Multiple sequence alignment - TraesCS3A01G356500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G356500 chr3A 100.000 4373 0 0 1 4373 603934759 603930387 0.000000e+00 8076.0
1 TraesCS3A01G356500 chr3A 100.000 404 0 0 4650 5053 603930110 603929707 0.000000e+00 747.0
2 TraesCS3A01G356500 chr3B 95.061 3503 108 24 818 4282 612415361 612411886 0.000000e+00 5450.0
3 TraesCS3A01G356500 chr3B 87.237 854 70 13 1 816 612416246 612415394 0.000000e+00 937.0
4 TraesCS3A01G356500 chr3B 88.333 60 3 4 4283 4340 811448898 811448955 9.080000e-08 69.4
5 TraesCS3A01G356500 chr3D 92.437 2076 89 16 813 2864 461668860 461666829 0.000000e+00 2902.0
6 TraesCS3A01G356500 chr3D 97.946 1412 23 1 2871 4282 461666860 461665455 0.000000e+00 2442.0
7 TraesCS3A01G356500 chr3D 85.035 862 59 19 1 817 461669722 461668886 0.000000e+00 813.0
8 TraesCS3A01G356500 chr2A 89.109 404 42 2 4651 5053 197495461 197495863 7.550000e-138 501.0
9 TraesCS3A01G356500 chr7D 86.667 390 52 0 4650 5039 580485367 580485756 2.790000e-117 433.0
10 TraesCS3A01G356500 chr6D 85.644 404 58 0 4650 5053 303611396 303611799 4.680000e-115 425.0
11 TraesCS3A01G356500 chr1B 85.823 395 55 1 4650 5044 393527447 393527840 7.820000e-113 418.0
12 TraesCS3A01G356500 chr1B 88.333 60 3 4 4284 4341 31381709 31381652 9.080000e-08 69.4
13 TraesCS3A01G356500 chr1D 85.323 402 59 0 4652 5053 423028692 423028291 2.810000e-112 416.0
14 TraesCS3A01G356500 chr1A 98.182 220 4 0 4834 5053 35148675 35148456 7.940000e-103 385.0
15 TraesCS3A01G356500 chrUn 98.113 53 0 1 4282 4334 50645621 50645570 1.940000e-14 91.6
16 TraesCS3A01G356500 chr5D 94.828 58 1 2 4278 4334 76982041 76981985 6.970000e-14 89.8
17 TraesCS3A01G356500 chr2D 96.154 52 2 0 4282 4333 20384023 20384074 9.010000e-13 86.1
18 TraesCS3A01G356500 chr2D 96.226 53 1 1 4282 4333 20386037 20386089 9.010000e-13 86.1
19 TraesCS3A01G356500 chr7B 89.062 64 3 4 4282 4343 704027106 704027167 5.420000e-10 76.8
20 TraesCS3A01G356500 chr5A 85.294 68 6 4 4282 4347 582915286 582915221 3.260000e-07 67.6
21 TraesCS3A01G356500 chr6B 87.931 58 3 4 4285 4340 485476612 485476667 1.170000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G356500 chr3A 603929707 603934759 5052 True 4411.500000 8076 100.000 1 5053 2 chr3A.!!$R1 5052
1 TraesCS3A01G356500 chr3B 612411886 612416246 4360 True 3193.500000 5450 91.149 1 4282 2 chr3B.!!$R1 4281
2 TraesCS3A01G356500 chr3D 461665455 461669722 4267 True 2052.333333 2902 91.806 1 4282 3 chr3D.!!$R1 4281

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
994 1083 0.107606 TTCTCCTCGACTCCTCCTCG 60.108 60.0 0.00 0.0 0.00 4.63 F
1487 1582 0.523072 GTTGAGGCTCGTGTACGGTA 59.477 55.0 10.42 0.0 40.29 4.02 F
1765 1863 0.830648 TCGACCTCATCCACAATCCC 59.169 55.0 0.00 0.0 0.00 3.85 F
3017 3139 2.037772 ACACTACTCCAAAGACTGCCAG 59.962 50.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1897 1995 0.179073 CTGTGAACAGATAGGCCGGG 60.179 60.0 2.18 0.0 46.59 5.73 R
2311 2431 0.603569 TCTCTCGGGAAACTGTCTGC 59.396 55.0 0.00 0.0 38.16 4.26 R
3602 3724 0.040204 CCCCAGGAAGCTCCATTTGT 59.960 55.0 5.21 0.0 39.61 2.83 R
4949 5084 0.028770 CTCCGCTGCTCTACTCTTCG 59.971 60.0 0.00 0.0 0.00 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 56 6.691508 TGCATCTAAGATTGTACGAGCATAT 58.308 36.000 0.34 0.00 0.00 1.78
76 78 8.746530 CATATACAAACGGTACATATAGGACCT 58.253 37.037 0.00 0.00 34.07 3.85
80 82 7.850193 ACAAACGGTACATATAGGACCTTAAA 58.150 34.615 0.00 0.00 0.00 1.52
119 121 3.072468 CAATGGCAGCCACCCTGG 61.072 66.667 19.10 0.00 42.03 4.45
166 168 0.792031 CTTTTTCGCAAATGGCTGCC 59.208 50.000 12.87 12.87 41.67 4.85
183 185 1.078848 CCGGCTGAGGAGTTTGAGG 60.079 63.158 0.00 0.00 0.00 3.86
195 197 3.253432 GGAGTTTGAGGTTGTGGATGTTC 59.747 47.826 0.00 0.00 0.00 3.18
200 202 0.889186 AGGTTGTGGATGTTCACCGC 60.889 55.000 0.00 0.00 36.87 5.68
241 244 4.877378 ACATGAATGTGTTGAGGCATTT 57.123 36.364 0.00 0.00 40.03 2.32
299 306 9.884465 CTTAGCATATAAGAAAGCCAATACAAC 57.116 33.333 0.00 0.00 0.00 3.32
328 335 2.400798 CCTACATGCAGCGCAACG 59.599 61.111 11.47 0.00 43.62 4.10
420 427 2.086869 CACAAACCATCGGCTCAGATT 58.913 47.619 0.00 0.00 0.00 2.40
426 433 3.505386 ACCATCGGCTCAGATTAGATCT 58.495 45.455 0.00 0.00 41.15 2.75
489 509 3.491104 CCCGATAGTAGCACAGTTTCCTC 60.491 52.174 0.00 0.00 0.00 3.71
500 520 5.417580 AGCACAGTTTCCTCAACTTTTTACA 59.582 36.000 0.00 0.00 43.89 2.41
522 542 5.008613 ACATTACAATCATAAATCGCGGCTT 59.991 36.000 6.13 2.11 0.00 4.35
530 550 4.572795 TCATAAATCGCGGCTTGAAACATA 59.427 37.500 6.13 0.00 0.00 2.29
576 597 4.424626 TCAATGAGACGAGTGTTATCAGC 58.575 43.478 0.00 0.00 30.58 4.26
581 602 4.142665 TGAGACGAGTGTTATCAGCTACAC 60.143 45.833 9.09 9.09 43.81 2.90
630 651 1.099689 TCGATGCACACGGTCATAGA 58.900 50.000 13.67 0.00 0.00 1.98
632 653 1.854743 CGATGCACACGGTCATAGAAG 59.145 52.381 7.16 0.00 0.00 2.85
644 665 8.098912 ACACGGTCATAGAAGGTAATAAAAACT 58.901 33.333 0.00 0.00 0.00 2.66
680 701 8.965986 TTACGATGTTTCCATAGATAGAATCG 57.034 34.615 0.00 0.00 0.00 3.34
687 708 6.769134 TTCCATAGATAGAATCGCGGATAA 57.231 37.500 6.13 0.00 0.00 1.75
698 720 2.333926 TCGCGGATAAACACAAGACAG 58.666 47.619 6.13 0.00 0.00 3.51
805 853 4.783764 AAAAACATACTGCTACTTGGCC 57.216 40.909 0.00 0.00 0.00 5.36
828 907 0.980423 TGCATGCTACCACCACTACA 59.020 50.000 20.33 0.00 0.00 2.74
936 1025 4.729918 CCGCTGCCCTGCCTTTCT 62.730 66.667 0.00 0.00 0.00 2.52
938 1027 2.270986 CGCTGCCCTGCCTTTCTTT 61.271 57.895 0.00 0.00 0.00 2.52
939 1028 1.809567 CGCTGCCCTGCCTTTCTTTT 61.810 55.000 0.00 0.00 0.00 2.27
989 1078 2.488347 GCTATCCTTCTCCTCGACTCCT 60.488 54.545 0.00 0.00 0.00 3.69
990 1079 2.358322 ATCCTTCTCCTCGACTCCTC 57.642 55.000 0.00 0.00 0.00 3.71
991 1080 0.256464 TCCTTCTCCTCGACTCCTCC 59.744 60.000 0.00 0.00 0.00 4.30
992 1081 0.257616 CCTTCTCCTCGACTCCTCCT 59.742 60.000 0.00 0.00 0.00 3.69
993 1082 1.675552 CTTCTCCTCGACTCCTCCTC 58.324 60.000 0.00 0.00 0.00 3.71
994 1083 0.107606 TTCTCCTCGACTCCTCCTCG 60.108 60.000 0.00 0.00 0.00 4.63
1163 1258 1.070445 GTCCATGCTCCATCTCTCCTG 59.930 57.143 0.00 0.00 0.00 3.86
1277 1372 4.849310 TAATGCGCGGCACCCTCC 62.849 66.667 8.83 0.00 43.04 4.30
1470 1565 3.637273 GAGGGGTGGTCGGCTGTT 61.637 66.667 0.00 0.00 0.00 3.16
1487 1582 0.523072 GTTGAGGCTCGTGTACGGTA 59.477 55.000 10.42 0.00 40.29 4.02
1488 1583 1.068333 GTTGAGGCTCGTGTACGGTAA 60.068 52.381 10.42 0.00 40.29 2.85
1491 1586 1.517913 GGCTCGTGTACGGTAAGGC 60.518 63.158 4.44 3.74 40.29 4.35
1494 1589 3.242474 CGTGTACGGTAAGGCGCG 61.242 66.667 0.00 0.00 35.37 6.86
1596 1691 2.280457 GCTATGGCTGGCCTCGAC 60.280 66.667 13.05 0.00 36.94 4.20
1719 1817 2.128771 TTGGGGCTTCATAACTCTGC 57.871 50.000 0.00 0.00 0.00 4.26
1722 1820 1.673168 GGGCTTCATAACTCTGCAGG 58.327 55.000 15.13 7.28 0.00 4.85
1757 1855 1.154205 CCATTGCGTCGACCTCATCC 61.154 60.000 10.58 0.00 0.00 3.51
1764 1862 1.802880 CGTCGACCTCATCCACAATCC 60.803 57.143 10.58 0.00 0.00 3.01
1765 1863 0.830648 TCGACCTCATCCACAATCCC 59.169 55.000 0.00 0.00 0.00 3.85
1783 1881 2.154462 CCCTTGCTCGATTGTTCAAGT 58.846 47.619 12.58 0.00 35.42 3.16
1793 1891 4.105486 CGATTGTTCAAGTCTCGATGCTA 58.895 43.478 0.00 0.00 0.00 3.49
1810 1908 4.281898 TGCTACAAGAACTAACCCTTCC 57.718 45.455 0.00 0.00 0.00 3.46
1814 1912 5.411977 GCTACAAGAACTAACCCTTCCTTTC 59.588 44.000 0.00 0.00 0.00 2.62
1897 1995 5.468746 TGCTGTACATGTTGTAGAGGAAAAC 59.531 40.000 2.30 0.00 40.52 2.43
