 0.00 4.00
5450 9609 2.554032 GCTTTGCTTTCTTGCTCTGGTA 59.446 45.455 0.00 0.00 0.00 3.25
5451 9610 3.365767 GCTTTGCTTTCTTGCTCTGGTAG 60.366 47.826 0.00 0.00 0.00 3.18
5452 9611 3.492102 TTGCTTTCTTGCTCTGGTAGT 57.508 42.857 0.00 0.00 0.00 2.73
5453 9612 3.492102 TGCTTTCTTGCTCTGGTAGTT 57.508 42.857 0.00 0.00 0.00 2.24
5454 9613 3.820557 TGCTTTCTTGCTCTGGTAGTTT 58.179 40.909 0.00 0.00 0.00 2.66
5455 9614 3.565482 TGCTTTCTTGCTCTGGTAGTTTG 59.435 43.478 0.00 0.00 0.00 2.93
5456 9615 3.565902 GCTTTCTTGCTCTGGTAGTTTGT 59.434 43.478 0.00 0.00 0.00 2.83
5457 9616 4.319839 GCTTTCTTGCTCTGGTAGTTTGTC 60.320 45.833 0.00 0.00 0.00 3.18
5458 9617 4.689612 TTCTTGCTCTGGTAGTTTGTCT 57.310 40.909 0.00 0.00 0.00 3.41
5459 9618 4.689612 TCTTGCTCTGGTAGTTTGTCTT 57.310 40.909 0.00 0.00 0.00 3.01
5460 9619 5.036117 TCTTGCTCTGGTAGTTTGTCTTT 57.964 39.130 0.00 0.00 0.00 2.52
5461 9620 5.437060 TCTTGCTCTGGTAGTTTGTCTTTT 58.563 37.500 0.00 0.00 0.00 2.27
5462 9621 5.296780 TCTTGCTCTGGTAGTTTGTCTTTTG 59.703 40.000 0.00 0.00 0.00 2.44
5463 9622 3.882888 TGCTCTGGTAGTTTGTCTTTTGG 59.117 43.478 0.00 0.00 0.00 3.28
5464 9623 4.134563 GCTCTGGTAGTTTGTCTTTTGGA 58.865 43.478 0.00 0.00 0.00 3.53
5465 9624 4.214332 GCTCTGGTAGTTTGTCTTTTGGAG 59.786 45.833 0.00 0.00 0.00 3.86
5466 9625 5.611374 CTCTGGTAGTTTGTCTTTTGGAGA 58.389 41.667 0.00 0.00 0.00 3.71
5467 9626 6.187727 TCTGGTAGTTTGTCTTTTGGAGAT 57.812 37.500 0.00 0.00 36.61 2.75
5468 9627 6.601332 TCTGGTAGTTTGTCTTTTGGAGATT 58.399 36.000 0.00 0.00 36.61 2.40
5469 9628 6.486657 TCTGGTAGTTTGTCTTTTGGAGATTG 59.513 38.462 0.00 0.00 36.61 2.67
5470 9629 6.361433 TGGTAGTTTGTCTTTTGGAGATTGA 58.639 36.000 0.00 0.00 36.61 2.57
5471 9630 7.004086 TGGTAGTTTGTCTTTTGGAGATTGAT 58.996 34.615 0.00 0.00 36.61 2.57
5472 9631 8.160765 TGGTAGTTTGTCTTTTGGAGATTGATA 58.839 33.333 0.00 0.00 36.61 2.15
5473 9632 8.669243 GGTAGTTTGTCTTTTGGAGATTGATAG 58.331 37.037 0.00 0.00 36.61 2.08
5474 9633 7.693969 AGTTTGTCTTTTGGAGATTGATAGG 57.306 36.000 0.00 0.00 36.61 2.57
5475 9634 7.461749 AGTTTGTCTTTTGGAGATTGATAGGA 58.538 34.615 0.00 0.00 36.61 2.94
5476 9635 8.112183 AGTTTGTCTTTTGGAGATTGATAGGAT 58.888 33.333 0.00 0.00 36.61 3.24
5477 9636 8.401709 GTTTGTCTTTTGGAGATTGATAGGATC 58.598 37.037 0.00 0.00 36.61 3.36
5478 9637 7.443302 TGTCTTTTGGAGATTGATAGGATCT 57.557 36.000 0.00 0.00 36.61 2.75
5479 9638 7.278135 TGTCTTTTGGAGATTGATAGGATCTG 58.722 38.462 0.00 0.00 36.61 2.90
5480 9639 6.204495 GTCTTTTGGAGATTGATAGGATCTGC 59.796 42.308 0.00 0.00 40.94 4.26
5481 9640 5.635278 TTTGGAGATTGATAGGATCTGCA 57.365 39.130 4.51 4.51 46.06 4.41
5482 9641 4.886496 TGGAGATTGATAGGATCTGCAG 57.114 45.455 7.63 7.63 43.93 4.41
5483 9642 4.486839 TGGAGATTGATAGGATCTGCAGA 58.513 43.478 20.79 20.79 43.93 4.26
5484 9643 4.527427 TGGAGATTGATAGGATCTGCAGAG 59.473 45.833 22.96 0.00 43.93 3.35
5485 9644 4.527816 GGAGATTGATAGGATCTGCAGAGT 59.472 45.833 22.96 11.57 40.45 3.24
5486 9645 5.011943 GGAGATTGATAGGATCTGCAGAGTT 59.988 44.000 22.96 5.97 40.45 3.01
5487 9646 6.464180 GGAGATTGATAGGATCTGCAGAGTTT 60.464 42.308 22.96 11.72 40.45 2.66
5488 9647 7.256119 GGAGATTGATAGGATCTGCAGAGTTTA 60.256 40.741 22.96 13.49 40.45 2.01
5489 9648 7.669427 AGATTGATAGGATCTGCAGAGTTTAG 58.331 38.462 22.96 0.00 32.79 1.85
5490 9649 5.207110 TGATAGGATCTGCAGAGTTTAGC 57.793 43.478 22.96 15.62 0.00 3.09
5491 9650 4.898265 TGATAGGATCTGCAGAGTTTAGCT 59.102 41.667 22.96 2.55 0.00 3.32
5492 9651 3.540314 AGGATCTGCAGAGTTTAGCTG 57.460 47.619 22.96 0.00 36.47 4.24
5493 9652 2.836981 AGGATCTGCAGAGTTTAGCTGT 59.163 45.455 22.96 0.87 35.81 4.40
5494 9653 3.262915 AGGATCTGCAGAGTTTAGCTGTT 59.737 43.478 22.96 0.03 35.81 3.16
5495 9654 3.620821 GGATCTGCAGAGTTTAGCTGTTC 59.379 47.826 22.96 10.10 35.81 3.18
5496 9655 2.677199 TCTGCAGAGTTTAGCTGTTCG 58.323 47.619 13.74 0.00 35.81 3.95
5497 9656 2.035961 TCTGCAGAGTTTAGCTGTTCGT 59.964 45.455 13.74 0.00 35.81 3.85
5498 9657 3.254903 TCTGCAGAGTTTAGCTGTTCGTA 59.745 43.478 13.74 0.00 35.81 3.43
5499 9658 3.985008 TGCAGAGTTTAGCTGTTCGTAA 58.015 40.909 0.00 0.00 35.81 3.18
5500 9659 4.566004 TGCAGAGTTTAGCTGTTCGTAAT 58.434 39.130 0.00 0.00 35.81 1.89
5501 9660 4.388773 TGCAGAGTTTAGCTGTTCGTAATG 59.611 41.667 0.00 0.00 35.81 1.90
5502 9661 4.725169 GCAGAGTTTAGCTGTTCGTAATGC 60.725 45.833 0.00 0.00 35.81 3.56
5503 9662 4.388773 CAGAGTTTAGCTGTTCGTAATGCA 59.611 41.667 0.00 0.00 0.00 3.96
5504 9663 4.627467 AGAGTTTAGCTGTTCGTAATGCAG 59.373 41.667 0.00 0.00 0.00 4.41
5505 9664 4.566004 AGTTTAGCTGTTCGTAATGCAGA 58.434 39.130 0.00 0.00 32.39 4.26
5506 9665 4.389077 AGTTTAGCTGTTCGTAATGCAGAC 59.611 41.667 0.00 0.00 32.39 3.51
5507 9666 2.751166 AGCTGTTCGTAATGCAGACT 57.249 45.000 0.00 0.00 32.39 3.24
5508 9667 3.868757 AGCTGTTCGTAATGCAGACTA 57.131 42.857 0.00 0.00 32.39 2.59
5509 9668 4.392921 AGCTGTTCGTAATGCAGACTAT 57.607 40.909 0.00 0.00 32.39 2.12
5510 9669 4.759782 AGCTGTTCGTAATGCAGACTATT 58.240 39.130 0.00 0.00 32.39 1.73
5511 9670 4.806247 AGCTGTTCGTAATGCAGACTATTC 59.194 41.667 0.00 0.00 32.39 1.75
