Multiple sequence alignment - TraesCS3A01G355800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G355800 chr3A 100.000 6109 0 0 1 6109 603800247 603794139 0.000000e+00 11282.0
1 TraesCS3A01G355800 chr3A 95.652 115 4 1 444 557 15776290 15776404 3.760000e-42 183.0
2 TraesCS3A01G355800 chr3A 96.970 33 1 0 5275 5307 696373461 696373429 8.550000e-04 56.5
3 TraesCS3A01G355800 chr3A 96.774 31 1 0 5217 5247 282311693 282311663 1.100000e-02 52.8
4 TraesCS3A01G355800 chr3B 95.052 3052 118 10 1713 4756 611695524 611692498 0.000000e+00 4769.0
5 TraesCS3A01G355800 chr3B 89.149 1152 75 23 555 1682 611696651 611695526 0.000000e+00 1389.0
6 TraesCS3A01G355800 chr3B 86.128 656 40 15 5431 6071 611680693 611680074 0.000000e+00 660.0
7 TraesCS3A01G355800 chr3B 90.730 356 29 2 4769 5124 611692353 611692002 7.170000e-129 472.0
8 TraesCS3A01G355800 chr3B 91.667 72 2 1 5236 5303 779032016 779032087 5.040000e-16 97.1
9 TraesCS3A01G355800 chr3B 89.041 73 2 3 5236 5303 779032087 779032016 1.090000e-12 86.1
10 TraesCS3A01G355800 chr3B 89.130 46 5 0 5217 5262 177427104 177427059 2.380000e-04 58.4
11 TraesCS3A01G355800 chr3D 96.643 2502 71 10 2005 4501 461207321 461204828 0.000000e+00 4143.0
12 TraesCS3A01G355800 chr3D 87.322 1475 102 41 550 1973 461208758 461207318 0.000000e+00 1609.0
13 TraesCS3A01G355800 chr3D 93.817 744 21 7 4500 5218 461204721 461203978 0.000000e+00 1096.0
14 TraesCS3A01G355800 chr3D 89.796 686 40 10 5431 6109 461203979 461203317 0.000000e+00 852.0
15 TraesCS3A01G355800 chr3D 86.444 450 48 9 8 447 461209202 461208756 1.190000e-131 481.0
16 TraesCS3A01G355800 chr3D 96.429 112 4 0 443 554 463852291 463852402 1.050000e-42 185.0
17 TraesCS3A01G355800 chr6D 87.464 2808 252 47 1968 4701 461364413 461361632 0.000000e+00 3144.0
18 TraesCS3A01G355800 chr6D 77.650 868 94 53 679 1474 461366222 461365383 2.610000e-118 436.0
19 TraesCS3A01G355800 chr6D 90.076 131 12 1 5302 5432 54895773 54895644 1.050000e-37 169.0
20 TraesCS3A01G355800 chr6D 86.777 121 13 3 1024 1141 11769773 11769893 1.380000e-26 132.0
21 TraesCS3A01G355800 chr6B 86.634 2858 268 61 1968 4739 702834871 702832042 0.000000e+00 3057.0
22 TraesCS3A01G355800 chr6B 74.201 1345 264 55 3174 4450 21433761 21432432 9.210000e-133 484.0
23 TraesCS3A01G355800 chr6B 78.094 703 92 37 799 1474 702836514 702835847 7.430000e-104 388.0
24 TraesCS3A01G355800 chr6B 89.552 134 11 2 5302 5432 177272046 177272179 3.790000e-37 167.0
25 TraesCS3A01G355800 chr6B 76.190 252 37 8 1403 1633 702835739 702835490 1.800000e-20 111.0
26 TraesCS3A01G355800 chr6A 87.185 1748 147 33 3054 4739 607959941 607958209 0.000000e+00 1916.0
27 TraesCS3A01G355800 chr6A 85.419 1111 108 32 1968 3052 607961112 607960030 0.000000e+00 1105.0
28 TraesCS3A01G355800 chr6A 77.105 760 152 15 3708 4450 13065214 13065968 2.630000e-113 420.0
29 TraesCS3A01G355800 chr6A 78.606 617 65 32 679 1248 607962934 607962338 4.530000e-91 346.0
30 TraesCS3A01G355800 chr6A 77.524 307 39 10 1407 1686 607961863 607961560 2.280000e-34 158.0
31 TraesCS3A01G355800 chr6A 87.719 114 9 5 1031 1140 13063122 13063234 1.790000e-25 128.0
32 TraesCS3A01G355800 chr6A 79.605 152 21 6 799 945 607966173 607966027 3.900000e-17 100.0
33 TraesCS3A01G355800 chr6A 100.000 31 0 0 5275 5305 356209064 356209094 2.380000e-04 58.4
34 TraesCS3A01G355800 chr1A 98.198 111 2 0 446 556 436435036 436435146 1.740000e-45 195.0
35 TraesCS3A01G355800 chr7A 97.248 109 3 0 445 553 133053336 133053228 1.050000e-42 185.0
36 TraesCS3A01G355800 chr7A 92.857 126 8 1 429 553 381253905 381254030 1.350000e-41 182.0
37 TraesCS3A01G355800 chr2A 96.429 112 4 0 441 552 227627161 227627050 1.050000e-42 185.0
38 TraesCS3A01G355800 chr2A 95.614 114 5 0 442 555 116161076 116161189 3.760000e-42 183.0
39 TraesCS3A01G355800 chr2A 79.808 104 20 1 51 154 678903422 678903524 2.360000e-09 75.0
40 TraesCS3A01G355800 chr4A 96.396 111 4 0 443 553 628491119 628491009 3.760000e-42 183.0
41 TraesCS3A01G355800 chr4A 87.591 137 16 1 5302 5438 36356431 36356566 2.280000e-34 158.0
42 TraesCS3A01G355800 chr4A 86.957 138 15 2 5302 5439 544034718 544034852 1.060000e-32 152.0
43 TraesCS3A01G355800 chr4A 86.331 139 15 4 5302 5439 61742580 61742445 1.370000e-31 148.0
44 TraesCS3A01G355800 chr7D 88.667 150 14 2 5284 5433 54373434 54373580 4.860000e-41 180.0
45 TraesCS3A01G355800 chr7D 87.407 135 14 2 5302 5433 83654404 83654270 1.060000e-32 152.0
46 TraesCS3A01G355800 chr7D 100.000 31 0 0 5275 5305 180444983 180445013 2.380000e-04 58.4
47 TraesCS3A01G355800 chr5B 95.536 112 5 0 443 554 679807036 679806925 4.860000e-41 180.0
48 TraesCS3A01G355800 chr5B 100.000 31 0 0 5275 5305 704532000 704532030 2.380000e-04 58.4
49 TraesCS3A01G355800 chr4D 89.630 135 10 3 5302 5432 63251463 63251329 1.050000e-37 169.0
50 TraesCS3A01G355800 chr1D 88.722 133 13 2 5302 5432 81372437 81372569 1.760000e-35 161.0
51 TraesCS3A01G355800 chr1D 97.222 36 1 0 3014 3049 471283754 471283789 1.840000e-05 62.1
52 TraesCS3A01G355800 chr4B 88.000 75 3 1 5236 5304 401110995 401111069 3.920000e-12 84.2
53 TraesCS3A01G355800 chr4B 89.362 47 3 2 5217 5262 285840088 285840133 2.380000e-04 58.4
54 TraesCS3A01G355800 chr4B 100.000 28 0 0 5217 5244 32904887 32904914 1.100000e-02 52.8
55 TraesCS3A01G355800 chr5D 100.000 28 0 0 5217 5244 313155571 313155598 1.100000e-02 52.8
56 TraesCS3A01G355800 chr1B 94.286 35 0 1 5278 5312 346527304 346527272 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G355800 chr3A 603794139 603800247 6108 True 11282.000000 11282 100.000000 1 6109 1 chr3A.!!$R2 6108
1 TraesCS3A01G355800 chr3B 611692002 611696651 4649 True 2210.000000 4769 91.643667 555 5124 3 chr3B.!!$R4 4569
2 TraesCS3A01G355800 chr3B 611680074 611680693 619 True 660.000000 660 86.128000 5431 6071 1 chr3B.!!$R2 640
3 TraesCS3A01G355800 chr3D 461203317 461209202 5885 True 1636.200000 4143 90.804400 8 6109 5 chr3D.!!$R1 6101
4 TraesCS3A01G355800 chr6D 461361632 461366222 4590 True 1790.000000 3144 82.557000 679 4701 2 chr6D.!!$R2 4022
5 TraesCS3A01G355800 chr6B 702832042 702836514 4472 True 1185.333333 3057 80.306000 799 4739 3 chr6B.!!$R2 3940
6 TraesCS3A01G355800 chr6B 21432432 21433761 1329 True 484.000000 484 74.201000 3174 4450 1 chr6B.!!$R1 1276
7 TraesCS3A01G355800 chr6A 607958209 607966173 7964 True 725.000000 1916 81.667800 679 4739 5 chr6A.!!$R1 4060
8 TraesCS3A01G355800 chr6A 13063122 13065968 2846 False 274.000000 420 82.412000 1031 4450 2 chr6A.!!$F2 3419

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
455 465 0.038526 ACACGCTTGTACTTCCTCCG 60.039 55.000 0.00 0.00 32.60 4.63 F
1529 4601 0.180406 GCTCGAGCCAAATTCCCCTA 59.820 55.000 27.22 0.00 34.31 3.53 F
2138 5815 0.320374 AGCTGCAAAGTACTACGCCA 59.680 50.000 12.51 0.86 0.00 5.69 F
2155 5832 1.001181 GCCATCCATGTGCACAACTTT 59.999 47.619 25.72 3.79 0.00 2.66 F
3482 7347 2.378547 TGGCAATAGAAGGGTTCAAGGT 59.621 45.455 0.00 0.00 0.00 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 4804 0.174845 CTGGCGGACGTATCCTTGAA 59.825 55.000 0.0 0.0 43.73 2.69 R
2953 6690 0.925558 TAGCCCATCCAGAAATGGCA 59.074 50.000 0.0 0.0 44.17 4.92 R
3482 7347 1.469703 CAATGACCATCTCGCTTTGCA 59.530 47.619 0.0 0.0 0.00 4.08 R
3869 7786 1.645710 AGGTATTCCTGGATAGCCCG 58.354 55.000 0.0 0.0 43.33 6.13 R
5417 9634 0.033306 ACTCCTACTCCCTCCGTTCC 60.033 60.000 0.0 0.0 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.343380 TCATCACGCACGTTCGTATAT 57.657 42.857 13.89 7.40 41.21 0.86
27 28 2.466571 CGCACGTTCGTATATTGAGGTC 59.533 50.000 0.00 0.00 0.00 3.85
28 29 3.441163 GCACGTTCGTATATTGAGGTCA 58.559 45.455 0.00 0.00 0.00 4.02
38 39 6.493802 TCGTATATTGAGGTCAGCTATTTCCT 59.506 38.462 0.00 0.00 0.00 3.36