1975 2073 6.054941 TGTGCTATTGGTGGTCATAGTATTG 58.945 40.000 0.00 0.00 0.00 1.90
2009 2107 2.223994 GGGTAGAAATAGACGGACTGCC 60.224 54.545 0.00 0.00 33.75 4.85
2298 2418 5.817296 TCAACATGGTGTATGAGTATGAAGC 59.183 40.000 11.27 0.00 39.21 3.86
2311 2431 3.879295 AGTATGAAGCGAATGGGTCATTG 59.121 43.478 0.00 0.00 33.90 2.82
2321 2441 2.363306 TGGGTCATTGCAGACAGTTT 57.637 45.000 8.22 0.00 40.29 2.66
2359 2479 3.119602 CCTGAGCAAATGTTCCTCATGTG 60.120 47.826 0.00 0.00 42.87 3.21
2390 2510 4.125703 CCATGCTCTCTTATGGTCAAGAC 58.874 47.826 0.00 0.00 39.18 3.01
2460 2581 7.752686 GCTCTAGGAAATGTTTTGTCTGAAATC 59.247 37.037 0.00 0.00 0.00 2.17
2584 2705 9.151471 TCTTCTACAGTTACTCATACAATTTGC 57.849 33.333 0.00 0.00 0.00 3.68
2748 2870 8.084590 ACCTGTCATTTCTAAGTTTTAACTCG 57.915 34.615 0.00 0.00 38.57 4.18
2852 2974 9.504710 CATGTTGAAGAATGAATTGAATCTCTC 57.495 33.333 0.00 0.00 0.00 3.20
2859 2981 6.318144 AGAATGAATTGAATCTCTCGCATTGT 59.682 34.615 0.00 0.00 0.00 2.71
3017 3139 2.037772 ACACTACTCCAAAGACTGCCAG 59.962 50.000 0.00 0.00 0.00 4.85
3074 3196 4.389992 ACATTCGACTACATTTGCACTCTG 59.610 41.667 0.00 0.00 0.00 3.35
3266 3388 6.547141 TCTCAAACATCACTTGGAAGTTCATT 59.453 34.615 5.01 0.00 36.48 2.57
3753 3875 1.454572 ATTCAACAAGCAGCACGCCA 61.455 50.000 0.00 0.00 44.04 5.69
3902 4024 0.676184 ACATCATGATCGACCTCGGG 59.324 55.000 4.86 0.00 40.29 5.14
4035 4157 0.598680 GTATGTCAGCAGGCTAGGCG 60.599 60.000 11.10 7.19 36.08 5.52
4168 4290 6.017934 CGTGATCTGGATATTTGTTACCCTTG 60.018 42.308 0.00 0.00 0.00 3.61
4169 4291 7.054124 GTGATCTGGATATTTGTTACCCTTGA 58.946 38.462 0.00 0.00 0.00 3.02
4170 4292 7.227512 GTGATCTGGATATTTGTTACCCTTGAG 59.772 40.741 0.00 0.00 0.00 3.02
4171 4293 6.884472 TCTGGATATTTGTTACCCTTGAGA 57.116 37.500 0.00 0.00 0.00 3.27
4172 4294 6.650120 TCTGGATATTTGTTACCCTTGAGAC 58.350 40.000 0.00 0.00 0.00 3.36
4173 4295 5.424757 TGGATATTTGTTACCCTTGAGACG 58.575 41.667 0.00 0.00 0.00 4.18
4174 4296 4.814771 GGATATTTGTTACCCTTGAGACGG 59.185 45.833 0.00 0.00 0.00 4.79
4175 4297 3.782656 ATTTGTTACCCTTGAGACGGT 57.217 42.857 0.00 0.00 36.08 4.83
4176 4298 3.564053 TTTGTTACCCTTGAGACGGTT 57.436 42.857 0.00 0.00 33.36 4.44
4177 4299 3.564053 TTGTTACCCTTGAGACGGTTT 57.436 42.857 0.00 0.00 33.36 3.27
4178 4300 2.841215 TGTTACCCTTGAGACGGTTTG 58.159 47.619 0.00 0.00 33.36 2.93
4179 4301 1.534163 GTTACCCTTGAGACGGTTTGC 59.466 52.381 0.00 0.00 33.36 3.68
4180 4302 1.053424 TACCCTTGAGACGGTTTGCT 58.947 50.000 0.00 0.00 33.36 3.91
4256 4391 3.675698 GGTTACTTTGAAGAGAGTCTGCG 59.324 47.826 0.00 0.00 0.00 5.18
4267 4402 0.708918 GAGTCTGCGTTGCTCGTTAC 59.291 55.000 4.16 1.37 42.13 2.50
4283 4418 5.237344 GCTCGTTACTGGCATGATATTCTTT 59.763 40.000 0.00 0.00 0.00 2.52
4284 4419 6.238484 GCTCGTTACTGGCATGATATTCTTTT 60.238 38.462 0.00 0.00 0.00 2.27
4285 4420 7.624360 TCGTTACTGGCATGATATTCTTTTT 57.376 32.000 0.00 0.00 0.00 1.94
4311 4446 2.510691 CGTCAACGGCGGGCTTAT 60.511 61.111 13.24 0.00 35.37 1.73
4312 4447 2.808958 CGTCAACGGCGGGCTTATG 61.809 63.158 13.24 0.18 35.37 1.90
4313 4448 2.822255 TCAACGGCGGGCTTATGC 60.822 61.111 13.24 0.00 38.76 3.14
4323 4458 3.111038 GCTTATGCCGGCCTGAAC 58.889 61.111 26.77 7.09 0.00 3.18
4324 4459 2.481471 GCTTATGCCGGCCTGAACC 61.481 63.158 26.77 3.96 0.00 3.62
4325 4460 1.077787 CTTATGCCGGCCTGAACCA 60.078 57.895 26.77 2.60 0.00 3.67
4326 4461 0.466189 CTTATGCCGGCCTGAACCAT 60.466 55.000 26.77 11.48 0.00 3.55
4327 4462 0.840617 TTATGCCGGCCTGAACCATA 59.159 50.000 26.77 10.32 0.00 2.74
4328 4463 1.064003 TATGCCGGCCTGAACCATAT 58.936 50.000 26.77 9.84 0.00 1.78
4329 4464 1.064003 ATGCCGGCCTGAACCATATA 58.936 50.000 26.77 0.00 0.00 0.86
4330 4465 1.064003 TGCCGGCCTGAACCATATAT 58.936 50.000 26.77 0.00 0.00 0.86
4331 4466 1.423541 TGCCGGCCTGAACCATATATT 59.576 47.619 26.77 0.00 0.00 1.28
4332 4467 2.640332 TGCCGGCCTGAACCATATATTA 59.360 45.455 26.77 0.00 0.00 0.98
4333 4468 3.265737 TGCCGGCCTGAACCATATATTAT 59.734 43.478 26.77 0.00 0.00 1.28
4334 4469 4.263727 TGCCGGCCTGAACCATATATTATT 60.264 41.667 26.77 0.00 0.00 1.40
4335 4470 4.705023 GCCGGCCTGAACCATATATTATTT 59.295 41.667 18.11 0.00 0.00 1.40
4336 4471 5.163652 GCCGGCCTGAACCATATATTATTTC 60.164 44.000 18.11 0.00 0.00 2.17
4337 4472 5.943416 CCGGCCTGAACCATATATTATTTCA 59.057 40.000 0.00 0.00 0.00 2.69
4338 4473 6.603201 CCGGCCTGAACCATATATTATTTCAT 59.397 38.462 0.00 0.00 0.00 2.57
4339 4474 7.773224 CCGGCCTGAACCATATATTATTTCATA 59.227 37.037 0.00 0.00 0.00 2.15
4340 4475 9.173021 CGGCCTGAACCATATATTATTTCATAA 57.827 33.333 0.00 0.00 0.00 1.90
4360 4495 9.607988 TTCATAAAACAGTTTACACAGAAGAGA 57.392 29.630 0.00 0.00 32.04 3.10
4361 4496 9.607988 TCATAAAACAGTTTACACAGAAGAGAA 57.392 29.630 0.00 0.00 32.04 2.87
4366 4501 8.958119 AACAGTTTACACAGAAGAGAATTACA 57.042 30.769 0.00 0.00 0.00 2.41
4367 4502 8.594881 ACAGTTTACACAGAAGAGAATTACAG 57.405 34.615 0.00 0.00 0.00 2.74
4368 4503 8.204836 ACAGTTTACACAGAAGAGAATTACAGT 58.795 33.333 0.00 0.00 0.00 3.55
4369 4504 8.491152 CAGTTTACACAGAAGAGAATTACAGTG 58.509 37.037 0.00 0.00 0.00 3.66
4370 4505 7.657761 AGTTTACACAGAAGAGAATTACAGTGG 59.342 37.037 0.00 0.00 0.00 4.00
4371 4506 4.899502 ACACAGAAGAGAATTACAGTGGG 58.100 43.478 0.00 0.00 0.00 4.61
4372 4507 4.593206 ACACAGAAGAGAATTACAGTGGGA 59.407 41.667 0.00 0.00 0.00 4.37
4668 4803 1.941325 GGTTACAATCTCTCGGCCAG 58.059 55.000 2.24 0.00 0.00 4.85
4669 4804 1.473434 GGTTACAATCTCTCGGCCAGG 60.473 57.143 2.24 0.00 0.00 4.45
4670 4805 0.178068 TTACAATCTCTCGGCCAGGC 59.822 55.000 1.26 1.26 0.00 4.85
4671 4806 0.687757 TACAATCTCTCGGCCAGGCT 60.688 55.000 12.43 0.00 0.00 4.58
4672 4807 1.222936 CAATCTCTCGGCCAGGCTT 59.777 57.895 12.43 0.00 0.00 4.35
4673 4808 1.094073 CAATCTCTCGGCCAGGCTTG 61.094 60.000 12.43 4.48 0.00 4.01
4674 4809 1.267574 AATCTCTCGGCCAGGCTTGA 61.268 55.000 12.43 9.06 0.00 3.02
4675 4810 1.965754 ATCTCTCGGCCAGGCTTGAC 61.966 60.000 12.43 0.00 0.00 3.18
4676 4811 2.922503 TCTCGGCCAGGCTTGACA 60.923 61.111 12.43 0.00 0.00 3.58
4677 4812 2.032528 CTCGGCCAGGCTTGACAA 59.967 61.111 12.43 0.00 0.00 3.18
4678 4813 2.281484 TCGGCCAGGCTTGACAAC 60.281 61.111 12.43 0.00 0.00 3.32
4679 4814 2.594303 CGGCCAGGCTTGACAACA 60.594 61.111 12.43 0.00 0.00 3.33
4680 4815 1.973281 CGGCCAGGCTTGACAACAT 60.973 57.895 12.43 0.00 0.00 2.71
4681 4816 0.676466 CGGCCAGGCTTGACAACATA 60.676 55.000 12.43 0.00 0.00 2.29
4682 4817 1.098050 GGCCAGGCTTGACAACATAG 58.902 55.000 12.43 0.00 0.00 2.23
4683 4818 0.453390 GCCAGGCTTGACAACATAGC 59.547 55.000 3.29 0.00 33.12 2.97
4684 4819 0.729116 CCAGGCTTGACAACATAGCG 59.271 55.000 0.00 0.00 33.96 4.26
4685 4820 0.097674 CAGGCTTGACAACATAGCGC 59.902 55.000 0.00 0.00 33.96 5.92
4686 4821 1.026718 AGGCTTGACAACATAGCGCC 61.027 55.000 2.29 5.89 33.96 6.53
4687 4822 1.429423 GCTTGACAACATAGCGCCC 59.571 57.895 2.29 0.00 0.00 6.13
4688 4823 1.993369 GCTTGACAACATAGCGCCCC 61.993 60.000 2.29 0.00 0.00 5.80
4689 4824 0.676466 CTTGACAACATAGCGCCCCA 60.676 55.000 2.29 0.00 0.00 4.96
4690 4825 0.250945 TTGACAACATAGCGCCCCAA 60.251 50.000 2.29 0.00 0.00 4.12
4691 4826 0.034574 TGACAACATAGCGCCCCAAT 60.035 50.000 2.29 0.00 0.00 3.16
4692 4827 0.663153 GACAACATAGCGCCCCAATC 59.337 55.000 2.29 0.00 0.00 2.67
4693 4828 0.255890 ACAACATAGCGCCCCAATCT 59.744 50.000 2.29 0.00 0.00 2.40
4694 4829 1.488812 ACAACATAGCGCCCCAATCTA 59.511 47.619 2.29 0.00 0.00 1.98
4695 4830 2.146342 CAACATAGCGCCCCAATCTAG 58.854 52.381 2.29 0.00 0.00 2.43