5512 9671 4.806247 GCTGTTCGTAATGCAGACTATTCT 59.194 41.667 0.00 0.00 32.39 2.40
5513 9672 5.051374 GCTGTTCGTAATGCAGACTATTCTC 60.051 44.000 0.00 0.00 32.39 2.87
5514 9673 5.034797 TGTTCGTAATGCAGACTATTCTCG 58.965 41.667 0.00 0.00 0.00 4.04
5515 9674 5.163693 TGTTCGTAATGCAGACTATTCTCGA 60.164 40.000 0.00 0.00 0.00 4.04
5516 9675 5.096954 TCGTAATGCAGACTATTCTCGAG 57.903 43.478 5.93 5.93 0.00 4.04
5517 9676 3.666334 CGTAATGCAGACTATTCTCGAGC 59.334 47.826 7.81 0.00 0.00 5.03
5518 9677 2.414058 ATGCAGACTATTCTCGAGCG 57.586 50.000 7.81 0.00 0.00 5.03
5519 9678 0.248661 TGCAGACTATTCTCGAGCGC 60.249 55.000 7.81 0.00 0.00 5.92
5520 9679 1.265462 GCAGACTATTCTCGAGCGCG 61.265 60.000 7.81 2.41 39.35 6.86
5521 9680 0.305009 CAGACTATTCTCGAGCGCGA 59.695 55.000 12.10 13.08 45.71 5.87
5522 9681 1.069568 CAGACTATTCTCGAGCGCGAT 60.070 52.381 14.27 1.23 46.80 4.58
5523 9682 1.069568 AGACTATTCTCGAGCGCGATG 60.070 52.381 14.27 7.95 46.80 3.84
5524 9683 0.039978 ACTATTCTCGAGCGCGATGG 60.040 55.000 14.27 4.58 46.80 3.51
5525 9684 1.340657 CTATTCTCGAGCGCGATGGC 61.341 60.000 14.27 0.00 46.80 4.40
5541 9700 2.281139 GCGCTAGATGCCCCTTCC 60.281 66.667 0.00 0.00 38.78 3.46
5542 9701 2.812619 GCGCTAGATGCCCCTTCCT 61.813 63.158 0.00 0.00 38.78 3.36
5543 9702 1.472662 GCGCTAGATGCCCCTTCCTA 61.473 60.000 0.00 0.00 38.78 2.94
5544 9703 0.318762 CGCTAGATGCCCCTTCCTAC 59.681 60.000 0.00 0.00 38.78 3.18
5545 9704 1.424638 GCTAGATGCCCCTTCCTACA 58.575 55.000 0.00 0.00 35.15 2.74
5546 9705 1.070914 GCTAGATGCCCCTTCCTACAC 59.929 57.143 0.00 0.00 35.15 2.90
5547 9706 1.341531 CTAGATGCCCCTTCCTACACG 59.658 57.143 0.00 0.00 0.00 4.49
5548 9707 0.617820 AGATGCCCCTTCCTACACGT 60.618 55.000 0.00 0.00 0.00 4.49
5549 9708 0.462047 GATGCCCCTTCCTACACGTG 60.462 60.000 15.48 15.48 0.00 4.49
5550 9709 1.910580 ATGCCCCTTCCTACACGTGG 61.911 60.000 21.57 1.58 0.00 4.94
5551 9710 2.590114 GCCCCTTCCTACACGTGGT 61.590 63.158 21.57 8.16 0.00 4.16
5552 9711 1.259840 GCCCCTTCCTACACGTGGTA 61.260 60.000 21.57 8.91 0.00 3.25
5553 9712 1.492764 CCCCTTCCTACACGTGGTAT 58.507 55.000 21.57 0.74 0.00 2.73
5554 9713 1.835531 CCCCTTCCTACACGTGGTATT 59.164 52.381 21.57 0.32 0.00 1.89
5555 9714 2.237893 CCCCTTCCTACACGTGGTATTT 59.762 50.000 21.57 0.00 0.00 1.40
5556 9715 3.528532 CCCTTCCTACACGTGGTATTTC 58.471 50.000 21.57 0.00 0.00 2.17
5557 9716 3.184541 CCTTCCTACACGTGGTATTTCG 58.815 50.000 21.57 2.36 0.00 3.46
5558 9717 3.367703 CCTTCCTACACGTGGTATTTCGT 60.368 47.826 21.57 0.00 40.99 3.85
5559 9718 3.940209 TCCTACACGTGGTATTTCGTT 57.060 42.857 21.57 0.00 38.23 3.85
5560 9719 4.255833 TCCTACACGTGGTATTTCGTTT 57.744 40.909 21.57 0.00 38.23 3.60
5561 9720 4.236935 TCCTACACGTGGTATTTCGTTTC 58.763 43.478 21.57 0.00 38.23 2.78
5562 9721 4.022068 TCCTACACGTGGTATTTCGTTTCT 60.022 41.667 21.57 0.00 38.23 2.52
5563 9722 4.687483 CCTACACGTGGTATTTCGTTTCTT 59.313 41.667 21.57 0.00 38.23 2.52
5564 9723 5.178067 CCTACACGTGGTATTTCGTTTCTTT 59.822 40.000 21.57 0.00 38.23 2.52
5565 9724 5.488645 ACACGTGGTATTTCGTTTCTTTT 57.511 34.783 21.57 0.00 38.23 2.27
5566 9725 5.267776 ACACGTGGTATTTCGTTTCTTTTG 58.732 37.500 21.57 0.00 38.23 2.44
5567 9726 4.145756 CACGTGGTATTTCGTTTCTTTTGC 59.854 41.667 7.95 0.00 38.23 3.68
5568 9727 4.035909 ACGTGGTATTTCGTTTCTTTTGCT 59.964 37.500 0.00 0.00 36.93 3.91
5569 9728 4.378616 CGTGGTATTTCGTTTCTTTTGCTG 59.621 41.667 0.00 0.00 0.00 4.41
5570 9729 5.516090 GTGGTATTTCGTTTCTTTTGCTGA 58.484 37.500 0.00 0.00 0.00 4.26
5571 9730 5.974751 GTGGTATTTCGTTTCTTTTGCTGAA 59.025 36.000 0.00 0.00 0.00 3.02
5572 9731 6.474102 GTGGTATTTCGTTTCTTTTGCTGAAA 59.526 34.615 0.00 0.00 0.00 2.69
5573 9732 6.474102 TGGTATTTCGTTTCTTTTGCTGAAAC 59.526 34.615 8.71 8.71 45.59 2.78
5574 9733 6.695713 GGTATTTCGTTTCTTTTGCTGAAACT 59.304 34.615 14.58 2.43 46.36 2.66
5575 9734 6.812481 ATTTCGTTTCTTTTGCTGAAACTC 57.188 33.333 14.58 0.00 46.36 3.01
5576 9735 5.560966 TTCGTTTCTTTTGCTGAAACTCT 57.439 34.783 14.58 0.00 46.36 3.24
5577 9736 5.560966 TCGTTTCTTTTGCTGAAACTCTT 57.439 34.783 14.58 0.00 46.36 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.568623 ATTTGAGGAAGCCGTTCAGT 57.431 45.000 0.00 0.00 33.93 3.41
13 14 6.377429 GGGGTAAAACTTCCCTCTTATTTGAG 59.623 42.308 0.00 0.00 43.00 3.02
14 15 6.250711 GGGGTAAAACTTCCCTCTTATTTGA 58.749 40.000 0.00 0.00 43.00 2.69
15 16 5.421056 GGGGGTAAAACTTCCCTCTTATTTG 59.579 44.000 0.00 0.00 40.97 2.32
16 17 5.586877 GGGGGTAAAACTTCCCTCTTATTT 58.413 41.667 0.00 0.00 40.97 1.40
17 18 5.202746 GGGGGTAAAACTTCCCTCTTATT 57.797 43.478 0.00 0.00 40.97 1.40
18 19 4.875578 GGGGGTAAAACTTCCCTCTTAT 57.124 45.455 0.00 0.00 40.97 1.73
36 37 2.046285 GTGAACAATGCCTCGGGGG 61.046 63.158 1.90 0.00 38.36 5.40
37 38 2.046285 GGTGAACAATGCCTCGGGG 61.046 63.158 0.00 0.00 0.00 5.73
38 39 2.046285 GGGTGAACAATGCCTCGGG 61.046 63.158 0.00 0.00 0.00 5.14
39 40 1.303236 TGGGTGAACAATGCCTCGG 60.303 57.895 0.00 0.00 0.00 4.63
40 41 1.586154 GGTGGGTGAACAATGCCTCG 61.586 60.000 0.00 0.00 0.00 4.63