77 78 3.104519 AGGTGATCCATTTTCCATGCA 57.895 42.857 0.00 0.00 35.89 3.96
114 115 7.823799 TGAGATGACATACTTGCATGTTAAGAA 59.176 33.333 10.85 0.00 39.25 2.52
209 210 3.726291 TTTTGGCTCAGTTTTAGGTGC 57.274 42.857 0.00 0.00 0.00 5.01
211 212 2.185004 TGGCTCAGTTTTAGGTGCTC 57.815 50.000 0.00 0.00 0.00 4.26
212 213 1.699634 TGGCTCAGTTTTAGGTGCTCT 59.300 47.619 0.00 0.00 0.00 4.09
216 217 4.944317 GGCTCAGTTTTAGGTGCTCTAATT 59.056 41.667 1.96 0.00 37.74 1.40
217 218 5.416013 GGCTCAGTTTTAGGTGCTCTAATTT 59.584 40.000 1.96 0.00 37.74 1.82
219 220 6.803807 GCTCAGTTTTAGGTGCTCTAATTTTG 59.196 38.462 1.96 2.24 37.74 2.44
262 268 5.219633 ACGAATTTCAACCAAATCCGAAAG 58.780 37.500 0.00 0.00 34.27 2.62
265 271 6.033831 CGAATTTCAACCAAATCCGAAAGATG 59.966 38.462 0.00 0.00 34.27 2.90
335 341 9.399797 TCATGATAAAGTACATTTTGATGAGCT 57.600 29.630 0.00 0.00 32.01 4.09
387 394 3.439932 GTGTAGCTCACATGTTGAACG 57.560 47.619 0.00 0.00 45.51 3.95
444 454 7.565450 TTCATCATAAAAATTCACACGCTTG 57.435 32.000 0.00 0.00 0.00 4.01
446 456 7.811653 TCATCATAAAAATTCACACGCTTGTA 58.188 30.769 0.00 0.00 33.30 2.41
447 457 7.748683 TCATCATAAAAATTCACACGCTTGTAC 59.251 33.333 0.00 0.00 33.30 2.90
449 459 7.644490 TCATAAAAATTCACACGCTTGTACTT 58.356 30.769 0.00 0.00 33.30 2.24
450 460 7.801315 TCATAAAAATTCACACGCTTGTACTTC 59.199 33.333 0.00 0.00 33.30 3.01
451 461 4.483476 AAATTCACACGCTTGTACTTCC 57.517 40.909 0.00 0.00 33.30 3.46
452 462 2.902705 TTCACACGCTTGTACTTCCT 57.097 45.000 0.00 0.00 33.30 3.36
453 463 2.433868 TCACACGCTTGTACTTCCTC 57.566 50.000 0.00 0.00 33.30 3.71
454 464 1.000506 TCACACGCTTGTACTTCCTCC 59.999 52.381 0.00 0.00 33.30 4.30
455 465 0.038526 ACACGCTTGTACTTCCTCCG 60.039 55.000 0.00 0.00 32.60 4.63
457 467 0.677842 ACGCTTGTACTTCCTCCGTT 59.322 50.000 0.00 0.00 0.00 4.44
458 468 1.336609 ACGCTTGTACTTCCTCCGTTC 60.337 52.381 0.00 0.00 0.00 3.95
459 469 1.723220 GCTTGTACTTCCTCCGTTCC 58.277 55.000 0.00 0.00 0.00 3.62
460 470 1.001633 GCTTGTACTTCCTCCGTTCCA 59.998 52.381 0.00 0.00 0.00 3.53
462 472 3.735591 CTTGTACTTCCTCCGTTCCAAA 58.264 45.455 0.00 0.00 0.00 3.28
463 473 4.324267 CTTGTACTTCCTCCGTTCCAAAT 58.676 43.478 0.00 0.00 0.00 2.32
464 474 4.360951 TGTACTTCCTCCGTTCCAAATT 57.639 40.909 0.00 0.00 0.00 1.82
465 475 5.486735 TGTACTTCCTCCGTTCCAAATTA 57.513 39.130 0.00 0.00 0.00 1.40
466 476 5.240121 TGTACTTCCTCCGTTCCAAATTAC 58.760 41.667 0.00 0.00 0.00 1.89
468 478 4.576879 ACTTCCTCCGTTCCAAATTACTC 58.423 43.478 0.00 0.00 0.00 2.59
471 481 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
472 482 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
475 485 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
477 487 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
479 489 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
480 490 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
481 491 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
482 492 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
483 493 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
484 494 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
485 495 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
486 496 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
487 497 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
488 498 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
490 500 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
491 501 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
492 502 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
494 504 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
495 505 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
496 506 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
497 507 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
523 533 7.825331 ATACATCTAGATACATCCATACCCG 57.175 40.000 4.54 0.00 0.00 5.28
524 534 4.402793 ACATCTAGATACATCCATACCCGC 59.597 45.833 4.54 0.00 0.00 6.13
525 535 3.014623 TCTAGATACATCCATACCCGCG 58.985 50.000 0.00 0.00 0.00 6.46
526 536 1.919240 AGATACATCCATACCCGCGA 58.081 50.000 8.23 0.00 0.00 5.87
527 537 1.544691 AGATACATCCATACCCGCGAC 59.455 52.381 8.23 0.00 0.00 5.19
528 538 1.271379 GATACATCCATACCCGCGACA 59.729 52.381 8.23 0.00 0.00 4.35
532 542 1.067974 CATCCATACCCGCGACAAGTA 59.932 52.381 8.23 4.04 0.00 2.24
533 543 1.184431 TCCATACCCGCGACAAGTAA 58.816 50.000 8.23 0.00 0.00 2.24
534 544 1.758280 TCCATACCCGCGACAAGTAAT 59.242 47.619 8.23 0.00 0.00 1.89
535 545 2.168936 TCCATACCCGCGACAAGTAATT 59.831 45.455 8.23 0.00 0.00 1.40
536 546 2.542595 CCATACCCGCGACAAGTAATTC 59.457 50.000 8.23 0.00 0.00 2.17
537 547 3.191669 CATACCCGCGACAAGTAATTCA 58.808 45.455 8.23 0.00 0.00 2.57
538 548 2.172851 ACCCGCGACAAGTAATTCAA 57.827 45.000 8.23 0.00 0.00 2.69
540 550 2.879646 ACCCGCGACAAGTAATTCAAAA 59.120 40.909 8.23 0.00 0.00 2.44
541 551 3.231160 CCCGCGACAAGTAATTCAAAAC 58.769 45.455 8.23 0.00 0.00 2.43
542 552 2.900046 CCGCGACAAGTAATTCAAAACG 59.100 45.455 8.23 0.00 0.00 3.60
544 554 3.363182 CGCGACAAGTAATTCAAAACGGA 60.363 43.478 0.00 0.00 0.00 4.69
545 555 4.148891 GCGACAAGTAATTCAAAACGGAG 58.851 43.478 0.00 0.00 0.00 4.63
546 556 4.708601 CGACAAGTAATTCAAAACGGAGG 58.291 43.478 0.00 0.00 0.00 4.30
547 557 4.378046 CGACAAGTAATTCAAAACGGAGGG 60.378 45.833 0.00 0.00 0.00 4.30
548 558 4.721132 ACAAGTAATTCAAAACGGAGGGA 58.279 39.130 0.00 0.00 0.00 4.20
635 647 4.686191 TGCATTTTGTCAAAATCCAGGT 57.314 36.364 18.62 0.00 38.97 4.00
693 3253 7.095695 TGAAAAGGTAAAAGAAAGGAGTGTG 57.904 36.000 0.00 0.00 0.00 3.82
733 3293 1.834896 GGGAGGAGGAGAGGAGAAAAC 59.165 57.143 0.00 0.00 0.00 2.43
736 3296 2.499693 GAGGAGGAGAGGAGAAAACCAG 59.500 54.545 0.00 0.00 0.00 4.00
737 3297 1.065782 GGAGGAGAGGAGAAAACCAGC 60.066 57.143 0.00 0.00 0.00 4.85
739 3299 0.608640 GGAGAGGAGAAAACCAGCGA 59.391 55.000 0.00 0.00 0.00 4.93
740 3300 1.404851 GGAGAGGAGAAAACCAGCGAG 60.405 57.143 0.00 0.00 0.00 5.03
741 3301 1.546476 GAGAGGAGAAAACCAGCGAGA 59.454 52.381 0.00 0.00 0.00 4.04
982 3589 3.965539 CTCTGACCCGGCAGGCTTG 62.966 68.421 8.95 0.00 40.58 4.01
994 3611 1.377725 AGGCTTGTTGATCCAGGCG 60.378 57.895 0.00 0.00 38.24 5.52
1140 3760 2.978010 CGCCACGCCTTCAAGGTT 60.978 61.111 5.03 0.00 37.80 3.50
1156 3806 1.419720 GGTTATCCCCTCTGCCCCTC 61.420 65.000 0.00 0.00 0.00 4.30
1278 3965 5.934402 ATACCACGATTAAAGACTGAGGT 57.066 39.130 0.00 0.00 0.00 3.85
1283 3970 4.323868 CACGATTAAAGACTGAGGTCGAAC 59.676 45.833 0.00 0.00 46.29 3.95
1324 4213 4.602340 TTTAGATGCGGTAGATCCTTCC 57.398 45.455 0.00 0.00 0.00 3.46
1369 4428 4.112634 GTGTTCTTGGTGCTTTTTCTTCC 58.887 43.478 0.00 0.00 0.00 3.46
1371 4430 4.097892 TGTTCTTGGTGCTTTTTCTTCCTC 59.902 41.667 0.00 0.00 0.00 3.71
1374 4433 4.339247 TCTTGGTGCTTTTTCTTCCTCTTG 59.661 41.667 0.00 0.00 0.00 3.02
1375 4434 3.897239 TGGTGCTTTTTCTTCCTCTTGA 58.103 40.909 0.00 0.00 0.00 3.02
1376 4435 3.632145 TGGTGCTTTTTCTTCCTCTTGAC 59.368 43.478 0.00 0.00 0.00 3.18
1377 4436 3.885901 GGTGCTTTTTCTTCCTCTTGACT 59.114 43.478 0.00 0.00 0.00 3.41
1378 4437 4.261363 GGTGCTTTTTCTTCCTCTTGACTG 60.261 45.833 0.00 0.00 0.00 3.51
1379 4438 4.576463 GTGCTTTTTCTTCCTCTTGACTGA 59.424 41.667 0.00 0.00 0.00 3.41
1380 4439 5.066505 GTGCTTTTTCTTCCTCTTGACTGAA 59.933 40.000 0.00 0.00 0.00 3.02
1385 4444 5.745312 TTCTTCCTCTTGACTGAATGCTA 57.255 39.130 0.00 0.00 0.00 3.49
1394 4453 4.623932 TGACTGAATGCTAGTTCTTGGT 57.376 40.909 0.00 0.00 0.00 3.67
1395 4454 4.973168 TGACTGAATGCTAGTTCTTGGTT 58.027 39.130 0.00 0.00 0.00 3.67
1396 4455 4.997395 TGACTGAATGCTAGTTCTTGGTTC 59.003 41.667 0.00 0.00 0.00 3.62
1397 4456 4.973168 ACTGAATGCTAGTTCTTGGTTCA 58.027 39.130 0.00 0.00 0.00 3.18