4696 4831 0.687354 ACATAGCGCCCCAATCTAGG 59.313 55.000 2.29 0.00 0.00 3.02
4697 4832 0.976641 CATAGCGCCCCAATCTAGGA 59.023 55.000 2.29 0.00 0.00 2.94
4698 4833 1.066573 CATAGCGCCCCAATCTAGGAG 60.067 57.143 2.29 0.00 0.00 3.69
4699 4834 2.281139 GCGCCCCAATCTAGGAGC 60.281 66.667 0.00 0.00 41.82 4.70
4700 4835 3.106986 GCGCCCCAATCTAGGAGCA 62.107 63.158 0.00 0.00 46.91 4.26
4701 4836 1.070445 CGCCCCAATCTAGGAGCAG 59.930 63.158 0.00 0.00 0.00 4.24
4702 4837 1.228094 GCCCCAATCTAGGAGCAGC 60.228 63.158 0.00 0.00 0.00 5.25
4703 4838 1.070445 CCCCAATCTAGGAGCAGCG 59.930 63.158 0.00 0.00 0.00 5.18
4704 4839 1.402896 CCCCAATCTAGGAGCAGCGA 61.403 60.000 0.00 0.00 0.00 4.93
4705 4840 0.249657 CCCAATCTAGGAGCAGCGAC 60.250 60.000 0.00 0.00 0.00 5.19
4706 4841 0.749649 CCAATCTAGGAGCAGCGACT 59.250 55.000 0.00 0.00 0.00 4.18
4707 4842 1.137872 CCAATCTAGGAGCAGCGACTT 59.862 52.381 0.00 0.00 0.00 3.01
4708 4843 2.419297 CCAATCTAGGAGCAGCGACTTT 60.419 50.000 0.00 0.00 0.00 2.66
4709 4844 2.863137 CAATCTAGGAGCAGCGACTTTC 59.137 50.000 0.00 0.00 0.00 2.62
4710 4845 0.452184 TCTAGGAGCAGCGACTTTCG 59.548 55.000 0.00 0.00 43.89 3.46
4719 4854 3.578456 CGACTTTCGCAGGGCATT 58.422 55.556 0.00 0.00 31.14 3.56
4720 4855 1.425428 CGACTTTCGCAGGGCATTC 59.575 57.895 0.00 0.00 31.14 2.67
4721 4856 1.021390 CGACTTTCGCAGGGCATTCT 61.021 55.000 0.00 0.00 31.14 2.40
4722 4857 1.168714 GACTTTCGCAGGGCATTCTT 58.831 50.000 0.00 0.00 0.00 2.52
4723 4858 0.883833 ACTTTCGCAGGGCATTCTTG 59.116 50.000 0.00 0.00 0.00 3.02
4738 4873 5.381174 CATTCTTGCATCTTTGAGACCAA 57.619 39.130 0.00 0.00 0.00 3.67
4739 4874 5.775686 CATTCTTGCATCTTTGAGACCAAA 58.224 37.500 0.00 0.00 39.74 3.28
4750 4885 2.964740 TGAGACCAAAGCTTCAGATCG 58.035 47.619 0.00 0.00 0.00 3.69
4751 4886 2.300152 TGAGACCAAAGCTTCAGATCGT 59.700 45.455 0.00 0.00 0.00 3.73
4752 4887 2.926838 GAGACCAAAGCTTCAGATCGTC 59.073 50.000 0.00 0.00 0.00 4.20
4753 4888 2.003301 GACCAAAGCTTCAGATCGTCC 58.997 52.381 0.00 0.00 0.00 4.79
4754 4889 1.002366 CCAAAGCTTCAGATCGTCCG 58.998 55.000 0.00 0.00 0.00 4.79
4755 4890 0.371645 CAAAGCTTCAGATCGTCCGC 59.628 55.000 0.00 0.00 0.00 5.54
4756 4891 0.741221 AAAGCTTCAGATCGTCCGCC 60.741 55.000 0.00 0.00 0.00 6.13
4757 4892 2.890847 AAGCTTCAGATCGTCCGCCG 62.891 60.000 0.00 0.00 38.13 6.46
4758 4893 2.956964 CTTCAGATCGTCCGCCGC 60.957 66.667 0.00 0.00 36.19 6.53
4759 4894 3.417275 CTTCAGATCGTCCGCCGCT 62.417 63.158 0.00 0.00 36.19 5.52
4760 4895 2.060004 CTTCAGATCGTCCGCCGCTA 62.060 60.000 0.00 0.00 36.19 4.26
4761 4896 2.332362 TTCAGATCGTCCGCCGCTAC 62.332 60.000 0.00 0.00 36.19 3.58
4762 4897 3.593794 AGATCGTCCGCCGCTACC 61.594 66.667 0.00 0.00 36.19 3.18
4763 4898 4.642542 GATCGTCCGCCGCTACCC 62.643 72.222 0.00 0.00 36.19 3.69
4765 4900 3.779850 ATCGTCCGCCGCTACCCTA 62.780 63.158 0.00 0.00 36.19 3.53
4766 4901 3.962421 CGTCCGCCGCTACCCTAG 61.962 72.222 0.00 0.00 0.00 3.02
4779 4914 4.630644 CTACCCTAGCAATGTGATGGAT 57.369 45.455 0.00 0.00 0.00 3.41
4780 4915 3.219176 ACCCTAGCAATGTGATGGATG 57.781 47.619 0.00 0.00 0.00 3.51
4781 4916 2.511218 ACCCTAGCAATGTGATGGATGT 59.489 45.455 0.00 0.00 0.00 3.06
4782 4917 2.882761 CCCTAGCAATGTGATGGATGTG 59.117 50.000 0.00 0.00 0.00 3.21
4783 4918 3.434024 CCCTAGCAATGTGATGGATGTGA 60.434 47.826 0.00 0.00 0.00 3.58
4784 4919 4.201657 CCTAGCAATGTGATGGATGTGAA 58.798 43.478 0.00 0.00 0.00 3.18
4785 4920 4.275196 CCTAGCAATGTGATGGATGTGAAG 59.725 45.833 0.00 0.00 0.00 3.02
4786 4921 3.021695 AGCAATGTGATGGATGTGAAGG 58.978 45.455 0.00 0.00 0.00 3.46
4787 4922 2.100252 GCAATGTGATGGATGTGAAGGG 59.900 50.000 0.00 0.00 0.00 3.95
4788 4923 3.359033 CAATGTGATGGATGTGAAGGGT 58.641 45.455 0.00 0.00 0.00 4.34
4789 4924 3.744940 ATGTGATGGATGTGAAGGGTT 57.255 42.857 0.00 0.00 0.00 4.11
4790 4925 3.524095 TGTGATGGATGTGAAGGGTTT 57.476 42.857 0.00 0.00 0.00 3.27
4791 4926 3.420893 TGTGATGGATGTGAAGGGTTTC 58.579 45.455 0.00 0.00 0.00 2.78
4792 4927 2.420022 GTGATGGATGTGAAGGGTTTCG 59.580 50.000 0.00 0.00 36.04 3.46
4793 4928 2.039746 TGATGGATGTGAAGGGTTTCGT 59.960 45.455 0.00 0.00 36.04 3.85
4794 4929 1.890876 TGGATGTGAAGGGTTTCGTG 58.109 50.000 0.00 0.00 36.04 4.35
4795 4930 1.142060 TGGATGTGAAGGGTTTCGTGT 59.858 47.619 0.00 0.00 36.04 4.49
4796 4931 1.804748 GGATGTGAAGGGTTTCGTGTC 59.195 52.381 0.00 0.00 36.04 3.67
4797 4932 1.459592 GATGTGAAGGGTTTCGTGTCG 59.540 52.381 0.00 0.00 36.04 4.35
4798 4933 0.460722 TGTGAAGGGTTTCGTGTCGA 59.539 50.000 0.00 0.00 36.04 4.20
4799 4934 1.134759 TGTGAAGGGTTTCGTGTCGAA 60.135 47.619 0.40 0.40 44.28 3.71
4813 4948 2.908817 TCGAAAGACCTTGGCGTTC 58.091 52.632 0.00 0.00 33.31 3.95
4814 4949 0.601841 TCGAAAGACCTTGGCGTTCC 60.602 55.000 0.00 0.00 33.31 3.62
4815 4950 1.866925 GAAAGACCTTGGCGTTCCG 59.133 57.895 0.00 0.00 34.14 4.30
4816 4951 1.574702 GAAAGACCTTGGCGTTCCGG 61.575 60.000 0.00 0.00 34.14 5.14
4827 4962 4.699522 GTTCCGGCGCTTCCAGGT 62.700 66.667 7.64 0.00 32.60 4.00
4828 4963 4.697756 TTCCGGCGCTTCCAGGTG 62.698 66.667 7.64 0.00 32.60 4.00
4831 4966 3.423154 CGGCGCTTCCAGGTGTTC 61.423 66.667 7.64 0.00 34.01 3.18
4832 4967 3.056328 GGCGCTTCCAGGTGTTCC 61.056 66.667 7.64 0.00 34.01 3.62
4833 4968 2.281484 GCGCTTCCAGGTGTTCCA 60.281 61.111 0.00 0.00 35.89 3.53
4834 4969 2.328099 GCGCTTCCAGGTGTTCCAG 61.328 63.158 0.00 0.00 35.89 3.86
4835 4970 1.371183 CGCTTCCAGGTGTTCCAGA 59.629 57.895 0.00 0.00 35.89 3.86
4836 4971 0.250295 CGCTTCCAGGTGTTCCAGAA 60.250 55.000 0.00 0.00 35.89 3.02
4837 4972 1.528129 GCTTCCAGGTGTTCCAGAAG 58.472 55.000 10.58 10.58 43.31 2.85
4838 4973 1.072331 GCTTCCAGGTGTTCCAGAAGA 59.928 52.381 15.96 0.00 43.22 2.87
4839 4974 2.290577 GCTTCCAGGTGTTCCAGAAGAT 60.291 50.000 15.96 0.00 43.22 2.40
4840 4975 3.812167 GCTTCCAGGTGTTCCAGAAGATT 60.812 47.826 15.96 0.00 43.22 2.40
4841 4976 3.423539 TCCAGGTGTTCCAGAAGATTG 57.576 47.619 0.00 0.00 35.89 2.67
4842 4977 1.815003 CCAGGTGTTCCAGAAGATTGC 59.185 52.381 0.00 0.00 35.89 3.56
4843 4978 1.466167 CAGGTGTTCCAGAAGATTGCG 59.534 52.381 0.00 0.00 35.89 4.85
4844 4979 1.347707 AGGTGTTCCAGAAGATTGCGA 59.652 47.619 0.00 0.00 35.89 5.10
4845 4980 2.026822 AGGTGTTCCAGAAGATTGCGAT 60.027 45.455 0.00 0.00 35.89 4.58
4846 4981 2.096496 GGTGTTCCAGAAGATTGCGATG 59.904 50.000 0.00 0.00 0.00 3.84
4847 4982 3.002791 GTGTTCCAGAAGATTGCGATGA 58.997 45.455 0.00 0.00 0.00 2.92
4848 4983 3.063180 GTGTTCCAGAAGATTGCGATGAG 59.937 47.826 0.00 0.00 0.00 2.90
4849 4984 2.609427 TCCAGAAGATTGCGATGAGG 57.391 50.000 0.00 0.00 0.00 3.86
4850 4985 2.110578 TCCAGAAGATTGCGATGAGGA 58.889 47.619 0.00 0.00 0.00 3.71
4851 4986 2.159043 TCCAGAAGATTGCGATGAGGAC 60.159 50.000 0.00 0.00 0.00 3.85
4852 4987 1.857217 CAGAAGATTGCGATGAGGACG 59.143 52.381 0.00 0.00 0.00 4.79
4853 4988 1.202463 AGAAGATTGCGATGAGGACGG 60.202 52.381 0.00 0.00 0.00 4.79
4854 4989 0.537188 AAGATTGCGATGAGGACGGT 59.463 50.000 0.00 0.00 0.00 4.83
4855 4990 0.179100 AGATTGCGATGAGGACGGTG 60.179 55.000 0.00 0.00 0.00 4.94
4856 4991 1.153369 ATTGCGATGAGGACGGTGG 60.153 57.895 0.00 0.00 0.00 4.61
4857 4992 1.613317 ATTGCGATGAGGACGGTGGA 61.613 55.000 0.00 0.00 0.00 4.02
4858 4993 1.822114 TTGCGATGAGGACGGTGGAA 61.822 55.000 0.00 0.00 0.00 3.53
4859 4994 1.810030 GCGATGAGGACGGTGGAAC 60.810 63.158 0.00 0.00 0.00 3.62
4860 4995 1.516386 CGATGAGGACGGTGGAACG 60.516 63.158 0.00 0.00 38.12 3.95
4861 4996 1.888018 GATGAGGACGGTGGAACGA 59.112 57.895 0.00 0.00 38.12 3.85
4862 4997 0.245539 GATGAGGACGGTGGAACGAA 59.754 55.000 0.00 0.00 38.12 3.85