41 42 1.250840 GGGTGGGTGAACAATGCCTC 61.251 60.000 0.00 0.00 0.00 4.70
42 43 1.228862 GGGTGGGTGAACAATGCCT 60.229 57.895 0.00 0.00 0.00 4.75
43 44 2.635443 CGGGTGGGTGAACAATGCC 61.635 63.158 0.00 0.00 0.00 4.40
44 45 1.175983 TTCGGGTGGGTGAACAATGC 61.176 55.000 0.00 0.00 0.00 3.56
45 46 0.596082 GTTCGGGTGGGTGAACAATG 59.404 55.000 0.56 0.00 43.06 2.82
46 47 3.030415 GTTCGGGTGGGTGAACAAT 57.970 52.632 0.56 0.00 43.06 2.71
47 48 4.563404 GTTCGGGTGGGTGAACAA 57.437 55.556 0.56 0.00 43.06 2.83
49 50 0.393820 TAGTGTTCGGGTGGGTGAAC 59.606 55.000 0.00 0.00 43.67 3.18
50 51 0.393820 GTAGTGTTCGGGTGGGTGAA 59.606 55.000 0.00 0.00 0.00 3.18
51 52 0.470456 AGTAGTGTTCGGGTGGGTGA 60.470 55.000 0.00 0.00 0.00 4.02
52 53 1.259609 TAGTAGTGTTCGGGTGGGTG 58.740 55.000 0.00 0.00 0.00 4.61
53 54 2.014010 TTAGTAGTGTTCGGGTGGGT 57.986 50.000 0.00 0.00 0.00 4.51
54 55 2.159000 GGATTAGTAGTGTTCGGGTGGG 60.159 54.545 0.00 0.00 0.00 4.61
55 56 2.159000 GGGATTAGTAGTGTTCGGGTGG 60.159 54.545 0.00 0.00 0.00 4.61
56 57 2.159000 GGGGATTAGTAGTGTTCGGGTG 60.159 54.545 0.00 0.00 0.00 4.61
57 58 2.113807 GGGGATTAGTAGTGTTCGGGT 58.886 52.381 0.00 0.00 0.00 5.28
58 59 1.415289 GGGGGATTAGTAGTGTTCGGG 59.585 57.143 0.00 0.00 0.00 5.14
59 60 2.112998 TGGGGGATTAGTAGTGTTCGG 58.887 52.381 0.00 0.00 0.00 4.30
60 61 2.764572 AGTGGGGGATTAGTAGTGTTCG 59.235 50.000 0.00 0.00 0.00 3.95
61 62 4.838904 AAGTGGGGGATTAGTAGTGTTC 57.161 45.455 0.00 0.00 0.00 3.18
62 63 5.368816 GGATAAGTGGGGGATTAGTAGTGTT 59.631 44.000 0.00 0.00 0.00 3.32
63 64 4.906060 GGATAAGTGGGGGATTAGTAGTGT 59.094 45.833 0.00 0.00 0.00 3.55
64 65 4.286291 GGGATAAGTGGGGGATTAGTAGTG 59.714 50.000 0.00 0.00 0.00 2.74
65 66 4.174253 AGGGATAAGTGGGGGATTAGTAGT 59.826 45.833 0.00 0.00 0.00 2.73
66 67 4.764491 AGGGATAAGTGGGGGATTAGTAG 58.236 47.826 0.00 0.00 0.00 2.57
67 68 4.864252 AGGGATAAGTGGGGGATTAGTA 57.136 45.455 0.00 0.00 0.00 1.82
68 69 3.745678 AGGGATAAGTGGGGGATTAGT 57.254 47.619 0.00 0.00 0.00 2.24
69 70 3.330998 GGAAGGGATAAGTGGGGGATTAG 59.669 52.174 0.00 0.00 0.00 1.73
70 71 3.332968 GGAAGGGATAAGTGGGGGATTA 58.667 50.000 0.00 0.00 0.00 1.75
71 72 2.144450 GGAAGGGATAAGTGGGGGATT 58.856 52.381 0.00 0.00 0.00 3.01
72 73 1.702567 GGGAAGGGATAAGTGGGGGAT 60.703 57.143 0.00 0.00 0.00 3.85
73 74 0.328158 GGGAAGGGATAAGTGGGGGA 60.328 60.000 0.00 0.00 0.00 4.81
74 75 1.361176 GGGGAAGGGATAAGTGGGGG 61.361 65.000 0.00 0.00 0.00 5.40
75 76 1.361176 GGGGGAAGGGATAAGTGGGG 61.361 65.000 0.00 0.00 0.00 4.96
76 77 0.626277 TGGGGGAAGGGATAAGTGGG 60.626 60.000 0.00 0.00 0.00 4.61
77 78 0.551396 GTGGGGGAAGGGATAAGTGG 59.449 60.000 0.00 0.00 0.00 4.00
78 79 1.295020 TGTGGGGGAAGGGATAAGTG 58.705 55.000 0.00 0.00 0.00 3.16
79 80 2.068831 TTGTGGGGGAAGGGATAAGT 57.931 50.000 0.00 0.00 0.00 2.24
80 81 2.158460 GGATTGTGGGGGAAGGGATAAG 60.158 54.545 0.00 0.00 0.00 1.73
81 82 1.856920 GGATTGTGGGGGAAGGGATAA 59.143 52.381 0.00 0.00 0.00 1.75
82 83 1.012049 AGGATTGTGGGGGAAGGGATA 59.988 52.381 0.00 0.00 0.00 2.59
83 84 0.254299 AGGATTGTGGGGGAAGGGAT 60.254 55.000 0.00 0.00 0.00 3.85
84 85 0.479589 AAGGATTGTGGGGGAAGGGA 60.480 55.000 0.00 0.00 0.00 4.20
85 86 0.324645 CAAGGATTGTGGGGGAAGGG 60.325 60.000 0.00 0.00 42.34 3.95
86 87 3.288099 CAAGGATTGTGGGGGAAGG 57.712 57.895 0.00 0.00 42.34 3.46
112 113 4.517832 GGATGGGATTTAACGGAATGGTAC 59.482 45.833 0.00 0.00 0.00 3.34
113 114 4.446600 GGGATGGGATTTAACGGAATGGTA 60.447 45.833 0.00 0.00 0.00 3.25
114 115 3.562182 GGATGGGATTTAACGGAATGGT 58.438 45.455 0.00 0.00 0.00 3.55
115 116 2.890945 GGGATGGGATTTAACGGAATGG 59.109 50.000 0.00 0.00 0.00 3.16
116 117 2.890945 GGGGATGGGATTTAACGGAATG 59.109 50.000 0.00 0.00 0.00 2.67
117 118 2.516277 TGGGGATGGGATTTAACGGAAT 59.484 45.455 0.00 0.00 0.00 3.01
118 119 1.923850 TGGGGATGGGATTTAACGGAA 59.076 47.619 0.00 0.00 0.00 4.30
119 120 1.597681 TGGGGATGGGATTTAACGGA 58.402 50.000 0.00 0.00 0.00 4.69
120 121 2.306847 CTTGGGGATGGGATTTAACGG 58.693 52.381 0.00 0.00 0.00 4.44
121 122 2.949644 GACTTGGGGATGGGATTTAACG 59.050 50.000 0.00 0.00 0.00 3.18
122 123 3.296854 GGACTTGGGGATGGGATTTAAC 58.703 50.000 0.00 0.00 0.00 2.01
123 124 2.929724 TGGACTTGGGGATGGGATTTAA 59.070 45.455 0.00 0.00 0.00 1.52
124 125 2.579100 TGGACTTGGGGATGGGATTTA 58.421 47.619 0.00 0.00 0.00 1.40
125 126 1.392407 TGGACTTGGGGATGGGATTT 58.608 50.000 0.00 0.00 0.00 2.17
126 127 1.288932 CTTGGACTTGGGGATGGGATT 59.711 52.381 0.00 0.00 0.00 3.01
127 128 0.929244 CTTGGACTTGGGGATGGGAT 59.071 55.000 0.00 0.00 0.00 3.85
128 129 0.178846 TCTTGGACTTGGGGATGGGA 60.179 55.000 0.00 0.00 0.00 4.37
129 130 0.704076 TTCTTGGACTTGGGGATGGG 59.296 55.000 0.00 0.00 0.00 4.00
130 131 2.171003 GTTTCTTGGACTTGGGGATGG 58.829 52.381 0.00 0.00 0.00 3.51
131 132 2.875296 TGTTTCTTGGACTTGGGGATG 58.125 47.619 0.00 0.00 0.00 3.51
132 133 3.117131 ACTTGTTTCTTGGACTTGGGGAT 60.117 43.478 0.00 0.00 0.00 3.85
133 134 2.243736 ACTTGTTTCTTGGACTTGGGGA 59.756 45.455 0.00 0.00 0.00 4.81
134 135 2.666317 ACTTGTTTCTTGGACTTGGGG 58.334 47.619 0.00 0.00 0.00 4.96