1398 4457 4.999950 ACTGAATGCTAGTTCTTGGTTCAG 59.000 41.667 9.82 9.82 43.91 3.02
1399 4458 5.221722 ACTGAATGCTAGTTCTTGGTTCAGA 60.222 40.000 16.35 0.00 42.04 3.27
1400 4459 5.620206 TGAATGCTAGTTCTTGGTTCAGAA 58.380 37.500 0.00 0.00 0.00 3.02
1443 4502 1.750193 GCCTAGCATAGTGTTTGGCA 58.250 50.000 12.60 0.00 45.43 4.92
1451 4510 3.868369 GCATAGTGTTTGGCAGTAGGACA 60.868 47.826 0.00 0.00 37.05 4.02
1474 4533 3.524095 TTTGACATGGGAAGGTGACAT 57.476 42.857 0.00 0.00 0.00 3.06
1475 4534 4.649267 TTTGACATGGGAAGGTGACATA 57.351 40.909 0.00 0.00 0.00 2.29
1509 4576 3.925379 TGATGAGCATACTGTGTTCGTT 58.075 40.909 0.00 0.00 40.58 3.85
1522 4589 4.693532 TCGTTGCTCGAGCCAAAT 57.306 50.000 33.23 0.00 44.01 2.32
1529 4601 0.180406 GCTCGAGCCAAATTCCCCTA 59.820 55.000 27.22 0.00 34.31 3.53
1541 4613 3.953542 ATTCCCCTAGGTCAATTCACC 57.046 47.619 8.29 0.00 36.58 4.02
1632 4737 4.051922 GGATCTGATTCAGCGTATTTCGT 58.948 43.478 8.89 0.00 42.13 3.85
1633 4738 4.084849 GGATCTGATTCAGCGTATTTCGTG 60.085 45.833 8.89 0.00 42.13 4.35
1645 4761 4.327898 GCGTATTTCGTGTGTCATTCCTTA 59.672 41.667 0.00 0.00 42.13 2.69
1682 4799 6.054941 TCTTGTTGCAGACTGAATTTGTCTA 58.945 36.000 6.65 0.00 42.21 2.59
1683 4800 6.712095 TCTTGTTGCAGACTGAATTTGTCTAT 59.288 34.615 6.65 0.00 42.21 1.98
1684 4801 6.882610 TGTTGCAGACTGAATTTGTCTATT 57.117 33.333 6.65 0.00 42.21 1.73
1685 4802 7.275888 TGTTGCAGACTGAATTTGTCTATTT 57.724 32.000 6.65 0.00 42.21 1.40
1686 4803 7.715657 TGTTGCAGACTGAATTTGTCTATTTT 58.284 30.769 6.65 0.00 42.21 1.82
1687 4804 8.196771 TGTTGCAGACTGAATTTGTCTATTTTT 58.803 29.630 6.65 0.00 42.21 1.94
1808 4955 5.391950 GCGTGAATTGCTATTCCTTTCTTCA 60.392 40.000 16.61 0.00 39.56 3.02
1933 5134 4.281435 GGGCTACCTTTCTAGTCTGTATCC 59.719 50.000 0.00 0.00 0.00 2.59
1979 5646 2.317040 GGGTTCTCCTCATCGTCCATA 58.683 52.381 0.00 0.00 0.00 2.74
2050 5724 2.065993 ATCGGTTCTCACTTGACGTG 57.934 50.000 0.00 0.00 45.18 4.49
2138 5815 0.320374 AGCTGCAAAGTACTACGCCA 59.680 50.000 12.51 0.86 0.00 5.69
2140 5817 1.327764 GCTGCAAAGTACTACGCCATC 59.672 52.381 12.51 0.77 0.00 3.51
2155 5832 1.001181 GCCATCCATGTGCACAACTTT 59.999 47.619 25.72 3.79 0.00 2.66
2158 5835 3.742369 CCATCCATGTGCACAACTTTTTC 59.258 43.478 25.72 0.00 0.00 2.29
2189 5866 9.194271 TGGTGTGTAAAGTTTAACAAAGTTTTC 57.806 29.630 9.13 5.93 40.20 2.29
2337 6015 5.809001 TGGGGAAGATGCTAATATGCTTAG 58.191 41.667 0.00 0.00 0.00 2.18
2729 6419 4.022603 ACAGTACATGCATTATGCCCAAA 58.977 39.130 15.06 0.00 44.23 3.28
3166 6998 7.337689 TGCTGACTCTTGCTGAATGTTTAATAT 59.662 33.333 0.00 0.00 0.00 1.28
3255 7087 3.608707 GCCATATGATGAGAAGCTTTGCG 60.609 47.826 3.65 0.00 0.00 4.85
3351 7195 4.455877 GCTAAGTCAAAGGCAAAGAAGCTA 59.544 41.667 0.00 0.00 34.17 3.32
3482 7347 2.378547 TGGCAATAGAAGGGTTCAAGGT 59.621 45.455 0.00 0.00 0.00 3.50
3603 7468 2.717580 TTGTGGTGCGTACTAGTCAG 57.282 50.000 0.00 0.00 0.00 3.51
3869 7786 9.915629 GATATATCAAGTACATCCGGAATATCC 57.084 37.037 9.01 0.00 0.00 2.59
3970 7887 3.923013 GCAGCCATACATGCCACA 58.077 55.556 0.00 0.00 36.41 4.17
4258 8187 3.763057 AGGAAAGGTTAACCCATCACAC 58.237 45.455 21.30 7.32 36.42 3.82
4279 8208 4.466370 CACATTGGGAAGGTAGAGTCAGTA 59.534 45.833 0.00 0.00 0.00 2.74
4452 8384 0.323302 TGCGCATCCAAAGAGGTACA 59.677 50.000 5.66 0.00 39.02 2.90
4458 8390 4.439057 GCATCCAAAGAGGTACAACGATA 58.561 43.478 0.00 0.00 39.02 2.92
4545 8607 3.807622 TCCAGTCTAACAAACGCTCTTTG 59.192 43.478 2.95 2.95 35.64 2.77
4601 8666 3.641436 TGGTAGTGAAGAAGAAGCTGACA 59.359 43.478 0.00 0.00 0.00 3.58
4775 8967 0.376152 CTGCCAGTTGATAGCTTGCG 59.624 55.000 0.00 0.00 0.00 4.85
4776 8968 1.063166 GCCAGTTGATAGCTTGCGC 59.937 57.895 0.00 0.00 0.00 6.09
4777 8969 1.647545 GCCAGTTGATAGCTTGCGCA 61.648 55.000 5.66 5.66 39.10 6.09
4778 8970 1.019673 CCAGTTGATAGCTTGCGCAT 58.980 50.000 12.75 0.00 39.10 4.73
4779 8971 1.003116 CCAGTTGATAGCTTGCGCATC 60.003 52.381 12.75 5.85 39.10 3.91
4783 8992 2.028420 TGATAGCTTGCGCATCAGTT 57.972 45.000 12.75 7.39 39.10 3.16
4817 9026 8.970691 TTTCTAGATTGCTAAATGTTTTCTGC 57.029 30.769 0.00 0.00 0.00 4.26
4910 9119 1.227380 CCTAGCCATGCAGGACGTC 60.227 63.158 7.13 7.13 41.22 4.34
4954 9163 0.734253 GATGACGACGAGCAAGCTGT 60.734 55.000 0.00 0.00 0.00 4.40
5036 9245 3.399181 GATGCCGTGGTGGAGGGA 61.399 66.667 0.00 0.00 42.00 4.20
5058 9267 0.763035 GTACCACCACAACCTGGACT 59.237 55.000 0.00 0.00 43.95 3.85
5145 9354 0.486879 ACCCATGGGAAGAAAAGCCA 59.513 50.000 38.07 0.00 38.96 4.75
5171 9380 4.074970 GTCCTGTGAATCAGACACCATTT 58.925 43.478 0.00 0.00 46.27 2.32
5221 9438 1.295423 TGGCGCTTCCAGTTACTCC 59.705 57.895 7.64 0.00 40.72 3.85
5222 9439 1.449778 GGCGCTTCCAGTTACTCCC 60.450 63.158 7.64 0.00 34.01 4.30
5223 9440 1.449778 GCGCTTCCAGTTACTCCCC 60.450 63.158 0.00 0.00 0.00 4.81
5224 9441 1.221021 CGCTTCCAGTTACTCCCCC 59.779 63.158 0.00 0.00 0.00 5.40
5240 9457 2.924757 CCCCCGTTCCTAAATACTCC 57.075 55.000 0.00 0.00 0.00 3.85
5241 9458 1.419012 CCCCCGTTCCTAAATACTCCC 59.581 57.143 0.00 0.00 0.00 4.30
5242 9459 2.405559 CCCCGTTCCTAAATACTCCCT 58.594 52.381 0.00 0.00 0.00 4.20
5243 9460 2.367894 CCCCGTTCCTAAATACTCCCTC 59.632 54.545 0.00 0.00 0.00 4.30
5244 9461 3.306613 CCCGTTCCTAAATACTCCCTCT 58.693 50.000 0.00 0.00 0.00 3.69
5245 9462 3.069729 CCCGTTCCTAAATACTCCCTCTG 59.930 52.174 0.00 0.00 0.00 3.35
5246 9463 3.705072 CCGTTCCTAAATACTCCCTCTGT 59.295 47.826 0.00 0.00 0.00 3.41
5247 9464 4.891756 CCGTTCCTAAATACTCCCTCTGTA 59.108 45.833 0.00 0.00 0.00 2.74
5248 9465 5.221204 CCGTTCCTAAATACTCCCTCTGTAC 60.221 48.000 0.00 0.00 0.00 2.90
5249 9466 5.221204 CGTTCCTAAATACTCCCTCTGTACC 60.221 48.000 0.00 0.00 0.00 3.34
5250 9467 4.467769 TCCTAAATACTCCCTCTGTACCG 58.532 47.826 0.00 0.00 0.00 4.02
5251 9468 4.166725 TCCTAAATACTCCCTCTGTACCGA 59.833 45.833 0.00 0.00 0.00 4.69
5252 9469 4.891756 CCTAAATACTCCCTCTGTACCGAA 59.108 45.833 0.00 0.00 0.00 4.30
5253 9470 5.361857 CCTAAATACTCCCTCTGTACCGAAA 59.638 44.000 0.00 0.00 0.00 3.46
5254 9471 5.952347 AAATACTCCCTCTGTACCGAAAT 57.048 39.130 0.00 0.00 0.00 2.17
5255 9472 7.232127 CCTAAATACTCCCTCTGTACCGAAATA 59.768 40.741 0.00 0.00 0.00 1.40
5256 9473 7.427989 AAATACTCCCTCTGTACCGAAATAA 57.572 36.000 0.00 0.00 0.00 1.40
5257 9474 7.613551 AATACTCCCTCTGTACCGAAATAAT 57.386 36.000 0.00 0.00 0.00 1.28
5258 9475 5.952347 ACTCCCTCTGTACCGAAATAATT 57.048 39.130 0.00 0.00 0.00 1.40
5259 9476 5.671493 ACTCCCTCTGTACCGAAATAATTG 58.329 41.667 0.00 0.00 0.00 2.32
5260 9477 5.189145 ACTCCCTCTGTACCGAAATAATTGT 59.811 40.000 0.00 0.00 0.00 2.71
5261 9478 5.667466 TCCCTCTGTACCGAAATAATTGTC 58.333 41.667 0.00 0.00 0.00 3.18
5262 9479 4.506654 CCCTCTGTACCGAAATAATTGTCG 59.493 45.833 0.00 0.00 37.01 4.35
5263 9480 4.025979 CCTCTGTACCGAAATAATTGTCGC 60.026 45.833 0.00 0.00 35.93 5.19
5264 9481 4.751060 TCTGTACCGAAATAATTGTCGCT 58.249 39.130 0.00 0.00 35.93 4.93
5265 9482 4.565166 TCTGTACCGAAATAATTGTCGCTG 59.435 41.667 0.00 0.00 35.93 5.18
5266 9483 3.619483 TGTACCGAAATAATTGTCGCTGG 59.381 43.478 0.00 0.00 35.93 4.85
5267 9484 2.980568 ACCGAAATAATTGTCGCTGGA 58.019 42.857 3.30 0.00 35.93 3.86
5268 9485 2.936498 ACCGAAATAATTGTCGCTGGAG 59.064 45.455 3.30 0.00 35.93 3.86
5269 9486 2.936498 CCGAAATAATTGTCGCTGGAGT 59.064 45.455 3.30 0.00 35.93 3.85
5270 9487 4.116961 CCGAAATAATTGTCGCTGGAGTA 58.883 43.478 3.30 0.00 35.93 2.59
5271 9488 4.209288 CCGAAATAATTGTCGCTGGAGTAG 59.791 45.833 3.30 0.00 35.93 2.57
5281 9498 2.743195 CTGGAGTAGCTGCGACAAC 58.257 57.895 15.17 7.63 0.00 3.32
5282 9499 0.244994 CTGGAGTAGCTGCGACAACT 59.755 55.000 15.17 7.57 0.00 3.16
5283 9500 1.472878 CTGGAGTAGCTGCGACAACTA 59.527 52.381 15.17 5.96 0.00 2.24
5284 9501 2.099921 CTGGAGTAGCTGCGACAACTAT 59.900 50.000 15.17 0.00 0.00 2.12
5285 9502 2.496070 TGGAGTAGCTGCGACAACTATT 59.504 45.455 15.17 0.00 0.00 1.73