4863 4998 0.037605 ATGAGGACGGTGGAACGAAC 60.038 55.000 0.00 0.00 38.12 3.95
4864 4999 1.111116 TGAGGACGGTGGAACGAACT 61.111 55.000 0.00 0.00 38.12 3.01
4865 5000 0.033090 GAGGACGGTGGAACGAACTT 59.967 55.000 0.00 0.00 38.12 2.66
4866 5001 0.466963 AGGACGGTGGAACGAACTTT 59.533 50.000 0.00 0.00 38.12 2.66
4867 5002 0.584876 GGACGGTGGAACGAACTTTG 59.415 55.000 0.00 0.00 38.12 2.77
4868 5003 1.292992 GACGGTGGAACGAACTTTGT 58.707 50.000 0.00 0.00 38.12 2.83
4869 5004 1.259770 GACGGTGGAACGAACTTTGTC 59.740 52.381 0.00 0.00 38.12 3.18
4870 5005 0.584876 CGGTGGAACGAACTTTGTCC 59.415 55.000 0.00 0.00 38.12 4.02
4871 5006 0.949397 GGTGGAACGAACTTTGTCCC 59.051 55.000 0.00 0.00 38.12 4.46
4872 5007 1.670791 GTGGAACGAACTTTGTCCCA 58.329 50.000 0.00 0.00 0.00 4.37
4873 5008 1.332686 GTGGAACGAACTTTGTCCCAC 59.667 52.381 1.98 1.98 36.27 4.61
4874 5009 0.584876 GGAACGAACTTTGTCCCACG 59.415 55.000 0.00 0.00 0.00 4.94
4875 5010 0.584876 GAACGAACTTTGTCCCACGG 59.415 55.000 0.00 0.00 0.00 4.94
4876 5011 0.816421 AACGAACTTTGTCCCACGGG 60.816 55.000 0.00 0.00 0.00 5.28
4877 5012 1.964373 CGAACTTTGTCCCACGGGG 60.964 63.158 0.00 0.00 46.11 5.73
4878 5013 2.203437 AACTTTGTCCCACGGGGC 60.203 61.111 0.00 0.00 43.94 5.80
4879 5014 3.802852 AACTTTGTCCCACGGGGCC 62.803 63.158 3.77 0.00 43.94 5.80
4880 5015 3.966543 CTTTGTCCCACGGGGCCT 61.967 66.667 3.77 0.00 43.94 5.19
4881 5016 4.278513 TTTGTCCCACGGGGCCTG 62.279 66.667 11.83 11.83 43.94 4.85
4884 5019 4.489771 GTCCCACGGGGCCTGATG 62.490 72.222 21.81 13.30 43.94 3.07
4895 5030 3.149899 GCCTGATGCCAGATATCCG 57.850 57.895 0.00 0.00 43.02 4.18
4896 5031 1.023513 GCCTGATGCCAGATATCCGC 61.024 60.000 0.00 2.18 43.02 5.54
4897 5032 0.738762 CCTGATGCCAGATATCCGCG 60.739 60.000 0.00 0.00 43.02 6.46
4898 5033 0.244721 CTGATGCCAGATATCCGCGA 59.755 55.000 8.23 0.00 43.02 5.87
4899 5034 0.897621 TGATGCCAGATATCCGCGAT 59.102 50.000 8.23 1.39 0.00 4.58
4900 5035 1.284657 GATGCCAGATATCCGCGATG 58.715 55.000 8.23 0.00 0.00 3.84
4901 5036 0.610174 ATGCCAGATATCCGCGATGT 59.390 50.000 8.23 0.00 0.00 3.06
4902 5037 0.392706 TGCCAGATATCCGCGATGTT 59.607 50.000 8.23 0.00 0.00 2.71
4903 5038 0.792640 GCCAGATATCCGCGATGTTG 59.207 55.000 8.23 0.00 0.00 3.33
4904 5039 0.792640 CCAGATATCCGCGATGTTGC 59.207 55.000 8.23 0.00 0.00 4.17
4921 5056 3.608662 CGCGGCGACCCCCTATAA 61.609 66.667 19.16 0.00 0.00 0.98
4922 5057 2.823829 GCGGCGACCCCCTATAAA 59.176 61.111 12.98 0.00 0.00 1.40
4923 5058 1.301479 GCGGCGACCCCCTATAAAG 60.301 63.158 12.98 0.00 0.00 1.85
4924 5059 1.370064 CGGCGACCCCCTATAAAGG 59.630 63.158 0.00 0.00 43.25 3.11
4935 5070 3.477210 CCTATAAAGGGTGTGGAGCTC 57.523 52.381 4.71 4.71 39.48 4.09
4936 5071 2.224066 CCTATAAAGGGTGTGGAGCTCG 60.224 54.545 7.83 0.00 39.48 5.03
4937 5072 1.276622 ATAAAGGGTGTGGAGCTCGT 58.723 50.000 7.83 0.00 0.00 4.18
4938 5073 0.606604 TAAAGGGTGTGGAGCTCGTC 59.393 55.000 7.83 3.71 0.00 4.20
4940 5075 4.083862 GGGTGTGGAGCTCGTCCC 62.084 72.222 7.83 12.29 46.31 4.46
4941 5076 3.311110 GGTGTGGAGCTCGTCCCA 61.311 66.667 7.83 0.00 46.31 4.37
4942 5077 2.262915 GTGTGGAGCTCGTCCCAG 59.737 66.667 7.83 0.00 46.31 4.45
4943 5078 2.117423 TGTGGAGCTCGTCCCAGA 59.883 61.111 7.83 0.00 46.31 3.86
4944 5079 1.979155 TGTGGAGCTCGTCCCAGAG 60.979 63.158 7.83 0.00 46.31 3.35
4953 5088 4.821589 GTCCCAGAGCGGCCGAAG 62.822 72.222 33.48 14.56 0.00 3.79
4955 5090 4.521062 CCCAGAGCGGCCGAAGAG 62.521 72.222 33.48 15.36 0.00 2.85
4956 5091 3.764466 CCAGAGCGGCCGAAGAGT 61.764 66.667 33.48 6.73 0.00 3.24
4957 5092 2.415608 CCAGAGCGGCCGAAGAGTA 61.416 63.158 33.48 0.00 0.00 2.59
4958 5093 1.064946 CAGAGCGGCCGAAGAGTAG 59.935 63.158 33.48 7.17 0.00 2.57
4959 5094 1.077644 AGAGCGGCCGAAGAGTAGA 60.078 57.895 33.48 0.00 0.00 2.59
4960 5095 1.098712 AGAGCGGCCGAAGAGTAGAG 61.099 60.000 33.48 0.00 0.00 2.43
4961 5096 2.278923 GCGGCCGAAGAGTAGAGC 60.279 66.667 33.48 1.90 0.00 4.09
4962 5097 3.064987 GCGGCCGAAGAGTAGAGCA 62.065 63.158 33.48 0.00 0.00 4.26
4963 5098 1.064946 CGGCCGAAGAGTAGAGCAG 59.935 63.158 24.07 0.00 0.00 4.24
4964 5099 1.227118 GGCCGAAGAGTAGAGCAGC 60.227 63.158 0.00 0.00 0.00 5.25
4965 5100 1.587613 GCCGAAGAGTAGAGCAGCG 60.588 63.158 0.00 0.00 0.00 5.18
4966 5101 1.064946 CCGAAGAGTAGAGCAGCGG 59.935 63.158 0.00 0.00 0.00 5.52
4967 5102 1.377366 CCGAAGAGTAGAGCAGCGGA 61.377 60.000 0.00 0.00 39.62 5.54
4968 5103 0.028770 CGAAGAGTAGAGCAGCGGAG 59.971 60.000 0.00 0.00 0.00 4.63
4969 5104 1.384525 GAAGAGTAGAGCAGCGGAGA 58.615 55.000 0.00 0.00 0.00 3.71
4970 5105 1.746220 GAAGAGTAGAGCAGCGGAGAA 59.254 52.381 0.00 0.00 0.00 2.87
4971 5106 1.388547 AGAGTAGAGCAGCGGAGAAG 58.611 55.000 0.00 0.00 0.00 2.85
4972 5107 1.065053 AGAGTAGAGCAGCGGAGAAGA 60.065 52.381 0.00 0.00 0.00 2.87
4973 5108 1.746220 GAGTAGAGCAGCGGAGAAGAA 59.254 52.381 0.00 0.00 0.00 2.52
4974 5109 1.748493 AGTAGAGCAGCGGAGAAGAAG 59.252 52.381 0.00 0.00 0.00 2.85
4975 5110 1.107114 TAGAGCAGCGGAGAAGAAGG 58.893 55.000 0.00 0.00 0.00 3.46
4976 5111 0.902516 AGAGCAGCGGAGAAGAAGGT 60.903 55.000 0.00 0.00 0.00 3.50
4977 5112 0.739112 GAGCAGCGGAGAAGAAGGTG 60.739 60.000 0.00 0.00 36.57 4.00
4978 5113 1.188219 AGCAGCGGAGAAGAAGGTGA 61.188 55.000 0.00 0.00 35.63 4.02
4979 5114 0.739112 GCAGCGGAGAAGAAGGTGAG 60.739 60.000 0.00 0.00 35.63 3.51
4980 5115 0.605589 CAGCGGAGAAGAAGGTGAGT 59.394 55.000 0.00 0.00 35.63 3.41
4981 5116 0.605589 AGCGGAGAAGAAGGTGAGTG 59.394 55.000 0.00 0.00 0.00 3.51
4982 5117 0.603569 GCGGAGAAGAAGGTGAGTGA 59.396 55.000 0.00 0.00 0.00 3.41
4983 5118 1.205893 GCGGAGAAGAAGGTGAGTGAT 59.794 52.381 0.00 0.00 0.00 3.06
4984 5119 2.427453 GCGGAGAAGAAGGTGAGTGATA 59.573 50.000 0.00 0.00 0.00 2.15
4985 5120 3.068873 GCGGAGAAGAAGGTGAGTGATAT 59.931 47.826 0.00 0.00 0.00 1.63
4986 5121 4.794655 GCGGAGAAGAAGGTGAGTGATATC 60.795 50.000 0.00 0.00 0.00 1.63
4987 5122 4.261825 CGGAGAAGAAGGTGAGTGATATCC 60.262 50.000 0.00 0.00 0.00 2.59
4988 5123 4.898861 GGAGAAGAAGGTGAGTGATATCCT 59.101 45.833 0.00 0.00 0.00 3.24
4989 5124 5.010617 GGAGAAGAAGGTGAGTGATATCCTC 59.989 48.000 12.00 12.00 0.00 3.71
4990 5125 4.582656 AGAAGAAGGTGAGTGATATCCTCG 59.417 45.833 13.32 0.00 0.00 4.63
4991 5126 2.625790 AGAAGGTGAGTGATATCCTCGC 59.374 50.000 18.83 18.83 38.45 5.03
4992 5127 2.073252 AGGTGAGTGATATCCTCGCA 57.927 50.000 24.08 13.68 40.42 5.10
4993 5128 1.959985 AGGTGAGTGATATCCTCGCAG 59.040 52.381 24.08 0.00 40.42 5.18
4994 5129 1.000283 GGTGAGTGATATCCTCGCAGG 60.000 57.143 24.08 0.00 40.42 4.85
4995 5130 1.683917 GTGAGTGATATCCTCGCAGGT 59.316 52.381 20.70 0.00 38.89 4.00
4996 5131 1.683385 TGAGTGATATCCTCGCAGGTG 59.317 52.381 13.32 0.00 36.53 4.00
4997 5132 0.390860 AGTGATATCCTCGCAGGTGC 59.609 55.000 0.00 0.00 36.53 5.01
4998 5133 0.601311 GTGATATCCTCGCAGGTGCC 60.601 60.000 0.00 0.00 36.53 5.01
4999 5134 1.373497 GATATCCTCGCAGGTGCCG 60.373 63.158 0.00 0.00 36.53 5.69
5000 5135 3.521529 ATATCCTCGCAGGTGCCGC 62.522 63.158 0.00 0.00 36.53 6.53
5016 5151 3.512516 GCAGAACGGGCAGGCATC 61.513 66.667 0.00 0.00 0.00 3.91
5017 5152 2.046023 CAGAACGGGCAGGCATCA 60.046 61.111 0.00 0.00 0.00 3.07
5018 5153 2.110967 CAGAACGGGCAGGCATCAG 61.111 63.158 0.00 0.00 0.00 2.90
5019 5154 2.268920 GAACGGGCAGGCATCAGA 59.731 61.111 0.00 0.00 0.00 3.27
5020 5155 1.817099 GAACGGGCAGGCATCAGAG 60.817 63.158 0.00 0.00 0.00 3.35
5021 5156 3.335356 AACGGGCAGGCATCAGAGG 62.335 63.158 0.00 0.00 0.00 3.69
5022 5157 3.473647 CGGGCAGGCATCAGAGGA 61.474 66.667 0.00 0.00 0.00 3.71