135 136 4.642885 TGTTACTTGTTTCTTGGACTTGGG 59.357 41.667 0.00 0.00 0.00 4.12
136 137 5.733373 GCTGTTACTTGTTTCTTGGACTTGG 60.733 44.000 0.00 0.00 0.00 3.61
137 138 5.163663 TGCTGTTACTTGTTTCTTGGACTTG 60.164 40.000 0.00 0.00 0.00 3.16
138 139 4.947388 TGCTGTTACTTGTTTCTTGGACTT 59.053 37.500 0.00 0.00 0.00 3.01
139 140 4.335594 GTGCTGTTACTTGTTTCTTGGACT 59.664 41.667 0.00 0.00 0.00 3.85
140 141 4.095782 TGTGCTGTTACTTGTTTCTTGGAC 59.904 41.667 0.00 0.00 0.00 4.02
141 142 4.265893 TGTGCTGTTACTTGTTTCTTGGA 58.734 39.130 0.00 0.00 0.00 3.53
142 143 4.630894 TGTGCTGTTACTTGTTTCTTGG 57.369 40.909 0.00 0.00 0.00 3.61
143 144 5.215160 GGATGTGCTGTTACTTGTTTCTTG 58.785 41.667 0.00 0.00 0.00 3.02
144 145 4.887071 TGGATGTGCTGTTACTTGTTTCTT 59.113 37.500 0.00 0.00 0.00 2.52
145 146 4.275936 GTGGATGTGCTGTTACTTGTTTCT 59.724 41.667 0.00 0.00 0.00 2.52
146 147 4.036262 TGTGGATGTGCTGTTACTTGTTTC 59.964 41.667 0.00 0.00 0.00 2.78
147 148 3.951037 TGTGGATGTGCTGTTACTTGTTT 59.049 39.130 0.00 0.00 0.00 2.83
148 149 3.315191 GTGTGGATGTGCTGTTACTTGTT 59.685 43.478 0.00 0.00 0.00 2.83
149 150 2.878406 GTGTGGATGTGCTGTTACTTGT 59.122 45.455 0.00 0.00 0.00 3.16
150 151 2.877786 TGTGTGGATGTGCTGTTACTTG 59.122 45.455 0.00 0.00 0.00 3.16
151 152 3.207265 TGTGTGGATGTGCTGTTACTT 57.793 42.857 0.00 0.00 0.00 2.24
152 153 2.928801 TGTGTGGATGTGCTGTTACT 57.071 45.000 0.00 0.00 0.00 2.24
153 154 3.073678 TCATGTGTGGATGTGCTGTTAC 58.926 45.455 0.00 0.00 0.00 2.50
154 155 3.415457 TCATGTGTGGATGTGCTGTTA 57.585 42.857 0.00 0.00 0.00 2.41
155 156 2.275134 TCATGTGTGGATGTGCTGTT 57.725 45.000 0.00 0.00 0.00 3.16
156 157 2.275134 TTCATGTGTGGATGTGCTGT 57.725 45.000 0.00 0.00 0.00 4.40
157 158 3.861276 ATTTCATGTGTGGATGTGCTG 57.139 42.857 0.00 0.00 0.00 4.41
158 159 4.877378 AAATTTCATGTGTGGATGTGCT 57.123 36.364 0.00 0.00 0.00 4.40
159 160 5.574055 CAGTAAATTTCATGTGTGGATGTGC 59.426 40.000 0.00 0.00 0.00 4.57
172 173 6.093495 GGCACTAGCACATACAGTAAATTTCA 59.907 38.462 0.00 0.00 44.61 2.69
173 174 6.093495 TGGCACTAGCACATACAGTAAATTTC 59.907 38.462 0.00 0.00 44.61 2.17
194 195 2.557924 CTCCTTTGCTTTGTGTATGGCA 59.442 45.455 0.00 0.00 0.00 4.92
195 196 2.819608 TCTCCTTTGCTTTGTGTATGGC 59.180 45.455 0.00 0.00 0.00 4.40
196 197 4.074970 ACTCTCCTTTGCTTTGTGTATGG 58.925 43.478 0.00 0.00 0.00 2.74
209 210 5.238583 CGAAACCATACTGAACTCTCCTTT 58.761 41.667 0.00 0.00 0.00 3.11
256 260 1.089920 AGCTGCTCAAAAGTATGCCG 58.910 50.000 0.00 0.00 0.00 5.69
257 261 4.907879 ATTAGCTGCTCAAAAGTATGCC 57.092 40.909 4.91 0.00 0.00 4.40
263 267 8.239314 TCAAGTGAATAATTAGCTGCTCAAAAG 58.761 33.333 4.91 0.00 0.00 2.27
305 309 3.566210 CAACGTGGACCACCCCCT 61.566 66.667 19.11 0.00 34.81 4.79
310 314 3.343421 GTCGCCAACGTGGACCAC 61.343 66.667 15.13 15.13 40.96 4.16
526 1736 2.099098 AGCAAACAAAAGTTGAGACGGG 59.901 45.455 0.00 0.00 0.00 5.28
529 1739 5.491635 AGAGAGCAAACAAAAGTTGAGAC 57.508 39.130 0.00 0.00 0.00 3.36
564 1774 5.016173 TCAACAAAGTTGGGATTAGATGGG 58.984 41.667 9.72 0.00 0.00 4.00
601 1811 2.221286 CAGCGAGATTGCAGATGCTAAG 59.779 50.000 6.35 0.00 42.66 2.18
632 1844 3.822594 TGCAACCATACGCACTAAAAG 57.177 42.857 0.00 0.00 31.95 2.27
724 1936 2.096069 CACATCACACAGTTGCTGCTAC 60.096 50.000 6.10 6.10 34.37 3.58
761 2025 3.543680 TTCTGCAACTAGATGGGCTAC 57.456 47.619 0.00 0.00 0.00 3.58
765 2029 7.275920 AGTAGTTAATTCTGCAACTAGATGGG 58.724 38.462 0.00 0.00 37.79 4.00
801 2162 7.915923 GCTTGTTTATCTTTAATTAGCCTGGTC 59.084 37.037 0.00 0.00 0.00 4.02
842 2203 2.827921 CCCCCAATGAGAAAAAGTCAGG 59.172 50.000 0.00 0.00 0.00 3.86
888 2250 5.105837 ACACGGGAATACTCTTCACTAGTTC 60.106 44.000 0.00 0.00 0.00 3.01
894 2256 2.163010 TCGACACGGGAATACTCTTCAC 59.837 50.000 0.00 0.00 0.00 3.18
1018 2380 0.102844 TTTTCCTTCGTGTCGTCGGT 59.897 50.000 0.00 0.00 0.00 4.69
1019 2381 1.126113 CATTTTCCTTCGTGTCGTCGG 59.874 52.381 0.00 0.00 0.00 4.79
1131 2508 3.366679 CCATCACAACCAGCATTGTCTTC 60.367 47.826 0.00 0.00 40.89 2.87
1183 2560 1.687682 GCTCATGACCTCTGGGAGAGA 60.688 57.143 2.01 0.00 45.07 3.10
1320 2698 1.748403 GGAGCCATATGCCGTGAGA 59.252 57.895 0.00 0.00 42.71 3.27
1952 3333 8.202461 TCTAGATTTATTACATGGGACGGAAT 57.798 34.615 0.00 0.00 0.00 3.01
2027 3408 4.523173 TCCAACTAGGAGGTATAAGATGCG 59.477 45.833 0.00 0.00 43.07 4.73
2093 3475 4.275196 GCTCAATGCTTGATGCTTCAGATA 59.725 41.667 2.23 0.00 43.37 1.98
2139 3530 4.023963 GGAACAGAACTGGTTAGCTGAAAC 60.024 45.833 0.00 0.00 34.19 2.78
2384 3832 3.117888 TGAAGTTTGAGGCCCCTATCATC 60.118 47.826 0.00 0.00 0.00 2.92
2389 3837 3.460825 ACTATGAAGTTTGAGGCCCCTA 58.539 45.455 0.00 0.00 29.00 3.53
2443 3912 3.081061 CCCAACTAGCACAGCATACAAA 58.919 45.455 0.00 0.00 0.00 2.83
2590 4185 7.896383 TGGATTGTATTATTTGAAAGGGAGG 57.104 36.000 0.00 0.00 0.00 4.30
2627 4391 9.998106 GCTGGTTTATCTGAGGAGTTAAATATA 57.002 33.333 0.00 0.00 29.93 0.86
2639 4406 3.340814 ACTGGTGCTGGTTTATCTGAG 57.659 47.619 0.00 0.00 0.00 3.35
2640 4407 3.788227 AACTGGTGCTGGTTTATCTGA 57.212 42.857 0.00 0.00 0.00 3.27
2641 4408 3.612479 GCAAACTGGTGCTGGTTTATCTG 60.612 47.826 0.00 0.00 41.51 2.90