5286 9503 3.056107 TGGAGTAGCTGCGACAACTATTT 60.056 43.478 15.17 0.00 0.00 1.40
5287 9504 3.552294 GGAGTAGCTGCGACAACTATTTC 59.448 47.826 15.17 2.10 0.00 2.17
5288 9505 3.179830 AGTAGCTGCGACAACTATTTCG 58.820 45.455 15.17 0.00 38.31 3.46
5289 9506 1.359848 AGCTGCGACAACTATTTCGG 58.640 50.000 0.00 0.00 35.73 4.30
5290 9507 1.076332 GCTGCGACAACTATTTCGGT 58.924 50.000 0.00 0.00 35.73 4.69
5291 9508 2.094390 AGCTGCGACAACTATTTCGGTA 60.094 45.455 0.00 0.00 35.73 4.02
5292 9509 2.028883 GCTGCGACAACTATTTCGGTAC 59.971 50.000 0.00 0.00 35.73 3.34
5293 9510 3.247442 CTGCGACAACTATTTCGGTACA 58.753 45.455 0.00 0.00 35.73 2.90
5294 9511 3.247442 TGCGACAACTATTTCGGTACAG 58.753 45.455 0.00 0.00 35.73 2.74
5295 9512 3.057386 TGCGACAACTATTTCGGTACAGA 60.057 43.478 0.00 0.00 35.73 3.41
5296 9513 3.546670 GCGACAACTATTTCGGTACAGAG 59.453 47.826 0.00 0.00 35.73 3.35
5297 9514 4.103357 CGACAACTATTTCGGTACAGAGG 58.897 47.826 0.00 0.00 0.00 3.69
5298 9515 4.430908 GACAACTATTTCGGTACAGAGGG 58.569 47.826 0.00 0.00 0.00 4.30
5299 9516 4.091549 ACAACTATTTCGGTACAGAGGGA 58.908 43.478 0.00 0.00 0.00 4.20
5300 9517 4.159879 ACAACTATTTCGGTACAGAGGGAG 59.840 45.833 0.00 0.00 0.00 4.30
5301 9518 3.978610 ACTATTTCGGTACAGAGGGAGT 58.021 45.455 0.00 0.00 0.00 3.85
5302 9519 5.121380 ACTATTTCGGTACAGAGGGAGTA 57.879 43.478 0.00 0.00 0.00 2.59
5303 9520 5.703310 ACTATTTCGGTACAGAGGGAGTAT 58.297 41.667 0.00 0.00 0.00 2.12
5304 9521 6.845908 ACTATTTCGGTACAGAGGGAGTATA 58.154 40.000 0.00 0.00 0.00 1.47
5305 9522 7.293073 ACTATTTCGGTACAGAGGGAGTATAA 58.707 38.462 0.00 0.00 0.00 0.98
5306 9523 6.651975 ATTTCGGTACAGAGGGAGTATAAG 57.348 41.667 0.00 0.00 0.00 1.73
5307 9524 4.785346 TCGGTACAGAGGGAGTATAAGT 57.215 45.455 0.00 0.00 0.00 2.24
5308 9525 4.712476 TCGGTACAGAGGGAGTATAAGTC 58.288 47.826 0.00 0.00 0.00 3.01
5309 9526 4.411540 TCGGTACAGAGGGAGTATAAGTCT 59.588 45.833 0.00 0.00 0.00 3.24
5310 9527 5.104193 TCGGTACAGAGGGAGTATAAGTCTT 60.104 44.000 0.00 0.00 0.00 3.01
5311 9528 5.593502 CGGTACAGAGGGAGTATAAGTCTTT 59.406 44.000 0.00 0.00 0.00 2.52
5312 9529 6.238703 CGGTACAGAGGGAGTATAAGTCTTTC 60.239 46.154 0.00 0.00 0.00 2.62
5313 9530 6.834969 GGTACAGAGGGAGTATAAGTCTTTCT 59.165 42.308 0.00 0.00 0.00 2.52
5314 9531 7.997803 GGTACAGAGGGAGTATAAGTCTTTCTA 59.002 40.741 0.00 0.00 0.00 2.10
5315 9532 9.406113 GTACAGAGGGAGTATAAGTCTTTCTAA 57.594 37.037 0.00 0.00 0.00 2.10
5316 9533 8.896722 ACAGAGGGAGTATAAGTCTTTCTAAA 57.103 34.615 0.00 0.00 0.00 1.85
5317 9534 8.973182 ACAGAGGGAGTATAAGTCTTTCTAAAG 58.027 37.037 0.00 0.00 37.36 1.85
5318 9535 9.191479 CAGAGGGAGTATAAGTCTTTCTAAAGA 57.809 37.037 1.00 1.00 42.41 2.52
5319 9536 9.945633 AGAGGGAGTATAAGTCTTTCTAAAGAT 57.054 33.333 8.31 0.00 45.83 2.40
5322 9539 9.767228 GGGAGTATAAGTCTTTCTAAAGATTCC 57.233 37.037 8.31 7.27 45.83 3.01
5331 9548 9.620259 AGTCTTTCTAAAGATTCCAATATGGAC 57.380 33.333 8.31 0.00 43.23 4.02
5332 9549 9.620259 GTCTTTCTAAAGATTCCAATATGGACT 57.380 33.333 8.31 0.00 43.23 3.85
5342 9559 5.977489 TCCAATATGGACTATGTACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
5343 9560 4.219944 TCCAATATGGACTATGTACGGAGC 59.780 45.833 0.00 0.00 42.67 4.70
5344 9561 4.021456 CCAATATGGACTATGTACGGAGCA 60.021 45.833 0.00 0.00 40.96 4.26
5345 9562 5.510690 CCAATATGGACTATGTACGGAGCAA 60.511 44.000 0.00 0.00 40.96 3.91
5346 9563 5.801531 ATATGGACTATGTACGGAGCAAA 57.198 39.130 0.00 0.00 0.00 3.68
5347 9564 3.965379 TGGACTATGTACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
5348 9565 4.481368 TGGACTATGTACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
5349 9566 4.188462 TGGACTATGTACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
5350 9567 4.081365 TGGACTATGTACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
5351 9568 4.508124 GGACTATGTACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
5352 9569 5.086104 ACTATGTACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
5353 9570 4.870426 ACTATGTACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
5354 9571 3.394674 TGTACGGAGCAAAATGAGTGA 57.605 42.857 0.00 0.00 0.00 3.41
5355 9572 3.734463 TGTACGGAGCAAAATGAGTGAA 58.266 40.909 0.00 0.00 0.00 3.18
5356 9573 4.323417 TGTACGGAGCAAAATGAGTGAAT 58.677 39.130 0.00 0.00 0.00 2.57
5357 9574 4.391830 TGTACGGAGCAAAATGAGTGAATC 59.608 41.667 0.00 0.00 0.00 2.52
5358 9575 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
5359 9576 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
5360 9577 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
5361 9578 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
5362 9579 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
5374 9591 6.553524 AGTGAATCTACACTCTAAACTACGC 58.446 40.000 0.00 0.00 46.36 4.42
5375 9592 5.742926 GTGAATCTACACTCTAAACTACGCC 59.257 44.000 0.00 0.00 37.73 5.68
5376 9593 5.651139 TGAATCTACACTCTAAACTACGCCT 59.349 40.000 0.00 0.00 0.00 5.52
5377 9594 6.825213 TGAATCTACACTCTAAACTACGCCTA 59.175 38.462 0.00 0.00 0.00 3.93
5378 9595 6.864360 ATCTACACTCTAAACTACGCCTAG 57.136 41.667 0.00 0.00 0.00 3.02
5379 9596 5.121811 TCTACACTCTAAACTACGCCTAGG 58.878 45.833 3.67 3.67 0.00 3.02
5380 9597 3.694926 ACACTCTAAACTACGCCTAGGT 58.305 45.455 11.31 0.00 0.00 3.08
5381 9598 4.848357 ACACTCTAAACTACGCCTAGGTA 58.152 43.478 11.31 0.00 0.00 3.08
5382 9599 4.637977 ACACTCTAAACTACGCCTAGGTAC 59.362 45.833 11.31 0.00 0.00 3.34
5383 9600 4.880696 CACTCTAAACTACGCCTAGGTACT 59.119 45.833 11.31 0.00 46.37 2.73
5384 9601 5.007528 CACTCTAAACTACGCCTAGGTACTC 59.992 48.000 11.31 0.00 41.75 2.59
5385 9602 4.455606 TCTAAACTACGCCTAGGTACTCC 58.544 47.826 11.31 0.00 41.75 3.85
5386 9603 2.814805 AACTACGCCTAGGTACTCCA 57.185 50.000 11.31 0.00 41.75 3.86
5387 9604 3.309600 AACTACGCCTAGGTACTCCAT 57.690 47.619 11.31 0.00 41.75 3.41
5388 9605 4.443978 AACTACGCCTAGGTACTCCATA 57.556 45.455 11.31 0.00 41.75 2.74
5389 9606 4.654389 ACTACGCCTAGGTACTCCATAT 57.346 45.455 11.31 0.00 41.75 1.78
5390 9607 4.995536 ACTACGCCTAGGTACTCCATATT 58.004 43.478 11.31 0.00 41.75 1.28
5391 9608 4.765856 ACTACGCCTAGGTACTCCATATTG 59.234 45.833 11.31 0.00 41.75 1.90
5392 9609 3.840991 ACGCCTAGGTACTCCATATTGA 58.159 45.455 11.31 0.00 41.75 2.57
5393 9610 4.220724 ACGCCTAGGTACTCCATATTGAA 58.779 43.478 11.31 0.00 41.75 2.69
5394 9611 4.652421 ACGCCTAGGTACTCCATATTGAAA 59.348 41.667 11.31 0.00 41.75 2.69
5395 9612 5.307196 ACGCCTAGGTACTCCATATTGAAAT 59.693 40.000 11.31 0.00 41.75 2.17
5396 9613 5.869888 CGCCTAGGTACTCCATATTGAAATC 59.130 44.000 11.31 0.00 41.75 2.17
5397 9614 6.295349 CGCCTAGGTACTCCATATTGAAATCT 60.295 42.308 11.31 0.00 41.75 2.40
5398 9615 7.100409 GCCTAGGTACTCCATATTGAAATCTC 58.900 42.308 11.31 0.00 41.75 2.75
5399 9616 7.038658 GCCTAGGTACTCCATATTGAAATCTCT 60.039 40.741 11.31 0.00 41.75 3.10
5400 9617 9.535170 CCTAGGTACTCCATATTGAAATCTCTA 57.465 37.037 0.00 0.00 41.75 2.43
5403 9620 9.661954 AGGTACTCCATATTGAAATCTCTAGAA 57.338 33.333 0.00 0.00 35.89 2.10
5426 9643 8.422566 AGAAAGACTTATATTTAGGAACGGAGG 58.577 37.037 0.00 0.00 0.00 4.30
5427 9644 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
5428 9645 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
5429 9646 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
5525 9742 7.865706 CTTGTCCAAGCTTACCAAATACTAT 57.134 36.000 0.00 0.00 0.00 2.12
5526 9743 8.958119 CTTGTCCAAGCTTACCAAATACTATA 57.042 34.615 0.00 0.00 0.00 1.31
5527 9744 8.958119 TTGTCCAAGCTTACCAAATACTATAG 57.042 34.615 0.00 0.00 0.00 1.31
5528 9745 7.506114 TGTCCAAGCTTACCAAATACTATAGG 58.494 38.462 0.00 0.00 0.00 2.57
5529 9746 7.346175 TGTCCAAGCTTACCAAATACTATAGGA 59.654 37.037 0.00 0.00 0.00 2.94
5530 9747 8.208903 GTCCAAGCTTACCAAATACTATAGGAA 58.791 37.037 0.00 0.00 0.00 3.36