5023 5158 3.001514 GGGCAGGCATCAGAGGAA 58.998 61.111 0.00 0.00 0.00 3.36
5024 5159 1.153005 GGGCAGGCATCAGAGGAAG 60.153 63.158 0.00 0.00 0.00 3.46
5025 5160 1.823041 GGCAGGCATCAGAGGAAGC 60.823 63.158 0.00 0.00 37.03 3.86
5026 5161 2.178890 GCAGGCATCAGAGGAAGCG 61.179 63.158 0.00 0.00 38.59 4.68
5027 5162 1.519246 CAGGCATCAGAGGAAGCGA 59.481 57.895 0.00 0.00 38.59 4.93
5028 5163 0.106335 CAGGCATCAGAGGAAGCGAT 59.894 55.000 0.00 0.00 38.59 4.58
5029 5164 0.835941 AGGCATCAGAGGAAGCGATT 59.164 50.000 0.00 0.00 38.59 3.34
5030 5165 0.942962 GGCATCAGAGGAAGCGATTG 59.057 55.000 0.00 0.00 38.59 2.67
5031 5166 1.473965 GGCATCAGAGGAAGCGATTGA 60.474 52.381 0.00 0.00 38.59 2.57
5032 5167 1.865970 GCATCAGAGGAAGCGATTGAG 59.134 52.381 0.00 0.00 0.00 3.02
5033 5168 1.865970 CATCAGAGGAAGCGATTGAGC 59.134 52.381 0.00 0.00 37.41 4.26
5034 5169 0.179127 TCAGAGGAAGCGATTGAGCG 60.179 55.000 0.00 0.00 43.00 5.03
5035 5170 0.179127 CAGAGGAAGCGATTGAGCGA 60.179 55.000 0.00 0.00 43.00 4.93
5036 5171 0.179124 AGAGGAAGCGATTGAGCGAC 60.179 55.000 0.00 0.00 43.00 5.19
5037 5172 1.475441 GAGGAAGCGATTGAGCGACG 61.475 60.000 0.00 0.00 43.00 5.12
5042 5177 2.395690 CGATTGAGCGACGCAACC 59.604 61.111 23.70 11.07 0.00 3.77
5043 5178 2.094659 CGATTGAGCGACGCAACCT 61.095 57.895 23.70 0.00 0.00 3.50
5044 5179 0.800683 CGATTGAGCGACGCAACCTA 60.801 55.000 23.70 7.96 0.00 3.08
5045 5180 0.645868 GATTGAGCGACGCAACCTAC 59.354 55.000 23.70 4.96 0.00 3.18
5046 5181 1.076533 ATTGAGCGACGCAACCTACG 61.077 55.000 23.70 0.00 0.00 3.51
5049 5184 3.542742 GCGACGCAACCTACGCTC 61.543 66.667 16.42 0.00 46.06 5.03
5050 5185 2.126618 CGACGCAACCTACGCTCA 60.127 61.111 0.00 0.00 0.00 4.26
5051 5186 1.516386 CGACGCAACCTACGCTCAT 60.516 57.895 0.00 0.00 0.00 2.90
5052 5187 1.076533 CGACGCAACCTACGCTCATT 61.077 55.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 7.556635 ACAATCTTAGATGCATATGGATGGATG 59.443 37.037 15.13 11.22 43.55 3.51
54 56 8.532186 TTAAGGTCCTATATGTACCGTTTGTA 57.468 34.615 0.00 0.00 38.37 2.41
119 121 3.125316 CGAAATAGCTGTTCTGGTGTTCC 59.875 47.826 0.00 0.00 0.00 3.62
133 135 4.091509 TGCGAAAAAGAGACTCGAAATAGC 59.908 41.667 0.00 1.88 34.52 2.97
166 168 0.035458 AACCTCAAACTCCTCAGCCG 59.965 55.000 0.00 0.00 0.00 5.52
183 185 0.040425 GTGCGGTGAACATCCACAAC 60.040 55.000 0.00 0.00 38.74 3.32
195 197 4.988598 ACTCGGGCTTGTGCGGTG 62.989 66.667 0.00 0.00 40.82 4.94
299 306 1.516161 CATGTAGGGCCATGATCACG 58.484 55.000 6.18 0.00 43.99 4.35
335 342 1.279840 GTGGTTTCTGTGCTCGTGC 59.720 57.895 1.71 1.71 40.20 5.34
370 377 1.465777 TCTCGCGAGTTCGTCAATGTA 59.534 47.619 33.33 8.82 42.22 2.29
420 427 3.262420 GTTTGCTCCTTTGCGAGATCTA 58.738 45.455 0.00 0.00 35.36 1.98
426 433 0.030638 GCTTGTTTGCTCCTTTGCGA 59.969 50.000 0.00 0.00 35.36 5.10
469 489 4.371855 TGAGGAAACTGTGCTACTATCG 57.628 45.455 0.00 0.00 44.43 2.92
500 520 5.238432 TCAAGCCGCGATTTATGATTGTAAT 59.762 36.000 8.23 0.00 0.00 1.89
556 577 4.727507 AGCTGATAACACTCGTCTCATT 57.272 40.909 0.00 0.00 0.00 2.57
558 579 4.007659 TGTAGCTGATAACACTCGTCTCA 58.992 43.478 0.00 0.00 0.00 3.27
576 597 2.499685 GGCGCTACCCTGGTGTAG 59.500 66.667 7.64 14.42 40.96 2.74
597 618 0.039074 CATCGACCGATGTAGAGGCC 60.039 60.000 20.56 0.00 44.93 5.19
644 665 6.925211 TGGAAACATCGTAATTATTTTGCCA 58.075 32.000 0.00 0.00 33.40 4.92
680 701 3.746492 AGAACTGTCTTGTGTTTATCCGC 59.254 43.478 0.00 0.00 0.00 5.54
687 708 5.336451 GGTTTTTGGAGAACTGTCTTGTGTT 60.336 40.000 0.00 0.00 32.80 3.32
698 720 2.959030 AGCTCTTGGGTTTTTGGAGAAC 59.041 45.455 0.00 0.00 0.00 3.01
795 843 0.171903 CATGCAACAGGCCAAGTAGC 59.828 55.000 5.01 2.47 43.89 3.58
805 853 0.523072 GTGGTGGTAGCATGCAACAG 59.477 55.000 21.98 0.00 0.00 3.16
933 1022 7.663493 GGAGGAGAGATCAAGAAAAGAAAAGAA 59.337 37.037 0.00 0.00 0.00 2.52
934 1023 7.164803 GGAGGAGAGATCAAGAAAAGAAAAGA 58.835 38.462 0.00 0.00 0.00 2.52
935 1024 6.091986 CGGAGGAGAGATCAAGAAAAGAAAAG 59.908 42.308 0.00 0.00 0.00 2.27
936 1025 5.934625 CGGAGGAGAGATCAAGAAAAGAAAA 59.065 40.000 0.00 0.00 0.00 2.29
938 1027 5.078411 CGGAGGAGAGATCAAGAAAAGAA 57.922 43.478 0.00 0.00 0.00 2.52
939 1028 4.727507 CGGAGGAGAGATCAAGAAAAGA 57.272 45.455 0.00 0.00 0.00 2.52
989 1078 2.571757 GTGCCATGACGACGAGGA 59.428 61.111 0.00 0.00 0.00 3.71
990 1079 2.509336 GGTGCCATGACGACGAGG 60.509 66.667 0.00 0.00 0.00 4.63
991 1080 2.094659 GTGGTGCCATGACGACGAG 61.095 63.158 0.00 0.00 0.00 4.18
992 1081 2.048597 GTGGTGCCATGACGACGA 60.049 61.111 0.00 0.00 0.00 4.20
993 1082 2.048222 AGTGGTGCCATGACGACG 60.048 61.111 0.00 0.00 30.47 5.12
994 1083 1.005037 TCAGTGGTGCCATGACGAC 60.005 57.895 0.00 0.00 0.00 4.34
1163 1258 1.071857 ACCAGGGAGACGGAAAGAAAC 59.928 52.381 0.00 0.00 0.00 2.78
1469 1564 1.200716 CTTACCGTACACGAGCCTCAA 59.799 52.381 2.76 0.00 43.02 3.02
1470 1565 0.806868 CTTACCGTACACGAGCCTCA 59.193 55.000 2.76 0.00 43.02 3.86
1526 1621 3.489398 CCCTCGGAGAACAATCTAGAACG 60.489 52.174 6.58 0.00 35.54 3.95
1528 1623 2.431057 GCCCTCGGAGAACAATCTAGAA 59.569 50.000 6.58 0.00 35.54 2.10
1531 1626 1.480954 GTGCCCTCGGAGAACAATCTA 59.519 52.381 6.58 0.00 35.54 1.98
1719 1817 1.447317 GGCACAACTGACACCACCTG 61.447 60.000 0.00 0.00 0.00 4.00
1722 1820 0.823356 ATGGGCACAACTGACACCAC 60.823 55.000 0.00 0.00 0.00 4.16
1757 1855 2.838386 CAATCGAGCAAGGGATTGTG 57.162 50.000 5.77 0.00 42.75 3.33
1764 1862 3.070018 AGACTTGAACAATCGAGCAAGG 58.930 45.455 14.76 0.00 40.28 3.61
1765 1863 3.181536 CGAGACTTGAACAATCGAGCAAG 60.182 47.826 0.00 0.00 40.28 4.01
1783 1881 4.142227 GGGTTAGTTCTTGTAGCATCGAGA 60.142 45.833 0.00 0.00 0.00 4.04
1793 1891 4.415846 AGGAAAGGAAGGGTTAGTTCTTGT 59.584 41.667 0.00 0.00 0.00 3.16
1810 1908 5.443185 TCACATGCTTCAGAAAAGGAAAG 57.557 39.130 0.00 0.00 0.00 2.62
1814 1912 4.843220 ACTTCACATGCTTCAGAAAAGG 57.157 40.909 0.00 0.00 0.00 3.11
1897 1995 0.179073 CTGTGAACAGATAGGCCGGG 60.179 60.000 2.18 0.00 46.59 5.73
1975 2073 9.043079 GTCTATTTCTACCCAAATAGTAGCAAC 57.957 37.037 11.06 1.52 43.00 4.17
2009 2107 6.428159 AGCCACAGTAACTGTCTTCTAAATTG 59.572 38.462 0.00 0.00 43.43 2.32
2298 2418 1.399440 CTGTCTGCAATGACCCATTCG 59.601 52.381 3.85 0.00 36.21 3.34
2311 2431 0.603569 TCTCTCGGGAAACTGTCTGC 59.396 55.000 0.00 0.00 38.16 4.26
2342 2462 1.273048 TGCCACATGAGGAACATTTGC 59.727 47.619 13.99 0.00 35.92 3.68
2390 2510 3.745975 TGTCTAAGGACTTGCGAAACATG 59.254 43.478 0.00 0.00 42.54 3.21
2460 2581 6.480320 AGCACTCAGTTTAAAGAGTTGTGTAG 59.520 38.462 7.24 0.00 42.87 2.74
2523 2644 2.882761 ACGAGTAAATCATCGATCCGGA 59.117 45.455 6.61 6.61 41.40 5.14
2524 2645 3.284323 ACGAGTAAATCATCGATCCGG 57.716 47.619 0.00 0.00 41.40 5.14
2564 2685 9.463443 GAAAAAGCAAATTGTATGAGTAACTGT 57.537 29.630 0.00 0.00 0.00 3.55
2748 2870 7.015779 AGGAAGAAGATACCTAATCCTTACAGC 59.984 40.741 0.00 0.00 34.90 4.40
2852 2974 2.937469 TCCCATGCTTTTACAATGCG 57.063 45.000 0.00 0.00 34.56 4.73
2859 2981 6.440010 TCCAATTCATTCTTCCCATGCTTTTA 59.560 34.615 0.00 0.00 0.00 1.52
2963 3085 4.098349 ACAACAGATTGCAGTGTCACAATT 59.902 37.500 5.62 0.00 39.66 2.32
3017 3139 6.481644 ACATCTTGAAGACTGACTCAAAGTTC 59.518 38.462 0.00 0.00 0.00 3.01
3074 3196 2.764572 TCTTGAGAAGTCCCCGGTAATC 59.235 50.000 0.00 0.00 0.00 1.75
3136 3258 2.027285 TGATCCTCCAACGCAAGAATCA 60.027 45.455 0.00 0.00 43.62 2.57
3602 3724 0.040204 CCCCAGGAAGCTCCATTTGT 59.960 55.000 5.21 0.00 39.61 2.83
3753 3875 2.047274 CACCACCATTCTCGCCGT 60.047 61.111 0.00 0.00 0.00 5.68