2764 5572 9.561069 GTGGGAATGAAACAATACTACTATCAT 57.439 33.333 0.00 0.00 0.00 2.45
2891 6361 5.011329 TGTGTCCGTACTTCCTTGTAAATCT 59.989 40.000 0.00 0.00 0.00 2.40
2899 6369 3.830755 ACTACATGTGTCCGTACTTCCTT 59.169 43.478 9.11 0.00 0.00 3.36
2983 6764 6.167685 ACTAATTACATGTGTCCGCAGTTAA 58.832 36.000 9.11 0.00 0.00 2.01
2987 6768 4.629634 TCAACTAATTACATGTGTCCGCAG 59.370 41.667 9.11 0.78 0.00 5.18
3051 6835 3.620419 TTGTGCGCGATCCATGGGT 62.620 57.895 12.10 3.70 0.00 4.51
3052 6836 2.823593 TTGTGCGCGATCCATGGG 60.824 61.111 12.10 0.00 0.00 4.00
3065 6849 8.574196 TCATTGTGTGTATATCGTATCTTGTG 57.426 34.615 0.00 0.00 0.00 3.33
3178 6964 3.990959 AGTTCATCAAGGGGAGAAGAC 57.009 47.619 0.00 0.00 0.00 3.01
3186 6972 9.853177 AGGTATTTCTATTAAGTTCATCAAGGG 57.147 33.333 0.00 0.00 0.00 3.95
3202 6988 5.165961 AGCTCTGCAAACAGGTATTTCTA 57.834 39.130 0.00 0.00 44.59 2.10
3263 7049 3.073356 ACTCCCGTTTTCATCCCTTTGTA 59.927 43.478 0.00 0.00 0.00 2.41
3453 7239 2.028930 ACTGCTCGGAGACTTGTTAAGG 60.029 50.000 9.69 0.00 0.00 2.69
3468 7254 1.285023 CTGCAAACCAGCACTGCTC 59.715 57.895 0.00 0.00 40.11 4.26
3477 7263 1.271871 CCCATACTGTCCTGCAAACCA 60.272 52.381 0.00 0.00 0.00 3.67
3705 7491 5.721960 TGATATATCTAGAGGAGTTTGCCCC 59.278 44.000 13.79 0.00 0.00 5.80
3796 7585 8.465999 TCCATTATTTGCTTTCATATCAAACGT 58.534 29.630 0.00 0.00 33.24 3.99
3805 7594 8.316214 ACACAAATCTCCATTATTTGCTTTCAT 58.684 29.630 8.13 0.00 44.52 2.57
4200 7989 8.397957 AGAGTATCCAGAATACATGAGACCTAT 58.602 37.037 0.00 0.00 42.40 2.57
4317 8106 4.258543 GCTAGCACCATGTACAAACCTAA 58.741 43.478 10.63 0.00 0.00 2.69
4343 8132 2.617274 GGCGGACTTGTGAGCAACC 61.617 63.158 0.00 0.00 0.00 3.77
4591 8384 1.734465 GTCATGAGTGCTGGTAGTTGC 59.266 52.381 0.00 0.00 0.00 4.17
4690 8495 7.883217 AGAGAAAAATAGACTGACGACTACAA 58.117 34.615 0.00 0.00 0.00 2.41
4779 8587 6.232139 TCAGCATTTACATGATTATGAGCG 57.768 37.500 4.20 0.00 37.73 5.03
4959 9045 4.030913 AGGCAAGTATCAAGGCACTAGTA 58.969 43.478 0.00 0.00 38.49 1.82
5020 9122 5.288804 CAAACAGTTACCCAAATCCAACAG 58.711 41.667 0.00 0.00 0.00 3.16
5259 9393 4.010349 GAGGGCAGTATAACTTGCACTTT 58.990 43.478 10.25 0.00 36.57 2.66
5262 9421 3.268023 AGAGGGCAGTATAACTTGCAC 57.732 47.619 0.00 4.02 0.00 4.57
5291 9450 5.819901 GGAAGAATTGACAAGTCCTATCCTG 59.180 44.000 18.21 0.00 0.00 3.86
5295 9454 4.770795 CCGGAAGAATTGACAAGTCCTAT 58.229 43.478 11.80 0.00 0.00 2.57
5296 9455 3.618997 GCCGGAAGAATTGACAAGTCCTA 60.619 47.826 5.05 0.00 0.00 2.94
5297 9456 2.876079 GCCGGAAGAATTGACAAGTCCT 60.876 50.000 5.05 0.00 0.00 3.85
5298 9457 1.468914 GCCGGAAGAATTGACAAGTCC 59.531 52.381 5.05 6.07 0.00 3.85
5299 9458 2.427506 AGCCGGAAGAATTGACAAGTC 58.572 47.619 5.05 7.55 0.00 3.01
5300 9459 2.568623 AGCCGGAAGAATTGACAAGT 57.431 45.000 5.05 0.00 0.00 3.16
5301 9460 3.923017 AAAGCCGGAAGAATTGACAAG 57.077 42.857 5.05 0.00 0.00 3.16
5302 9461 5.067936 TGTTTAAAGCCGGAAGAATTGACAA 59.932 36.000 5.05 0.00 0.00 3.18
5303 9462 4.580995 TGTTTAAAGCCGGAAGAATTGACA 59.419 37.500 5.05 0.00 0.00 3.58
5304 9463 4.915667 GTGTTTAAAGCCGGAAGAATTGAC 59.084 41.667 5.05 0.00 0.00 3.18
5305 9464 4.825085 AGTGTTTAAAGCCGGAAGAATTGA 59.175 37.500 5.05 0.00 0.00 2.57
5306 9465 4.917415 CAGTGTTTAAAGCCGGAAGAATTG 59.083 41.667 5.05 0.00 0.00 2.32
5307 9466 4.825085 TCAGTGTTTAAAGCCGGAAGAATT 59.175 37.500 5.05 0.00 0.00 2.17
5308 9467 4.394729 TCAGTGTTTAAAGCCGGAAGAAT 58.605 39.130 5.05 0.00 0.00 2.40
5309 9468 3.811083 TCAGTGTTTAAAGCCGGAAGAA 58.189 40.909 5.05 0.00 0.00 2.52
5310 9469 3.478857 TCAGTGTTTAAAGCCGGAAGA 57.521 42.857 5.05 0.00 0.00 2.87
5311 9470 3.564225 AGTTCAGTGTTTAAAGCCGGAAG 59.436 43.478 5.05 0.00 0.00 3.46
5312 9471 3.547746 AGTTCAGTGTTTAAAGCCGGAA 58.452 40.909 5.05 0.00 0.00 4.30
5313 9472 3.202829 AGTTCAGTGTTTAAAGCCGGA 57.797 42.857 5.05 0.00 0.00 5.14
5314 9473 3.120304 GCTAGTTCAGTGTTTAAAGCCGG 60.120 47.826 0.00 0.00 0.00 6.13
5315 9474 3.120304 GGCTAGTTCAGTGTTTAAAGCCG 60.120 47.826 9.39 0.00 38.94 5.52
5316 9475 3.818773 TGGCTAGTTCAGTGTTTAAAGCC 59.181 43.478 14.94 14.94 46.71 4.35
5317 9476 5.432885 TTGGCTAGTTCAGTGTTTAAAGC 57.567 39.130 0.00 0.00 0.00 3.51
5318 9477 5.531287 ACCTTGGCTAGTTCAGTGTTTAAAG 59.469 40.000 0.00 0.00 0.00 1.85
5319 9478 5.442391 ACCTTGGCTAGTTCAGTGTTTAAA 58.558 37.500 0.00 0.00 0.00 1.52
5320 9479 5.043737 ACCTTGGCTAGTTCAGTGTTTAA 57.956 39.130 0.00 0.00 0.00 1.52
5321 9480 4.699925 ACCTTGGCTAGTTCAGTGTTTA 57.300 40.909 0.00 0.00 0.00 2.01
5322 9481 3.577805 ACCTTGGCTAGTTCAGTGTTT 57.422 42.857 0.00 0.00 0.00 2.83
5323 9482 3.577805 AACCTTGGCTAGTTCAGTGTT 57.422 42.857 0.00 0.00 0.00 3.32
5324 9483 3.577805 AAACCTTGGCTAGTTCAGTGT 57.422 42.857 0.00 0.00 0.00 3.55
5325 9484 4.819630 TGTTAAACCTTGGCTAGTTCAGTG 59.180 41.667 0.00 0.00 0.00 3.66
5326 9485 4.820173 GTGTTAAACCTTGGCTAGTTCAGT 59.180 41.667 0.00 0.00 0.00 3.41
5327 9486 4.819630 TGTGTTAAACCTTGGCTAGTTCAG 59.180 41.667 0.00 0.00 0.00 3.02
5328 9487 4.783055 TGTGTTAAACCTTGGCTAGTTCA 58.217 39.130 0.00 0.00 0.00 3.18