5531 9748 8.945193 TCCAAGCTTACCAAATACTATAGGAAT 58.055 33.333 0.00 0.00 0.00 3.01
5532 9749 9.220767 CCAAGCTTACCAAATACTATAGGAATC 57.779 37.037 0.00 0.00 0.00 2.52
5535 9752 8.598041 AGCTTACCAAATACTATAGGAATCTGG 58.402 37.037 4.43 6.45 0.00 3.86
5536 9753 8.376270 GCTTACCAAATACTATAGGAATCTGGT 58.624 37.037 15.68 15.68 38.22 4.00
5540 9757 9.448587 ACCAAATACTATAGGAATCTGGTACTT 57.551 33.333 11.66 0.00 32.97 2.24
5543 9760 9.780186 AAATACTATAGGAATCTGGTACTTTGC 57.220 33.333 4.43 0.00 0.00 3.68
5544 9761 6.176014 ACTATAGGAATCTGGTACTTTGCC 57.824 41.667 4.43 0.00 0.00 4.52
5545 9762 2.403252 AGGAATCTGGTACTTTGCCG 57.597 50.000 0.00 0.00 0.00 5.69
5631 9873 0.983378 AATAGGCGCAGGAGGTCCTT 60.983 55.000 10.83 0.00 46.09 3.36
5633 9875 4.475135 GGCGCAGGAGGTCCTTCC 62.475 72.222 10.83 0.00 46.09 3.46
5638 9880 1.545651 CGCAGGAGGTCCTTCCTTTTT 60.546 52.381 7.05 0.00 45.35 1.94
5711 9954 1.813102 TTTTCACCCAAATTGGCCCT 58.187 45.000 6.48 0.00 35.79 5.19
5735 9978 7.201461 CCTGCTGGATTCGTTTTTAAAATCATG 60.201 37.037 2.92 0.00 32.27 3.07
5798 10042 4.039366 GGTCTCATATTTCTAAGCGGAGGT 59.961 45.833 0.00 0.00 44.60 3.85
5799 10043 4.985409 GTCTCATATTTCTAAGCGGAGGTG 59.015 45.833 0.00 0.00 39.47 4.00
5804 10048 1.629043 TTCTAAGCGGAGGTGACTGT 58.371 50.000 0.00 0.00 44.43 3.55
5830 10080 6.231211 AGCTGTAGTTATTAGCAACAGTTGT 58.769 36.000 14.88 4.63 39.74 3.32
5831 10081 7.383687 AGCTGTAGTTATTAGCAACAGTTGTA 58.616 34.615 14.88 3.71 39.74 2.41
5832 10082 7.545965 AGCTGTAGTTATTAGCAACAGTTGTAG 59.454 37.037 14.88 0.00 39.74 2.74
5833 10083 7.331193 GCTGTAGTTATTAGCAACAGTTGTAGT 59.669 37.037 14.88 5.84 39.74 2.73
5834 10084 9.204570 CTGTAGTTATTAGCAACAGTTGTAGTT 57.795 33.333 14.88 1.78 34.28 2.24
5870 10124 5.105063 GCAACAAATTCAGCTAATTCCTCC 58.895 41.667 0.00 0.00 36.76 4.30
5879 10133 4.222145 TCAGCTAATTCCTCCGTTGTAACT 59.778 41.667 0.00 0.00 0.00 2.24
5880 10134 4.935808 CAGCTAATTCCTCCGTTGTAACTT 59.064 41.667 0.00 0.00 0.00 2.66
5881 10135 4.935808 AGCTAATTCCTCCGTTGTAACTTG 59.064 41.667 0.00 0.00 0.00 3.16
5902 10159 7.205297 ACTTGTTATTATGAGGATGCAAATGC 58.795 34.615 0.00 0.00 42.50 3.56
5904 10161 5.597594 TGTTATTATGAGGATGCAAATGCCA 59.402 36.000 2.46 0.00 41.18 4.92
5922 10179 3.005684 TGCCATGTGATGAAACCAAGAAC 59.994 43.478 0.00 0.00 0.00 3.01
5923 10180 3.614870 GCCATGTGATGAAACCAAGAACC 60.615 47.826 0.00 0.00 0.00 3.62
5924 10181 3.573538 CCATGTGATGAAACCAAGAACCA 59.426 43.478 0.00 0.00 0.00 3.67
5925 10182 4.039004 CCATGTGATGAAACCAAGAACCAA 59.961 41.667 0.00 0.00 0.00 3.67
5926 10183 4.916983 TGTGATGAAACCAAGAACCAAG 57.083 40.909 0.00 0.00 0.00 3.61
5927 10184 4.531854 TGTGATGAAACCAAGAACCAAGA 58.468 39.130 0.00 0.00 0.00 3.02
5928 10185 4.952957 TGTGATGAAACCAAGAACCAAGAA 59.047 37.500 0.00 0.00 0.00 2.52
5960 10218 9.492730 AAGATAAAGTCATTATGGGGAAAATGT 57.507 29.630 0.00 0.00 34.30 2.71
5961 10219 9.136323 AGATAAAGTCATTATGGGGAAAATGTC 57.864 33.333 0.00 0.00 34.30 3.06
5963 10221 4.855340 AGTCATTATGGGGAAAATGTCGT 58.145 39.130 0.00 0.00 35.16 4.34
6096 10354 9.904198 TCCAATATATTGATGAAACTGAGAACA 57.096 29.630 24.17 0.00 40.14 3.18
6101 10359 5.679734 TTGATGAAACTGAGAACAGAAGC 57.320 39.130 0.00 0.00 46.03 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.484285 TCAATATACGAACGTGCGTGATG 59.516 43.478 31.46 21.75 45.23 3.07
3 4 3.103007 CTCAATATACGAACGTGCGTGA 58.897 45.455 31.46 19.12 45.23 4.35
4 5 2.215587 CCTCAATATACGAACGTGCGTG 59.784 50.000 31.46 14.41 45.23 5.34
6 7 2.456989 ACCTCAATATACGAACGTGCG 58.543 47.619 16.06 16.06 37.29 5.34
14 15 6.692486 AGGAAATAGCTGACCTCAATATACG 58.308 40.000 0.00 0.00 0.00 3.06
20 21 4.164030 TGCATAGGAAATAGCTGACCTCAA 59.836 41.667 0.00 0.00 34.42 3.02
27 28 5.704053 TGTCATCATGCATAGGAAATAGCTG 59.296 40.000 0.00 0.00 0.00 4.24
28 29 5.872963 TGTCATCATGCATAGGAAATAGCT 58.127 37.500 0.00 0.00 0.00 3.32
56 57 3.443052 TGCATGGAAAATGGATCACCTT 58.557 40.909 0.00 0.00 37.04 3.50
77 78 6.296803 AGTATGTCATCTCATCATGCAACAT 58.703 36.000 0.00 0.00 30.38 2.71
163 164 6.109359 AGCACGCTCATTCTTCTTAGTAATT 58.891 36.000 0.00 0.00 0.00 1.40
170 171 4.574599 AAAAAGCACGCTCATTCTTCTT 57.425 36.364 0.00 0.00 0.00 2.52
226 232 7.040340 TGGTTGAAATTCGTAAGGCTCATTTAA 60.040 33.333 0.00 0.00 38.47 1.52
227 233 6.431543 TGGTTGAAATTCGTAAGGCTCATTTA 59.568 34.615 0.00 0.00 38.47 1.40
262 268 2.418368 TCCCTATGGTTGTGTGCATC 57.582 50.000 0.00 0.00 0.00 3.91
265 271 2.128771 ACATCCCTATGGTTGTGTGC 57.871 50.000 0.42 0.00 41.89 4.57
416 426 9.853555 AGCGTGTGAATTTTTATGATGAAATAA 57.146 25.926 0.00 0.00 0.00 1.40
428 438 5.067283 AGGAAGTACAAGCGTGTGAATTTTT 59.933 36.000 15.96 0.95 38.82 1.94
444 454 5.485620 AGTAATTTGGAACGGAGGAAGTAC 58.514 41.667 0.00 0.00 0.00 2.73
446 456 4.576879 GAGTAATTTGGAACGGAGGAAGT 58.423 43.478 0.00 0.00 0.00 3.01
447 457 3.617263 CGAGTAATTTGGAACGGAGGAAG 59.383 47.826 0.00 0.00 0.00 3.46
449 459 2.564062 ACGAGTAATTTGGAACGGAGGA 59.436 45.455 0.00 0.00 0.00 3.71
450 460 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
451 461 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
452 462 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
453 463 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
454 464 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
455 465 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
457 467 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
458 468 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
459 469 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
460 470 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
462 472 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
463 473 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
464 474 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
465 475 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
466 476 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
468 478 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
471 481 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
472 482 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
497 507 8.696374 CGGGTATGGATGTATCTAGATGTATTT 58.304 37.037 15.79 0.00 0.00 1.40
501 511 4.402793 GCGGGTATGGATGTATCTAGATGT 59.597 45.833 15.79 1.25 0.00 3.06
502 512 4.498177 CGCGGGTATGGATGTATCTAGATG 60.498 50.000 15.79 0.00 0.00 2.90
503 513 3.632604 CGCGGGTATGGATGTATCTAGAT 59.367 47.826 10.73 10.73 0.00 1.98
504 514 3.014623 CGCGGGTATGGATGTATCTAGA 58.985 50.000 0.00 0.00 0.00 2.43
505 515 3.014623 TCGCGGGTATGGATGTATCTAG 58.985 50.000 6.13 0.00 0.00 2.43
506 516 2.751259 GTCGCGGGTATGGATGTATCTA 59.249 50.000 6.13 0.00 0.00 1.98
507 517 1.544691 GTCGCGGGTATGGATGTATCT 59.455 52.381 6.13 0.00 0.00 1.98
508 518 1.271379 TGTCGCGGGTATGGATGTATC 59.729 52.381 6.13 0.00 0.00 2.24
510 520 1.067974 CTTGTCGCGGGTATGGATGTA 59.932 52.381 6.13 0.00 0.00 2.29
513 523 1.405872 TACTTGTCGCGGGTATGGAT 58.594 50.000 6.13 0.00 0.00 3.41
514 524 1.184431 TTACTTGTCGCGGGTATGGA 58.816 50.000 6.13 0.00 0.00 3.41
515 525 2.234300 ATTACTTGTCGCGGGTATGG 57.766 50.000 6.13 0.00 0.00 2.74
516 526 3.191669 TGAATTACTTGTCGCGGGTATG 58.808 45.455 6.13 0.00 0.00 2.39
517 527 3.530265 TGAATTACTTGTCGCGGGTAT 57.470 42.857 6.13 0.00 0.00 2.73
519 529 2.172851 TTGAATTACTTGTCGCGGGT 57.827 45.000 6.13 3.16 0.00 5.28
520 530 3.231160 GTTTTGAATTACTTGTCGCGGG 58.769 45.455 6.13 0.00 0.00 6.13
522 532 2.900046 CCGTTTTGAATTACTTGTCGCG 59.100 45.455 0.00 0.00 0.00 5.87
523 533 4.136517 TCCGTTTTGAATTACTTGTCGC 57.863 40.909 0.00 0.00 0.00 5.19
524 534 4.378046 CCCTCCGTTTTGAATTACTTGTCG 60.378 45.833 0.00 0.00 0.00 4.35
525 535 4.758165 TCCCTCCGTTTTGAATTACTTGTC 59.242 41.667 0.00 0.00 0.00 3.18