3848 3970 0.178987 AGGCGTAGATGATCCTCGGT 60.179 55.000 8.44 0.00 0.00 4.69
3902 4024 0.600255 CCCGTTCTCTGTGTGTGTCC 60.600 60.000 0.00 0.00 0.00 4.02
3995 4117 1.598130 GCAAAGCACGTCCCTCTGT 60.598 57.895 0.00 0.00 0.00 3.41
4035 4157 5.575599 GAGAATCACTCCGGCAATTTGCC 62.576 52.174 27.23 27.23 46.83 4.52
4168 4290 0.179215 CAATCGCAGCAAACCGTCTC 60.179 55.000 0.00 0.00 0.00 3.36
4169 4291 0.884704 ACAATCGCAGCAAACCGTCT 60.885 50.000 0.00 0.00 0.00 4.18
4170 4292 0.040425 AACAATCGCAGCAAACCGTC 60.040 50.000 0.00 0.00 0.00 4.79
4171 4293 1.231221 TAACAATCGCAGCAAACCGT 58.769 45.000 0.00 0.00 0.00 4.83
4172 4294 2.542766 ATAACAATCGCAGCAAACCG 57.457 45.000 0.00 0.00 0.00 4.44
4173 4295 2.923020 CCAATAACAATCGCAGCAAACC 59.077 45.455 0.00 0.00 0.00 3.27
4174 4296 3.574614 ACCAATAACAATCGCAGCAAAC 58.425 40.909 0.00 0.00 0.00 2.93
4175 4297 3.932545 ACCAATAACAATCGCAGCAAA 57.067 38.095 0.00 0.00 0.00 3.68
4176 4298 5.574891 AATACCAATAACAATCGCAGCAA 57.425 34.783 0.00 0.00 0.00 3.91
4177 4299 6.875948 ATAATACCAATAACAATCGCAGCA 57.124 33.333 0.00 0.00 0.00 4.41
4178 4300 9.672086 TTTAATAATACCAATAACAATCGCAGC 57.328 29.630 0.00 0.00 0.00 5.25
4256 4391 1.438651 TCATGCCAGTAACGAGCAAC 58.561 50.000 0.00 0.00 40.46 4.17
4294 4429 2.510691 ATAAGCCCGCCGTTGACG 60.511 61.111 0.00 0.00 39.44 4.35
4295 4430 3.098555 CATAAGCCCGCCGTTGAC 58.901 61.111 0.00 0.00 0.00 3.18
4296 4431 2.822255 GCATAAGCCCGCCGTTGA 60.822 61.111 0.00 0.00 33.58 3.18
4306 4441 2.481471 GGTTCAGGCCGGCATAAGC 61.481 63.158 30.85 22.76 41.10 3.09
4307 4442 0.466189 ATGGTTCAGGCCGGCATAAG 60.466 55.000 30.85 10.95 0.00 1.73
4308 4443 0.840617 TATGGTTCAGGCCGGCATAA 59.159 50.000 30.85 16.06 0.00 1.90
4309 4444 1.064003 ATATGGTTCAGGCCGGCATA 58.936 50.000 30.85 15.74 0.00 3.14
4310 4445 1.064003 TATATGGTTCAGGCCGGCAT 58.936 50.000 30.85 21.35 0.00 4.40
4311 4446 1.064003 ATATATGGTTCAGGCCGGCA 58.936 50.000 30.85 4.32 0.00 5.69
4312 4447 2.200373 AATATATGGTTCAGGCCGGC 57.800 50.000 21.18 21.18 0.00 6.13
4313 4448 5.943416 TGAAATAATATATGGTTCAGGCCGG 59.057 40.000 0.00 0.00 0.00 6.13
4314 4449 7.630242 ATGAAATAATATATGGTTCAGGCCG 57.370 36.000 0.00 0.00 32.13 6.13
4334 4469 9.607988 TCTCTTCTGTGTAAACTGTTTTATGAA 57.392 29.630 11.48 8.35 29.82 2.57
4335 4470 9.607988 TTCTCTTCTGTGTAAACTGTTTTATGA 57.392 29.630 11.48 1.41 29.82 2.15
4340 4475 9.391006 TGTAATTCTCTTCTGTGTAAACTGTTT 57.609 29.630 10.98 10.98 0.00 2.83
4341 4476 8.958119 TGTAATTCTCTTCTGTGTAAACTGTT 57.042 30.769 0.00 0.00 0.00 3.16
4342 4477 8.204836 ACTGTAATTCTCTTCTGTGTAAACTGT 58.795 33.333 0.00 0.00 0.00 3.55
4343 4478 8.491152 CACTGTAATTCTCTTCTGTGTAAACTG 58.509 37.037 0.00 0.00 0.00 3.16
4344 4479 7.657761 CCACTGTAATTCTCTTCTGTGTAAACT 59.342 37.037 0.00 0.00 0.00 2.66
4345 4480 7.095187 CCCACTGTAATTCTCTTCTGTGTAAAC 60.095 40.741 0.00 0.00 0.00 2.01
4346 4481 6.934645 CCCACTGTAATTCTCTTCTGTGTAAA 59.065 38.462 0.00 0.00 0.00 2.01
4347 4482 6.269077 TCCCACTGTAATTCTCTTCTGTGTAA 59.731 38.462 0.00 0.00 0.00 2.41
4348 4483 5.778241 TCCCACTGTAATTCTCTTCTGTGTA 59.222 40.000 0.00 0.00 0.00 2.90
4349 4484 4.593206 TCCCACTGTAATTCTCTTCTGTGT 59.407 41.667 0.00 0.00 0.00 3.72
4350 4485 5.152623 TCCCACTGTAATTCTCTTCTGTG 57.847 43.478 0.00 0.00 0.00 3.66
4649 4784 1.473434 CCTGGCCGAGAGATTGTAACC 60.473 57.143 0.00 0.00 0.00 2.85
4650 4785 1.941325 CCTGGCCGAGAGATTGTAAC 58.059 55.000 0.00 0.00 0.00 2.50
4651 4786 0.178068 GCCTGGCCGAGAGATTGTAA 59.822 55.000 7.66 0.00 0.00 2.41
4652 4787 0.687757 AGCCTGGCCGAGAGATTGTA 60.688 55.000 16.57 0.00 0.00 2.41
4653 4788 1.557269 AAGCCTGGCCGAGAGATTGT 61.557 55.000 16.57 0.00 0.00 2.71
4654 4789 1.094073 CAAGCCTGGCCGAGAGATTG 61.094 60.000 16.57 7.63 0.00 2.67
4655 4790 1.222936 CAAGCCTGGCCGAGAGATT 59.777 57.895 16.57 0.00 0.00 2.40
4656 4791 1.687146 TCAAGCCTGGCCGAGAGAT 60.687 57.895 16.57 0.00 0.00 2.75
4657 4792 2.283894 TCAAGCCTGGCCGAGAGA 60.284 61.111 16.57 3.52 0.00 3.10
4658 4793 2.125350 GTCAAGCCTGGCCGAGAG 60.125 66.667 16.57 0.90 0.00 3.20
4659 4794 2.515979 TTGTCAAGCCTGGCCGAGA 61.516 57.895 16.57 8.31 0.00 4.04
4660 4795 2.032528 TTGTCAAGCCTGGCCGAG 59.967 61.111 16.57 5.62 0.00 4.63
4661 4796 2.281484 GTTGTCAAGCCTGGCCGA 60.281 61.111 16.57 9.87 0.00 5.54
4662 4797 0.676466 TATGTTGTCAAGCCTGGCCG 60.676 55.000 16.57 7.27 0.00 6.13
4663 4798 1.098050 CTATGTTGTCAAGCCTGGCC 58.902 55.000 16.57 0.00 0.00 5.36
4664 4799 0.453390 GCTATGTTGTCAAGCCTGGC 59.547 55.000 11.65 11.65 0.00 4.85
4665 4800 0.729116 CGCTATGTTGTCAAGCCTGG 59.271 55.000 0.00 0.00 32.50 4.45
4666 4801 0.097674 GCGCTATGTTGTCAAGCCTG 59.902 55.000 0.00 0.00 32.50 4.85
4667 4802 1.026718 GGCGCTATGTTGTCAAGCCT 61.027 55.000 7.64 0.00 39.92 4.58
4668 4803 1.429423 GGCGCTATGTTGTCAAGCC 59.571 57.895 7.64 0.00 36.08 4.35
4669 4804 1.429423 GGGCGCTATGTTGTCAAGC 59.571 57.895 7.64 0.00 0.00 4.01
4670 4805 0.676466 TGGGGCGCTATGTTGTCAAG 60.676 55.000 7.64 0.00 0.00 3.02
4671 4806 0.250945 TTGGGGCGCTATGTTGTCAA 60.251 50.000 7.64 0.00 0.00 3.18
4672 4807 0.034574 ATTGGGGCGCTATGTTGTCA 60.035 50.000 7.64 0.00 0.00 3.58
4673 4808 0.663153 GATTGGGGCGCTATGTTGTC 59.337 55.000 7.64 0.00 0.00 3.18
4674 4809 0.255890 AGATTGGGGCGCTATGTTGT 59.744 50.000 7.64 0.00 0.00 3.32
4675 4810 2.146342 CTAGATTGGGGCGCTATGTTG 58.854 52.381 7.64 0.00 0.00 3.33
4676 4811 1.072331 CCTAGATTGGGGCGCTATGTT 59.928 52.381 7.64 0.00 0.00 2.71
4677 4812 0.687354 CCTAGATTGGGGCGCTATGT 59.313 55.000 7.64 2.00 0.00 2.29
4678 4813 0.976641 TCCTAGATTGGGGCGCTATG 59.023 55.000 7.64 0.00 0.00 2.23
4679 4814 1.270907 CTCCTAGATTGGGGCGCTAT 58.729 55.000 7.64 0.00 0.00 2.97
4680 4815 1.472662 GCTCCTAGATTGGGGCGCTA 61.473 60.000 7.64 0.00 44.41 4.26
4681 4816 2.812619 GCTCCTAGATTGGGGCGCT 61.813 63.158 7.64 0.00 44.41 5.92
4682 4817 2.281139 GCTCCTAGATTGGGGCGC 60.281 66.667 0.00 0.00 44.41 6.53
4685 4820 1.070445 CGCTGCTCCTAGATTGGGG 59.930 63.158 0.00 0.00 0.00 4.96
4686 4821 0.249657 GTCGCTGCTCCTAGATTGGG 60.250 60.000 0.00 0.00 0.00 4.12
4687 4822 0.749649 AGTCGCTGCTCCTAGATTGG 59.250 55.000 0.00 0.00 0.00 3.16
4688 4823 2.593346 AAGTCGCTGCTCCTAGATTG 57.407 50.000 0.00 0.00 0.00 2.67
4689 4824 2.480416 CGAAAGTCGCTGCTCCTAGATT 60.480 50.000 0.00 0.00 31.14 2.40
4690 4825 1.066303 CGAAAGTCGCTGCTCCTAGAT 59.934 52.381 0.00 0.00 31.14 1.98
4691 4826 0.452184 CGAAAGTCGCTGCTCCTAGA 59.548 55.000 0.00 0.00 31.14 2.43
4692 4827 2.950877 CGAAAGTCGCTGCTCCTAG 58.049 57.895 0.00 0.00 31.14 3.02
4702 4837 1.021390 AGAATGCCCTGCGAAAGTCG 61.021 55.000 0.00 0.00 43.89 4.18
4703 4838 1.135575 CAAGAATGCCCTGCGAAAGTC 60.136 52.381 0.00 0.00 0.00 3.01
4704 4839 0.883833 CAAGAATGCCCTGCGAAAGT 59.116 50.000 0.00 0.00 0.00 2.66
4705 4840 3.708195 CAAGAATGCCCTGCGAAAG 57.292 52.632 0.00 0.00 0.00 2.62
4714 4849 8.675883 TTTGGTCTCAAAGATGCAAGAATGCC 62.676 42.308 0.00 0.00 43.36 4.40
4715 4850 5.794507 TTTGGTCTCAAAGATGCAAGAATGC 60.795 40.000 0.00 0.00 43.80 3.56
4716 4851 5.381174 TTGGTCTCAAAGATGCAAGAATG 57.619 39.130 0.00 0.00 0.00 2.67
4728 4863 3.748048 CGATCTGAAGCTTTGGTCTCAAA 59.252 43.478 0.00 0.00 40.23 2.69
4729 4864 3.244215 ACGATCTGAAGCTTTGGTCTCAA 60.244 43.478 0.00 0.00 0.00 3.02
4730 4865 2.300152 ACGATCTGAAGCTTTGGTCTCA 59.700 45.455 0.00 0.00 0.00 3.27
4731 4866 2.926838 GACGATCTGAAGCTTTGGTCTC 59.073 50.000 0.00 0.02 0.00 3.36
4732 4867 2.354203 GGACGATCTGAAGCTTTGGTCT 60.354 50.000 0.00 0.00 0.00 3.85