5329 9488 5.472137 TGATGTGTTAAACCTTGGCTAGTTC 59.528 40.000 0.00 0.00 0.00 3.01
5330 9489 5.240844 GTGATGTGTTAAACCTTGGCTAGTT 59.759 40.000 0.00 0.00 0.00 2.24
5331 9490 4.760204 GTGATGTGTTAAACCTTGGCTAGT 59.240 41.667 0.00 0.00 0.00 2.57
5332 9491 4.759693 TGTGATGTGTTAAACCTTGGCTAG 59.240 41.667 0.00 0.00 0.00 3.42
5333 9492 4.517453 GTGTGATGTGTTAAACCTTGGCTA 59.483 41.667 0.00 0.00 0.00 3.93
5334 9493 3.317993 GTGTGATGTGTTAAACCTTGGCT 59.682 43.478 0.00 0.00 0.00 4.75
5335 9494 3.552068 GGTGTGATGTGTTAAACCTTGGC 60.552 47.826 0.00 0.00 0.00 4.52
5336 9495 3.634448 TGGTGTGATGTGTTAAACCTTGG 59.366 43.478 0.00 0.00 0.00 3.61
5337 9496 4.909696 TGGTGTGATGTGTTAAACCTTG 57.090 40.909 0.00 0.00 0.00 3.61
5338 9497 5.385198 AGATGGTGTGATGTGTTAAACCTT 58.615 37.500 0.00 0.00 0.00 3.50
5339 9498 4.985538 AGATGGTGTGATGTGTTAAACCT 58.014 39.130 0.00 0.00 0.00 3.50
5340 9499 5.938125 AGTAGATGGTGTGATGTGTTAAACC 59.062 40.000 0.00 0.00 0.00 3.27
5341 9500 8.542497 TTAGTAGATGGTGTGATGTGTTAAAC 57.458 34.615 0.00 0.00 0.00 2.01
5342 9501 9.378551 GATTAGTAGATGGTGTGATGTGTTAAA 57.621 33.333 0.00 0.00 0.00 1.52
5343 9502 8.758829 AGATTAGTAGATGGTGTGATGTGTTAA 58.241 33.333 0.00 0.00 0.00 2.01
5344 9503 8.306313 AGATTAGTAGATGGTGTGATGTGTTA 57.694 34.615 0.00 0.00 0.00 2.41
5345 9504 7.124901 AGAGATTAGTAGATGGTGTGATGTGTT 59.875 37.037 0.00 0.00 0.00 3.32
5346 9505 6.609212 AGAGATTAGTAGATGGTGTGATGTGT 59.391 38.462 0.00 0.00 0.00 3.72
5347 9506 7.048629 AGAGATTAGTAGATGGTGTGATGTG 57.951 40.000 0.00 0.00 0.00 3.21
5348 9507 7.667575 AAGAGATTAGTAGATGGTGTGATGT 57.332 36.000 0.00 0.00 0.00 3.06
5351 9510 8.144478 GCATAAAGAGATTAGTAGATGGTGTGA 58.856 37.037 0.00 0.00 0.00 3.58
5352 9511 7.115520 CGCATAAAGAGATTAGTAGATGGTGTG 59.884 40.741 0.00 0.00 0.00 3.82
5353 9512 7.148641 CGCATAAAGAGATTAGTAGATGGTGT 58.851 38.462 0.00 0.00 0.00 4.16
5354 9513 6.090088 GCGCATAAAGAGATTAGTAGATGGTG 59.910 42.308 0.30 0.00 0.00 4.17
5355 9514 6.015010 AGCGCATAAAGAGATTAGTAGATGGT 60.015 38.462 11.47 0.00 0.00 3.55
5356 9515 6.309980 CAGCGCATAAAGAGATTAGTAGATGG 59.690 42.308 11.47 0.00 0.00 3.51
5357 9516 6.309980 CCAGCGCATAAAGAGATTAGTAGATG 59.690 42.308 11.47 0.00 0.00 2.90
5358 9517 6.209589 TCCAGCGCATAAAGAGATTAGTAGAT 59.790 38.462 11.47 0.00 0.00 1.98
5359 9518 5.535030 TCCAGCGCATAAAGAGATTAGTAGA 59.465 40.000 11.47 0.00 0.00 2.59
5360 9519 5.773575 TCCAGCGCATAAAGAGATTAGTAG 58.226 41.667 11.47 0.00 0.00 2.57
5361 9520 5.784578 TCCAGCGCATAAAGAGATTAGTA 57.215 39.130 11.47 0.00 0.00 1.82
5362 9521 4.672587 TCCAGCGCATAAAGAGATTAGT 57.327 40.909 11.47 0.00 0.00 2.24
5363 9522 4.450419 CCTTCCAGCGCATAAAGAGATTAG 59.550 45.833 11.47 0.00 0.00 1.73
5364 9523 4.380531 CCTTCCAGCGCATAAAGAGATTA 58.619 43.478 11.47 0.00 0.00 1.75
5365 9524 3.209410 CCTTCCAGCGCATAAAGAGATT 58.791 45.455 11.47 0.00 0.00 2.40
5366 9525 2.486191 CCCTTCCAGCGCATAAAGAGAT 60.486 50.000 11.47 0.00 0.00 2.75
5367 9526 1.134401 CCCTTCCAGCGCATAAAGAGA 60.134 52.381 11.47 0.00 0.00 3.10
5368 9527 1.303309 CCCTTCCAGCGCATAAAGAG 58.697 55.000 11.47 0.00 0.00 2.85
5369 9528 0.618458 ACCCTTCCAGCGCATAAAGA 59.382 50.000 11.47 0.00 0.00 2.52
5370 9529 0.734889 CACCCTTCCAGCGCATAAAG 59.265 55.000 11.47 9.43 0.00 1.85
5371 9530 0.326595 TCACCCTTCCAGCGCATAAA 59.673 50.000 11.47 0.00 0.00 1.40
5372 9531 0.326595 TTCACCCTTCCAGCGCATAA 59.673 50.000 11.47 0.00 0.00 1.90
5373 9532 0.326595 TTTCACCCTTCCAGCGCATA 59.673 50.000 11.47 0.00 0.00 3.14
5374 9533 0.539438 TTTTCACCCTTCCAGCGCAT 60.539 50.000 11.47 0.00 0.00 4.73
5375 9534 0.753479 TTTTTCACCCTTCCAGCGCA 60.753 50.000 11.47 0.00 0.00 6.09
5376 9535 0.039165 CTTTTTCACCCTTCCAGCGC 60.039 55.000 0.00 0.00 0.00 5.92
5377 9536 0.598065 CCTTTTTCACCCTTCCAGCG 59.402 55.000 0.00 0.00 0.00 5.18
5378 9537 0.318441 GCCTTTTTCACCCTTCCAGC 59.682 55.000 0.00 0.00 0.00 4.85
5379 9538 0.969149 GGCCTTTTTCACCCTTCCAG 59.031 55.000 0.00 0.00 0.00 3.86
5380 9539 0.471022 GGGCCTTTTTCACCCTTCCA 60.471 55.000 0.84 0.00 40.75 3.53
5381 9540 1.192146 GGGGCCTTTTTCACCCTTCC 61.192 60.000 0.84 0.00 43.68 3.46
5382 9541 2.362242 GGGGCCTTTTTCACCCTTC 58.638 57.895 0.84 0.00 43.68 3.46
5383 9542 4.639726 GGGGCCTTTTTCACCCTT 57.360 55.556 0.84 0.00 43.68 3.95
5385 9544 2.583441 GCAGGGGCCTTTTTCACCC 61.583 63.158 0.84 0.00 43.69 4.61
5386 9545 0.251608 TAGCAGGGGCCTTTTTCACC 60.252 55.000 0.84 0.00 42.56 4.02
5387 9546 0.888619 GTAGCAGGGGCCTTTTTCAC 59.111 55.000 0.84 0.00 42.56 3.18
5388 9547 0.251608 GGTAGCAGGGGCCTTTTTCA 60.252 55.000 0.84 0.00 42.56 2.69
5389 9548 0.039764 AGGTAGCAGGGGCCTTTTTC 59.960 55.000 0.84 0.00 42.56 2.29
5390 9549 0.251787 CAGGTAGCAGGGGCCTTTTT 60.252 55.000 0.84 0.00 42.56 1.94
5391 9550 1.384191 CAGGTAGCAGGGGCCTTTT 59.616 57.895 0.84 0.00 42.56 2.27
5392 9551 3.090765 CAGGTAGCAGGGGCCTTT 58.909 61.111 0.84 0.00 42.56 3.11
5393 9552 3.732849 GCAGGTAGCAGGGGCCTT 61.733 66.667 0.84 0.00 44.79 4.35
5402 9561 1.078567 AGCAGCTTGAGCAGGTAGC 60.079 57.895 5.70 1.70 45.16 3.58