526 536 4.721132 TCCCTCCGTTTTGAATTACTTGT 58.279 39.130 0.00 0.00 0.00 3.16
527 537 4.760204 ACTCCCTCCGTTTTGAATTACTTG 59.240 41.667 0.00 0.00 0.00 3.16
528 538 4.981812 ACTCCCTCCGTTTTGAATTACTT 58.018 39.130 0.00 0.00 0.00 2.24
532 542 4.903045 TCTACTCCCTCCGTTTTGAATT 57.097 40.909 0.00 0.00 0.00 2.17
533 543 4.903045 TTCTACTCCCTCCGTTTTGAAT 57.097 40.909 0.00 0.00 0.00 2.57
534 544 4.693042 TTTCTACTCCCTCCGTTTTGAA 57.307 40.909 0.00 0.00 0.00 2.69
535 545 4.141665 TGTTTTCTACTCCCTCCGTTTTGA 60.142 41.667 0.00 0.00 0.00 2.69
536 546 4.131596 TGTTTTCTACTCCCTCCGTTTTG 58.868 43.478 0.00 0.00 0.00 2.44
537 547 4.426736 TGTTTTCTACTCCCTCCGTTTT 57.573 40.909 0.00 0.00 0.00 2.43
538 548 4.565028 GGATGTTTTCTACTCCCTCCGTTT 60.565 45.833 0.00 0.00 0.00 3.60
540 550 2.500504 GGATGTTTTCTACTCCCTCCGT 59.499 50.000 0.00 0.00 0.00 4.69
541 551 2.158943 GGGATGTTTTCTACTCCCTCCG 60.159 54.545 0.00 0.00 39.35 4.63
542 552 2.158943 CGGGATGTTTTCTACTCCCTCC 60.159 54.545 5.04 0.00 39.85 4.30
544 554 2.829023 TCGGGATGTTTTCTACTCCCT 58.171 47.619 5.04 0.00 39.85 4.20
545 555 3.467803 CATCGGGATGTTTTCTACTCCC 58.532 50.000 0.45 0.00 39.20 4.30
546 556 2.872858 GCATCGGGATGTTTTCTACTCC 59.127 50.000 10.14 0.00 40.80 3.85
547 557 3.309954 GTGCATCGGGATGTTTTCTACTC 59.690 47.826 10.14 0.00 40.80 2.59
548 558 3.270877 GTGCATCGGGATGTTTTCTACT 58.729 45.455 10.14 0.00 40.80 2.57
615 627 4.452114 GGAACCTGGATTTTGACAAAATGC 59.548 41.667 28.45 28.45 45.83 3.56
617 629 5.885449 TGGAACCTGGATTTTGACAAAAT 57.115 34.783 22.98 22.98 43.43 1.82
704 3264 1.762957 TCTCCTCCTCCCGCTTTTATG 59.237 52.381 0.00 0.00 0.00 1.90
733 3293 2.837291 CTCCCTCCCTCTCGCTGG 60.837 72.222 0.00 0.00 0.00 4.85
736 3296 4.144727 TCCCTCCCTCCCTCTCGC 62.145 72.222 0.00 0.00 0.00 5.03
737 3297 2.197324 CTCCCTCCCTCCCTCTCG 59.803 72.222 0.00 0.00 0.00 4.04
739 3299 1.156322 TTGTCTCCCTCCCTCCCTCT 61.156 60.000 0.00 0.00 0.00 3.69
740 3300 0.252742 TTTGTCTCCCTCCCTCCCTC 60.253 60.000 0.00 0.00 0.00 4.30
741 3301 0.423544 ATTTGTCTCCCTCCCTCCCT 59.576 55.000 0.00 0.00 0.00 4.20
856 3446 4.250305 AAGGCGGCAGGTGTCGTT 62.250 61.111 13.08 0.00 46.15 3.85
982 3589 3.512516 GCCTGCGCCTGGATCAAC 61.513 66.667 18.93 0.00 0.00 3.18
1140 3760 2.621115 GGAGGGGCAGAGGGGATA 59.379 66.667 0.00 0.00 0.00 2.59
1156 3806 1.619669 AGGGGTAGCAAAGAGGGGG 60.620 63.158 0.00 0.00 0.00 5.40
1212 3866 4.473520 CCAATCGGAGGCTGGCGT 62.474 66.667 0.00 0.00 0.00 5.68
1369 4428 5.350914 CCAAGAACTAGCATTCAGTCAAGAG 59.649 44.000 0.00 0.00 0.00 2.85
1371 4430 4.999950 ACCAAGAACTAGCATTCAGTCAAG 59.000 41.667 0.00 0.00 0.00 3.02
1374 4433 4.997395 TGAACCAAGAACTAGCATTCAGTC 59.003 41.667 0.00 0.00 0.00 3.51
1375 4434 4.973168 TGAACCAAGAACTAGCATTCAGT 58.027 39.130 0.00 0.00 0.00 3.41
1376 4435 5.240891 TCTGAACCAAGAACTAGCATTCAG 58.759 41.667 5.00 5.00 41.78 3.02
1377 4436 5.227569 TCTGAACCAAGAACTAGCATTCA 57.772 39.130 0.00 0.00 0.00 2.57
1394 4453 7.824289 CCTAACTACATCATTTGAGGTTCTGAA 59.176 37.037 2.96 0.00 39.91 3.02
1395 4454 7.331026 CCTAACTACATCATTTGAGGTTCTGA 58.669 38.462 2.96 0.00 39.91 3.27
1396 4455 6.037610 GCCTAACTACATCATTTGAGGTTCTG 59.962 42.308 2.96 0.00 39.91 3.02
1397 4456 6.116126 GCCTAACTACATCATTTGAGGTTCT 58.884 40.000 2.96 0.00 39.91 3.01
1398 4457 5.880332 TGCCTAACTACATCATTTGAGGTTC 59.120 40.000 2.96 0.00 39.91 3.62
1399 4458 5.815581 TGCCTAACTACATCATTTGAGGTT 58.184 37.500 2.96 1.01 39.91 3.50
1400 4459 5.435686 TGCCTAACTACATCATTTGAGGT 57.564 39.130 3.19 3.19 42.20 3.85
1401 4460 5.278169 GCATGCCTAACTACATCATTTGAGG 60.278 44.000 6.36 0.00 0.00 3.86
1443 4502 5.255397 TCCCATGTCAAAATTGTCCTACT 57.745 39.130 0.00 0.00 0.00 2.57
1451 4510 4.222336 TGTCACCTTCCCATGTCAAAATT 58.778 39.130 0.00 0.00 0.00 1.82
1509 4576 1.378514 GGGGAATTTGGCTCGAGCA 60.379 57.895 36.27 20.82 44.36 4.26
1516 4583 2.525105 TTGACCTAGGGGAATTTGGC 57.475 50.000 14.81 0.00 36.25 4.52
1522 4589 1.557832 CGGTGAATTGACCTAGGGGAA 59.442 52.381 14.81 5.41 33.35 3.97
1529 4601 3.495729 AGGGCGGTGAATTGACCT 58.504 55.556 12.50 0.00 39.40 3.85
1541 4613 2.691409 TTCTGTCTAATCCAAGGGCG 57.309 50.000 0.00 0.00 0.00 6.13
1632 4737 3.788227 AGCTTGGTAAGGAATGACACA 57.212 42.857 0.00 0.00 0.00 3.72
1633 4738 5.648092 ACAATAGCTTGGTAAGGAATGACAC 59.352 40.000 0.00 0.00 36.64 3.67
1645 4761 3.636300 TGCAACAAGAACAATAGCTTGGT 59.364 39.130 0.00 0.00 44.33 3.67
1684 4801 2.078392 GGCGGACGTATCCTTGAAAAA 58.922 47.619 0.00 0.00 43.73 1.94
1685 4802 1.002201 TGGCGGACGTATCCTTGAAAA 59.998 47.619 0.00 0.00 43.73 2.29
1686 4803 0.609151 TGGCGGACGTATCCTTGAAA 59.391 50.000 0.00 0.00 43.73 2.69
1687 4804 0.174845 CTGGCGGACGTATCCTTGAA 59.825 55.000 0.00 0.00 43.73 2.69
1688 4805 1.672854 CCTGGCGGACGTATCCTTGA 61.673 60.000 0.00 0.00 43.73 3.02
1689 4806 1.227263 CCTGGCGGACGTATCCTTG 60.227 63.158 0.00 0.00 43.73 3.61
1693 4810 0.956633 TACATCCTGGCGGACGTATC 59.043 55.000 0.00 0.00 43.51 2.24
1702 4819 2.613977 CGGGATCTTGATACATCCTGGC 60.614 54.545 0.00 0.00 40.64 4.85
1703 4820 2.899900 TCGGGATCTTGATACATCCTGG 59.100 50.000 6.89 0.00 43.44 4.45
1704 4821 4.607293 TTCGGGATCTTGATACATCCTG 57.393 45.455 0.89 0.89 44.29 3.86
1705 4822 5.832539 ATTTCGGGATCTTGATACATCCT 57.167 39.130 0.00 0.00 38.98 3.24
1706 4823 5.765182 ACAATTTCGGGATCTTGATACATCC 59.235 40.000 0.00 0.00 38.34 3.51
1709 4826 5.989477 AGACAATTTCGGGATCTTGATACA 58.011 37.500 0.00 0.00 0.00 2.29
1808 4955 7.014230 GTCTCTCTCATCAGAGCCTAATAAAGT 59.986 40.741 0.00 0.00 45.46 2.66
1933 5134 2.943690 CCAGAGCTCATGTCAATTCCAG 59.056 50.000 17.77 0.00 0.00 3.86
2013 5681 2.223688 CGATACCAGAGCTCAGGTCAAG 60.224 54.545 31.76 19.87 37.01 3.02
2050 5724 5.047802 TGACCAAATCAGAGCAAGGAAAATC 60.048 40.000 0.00 0.00 31.91 2.17
2138 5815 4.942761 AGAAAAAGTTGTGCACATGGAT 57.057 36.364 22.39 5.09 0.00 3.41
2140 5817 6.073657 CCAATAAGAAAAAGTTGTGCACATGG 60.074 38.462 22.39 16.01 0.00 3.66
2189 5866 1.270550 GTGCCAACAAGGGATGACAAG 59.729 52.381 0.00 0.00 41.14 3.16
2337 6015 3.057033 ACTTGCATCTGGAATTTCTGTGC 60.057 43.478 9.64 9.64 0.00 4.57
2813 6513 7.098477 TCAGAATAATTGGAAAAGGCACAATG 58.902 34.615 0.00 0.00 35.22 2.82
2953 6690 0.925558 TAGCCCATCCAGAAATGGCA 59.074 50.000 0.00 0.00 44.17 4.92
3064 6893 2.092429 TGGACCAGAAAGCAGTCAAAGT 60.092 45.455 0.00 0.00 31.99 2.66
3166 6998 3.292460 CCTGGGTAAAACAAACAGACCA 58.708 45.455 0.00 0.00 31.41 4.02
3255 7087 6.152492 AGAGAAGAGGATTTTGCTTTTCATCC 59.848 38.462 0.00 0.00 32.60 3.51
3351 7195 2.851263 TGGTATGAGAAACCGTTGCT 57.149 45.000 0.00 0.00 40.08 3.91
3482 7347 1.469703 CAATGACCATCTCGCTTTGCA 59.530 47.619 0.00 0.00 0.00 4.08
3869 7786 1.645710 AGGTATTCCTGGATAGCCCG 58.354 55.000 0.00 0.00 43.33 6.13
3970 7887 2.128035 CGACGAAGACAGCTGAAAACT 58.872 47.619 23.35 10.86 0.00 2.66
4258 8187 5.677319 TTACTGACTCTACCTTCCCAATG 57.323 43.478 0.00 0.00 0.00 2.82
4279 8208 5.391312 CGAAGGAACCAAATTGGAGATTT 57.609 39.130 20.25 1.73 40.96 2.17
4601 8666 1.145738 AGTTTCAGCATCAGGTGGGTT 59.854 47.619 0.00 0.00 43.32 4.11
4756 8833 0.376152 CGCAAGCTATCAACTGGCAG 59.624 55.000 14.16 14.16 33.37 4.85
4779 8971 6.985645 AGCAATCTAGAAAGCTCAGATAACTG 59.014 38.462 14.52 0.00 44.66 3.16
4783 8992 9.486497 CATTTAGCAATCTAGAAAGCTCAGATA 57.514 33.333 21.31 5.59 38.47 1.98
4817 9026 6.075762 TCAATCTGAAGACATTGGTTTGTG 57.924 37.500 0.00 0.00 0.00 3.33
4910 9119 2.271800 GAGCAGTTACCGTTCTCCATG 58.728 52.381 0.00 0.00 0.00 3.66
4954 9163 1.004560 CTCCTCTTGCTGAACCGCA 60.005 57.895 0.00 0.00 38.31 5.69
5036 9245 0.476771 CCAGGTTGTGGTGGTACCTT 59.523 55.000 14.36 0.00 40.24 3.50
5058 9267 5.359756 CATGTCCTTGGATATCGTGAAGAA 58.640 41.667 8.58 0.00 0.00 2.52
5145 9354 2.037772 GTGTCTGATTCACAGGACACCT 59.962 50.000 19.46 0.00 45.76 4.00