4733 4868 2.003301 GGACGATCTGAAGCTTTGGTC 58.997 52.381 0.00 1.20 0.00 4.02
4734 4869 1.673033 CGGACGATCTGAAGCTTTGGT 60.673 52.381 0.00 0.00 0.00 3.67
4735 4870 1.002366 CGGACGATCTGAAGCTTTGG 58.998 55.000 0.00 0.00 0.00 3.28
4736 4871 0.371645 GCGGACGATCTGAAGCTTTG 59.628 55.000 0.00 0.00 0.00 2.77
4737 4872 0.741221 GGCGGACGATCTGAAGCTTT 60.741 55.000 0.00 0.00 0.00 3.51
4738 4873 1.153549 GGCGGACGATCTGAAGCTT 60.154 57.895 0.00 0.00 0.00 3.74
4739 4874 2.496817 GGCGGACGATCTGAAGCT 59.503 61.111 0.00 0.00 0.00 3.74
4750 4885 4.281947 GCTAGGGTAGCGGCGGAC 62.282 72.222 9.78 0.00 42.62 4.79
4758 4893 4.202398 ACATCCATCACATTGCTAGGGTAG 60.202 45.833 0.00 0.00 0.00 3.18
4759 4894 3.716353 ACATCCATCACATTGCTAGGGTA 59.284 43.478 0.00 0.00 0.00 3.69
4760 4895 2.511218 ACATCCATCACATTGCTAGGGT 59.489 45.455 0.00 0.00 0.00 4.34
4761 4896 2.882761 CACATCCATCACATTGCTAGGG 59.117 50.000 0.00 0.00 0.00 3.53
4762 4897 3.812262 TCACATCCATCACATTGCTAGG 58.188 45.455 0.00 0.00 0.00 3.02
4763 4898 4.275196 CCTTCACATCCATCACATTGCTAG 59.725 45.833 0.00 0.00 0.00 3.42
4764 4899 4.201657 CCTTCACATCCATCACATTGCTA 58.798 43.478 0.00 0.00 0.00 3.49
4765 4900 3.021695 CCTTCACATCCATCACATTGCT 58.978 45.455 0.00 0.00 0.00 3.91
4766 4901 2.100252 CCCTTCACATCCATCACATTGC 59.900 50.000 0.00 0.00 0.00 3.56
4767 4902 3.359033 ACCCTTCACATCCATCACATTG 58.641 45.455 0.00 0.00 0.00 2.82
4768 4903 3.744940 ACCCTTCACATCCATCACATT 57.255 42.857 0.00 0.00 0.00 2.71
4769 4904 3.744940 AACCCTTCACATCCATCACAT 57.255 42.857 0.00 0.00 0.00 3.21
4770 4905 3.420893 GAAACCCTTCACATCCATCACA 58.579 45.455 0.00 0.00 0.00 3.58
4771 4906 2.420022 CGAAACCCTTCACATCCATCAC 59.580 50.000 0.00 0.00 0.00 3.06
4772 4907 2.039746 ACGAAACCCTTCACATCCATCA 59.960 45.455 0.00 0.00 0.00 3.07
4773 4908 2.420022 CACGAAACCCTTCACATCCATC 59.580 50.000 0.00 0.00 0.00 3.51
4774 4909 2.224769 ACACGAAACCCTTCACATCCAT 60.225 45.455 0.00 0.00 0.00 3.41
4775 4910 1.142060 ACACGAAACCCTTCACATCCA 59.858 47.619 0.00 0.00 0.00 3.41
4776 4911 1.804748 GACACGAAACCCTTCACATCC 59.195 52.381 0.00 0.00 0.00 3.51
4777 4912 1.459592 CGACACGAAACCCTTCACATC 59.540 52.381 0.00 0.00 0.00 3.06
4778 4913 1.069513 TCGACACGAAACCCTTCACAT 59.930 47.619 0.00 0.00 31.06 3.21
4779 4914 0.460722 TCGACACGAAACCCTTCACA 59.539 50.000 0.00 0.00 31.06 3.58
4780 4915 1.574134 TTCGACACGAAACCCTTCAC 58.426 50.000 4.13 0.00 43.00 3.18
4789 4924 1.860676 CCAAGGTCTTTCGACACGAA 58.139 50.000 2.48 2.48 44.28 3.85
4790 4925 0.599204 GCCAAGGTCTTTCGACACGA 60.599 55.000 0.00 0.00 42.05 4.35
4791 4926 1.860078 GCCAAGGTCTTTCGACACG 59.140 57.895 0.00 0.00 42.05 4.49
4792 4927 0.878961 ACGCCAAGGTCTTTCGACAC 60.879 55.000 8.44 0.00 42.05 3.67
4793 4928 0.179067 AACGCCAAGGTCTTTCGACA 60.179 50.000 8.44 0.00 42.05 4.35
4794 4929 0.511653 GAACGCCAAGGTCTTTCGAC 59.488 55.000 8.44 0.00 39.49 4.20
4795 4930 0.601841 GGAACGCCAAGGTCTTTCGA 60.602 55.000 8.44 0.00 36.61 3.71
4796 4931 1.866925 GGAACGCCAAGGTCTTTCG 59.133 57.895 0.00 0.00 36.61 3.46
4810 4945 4.699522 ACCTGGAAGCGCCGGAAC 62.700 66.667 5.05 0.00 46.81 3.62
4811 4946 4.697756 CACCTGGAAGCGCCGGAA 62.698 66.667 5.05 0.00 46.81 4.30
4814 4949 3.423154 GAACACCTGGAAGCGCCG 61.423 66.667 2.29 0.00 40.66 6.46
4815 4950 3.056328 GGAACACCTGGAAGCGCC 61.056 66.667 2.29 0.00 37.10 6.53
4816 4951 2.281484 TGGAACACCTGGAAGCGC 60.281 61.111 0.00 0.00 0.00 5.92
4817 4952 0.250295 TTCTGGAACACCTGGAAGCG 60.250 55.000 0.00 0.00 0.00 4.68
4818 4953 1.072331 TCTTCTGGAACACCTGGAAGC 59.928 52.381 0.00 0.00 35.96 3.86
4819 4954 3.710209 ATCTTCTGGAACACCTGGAAG 57.290 47.619 0.00 0.00 36.56 3.46
4820 4955 3.754965 CAATCTTCTGGAACACCTGGAA 58.245 45.455 0.00 0.00 0.00 3.53
4821 4956 2.553028 GCAATCTTCTGGAACACCTGGA 60.553 50.000 0.00 0.00 0.00 3.86
4822 4957 1.815003 GCAATCTTCTGGAACACCTGG 59.185 52.381 0.00 0.00 0.00 4.45
4823 4958 1.466167 CGCAATCTTCTGGAACACCTG 59.534 52.381 0.00 0.00 0.00 4.00
4824 4959 1.347707 TCGCAATCTTCTGGAACACCT 59.652 47.619 0.00 0.00 0.00 4.00
4825 4960 1.808411 TCGCAATCTTCTGGAACACC 58.192 50.000 0.00 0.00 0.00 4.16
4826 4961 3.002791 TCATCGCAATCTTCTGGAACAC 58.997 45.455 0.00 0.00 0.00 3.32
4827 4962 3.264947 CTCATCGCAATCTTCTGGAACA 58.735 45.455 0.00 0.00 0.00 3.18
4828 4963 2.611292 CCTCATCGCAATCTTCTGGAAC 59.389 50.000 0.00 0.00 0.00 3.62
4829 4964 2.501316 TCCTCATCGCAATCTTCTGGAA 59.499 45.455 0.00 0.00 0.00 3.53
4830 4965 2.110578 TCCTCATCGCAATCTTCTGGA 58.889 47.619 0.00 0.00 0.00 3.86
4831 4966 2.208431 GTCCTCATCGCAATCTTCTGG 58.792 52.381 0.00 0.00 0.00 3.86
4832 4967 1.857217 CGTCCTCATCGCAATCTTCTG 59.143 52.381 0.00 0.00 0.00 3.02
4833 4968 1.202463 CCGTCCTCATCGCAATCTTCT 60.202 52.381 0.00 0.00 0.00 2.85
4834 4969 1.212616 CCGTCCTCATCGCAATCTTC 58.787 55.000 0.00 0.00 0.00 2.87
4835 4970 0.537188 ACCGTCCTCATCGCAATCTT 59.463 50.000 0.00 0.00 0.00 2.40
4836 4971 0.179100 CACCGTCCTCATCGCAATCT 60.179 55.000 0.00 0.00 0.00 2.40
4837 4972 1.154205 CCACCGTCCTCATCGCAATC 61.154 60.000 0.00 0.00 0.00 2.67
4838 4973 1.153369 CCACCGTCCTCATCGCAAT 60.153 57.895 0.00 0.00 0.00 3.56
4839 4974 1.822114 TTCCACCGTCCTCATCGCAA 61.822 55.000 0.00 0.00 0.00 4.85
4840 4975 2.279810 TTCCACCGTCCTCATCGCA 61.280 57.895 0.00 0.00 0.00 5.10
4841 4976 1.810030 GTTCCACCGTCCTCATCGC 60.810 63.158 0.00 0.00 0.00 4.58
4842 4977 1.516386 CGTTCCACCGTCCTCATCG 60.516 63.158 0.00 0.00 0.00 3.84
4843 4978 0.245539 TTCGTTCCACCGTCCTCATC 59.754 55.000 0.00 0.00 0.00 2.92
4844 4979 0.037605 GTTCGTTCCACCGTCCTCAT 60.038 55.000 0.00 0.00 0.00 2.90
4845 4980 1.111116 AGTTCGTTCCACCGTCCTCA 61.111 55.000 0.00 0.00 0.00 3.86
4846 4981 0.033090 AAGTTCGTTCCACCGTCCTC 59.967 55.000 0.00 0.00 0.00 3.71
4847 4982 0.466963 AAAGTTCGTTCCACCGTCCT 59.533 50.000 0.00 0.00 0.00 3.85
4848 4983 0.584876 CAAAGTTCGTTCCACCGTCC 59.415 55.000 0.00 0.00 0.00 4.79
4849 4984 1.259770 GACAAAGTTCGTTCCACCGTC 59.740 52.381 0.00 0.00 0.00 4.79
4850 4985 1.292992 GACAAAGTTCGTTCCACCGT 58.707 50.000 0.00 0.00 0.00 4.83
4851 4986 0.584876 GGACAAAGTTCGTTCCACCG 59.415 55.000 0.00 0.00 0.00 4.94
4852 4987 0.949397 GGGACAAAGTTCGTTCCACC 59.051 55.000 0.00 0.00 31.63 4.61
4853 4988 1.670791 TGGGACAAAGTTCGTTCCAC 58.329 50.000 0.00 0.00 37.09 4.02
4854 4989 1.670791 GTGGGACAAAGTTCGTTCCA 58.329 50.000 0.00 0.00 44.16 3.53
4855 4990 0.584876 CGTGGGACAAAGTTCGTTCC 59.415 55.000 0.00 0.00 44.16 3.62
4856 4991 0.584876 CCGTGGGACAAAGTTCGTTC 59.415 55.000 0.00 0.00 44.16 3.95
4857 4992 0.816421 CCCGTGGGACAAAGTTCGTT 60.816 55.000 0.00 0.00 44.16 3.85
4858 4993 1.227734 CCCGTGGGACAAAGTTCGT 60.228 57.895 0.00 0.00 44.16 3.85
4859 4994 3.650369 CCCGTGGGACAAAGTTCG 58.350 61.111 0.00 0.00 44.16 3.95
4877 5012 1.023513 GCGGATATCTGGCATCAGGC 61.024 60.000 13.48 0.00 41.23 4.85
4878 5013 0.738762 CGCGGATATCTGGCATCAGG 60.739 60.000 13.48 0.00 41.23 3.86
4879 5014 0.244721 TCGCGGATATCTGGCATCAG 59.755 55.000 13.48 0.82 42.21 2.90
4880 5015 0.897621 ATCGCGGATATCTGGCATCA 59.102 50.000 13.48 0.60 0.00 3.07
4881 5016 1.284657 CATCGCGGATATCTGGCATC 58.715 55.000 13.48 0.00 0.00 3.91
4882 5017 0.610174 ACATCGCGGATATCTGGCAT 59.390 50.000 13.48 6.18 0.00 4.40
4883 5018 0.392706 AACATCGCGGATATCTGGCA 59.607 50.000 13.48 4.39 0.00 4.92
4884 5019 0.792640 CAACATCGCGGATATCTGGC 59.207 55.000 13.48 10.78 0.00 4.85
4885 5020 0.792640 GCAACATCGCGGATATCTGG 59.207 55.000 13.48 3.97 0.00 3.86
4904 5039 3.154584 TTTATAGGGGGTCGCCGCG 62.155 63.158 6.39 6.39 37.34 6.46