5403 9562 0.036577 ACAGCAGCTTGAGCAGGTAG 60.037 55.000 5.70 1.60 45.16 3.18
5404 9563 0.036952 GACAGCAGCTTGAGCAGGTA 60.037 55.000 5.70 0.00 45.16 3.08
5405 9564 1.302351 GACAGCAGCTTGAGCAGGT 60.302 57.895 5.70 0.00 45.16 4.00
5406 9565 2.039405 GGACAGCAGCTTGAGCAGG 61.039 63.158 5.70 0.00 45.16 4.85
5407 9566 2.039405 GGGACAGCAGCTTGAGCAG 61.039 63.158 5.70 0.00 45.16 4.24
5408 9567 2.033141 GGGACAGCAGCTTGAGCA 59.967 61.111 5.70 0.00 45.16 4.26
5409 9568 0.036010 TAAGGGACAGCAGCTTGAGC 60.036 55.000 0.00 0.00 42.49 4.26
5410 9569 2.011046 GCTAAGGGACAGCAGCTTGAG 61.011 57.143 0.00 0.00 38.93 3.02
5411 9570 0.036010 GCTAAGGGACAGCAGCTTGA 60.036 55.000 0.00 0.00 38.93 3.02
5412 9571 0.035630 AGCTAAGGGACAGCAGCTTG 60.036 55.000 0.00 0.00 41.50 4.01
5413 9572 0.695347 AAGCTAAGGGACAGCAGCTT 59.305 50.000 0.00 1.97 46.69 3.74
5414 9573 0.695347 AAAGCTAAGGGACAGCAGCT 59.305 50.000 0.00 0.00 46.05 4.24
5415 9574 0.807496 CAAAGCTAAGGGACAGCAGC 59.193 55.000 0.00 0.00 41.66 5.25
5416 9575 0.807496 GCAAAGCTAAGGGACAGCAG 59.193 55.000 0.00 0.00 41.66 4.24
5417 9576 0.401738 AGCAAAGCTAAGGGACAGCA 59.598 50.000 0.00 0.00 41.66 4.41
5418 9577 1.539157 AAGCAAAGCTAAGGGACAGC 58.461 50.000 0.00 0.00 38.25 4.40
5419 9578 3.416156 AGAAAGCAAAGCTAAGGGACAG 58.584 45.455 0.00 0.00 38.25 3.51
5420 9579 3.508845 AGAAAGCAAAGCTAAGGGACA 57.491 42.857 0.00 0.00 38.25 4.02
5421 9580 3.612717 GCAAGAAAGCAAAGCTAAGGGAC 60.613 47.826 0.00 0.00 38.25 4.46
5422 9581 2.558359 GCAAGAAAGCAAAGCTAAGGGA 59.442 45.455 0.00 0.00 38.25 4.20
5423 9582 2.560105 AGCAAGAAAGCAAAGCTAAGGG 59.440 45.455 0.00 0.00 38.25 3.95
5424 9583 3.505293 AGAGCAAGAAAGCAAAGCTAAGG 59.495 43.478 0.00 0.00 38.25 2.69
5425 9584 4.474113 CAGAGCAAGAAAGCAAAGCTAAG 58.526 43.478 0.00 0.00 38.25 2.18
5426 9585 3.254166 CCAGAGCAAGAAAGCAAAGCTAA 59.746 43.478 0.00 0.00 38.25 3.09
5427 9586 2.816087 CCAGAGCAAGAAAGCAAAGCTA 59.184 45.455 0.00 0.00 38.25 3.32
5428 9587 1.612463 CCAGAGCAAGAAAGCAAAGCT 59.388 47.619 0.00 0.00 42.56 3.74
5429 9588 1.339291 ACCAGAGCAAGAAAGCAAAGC 59.661 47.619 0.00 0.00 36.85 3.51
5430 9589 3.817647 ACTACCAGAGCAAGAAAGCAAAG 59.182 43.478 0.00 0.00 36.85 2.77
5431 9590 3.820557 ACTACCAGAGCAAGAAAGCAAA 58.179 40.909 0.00 0.00 36.85 3.68
5432 9591 3.492102 ACTACCAGAGCAAGAAAGCAA 57.508 42.857 0.00 0.00 36.85 3.91
5433 9592 3.492102 AACTACCAGAGCAAGAAAGCA 57.508 42.857 0.00 0.00 36.85 3.91
5434 9593 3.565902 ACAAACTACCAGAGCAAGAAAGC 59.434 43.478 0.00 0.00 0.00 3.51
5435 9594 5.059833 AGACAAACTACCAGAGCAAGAAAG 58.940 41.667 0.00 0.00 0.00 2.62
5436 9595 5.036117 AGACAAACTACCAGAGCAAGAAA 57.964 39.130 0.00 0.00 0.00 2.52
5437 9596 4.689612 AGACAAACTACCAGAGCAAGAA 57.310 40.909 0.00 0.00 0.00 2.52
5438 9597 4.689612 AAGACAAACTACCAGAGCAAGA 57.310 40.909 0.00 0.00 0.00 3.02
5439 9598 5.506317 CCAAAAGACAAACTACCAGAGCAAG 60.506 44.000 0.00 0.00 0.00 4.01
5440 9599 4.338118 CCAAAAGACAAACTACCAGAGCAA 59.662 41.667 0.00 0.00 0.00 3.91
5441 9600 3.882888 CCAAAAGACAAACTACCAGAGCA 59.117 43.478 0.00 0.00 0.00 4.26
5442 9601 4.134563 TCCAAAAGACAAACTACCAGAGC 58.865 43.478 0.00 0.00 0.00 4.09
5443 9602 5.611374 TCTCCAAAAGACAAACTACCAGAG 58.389 41.667 0.00 0.00 0.00 3.35
5444 9603 5.623956 TCTCCAAAAGACAAACTACCAGA 57.376 39.130 0.00 0.00 0.00 3.86
5445 9604 6.486657 TCAATCTCCAAAAGACAAACTACCAG 59.513 38.462 0.00 0.00 36.65 4.00
5446 9605 6.361433 TCAATCTCCAAAAGACAAACTACCA 58.639 36.000 0.00 0.00 36.65 3.25
5447 9606 6.877611 TCAATCTCCAAAAGACAAACTACC 57.122 37.500 0.00 0.00 36.65 3.18
5448 9607 8.669243 CCTATCAATCTCCAAAAGACAAACTAC 58.331 37.037 0.00 0.00 36.65 2.73
5449 9608 8.602424 TCCTATCAATCTCCAAAAGACAAACTA 58.398 33.333 0.00 0.00 36.65 2.24
5450 9609 7.461749 TCCTATCAATCTCCAAAAGACAAACT 58.538 34.615 0.00 0.00 36.65 2.66
5451 9610 7.687941 TCCTATCAATCTCCAAAAGACAAAC 57.312 36.000 0.00 0.00 36.65 2.93
5452 9611 8.331740 AGATCCTATCAATCTCCAAAAGACAAA 58.668 33.333 0.00 0.00 36.65 2.83
5453 9612 7.772292 CAGATCCTATCAATCTCCAAAAGACAA 59.228 37.037 0.00 0.00 36.65 3.18
5454 9613 7.278135 CAGATCCTATCAATCTCCAAAAGACA 58.722 38.462 0.00 0.00 36.65 3.41
5455 9614 6.204495 GCAGATCCTATCAATCTCCAAAAGAC 59.796 42.308 0.00 0.00 36.65 3.01
5456 9615 6.126681 TGCAGATCCTATCAATCTCCAAAAGA 60.127 38.462 0.00 0.00 38.72 2.52
5457 9616 6.060136 TGCAGATCCTATCAATCTCCAAAAG 58.940 40.000 0.00 0.00 31.05 2.27
5458 9617 6.005066 TGCAGATCCTATCAATCTCCAAAA 57.995 37.500 0.00 0.00 31.05 2.44
5459 9618 5.367644 TCTGCAGATCCTATCAATCTCCAAA 59.632 40.000 13.74 0.00 31.05 3.28
5460 9619 4.903649 TCTGCAGATCCTATCAATCTCCAA 59.096 41.667 13.74 0.00 31.05 3.53
5461 9620 4.486839 TCTGCAGATCCTATCAATCTCCA 58.513 43.478 13.74 0.00 31.05 3.86
5462 9621 4.527816 ACTCTGCAGATCCTATCAATCTCC 59.472 45.833 18.63 0.00 31.05 3.71
5463 9622 5.726980 ACTCTGCAGATCCTATCAATCTC 57.273 43.478 18.63 0.00 31.05 2.75
5464 9623 6.497624 AAACTCTGCAGATCCTATCAATCT 57.502 37.500 18.63 0.00 33.74 2.40
5465 9624 6.368516 GCTAAACTCTGCAGATCCTATCAATC 59.631 42.308 18.63 0.00 0.00 2.67