5200 9417 2.047655 TAACTGGAAGCGCCACCG 60.048 61.111 2.29 7.22 43.33 4.94
5221 9438 1.419012 GGGAGTATTTAGGAACGGGGG 59.581 57.143 0.00 0.00 0.00 5.40
5222 9439 2.367894 GAGGGAGTATTTAGGAACGGGG 59.632 54.545 0.00 0.00 0.00 5.73
5223 9440 3.069729 CAGAGGGAGTATTTAGGAACGGG 59.930 52.174 0.00 0.00 0.00 5.28
5224 9441 3.705072 ACAGAGGGAGTATTTAGGAACGG 59.295 47.826 0.00 0.00 0.00 4.44
5225 9442 5.221204 GGTACAGAGGGAGTATTTAGGAACG 60.221 48.000 0.00 0.00 0.00 3.95
5226 9443 5.221204 CGGTACAGAGGGAGTATTTAGGAAC 60.221 48.000 0.00 0.00 0.00 3.62
5227 9444 4.891756 CGGTACAGAGGGAGTATTTAGGAA 59.108 45.833 0.00 0.00 0.00 3.36
5228 9445 4.166725 TCGGTACAGAGGGAGTATTTAGGA 59.833 45.833 0.00 0.00 0.00 2.94
5229 9446 4.467769 TCGGTACAGAGGGAGTATTTAGG 58.532 47.826 0.00 0.00 0.00 2.69
5230 9447 6.461110 TTTCGGTACAGAGGGAGTATTTAG 57.539 41.667 0.00 0.00 0.00 1.85
5231 9448 8.537728 TTATTTCGGTACAGAGGGAGTATTTA 57.462 34.615 0.00 0.00 0.00 1.40
5232 9449 5.952347 ATTTCGGTACAGAGGGAGTATTT 57.048 39.130 0.00 0.00 0.00 1.40
5233 9450 7.613551 ATTATTTCGGTACAGAGGGAGTATT 57.386 36.000 0.00 0.00 0.00 1.89
5234 9451 7.070821 ACAATTATTTCGGTACAGAGGGAGTAT 59.929 37.037 0.00 0.00 0.00 2.12
5235 9452 6.381994 ACAATTATTTCGGTACAGAGGGAGTA 59.618 38.462 0.00 0.00 0.00 2.59
5236 9453 5.189145 ACAATTATTTCGGTACAGAGGGAGT 59.811 40.000 0.00 0.00 0.00 3.85
5237 9454 5.671493 ACAATTATTTCGGTACAGAGGGAG 58.329 41.667 0.00 0.00 0.00 4.30
5238 9455 5.667466 GACAATTATTTCGGTACAGAGGGA 58.333 41.667 0.00 0.00 0.00 4.20
5239 9456 4.506654 CGACAATTATTTCGGTACAGAGGG 59.493 45.833 0.00 0.00 0.00 4.30
5240 9457 4.025979 GCGACAATTATTTCGGTACAGAGG 60.026 45.833 0.00 0.00 35.73 3.69
5241 9458 4.804139 AGCGACAATTATTTCGGTACAGAG 59.196 41.667 10.59 0.00 43.71 3.35
5242 9459 4.565166 CAGCGACAATTATTTCGGTACAGA 59.435 41.667 11.45 0.00 43.70 3.41
5243 9460 4.260212 CCAGCGACAATTATTTCGGTACAG 60.260 45.833 11.45 0.00 43.70 2.74
5244 9461 3.619483 CCAGCGACAATTATTTCGGTACA 59.381 43.478 11.45 0.00 43.70 2.90
5245 9462 3.866910 TCCAGCGACAATTATTTCGGTAC 59.133 43.478 11.45 0.00 43.70 3.34
5246 9463 4.116961 CTCCAGCGACAATTATTTCGGTA 58.883 43.478 11.45 1.59 43.70 4.02
5247 9464 2.936498 CTCCAGCGACAATTATTTCGGT 59.064 45.455 7.84 7.84 46.29 4.69
5248 9465 2.936498 ACTCCAGCGACAATTATTTCGG 59.064 45.455 9.95 0.00 35.73 4.30
5249 9466 4.318121 GCTACTCCAGCGACAATTATTTCG 60.318 45.833 0.00 5.59 41.37 3.46
5250 9467 5.084385 GCTACTCCAGCGACAATTATTTC 57.916 43.478 0.00 0.00 41.37 2.17
5263 9480 0.244994 AGTTGTCGCAGCTACTCCAG 59.755 55.000 0.00 0.00 0.00 3.86
5264 9481 1.541379 TAGTTGTCGCAGCTACTCCA 58.459 50.000 0.00 0.00 0.00 3.86
5265 9482 2.873133 ATAGTTGTCGCAGCTACTCC 57.127 50.000 5.78 0.00 30.60 3.85
5266 9483 3.240861 CGAAATAGTTGTCGCAGCTACTC 59.759 47.826 5.78 5.59 30.60 2.59
5267 9484 3.179830 CGAAATAGTTGTCGCAGCTACT 58.820 45.455 5.78 0.00 30.60 2.57
5268 9485 2.281762 CCGAAATAGTTGTCGCAGCTAC 59.718 50.000 5.78 0.00 35.93 3.58
5269 9486 2.094390 ACCGAAATAGTTGTCGCAGCTA 60.094 45.455 6.04 6.04 35.93 3.32
5270 9487 1.337823 ACCGAAATAGTTGTCGCAGCT 60.338 47.619 0.00 2.34 35.93 4.24
5271 9488 1.076332 ACCGAAATAGTTGTCGCAGC 58.924 50.000 0.00 0.00 35.93 5.25
5272 9489 3.247442 TGTACCGAAATAGTTGTCGCAG 58.753 45.455 0.00 0.00 35.93 5.18
5273 9490 3.057386 TCTGTACCGAAATAGTTGTCGCA 60.057 43.478 0.00 0.00 35.93 5.10
5274 9491 3.504863 TCTGTACCGAAATAGTTGTCGC 58.495 45.455 0.00 0.00 35.93 5.19
5275 9492 4.103357 CCTCTGTACCGAAATAGTTGTCG 58.897 47.826 0.00 0.00 37.01 4.35
5276 9493 4.159135 TCCCTCTGTACCGAAATAGTTGTC 59.841 45.833 0.00 0.00 0.00 3.18
5277 9494 4.091549 TCCCTCTGTACCGAAATAGTTGT 58.908 43.478 0.00 0.00 0.00 3.32
5278 9495 4.159879 ACTCCCTCTGTACCGAAATAGTTG 59.840 45.833 0.00 0.00 0.00 3.16
5279 9496 4.351127 ACTCCCTCTGTACCGAAATAGTT 58.649 43.478 0.00 0.00 0.00 2.24
5280 9497 3.978610 ACTCCCTCTGTACCGAAATAGT 58.021 45.455 0.00 0.00 0.00 2.12
5281 9498 7.447853 ACTTATACTCCCTCTGTACCGAAATAG 59.552 40.741 0.00 0.00 0.00 1.73
5282 9499 7.293073 ACTTATACTCCCTCTGTACCGAAATA 58.707 38.462 0.00 0.00 0.00 1.40
5283 9500 6.134754 ACTTATACTCCCTCTGTACCGAAAT 58.865 40.000 0.00 0.00 0.00 2.17
5284 9501 5.513233 ACTTATACTCCCTCTGTACCGAAA 58.487 41.667 0.00 0.00 0.00 3.46
5285 9502 5.104193 AGACTTATACTCCCTCTGTACCGAA 60.104 44.000 0.00 0.00 0.00 4.30
5286 9503 4.411540 AGACTTATACTCCCTCTGTACCGA 59.588 45.833 0.00 0.00 0.00 4.69
5287 9504 4.716794 AGACTTATACTCCCTCTGTACCG 58.283 47.826 0.00 0.00 0.00 4.02
5288 9505 6.834969 AGAAAGACTTATACTCCCTCTGTACC 59.165 42.308 0.00 0.00 0.00 3.34
5289 9506 7.885009 AGAAAGACTTATACTCCCTCTGTAC 57.115 40.000 0.00 0.00 0.00 2.90
5290 9507 9.986157 TTTAGAAAGACTTATACTCCCTCTGTA 57.014 33.333 0.00 0.00 0.00 2.74
5291 9508 8.896722 TTTAGAAAGACTTATACTCCCTCTGT 57.103 34.615 0.00 0.00 0.00 3.41
5292 9509 9.191479 TCTTTAGAAAGACTTATACTCCCTCTG 57.809 37.037 0.46 0.00 39.95 3.35
5293 9510 9.945633 ATCTTTAGAAAGACTTATACTCCCTCT 57.054 33.333 6.85 0.00 46.80 3.69
5296 9513 9.767228 GGAATCTTTAGAAAGACTTATACTCCC 57.233 37.037 6.85 0.00 46.80 4.30
5320 9537 4.219944 GCTCCGTACATAGTCCATATTGGA 59.780 45.833 0.00 0.00 45.98 3.53
5321 9538 4.021456 TGCTCCGTACATAGTCCATATTGG 60.021 45.833 0.00 0.00 39.43 3.16
5322 9539 5.134202 TGCTCCGTACATAGTCCATATTG 57.866 43.478 0.00 0.00 0.00 1.90
5323 9540 5.801531 TTGCTCCGTACATAGTCCATATT 57.198 39.130 0.00 0.00 0.00 1.28
5324 9541 5.801531 TTTGCTCCGTACATAGTCCATAT 57.198 39.130 0.00 0.00 0.00 1.78
5325 9542 5.601583 TTTTGCTCCGTACATAGTCCATA 57.398 39.130 0.00 0.00 0.00 2.74
5326 9543 4.481368 TTTTGCTCCGTACATAGTCCAT 57.519 40.909 0.00 0.00 0.00 3.41
5327 9544 3.965379 TTTTGCTCCGTACATAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
5328 9545 4.439057 TCATTTTGCTCCGTACATAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
5329 9546 5.005779 CACTCATTTTGCTCCGTACATAGTC 59.994 44.000 0.00 0.00 0.00 2.59
5330 9547 4.870426 CACTCATTTTGCTCCGTACATAGT 59.130 41.667 0.00 0.00 0.00 2.12
5331 9548 5.109210 TCACTCATTTTGCTCCGTACATAG 58.891 41.667 0.00 0.00 0.00 2.23
5332 9549 5.079689 TCACTCATTTTGCTCCGTACATA 57.920 39.130 0.00 0.00 0.00 2.29
5333 9550 3.937814 TCACTCATTTTGCTCCGTACAT 58.062 40.909 0.00 0.00 0.00 2.29
5334 9551 3.394674 TCACTCATTTTGCTCCGTACA 57.605 42.857 0.00 0.00 0.00 2.90
5335 9552 4.631813 AGATTCACTCATTTTGCTCCGTAC 59.368 41.667 0.00 0.00 0.00 3.67
5336 9553 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
5337 9554 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
5338 9555 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
5339 9556 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
5340 9557 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
5351 9568 5.742926 GGCGTAGTTTAGAGTGTAGATTCAC 59.257 44.000 0.00 0.00 38.46 3.18
5352 9569 5.651139 AGGCGTAGTTTAGAGTGTAGATTCA 59.349 40.000 0.00 0.00 0.00 2.57
5353 9570 6.134040 AGGCGTAGTTTAGAGTGTAGATTC 57.866 41.667 0.00 0.00 0.00 2.52
5354 9571 6.262720 CCTAGGCGTAGTTTAGAGTGTAGATT 59.737 42.308 12.21 0.00 0.00 2.40
5355 9572 5.764192 CCTAGGCGTAGTTTAGAGTGTAGAT 59.236 44.000 12.21 0.00 0.00 1.98
5356 9573 5.121811 CCTAGGCGTAGTTTAGAGTGTAGA 58.878 45.833 12.21 0.00 0.00 2.59
5357 9574 4.880696 ACCTAGGCGTAGTTTAGAGTGTAG 59.119 45.833 9.30 0.00 0.00 2.74
5358 9575 4.848357 ACCTAGGCGTAGTTTAGAGTGTA 58.152 43.478 9.30 0.00 0.00 2.90
5359 9576 3.694926 ACCTAGGCGTAGTTTAGAGTGT 58.305 45.455 9.30 0.00 0.00 3.55
5360 9577 4.880696 AGTACCTAGGCGTAGTTTAGAGTG 59.119 45.833 9.30 0.00 0.00 3.51
5361 9578 5.109500 AGTACCTAGGCGTAGTTTAGAGT 57.891 43.478 9.30 4.69 0.00 3.24
5362 9579 4.514816 GGAGTACCTAGGCGTAGTTTAGAG 59.485 50.000 9.30 0.00 0.00 2.43
5363 9580 4.080356 TGGAGTACCTAGGCGTAGTTTAGA 60.080 45.833 9.30 0.00 37.04 2.10