4905 5040 1.301479 CTTTATAGGGGGTCGCCGC 60.301 63.158 0.00 4.69 35.60 6.53
4906 5041 1.370064 CCTTTATAGGGGGTCGCCG 59.630 63.158 0.00 0.00 37.94 6.46
4915 5050 2.224066 CGAGCTCCACACCCTTTATAGG 60.224 54.545 8.47 0.00 41.60 2.57
4916 5051 2.431057 ACGAGCTCCACACCCTTTATAG 59.569 50.000 8.47 0.00 0.00 1.31
4917 5052 2.429610 GACGAGCTCCACACCCTTTATA 59.570 50.000 8.47 0.00 0.00 0.98
4918 5053 1.207329 GACGAGCTCCACACCCTTTAT 59.793 52.381 8.47 0.00 0.00 1.40
4919 5054 0.606604 GACGAGCTCCACACCCTTTA 59.393 55.000 8.47 0.00 0.00 1.85
4920 5055 1.371558 GACGAGCTCCACACCCTTT 59.628 57.895 8.47 0.00 0.00 3.11
4921 5056 2.584391 GGACGAGCTCCACACCCTT 61.584 63.158 8.47 0.00 39.21 3.95
4922 5057 2.997897 GGACGAGCTCCACACCCT 60.998 66.667 8.47 0.00 39.21 4.34
4923 5058 4.083862 GGGACGAGCTCCACACCC 62.084 72.222 8.47 11.74 41.63 4.61
4924 5059 3.302347 CTGGGACGAGCTCCACACC 62.302 68.421 8.47 6.30 41.63 4.16
4925 5060 2.219325 CTCTGGGACGAGCTCCACAC 62.219 65.000 8.47 4.04 41.63 3.82
4926 5061 1.979155 CTCTGGGACGAGCTCCACA 60.979 63.158 8.47 0.93 41.63 4.17
4927 5062 2.888863 CTCTGGGACGAGCTCCAC 59.111 66.667 8.47 2.00 41.63 4.02
4928 5063 3.071206 GCTCTGGGACGAGCTCCA 61.071 66.667 8.47 0.00 45.95 3.86
4929 5064 4.200283 CGCTCTGGGACGAGCTCC 62.200 72.222 8.47 0.00 46.74 4.70
4930 5065 4.200283 CCGCTCTGGGACGAGCTC 62.200 72.222 2.73 2.73 46.74 4.09
4936 5071 4.821589 CTTCGGCCGCTCTGGGAC 62.822 72.222 23.51 0.00 38.63 4.46
4938 5073 4.521062 CTCTTCGGCCGCTCTGGG 62.521 72.222 23.51 6.10 38.63 4.45
4939 5074 2.343163 CTACTCTTCGGCCGCTCTGG 62.343 65.000 23.51 11.67 42.50 3.86
4940 5075 1.064946 CTACTCTTCGGCCGCTCTG 59.935 63.158 23.51 13.24 0.00 3.35
4941 5076 1.077644 TCTACTCTTCGGCCGCTCT 60.078 57.895 23.51 2.85 0.00 4.09
4942 5077 1.357334 CTCTACTCTTCGGCCGCTC 59.643 63.158 23.51 0.00 0.00 5.03
4943 5078 2.776913 GCTCTACTCTTCGGCCGCT 61.777 63.158 23.51 2.06 0.00 5.52
4944 5079 2.278923 GCTCTACTCTTCGGCCGC 60.279 66.667 23.51 0.00 0.00 6.53
4945 5080 1.064946 CTGCTCTACTCTTCGGCCG 59.935 63.158 22.12 22.12 0.00 6.13
4946 5081 1.227118 GCTGCTCTACTCTTCGGCC 60.227 63.158 0.00 0.00 0.00 6.13
4947 5082 1.587613 CGCTGCTCTACTCTTCGGC 60.588 63.158 0.00 0.00 0.00 5.54
4948 5083 1.064946 CCGCTGCTCTACTCTTCGG 59.935 63.158 0.00 0.00 0.00 4.30
4949 5084 0.028770 CTCCGCTGCTCTACTCTTCG 59.971 60.000 0.00 0.00 0.00 3.79
4950 5085 1.384525 TCTCCGCTGCTCTACTCTTC 58.615 55.000 0.00 0.00 0.00 2.87
4951 5086 1.748493 CTTCTCCGCTGCTCTACTCTT 59.252 52.381 0.00 0.00 0.00 2.85
4952 5087 1.065053 TCTTCTCCGCTGCTCTACTCT 60.065 52.381 0.00 0.00 0.00 3.24
4953 5088 1.384525 TCTTCTCCGCTGCTCTACTC 58.615 55.000 0.00 0.00 0.00 2.59
4954 5089 1.748493 CTTCTTCTCCGCTGCTCTACT 59.252 52.381 0.00 0.00 0.00 2.57
4955 5090 1.202359 CCTTCTTCTCCGCTGCTCTAC 60.202 57.143 0.00 0.00 0.00 2.59
4956 5091 1.107114 CCTTCTTCTCCGCTGCTCTA 58.893 55.000 0.00 0.00 0.00 2.43
4957 5092 0.902516 ACCTTCTTCTCCGCTGCTCT 60.903 55.000 0.00 0.00 0.00 4.09
4958 5093 0.739112 CACCTTCTTCTCCGCTGCTC 60.739 60.000 0.00 0.00 0.00 4.26
4959 5094 1.188219 TCACCTTCTTCTCCGCTGCT 61.188 55.000 0.00 0.00 0.00 4.24
4960 5095 0.739112 CTCACCTTCTTCTCCGCTGC 60.739 60.000 0.00 0.00 0.00 5.25
4961 5096 0.605589 ACTCACCTTCTTCTCCGCTG 59.394 55.000 0.00 0.00 0.00 5.18
4962 5097 0.605589 CACTCACCTTCTTCTCCGCT 59.394 55.000 0.00 0.00 0.00 5.52
4963 5098 0.603569 TCACTCACCTTCTTCTCCGC 59.396 55.000 0.00 0.00 0.00 5.54
4964 5099 4.261825 GGATATCACTCACCTTCTTCTCCG 60.262 50.000 4.83 0.00 0.00 4.63
4965 5100 4.898861 AGGATATCACTCACCTTCTTCTCC 59.101 45.833 4.83 0.00 0.00 3.71
4966 5101 5.278266 CGAGGATATCACTCACCTTCTTCTC 60.278 48.000 16.59 5.00 34.66 2.87
4967 5102 4.582656 CGAGGATATCACTCACCTTCTTCT 59.417 45.833 16.59 0.00 34.66 2.85
4968 5103 4.794655 GCGAGGATATCACTCACCTTCTTC 60.795 50.000 16.59 0.00 34.66 2.87
4969 5104 3.068873 GCGAGGATATCACTCACCTTCTT 59.931 47.826 16.59 0.00 34.66 2.52
4970 5105 2.625790 GCGAGGATATCACTCACCTTCT 59.374 50.000 16.59 0.00 34.66 2.85
4971 5106 2.362397 TGCGAGGATATCACTCACCTTC 59.638 50.000 16.59 5.47 34.66 3.46
4972 5107 2.363680 CTGCGAGGATATCACTCACCTT 59.636 50.000 16.59 0.00 34.66 3.50
4973 5108 1.959985 CTGCGAGGATATCACTCACCT 59.040 52.381 16.59 0.00 34.66 4.00
4974 5109 1.000283 CCTGCGAGGATATCACTCACC 60.000 57.143 16.59 9.95 37.67 4.02
4975 5110 1.683917 ACCTGCGAGGATATCACTCAC 59.316 52.381 16.59 10.34 37.67 3.51
4976 5111 1.683385 CACCTGCGAGGATATCACTCA 59.317 52.381 16.59 6.77 37.67 3.41
4977 5112 1.604185 GCACCTGCGAGGATATCACTC 60.604 57.143 4.83 7.91 37.67 3.51
4978 5113 0.390860 GCACCTGCGAGGATATCACT 59.609 55.000 4.83 0.00 37.67 3.41
4979 5114 0.601311 GGCACCTGCGAGGATATCAC 60.601 60.000 4.83 0.00 43.26 3.06
4980 5115 1.748403 GGCACCTGCGAGGATATCA 59.252 57.895 4.83 0.00 43.26 2.15
4981 5116 1.373497 CGGCACCTGCGAGGATATC 60.373 63.158 8.91 0.00 43.26 1.63
4982 5117 2.737180 CGGCACCTGCGAGGATAT 59.263 61.111 8.91 0.00 43.26 1.63
4983 5118 4.221422 GCGGCACCTGCGAGGATA 62.221 66.667 8.91 0.00 43.26 2.59
4999 5134 3.512516 GATGCCTGCCCGTTCTGC 61.513 66.667 0.00 0.00 0.00 4.26
5000 5135 2.046023 TGATGCCTGCCCGTTCTG 60.046 61.111 0.00 0.00 0.00 3.02
5001 5136 2.249413 CTCTGATGCCTGCCCGTTCT 62.249 60.000 0.00 0.00 0.00 3.01
5002 5137 1.817099 CTCTGATGCCTGCCCGTTC 60.817 63.158 0.00 0.00 0.00 3.95
5003 5138 2.270205 CTCTGATGCCTGCCCGTT 59.730 61.111 0.00 0.00 0.00 4.44
5004 5139 3.790437 CCTCTGATGCCTGCCCGT 61.790 66.667 0.00 0.00 0.00 5.28
5005 5140 2.937379 CTTCCTCTGATGCCTGCCCG 62.937 65.000 0.00 0.00 0.00 6.13
5006 5141 1.153005 CTTCCTCTGATGCCTGCCC 60.153 63.158 0.00 0.00 0.00 5.36
5007 5142 1.823041 GCTTCCTCTGATGCCTGCC 60.823 63.158 0.00 0.00 36.05 4.85
5008 5143 2.178890 CGCTTCCTCTGATGCCTGC 61.179 63.158 0.00 0.00 38.17 4.85
5009 5144 0.106335 ATCGCTTCCTCTGATGCCTG 59.894 55.000 0.00 0.00 38.17 4.85
5010 5145 0.835941 AATCGCTTCCTCTGATGCCT 59.164 50.000 0.00 0.00 38.17 4.75
5011 5146 0.942962 CAATCGCTTCCTCTGATGCC 59.057 55.000 0.00 0.00 38.17 4.40
5012 5147 1.865970 CTCAATCGCTTCCTCTGATGC 59.134 52.381 0.00 0.00 38.07 3.91
5013 5148 1.865970 GCTCAATCGCTTCCTCTGATG 59.134 52.381 0.00 0.00 0.00 3.07
5014 5149 1.537776 CGCTCAATCGCTTCCTCTGAT 60.538 52.381 0.00 0.00 0.00 2.90
5015 5150 0.179127 CGCTCAATCGCTTCCTCTGA 60.179 55.000 0.00 0.00 0.00 3.27
5016 5151 0.179127 TCGCTCAATCGCTTCCTCTG 60.179 55.000 0.00 0.00 0.00 3.35
5017 5152 0.179124 GTCGCTCAATCGCTTCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
5018 5153 1.475441 CGTCGCTCAATCGCTTCCTC 61.475 60.000 0.00 0.00 0.00 3.71
5019 5154 1.517257 CGTCGCTCAATCGCTTCCT 60.517 57.895 0.00 0.00 0.00 3.36
5020 5155 2.998667 CGTCGCTCAATCGCTTCC 59.001 61.111 0.00 0.00 0.00 3.46
5021 5156 2.318024 GCGTCGCTCAATCGCTTC 59.682 61.111 10.68 0.00 45.29 3.86
5025 5160 0.800683 TAGGTTGCGTCGCTCAATCG 60.801 55.000 19.50 0.00 30.27 3.34
5026 5161 0.645868 GTAGGTTGCGTCGCTCAATC 59.354 55.000 19.50 5.58 0.00 2.67
5027 5162 1.076533 CGTAGGTTGCGTCGCTCAAT 61.077 55.000 19.50 4.87 0.00 2.57
5028 5163 1.731613 CGTAGGTTGCGTCGCTCAA 60.732 57.895 19.50 1.87 0.00 3.02
5029 5164 2.126618 CGTAGGTTGCGTCGCTCA 60.127 61.111 19.50 1.80 0.00 4.26
5030 5165 3.542742 GCGTAGGTTGCGTCGCTC 61.543 66.667 19.50 11.24 44.28 5.03
5033 5168 1.076533 AATGAGCGTAGGTTGCGTCG 61.077 55.000 0.00 0.00 39.88 5.12
5034 5169 2.750815 AATGAGCGTAGGTTGCGTC 58.249 52.632 0.00 0.00 39.88 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.