5466 9625 6.043012 AGCTAAACTCTGCAGATCCTATCAAT 59.957 38.462 18.63 0.00 0.00 2.57
5467 9626 5.365025 AGCTAAACTCTGCAGATCCTATCAA 59.635 40.000 18.63 0.00 0.00 2.57
5468 9627 4.898265 AGCTAAACTCTGCAGATCCTATCA 59.102 41.667 18.63 0.00 0.00 2.15
5469 9628 5.221422 ACAGCTAAACTCTGCAGATCCTATC 60.221 44.000 18.63 5.98 35.04 2.08
5470 9629 4.653341 ACAGCTAAACTCTGCAGATCCTAT 59.347 41.667 18.63 4.95 35.04 2.57
5471 9630 4.026744 ACAGCTAAACTCTGCAGATCCTA 58.973 43.478 18.63 7.66 35.04 2.94
5472 9631 2.836981 ACAGCTAAACTCTGCAGATCCT 59.163 45.455 18.63 6.84 35.04 3.24
5473 9632 3.258971 ACAGCTAAACTCTGCAGATCC 57.741 47.619 18.63 2.32 35.04 3.36
5474 9633 3.305629 CGAACAGCTAAACTCTGCAGATC 59.694 47.826 18.63 6.72 35.04 2.75
5475 9634 3.257393 CGAACAGCTAAACTCTGCAGAT 58.743 45.455 18.63 5.05 35.04 2.90
5476 9635 2.035961 ACGAACAGCTAAACTCTGCAGA 59.964 45.455 17.19 17.19 35.04 4.26
5477 9636 2.408050 ACGAACAGCTAAACTCTGCAG 58.592 47.619 7.63 7.63 35.04 4.41
5478 9637 2.526304 ACGAACAGCTAAACTCTGCA 57.474 45.000 0.00 0.00 35.04 4.41
5479 9638 4.725169 GCATTACGAACAGCTAAACTCTGC 60.725 45.833 0.00 0.00 35.04 4.26
5480 9639 4.388773 TGCATTACGAACAGCTAAACTCTG 59.611 41.667 0.00 0.00 37.56 3.35
5481 9640 4.566004 TGCATTACGAACAGCTAAACTCT 58.434 39.130 0.00 0.00 0.00 3.24
5482 9641 4.625742 TCTGCATTACGAACAGCTAAACTC 59.374 41.667 0.00 0.00 0.00 3.01
5483 9642 4.389077 GTCTGCATTACGAACAGCTAAACT 59.611 41.667 0.00 0.00 0.00 2.66
5484 9643 4.389077 AGTCTGCATTACGAACAGCTAAAC 59.611 41.667 0.00 0.00 0.00 2.01
5485 9644 4.566004 AGTCTGCATTACGAACAGCTAAA 58.434 39.130 0.00 0.00 0.00 1.85
5486 9645 4.188247 AGTCTGCATTACGAACAGCTAA 57.812 40.909 0.00 0.00 0.00 3.09
5487 9646 3.868757 AGTCTGCATTACGAACAGCTA 57.131 42.857 0.00 0.00 0.00 3.32
5488 9647 2.751166 AGTCTGCATTACGAACAGCT 57.249 45.000 0.00 0.00 0.00 4.24
5489 9648 4.806247 AGAATAGTCTGCATTACGAACAGC 59.194 41.667 0.00 0.00 30.83 4.40
5490 9649 5.172232 CGAGAATAGTCTGCATTACGAACAG 59.828 44.000 0.00 0.00 32.80 3.16
5491 9650 5.034797 CGAGAATAGTCTGCATTACGAACA 58.965 41.667 0.00 0.00 32.80 3.18
5492 9651 5.271625 TCGAGAATAGTCTGCATTACGAAC 58.728 41.667 0.00 0.00 32.80 3.95
5493 9652 5.494632 TCGAGAATAGTCTGCATTACGAA 57.505 39.130 0.00 0.00 32.80 3.85
5494 9653 4.554919 GCTCGAGAATAGTCTGCATTACGA 60.555 45.833 18.75 0.00 32.80 3.43
5495 9654 3.666334 GCTCGAGAATAGTCTGCATTACG 59.334 47.826 18.75 0.00 32.80 3.18
5496 9655 3.666334 CGCTCGAGAATAGTCTGCATTAC 59.334 47.826 18.75 0.00 32.80 1.89
5497 9656 3.853676 GCGCTCGAGAATAGTCTGCATTA 60.854 47.826 18.75 0.00 32.80 1.90
5498 9657 2.736978 CGCTCGAGAATAGTCTGCATT 58.263 47.619 18.75 0.00 32.80 3.56
5499 9658 1.601663 GCGCTCGAGAATAGTCTGCAT 60.602 52.381 18.75 0.00 32.80 3.96
5500 9659 0.248661 GCGCTCGAGAATAGTCTGCA 60.249 55.000 18.75 0.00 32.80 4.41
5501 9660 1.265462 CGCGCTCGAGAATAGTCTGC 61.265 60.000 18.75 5.08 38.10 4.26
5502 9661 0.305009 TCGCGCTCGAGAATAGTCTG 59.695 55.000 18.75 0.00 40.21 3.51
5503 9662 2.691571 TCGCGCTCGAGAATAGTCT 58.308 52.632 18.75 0.00 40.21 3.24
5526 9685 1.070914 GTGTAGGAAGGGGCATCTAGC 59.929 57.143 0.00 0.00 44.65 3.42
5527 9686 1.341531 CGTGTAGGAAGGGGCATCTAG 59.658 57.143 0.00 0.00 0.00 2.43
5528 9687 1.342674 ACGTGTAGGAAGGGGCATCTA 60.343 52.381 0.00 0.00 0.00 1.98
5529 9688 0.617820 ACGTGTAGGAAGGGGCATCT 60.618 55.000 0.00 0.00 0.00 2.90
5530 9689 0.462047 CACGTGTAGGAAGGGGCATC 60.462 60.000 7.58 0.00 0.00 3.91
5531 9690 1.602237 CACGTGTAGGAAGGGGCAT 59.398 57.895 7.58 0.00 0.00 4.40
5532 9691 2.589157 CCACGTGTAGGAAGGGGCA 61.589 63.158 15.65 0.00 0.00 5.36
5533 9692 1.259840 TACCACGTGTAGGAAGGGGC 61.260 60.000 15.65 0.00 0.00 5.80
5534 9693 1.492764 ATACCACGTGTAGGAAGGGG 58.507 55.000 15.65 0.00 31.61 4.79
5535 9694 3.528532 GAAATACCACGTGTAGGAAGGG 58.471 50.000 15.65 0.00 31.61 3.95
5536 9695 3.184541 CGAAATACCACGTGTAGGAAGG 58.815 50.000 15.65 0.00 31.61 3.46
5537 9696 3.841643 ACGAAATACCACGTGTAGGAAG 58.158 45.455 15.65 0.00 41.17 3.46
5538 9697 3.940209 ACGAAATACCACGTGTAGGAA 57.060 42.857 15.65 0.00 41.17 3.36
5539 9698 3.940209 AACGAAATACCACGTGTAGGA 57.060 42.857 15.65 0.00 42.43 2.94
5540 9699 4.240096 AGAAACGAAATACCACGTGTAGG 58.760 43.478 15.65 1.15 42.43 3.18
5541 9700 5.834239 AAGAAACGAAATACCACGTGTAG 57.166 39.130 15.65 2.14 42.43 2.74
5542 9701 6.420588 CAAAAGAAACGAAATACCACGTGTA 58.579 36.000 15.65 7.52 42.43 2.90
5543 9702 5.267776 CAAAAGAAACGAAATACCACGTGT 58.732 37.500 15.65 5.35 42.43 4.49
5544 9703 4.145756 GCAAAAGAAACGAAATACCACGTG 59.854 41.667 9.08 9.08 42.43 4.49
5545 9704 4.035909 AGCAAAAGAAACGAAATACCACGT 59.964 37.500 0.00 0.00 44.57 4.49
5546 9705 4.378616 CAGCAAAAGAAACGAAATACCACG 59.621 41.667 0.00 0.00 0.00 4.94
5547 9706 5.516090 TCAGCAAAAGAAACGAAATACCAC 58.484 37.500 0.00 0.00 0.00 4.16
5548 9707 5.759506 TCAGCAAAAGAAACGAAATACCA 57.240 34.783 0.00 0.00 0.00 3.25
5549 9708 6.863230 GTTTCAGCAAAAGAAACGAAATACC 58.137 36.000 0.00 0.00 43.50 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.