5364 9581 4.202441 TGGAGTACCTAGGCGTAGTTTAG 58.798 47.826 9.30 0.00 37.04 1.85
5365 9582 4.235079 TGGAGTACCTAGGCGTAGTTTA 57.765 45.455 9.30 1.04 37.04 2.01
5366 9583 3.091633 TGGAGTACCTAGGCGTAGTTT 57.908 47.619 9.30 1.94 37.04 2.66
5367 9584 2.814805 TGGAGTACCTAGGCGTAGTT 57.185 50.000 9.30 0.58 37.04 2.24
5368 9585 4.654389 ATATGGAGTACCTAGGCGTAGT 57.346 45.455 9.30 0.00 37.04 2.73
5369 9586 5.008331 TCAATATGGAGTACCTAGGCGTAG 58.992 45.833 9.30 6.46 37.04 3.51
5370 9587 4.989277 TCAATATGGAGTACCTAGGCGTA 58.011 43.478 9.30 0.00 37.04 4.42
5371 9588 3.840991 TCAATATGGAGTACCTAGGCGT 58.159 45.455 9.30 0.00 37.04 5.68
5372 9589 4.866508 TTCAATATGGAGTACCTAGGCG 57.133 45.455 9.30 0.00 37.04 5.52
5373 9590 7.010339 AGATTTCAATATGGAGTACCTAGGC 57.990 40.000 9.30 0.00 37.04 3.93
5374 9591 8.429237 AGAGATTTCAATATGGAGTACCTAGG 57.571 38.462 7.41 7.41 37.04 3.02
5377 9594 9.661954 TTCTAGAGATTTCAATATGGAGTACCT 57.338 33.333 0.00 0.00 37.04 3.08
5400 9617 8.422566 CCTCCGTTCCTAAATATAAGTCTTTCT 58.577 37.037 0.00 0.00 0.00 2.52
5401 9618 7.656542 CCCTCCGTTCCTAAATATAAGTCTTTC 59.343 40.741 0.00 0.00 0.00 2.62
5402 9619 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
5403 9620 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
5404 9621 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
5405 9622 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
5406 9623 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
5407 9624 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
5408 9625 6.723052 CCTACTCCCTCCGTTCCTAAATATAA 59.277 42.308 0.00 0.00 0.00 0.98
5409 9626 6.045931 TCCTACTCCCTCCGTTCCTAAATATA 59.954 42.308 0.00 0.00 0.00 0.86
5410 9627 5.085219 CCTACTCCCTCCGTTCCTAAATAT 58.915 45.833 0.00 0.00 0.00 1.28
5411 9628 4.168675 TCCTACTCCCTCCGTTCCTAAATA 59.831 45.833 0.00 0.00 0.00 1.40
5412 9629 3.052338 TCCTACTCCCTCCGTTCCTAAAT 60.052 47.826 0.00 0.00 0.00 1.40
5413 9630 2.312741 TCCTACTCCCTCCGTTCCTAAA 59.687 50.000 0.00 0.00 0.00 1.85
5414 9631 1.925255 TCCTACTCCCTCCGTTCCTAA 59.075 52.381 0.00 0.00 0.00 2.69
5415 9632 1.493871 CTCCTACTCCCTCCGTTCCTA 59.506 57.143 0.00 0.00 0.00 2.94
5416 9633 0.259356 CTCCTACTCCCTCCGTTCCT 59.741 60.000 0.00 0.00 0.00 3.36
5417 9634 0.033306 ACTCCTACTCCCTCCGTTCC 60.033 60.000 0.00 0.00 0.00 3.62
5418 9635 1.849977 AACTCCTACTCCCTCCGTTC 58.150 55.000 0.00 0.00 0.00 3.95
5419 9636 1.900486 CAAACTCCTACTCCCTCCGTT 59.100 52.381 0.00 0.00 0.00 4.44
5420 9637 1.558233 CAAACTCCTACTCCCTCCGT 58.442 55.000 0.00 0.00 0.00 4.69
5421 9638 0.175989 GCAAACTCCTACTCCCTCCG 59.824 60.000 0.00 0.00 0.00 4.63
5422 9639 1.066071 GTGCAAACTCCTACTCCCTCC 60.066 57.143 0.00 0.00 0.00 4.30
5423 9640 1.066071 GGTGCAAACTCCTACTCCCTC 60.066 57.143 0.00 0.00 0.00 4.30
5424 9641 0.984995 GGTGCAAACTCCTACTCCCT 59.015 55.000 0.00 0.00 0.00 4.20
5425 9642 0.391263 CGGTGCAAACTCCTACTCCC 60.391 60.000 0.00 0.00 0.00 4.30
5426 9643 0.391263 CCGGTGCAAACTCCTACTCC 60.391 60.000 0.00 0.00 0.00 3.85
5427 9644 1.019805 GCCGGTGCAAACTCCTACTC 61.020 60.000 1.90 0.00 37.47 2.59
5428 9645 1.003718 GCCGGTGCAAACTCCTACT 60.004 57.895 1.90 0.00 37.47 2.57
5429 9646 2.388232 CGCCGGTGCAAACTCCTAC 61.388 63.158 0.00 0.00 37.32 3.18
5518 9735 8.376270 GGCAAAGTACCAGATTCCTATAGTATT 58.624 37.037 0.00 0.00 0.00 1.89
5521 9738 5.221461 CGGCAAAGTACCAGATTCCTATAGT 60.221 44.000 0.00 0.00 0.00 2.12
5522 9739 5.010719 TCGGCAAAGTACCAGATTCCTATAG 59.989 44.000 0.00 0.00 0.00 1.31
5523 9740 4.897076 TCGGCAAAGTACCAGATTCCTATA 59.103 41.667 0.00 0.00 0.00 1.31
5524 9741 3.709653 TCGGCAAAGTACCAGATTCCTAT 59.290 43.478 0.00 0.00 0.00 2.57
5525 9742 3.101437 TCGGCAAAGTACCAGATTCCTA 58.899 45.455 0.00 0.00 0.00 2.94
5526 9743 1.906574 TCGGCAAAGTACCAGATTCCT 59.093 47.619 0.00 0.00 0.00 3.36
5527 9744 2.396590 TCGGCAAAGTACCAGATTCC 57.603 50.000 0.00 0.00 0.00 3.01
5528 9745 3.531538 TCATCGGCAAAGTACCAGATTC 58.468 45.455 0.00 0.00 0.00 2.52
5529 9746 3.627395 TCATCGGCAAAGTACCAGATT 57.373 42.857 0.00 0.00 0.00 2.40
5530 9747 3.627395 TTCATCGGCAAAGTACCAGAT 57.373 42.857 0.00 0.00 0.00 2.90
5531 9748 3.071479 GTTTCATCGGCAAAGTACCAGA 58.929 45.455 0.00 0.00 0.00 3.86
5532 9749 3.074412 AGTTTCATCGGCAAAGTACCAG 58.926 45.455 0.00 0.00 0.00 4.00
5533 9750 3.071479 GAGTTTCATCGGCAAAGTACCA 58.929 45.455 0.00 0.00 0.00 3.25
5534 9751 3.071479 TGAGTTTCATCGGCAAAGTACC 58.929 45.455 0.00 0.00 0.00 3.34
5535 9752 4.742438 TTGAGTTTCATCGGCAAAGTAC 57.258 40.909 0.00 0.00 0.00 2.73
5536 9753 5.957842 ATTTGAGTTTCATCGGCAAAGTA 57.042 34.783 0.00 0.00 32.71 2.24
5537 9754 4.853924 ATTTGAGTTTCATCGGCAAAGT 57.146 36.364 0.00 0.00 32.71 2.66
5538 9755 6.254157 CCATTATTTGAGTTTCATCGGCAAAG 59.746 38.462 0.00 0.00 32.71 2.77
5539 9756 6.071672 TCCATTATTTGAGTTTCATCGGCAAA 60.072 34.615 0.00 0.00 33.59 3.68
5540 9757 5.417266 TCCATTATTTGAGTTTCATCGGCAA 59.583 36.000 0.00 0.00 0.00 4.52
5541 9758 4.946772 TCCATTATTTGAGTTTCATCGGCA 59.053 37.500 0.00 0.00 0.00 5.69
5542 9759 5.499139 TCCATTATTTGAGTTTCATCGGC 57.501 39.130 0.00 0.00 0.00 5.54
5543 9760 6.095440 ACCTTCCATTATTTGAGTTTCATCGG 59.905 38.462 0.00 0.00 0.00 4.18
5544 9761 7.088589 ACCTTCCATTATTTGAGTTTCATCG 57.911 36.000 0.00 0.00 0.00 3.84
5545 9762 8.522830 TCAACCTTCCATTATTTGAGTTTCATC 58.477 33.333 0.00 0.00 0.00 2.92
5609 9851 1.682087 GGACCTCCTGCGCCTATTTTT 60.682 52.381 4.18 0.00 0.00 1.94
5631 9873 5.127845 TGACCTTGTGCACATTTAAAAAGGA 59.872 36.000 29.37 12.03 36.91 3.36
5633 9875 6.564499 GCATGACCTTGTGCACATTTAAAAAG 60.564 38.462 22.39 12.84 40.94 2.27
5638 9880 3.156293 AGCATGACCTTGTGCACATTTA 58.844 40.909 22.39 4.74 43.63 1.40
5699 9942 0.979187 ATCCAGCAGGGCCAATTTGG 60.979 55.000 11.27 11.27 41.55 3.28
5711 9954 7.151308 ACATGATTTTAAAAACGAATCCAGCA 58.849 30.769 4.44 0.00 0.00 4.41
5798 10042 5.185056 TGCTAATAACTACAGCTCACAGTCA 59.815 40.000 0.00 0.00 36.26 3.41
5799 10043 5.651530 TGCTAATAACTACAGCTCACAGTC 58.348 41.667 0.00 0.00 36.26 3.51
5804 10048 6.037786 ACTGTTGCTAATAACTACAGCTCA 57.962 37.500 5.44 0.00 42.31 4.26
5830 10080 4.811908 TGTTGCACTGTCGCTAATAACTA 58.188 39.130 0.00 0.00 0.00 2.24
5831 10081 3.659786 TGTTGCACTGTCGCTAATAACT 58.340 40.909 0.00 0.00 0.00 2.24
5832 10082 4.398549 TTGTTGCACTGTCGCTAATAAC 57.601 40.909 0.00 0.00 0.00 1.89
5833 10083 5.621197 ATTTGTTGCACTGTCGCTAATAA 57.379 34.783 0.00 1.01 0.00 1.40
5834 10084 5.180304 TGAATTTGTTGCACTGTCGCTAATA 59.820 36.000 0.00 0.00 0.00 0.98
5835 10085 4.023279 TGAATTTGTTGCACTGTCGCTAAT 60.023 37.500 0.00 0.00 0.00 1.73
5870 10124 7.850982 GCATCCTCATAATAACAAGTTACAACG 59.149 37.037 0.00 0.00 0.00 4.10
5879 10133 6.097981 TGGCATTTGCATCCTCATAATAACAA 59.902 34.615 4.74 0.00 44.36 2.83
5880 10134 5.597594 TGGCATTTGCATCCTCATAATAACA 59.402 36.000 4.74 0.00 44.36 2.41
5881 10135 6.088016 TGGCATTTGCATCCTCATAATAAC 57.912 37.500 4.74 0.00 44.36 1.89
5902 10159 3.573538 TGGTTCTTGGTTTCATCACATGG 59.426 43.478 0.00 0.00 0.00 3.66
5904 10161 5.139727 TCTTGGTTCTTGGTTTCATCACAT 58.860 37.500 0.00 0.00 0.00 3.21
5942 10199 4.202010 CCACGACATTTTCCCCATAATGAC 60.202 45.833 0.00 0.00 36.03 3.06
5952 10209 5.123227 TGATAGATTCCCACGACATTTTCC 58.877 41.667 0.00 0.00 0.00 3.13
5953 10210 5.277538 GCTGATAGATTCCCACGACATTTTC 60.278 44.000 0.00 0.00 0.00 2.29
5960 10218 4.129380 CAAATGCTGATAGATTCCCACGA 58.871 43.478 0.00 0.00 0.00 4.35
5961 10219 3.251729 CCAAATGCTGATAGATTCCCACG 59.748 47.826 0.00 0.00 0.00 4.94
5963 10221 4.794311 TCCAAATGCTGATAGATTCCCA 57.206 40.909 0.00 0.00 0.00 4.37
5989 10247 5.983475 TCCAAATGCAATTTAAACTTTGCG 58.017 33.333 17.36 6.90 46.64 4.85
6039 10297 5.009631 AGCAAGTTATTGTATTGTGAGCCA 58.990 37.500 0.00 0.00 38.76 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.