Multiple sequence alignment - TraesCS3A01G351900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G351900 chr3A 100.000 2288 0 0 1 2288 600090317 600088030 0.000000e+00 4226.0
1 TraesCS3A01G351900 chr3A 79.630 216 25 10 1980 2193 666013048 666012850 1.100000e-28 137.0
2 TraesCS3A01G351900 chr1D 94.451 1712 82 3 1 1699 481925574 481927285 0.000000e+00 2623.0
3 TraesCS3A01G351900 chr1D 92.640 1712 92 6 1 1699 467434237 467435927 0.000000e+00 2433.0
4 TraesCS3A01G351900 chr3D 93.879 1699 103 1 1 1699 124068684 124066987 0.000000e+00 2560.0
5 TraesCS3A01G351900 chr3D 84.286 420 52 5 1865 2283 294606633 294606227 4.580000e-107 398.0
6 TraesCS3A01G351900 chr3D 77.674 430 42 17 1862 2283 339444722 339445105 1.780000e-51 213.0
7 TraesCS3A01G351900 chr5B 92.575 1724 112 6 1 1709 503240483 503238761 0.000000e+00 2460.0
8 TraesCS3A01G351900 chr5B 91.383 1706 126 17 2 1699 54116519 54114827 0.000000e+00 2316.0
9 TraesCS3A01G351900 chr5B 75.556 360 47 22 1865 2199 478936587 478936244 3.060000e-29 139.0
10 TraesCS3A01G351900 chr5A 91.750 1600 127 4 108 1705 651643130 651641534 0.000000e+00 2218.0
11 TraesCS3A01G351900 chr5A 89.559 1724 148 15 1 1698 312260229 312258512 0.000000e+00 2158.0
12 TraesCS3A01G351900 chr5A 94.828 58 2 1 2208 2264 658794630 658794687 3.130000e-14 89.8
13 TraesCS3A01G351900 chr2B 89.982 1707 162 9 3 1708 766109452 766111150 0.000000e+00 2196.0
14 TraesCS3A01G351900 chr2B 82.775 418 62 7 1865 2280 493718234 493718643 4.650000e-97 364.0
15 TraesCS3A01G351900 chr2B 77.895 285 39 13 1980 2257 427569742 427570009 3.040000e-34 156.0
16 TraesCS3A01G351900 chr3B 90.147 1705 136 16 3 1699 496764914 496766594 0.000000e+00 2189.0
17 TraesCS3A01G351900 chr3B 82.569 436 53 14 1862 2282 530606917 530607344 1.670000e-96 363.0
18 TraesCS3A01G351900 chr3B 85.859 99 9 4 2186 2282 613551077 613550982 1.450000e-17 100.0
19 TraesCS3A01G351900 chr3B 80.870 115 17 5 1847 1956 244684825 244684711 4.050000e-13 86.1
20 TraesCS3A01G351900 chr6B 90.250 1641 144 11 1 1629 655067831 655066195 0.000000e+00 2130.0
21 TraesCS3A01G351900 chr6B 80.594 438 64 9 1861 2283 320729184 320728753 3.670000e-83 318.0
22 TraesCS3A01G351900 chr6B 78.000 250 45 10 1863 2108 413290286 413290043 5.090000e-32 148.0
23 TraesCS3A01G351900 chr6B 82.692 104 14 3 1863 1964 184715542 184715643 3.130000e-14 89.8
24 TraesCS3A01G351900 chrUn 89.934 755 55 9 949 1702 386164732 386165466 0.000000e+00 953.0
25 TraesCS3A01G351900 chr4D 92.496 573 28 4 1145 1706 460660425 460659857 0.000000e+00 806.0
26 TraesCS3A01G351900 chr4D 82.680 306 41 7 1980 2283 322032365 322032660 6.270000e-66 261.0
27 TraesCS3A01G351900 chr4D 84.615 91 14 0 1865 1955 11877761 11877671 8.700000e-15 91.6
28 TraesCS3A01G351900 chr4D 82.105 95 13 4 1863 1955 309498831 309498739 6.780000e-11 78.7
29 TraesCS3A01G351900 chr4B 82.974 417 45 17 1881 2283 338448792 338449196 1.010000e-93 353.0
30 TraesCS3A01G351900 chr4B 77.493 351 50 11 1862 2199 645293268 645293602 1.400000e-42 183.0
31 TraesCS3A01G351900 chr4B 77.852 298 43 11 1991 2283 176945135 176944856 1.820000e-36 163.0
32 TraesCS3A01G351900 chr4B 86.667 75 6 3 2119 2193 467269330 467269260 1.880000e-11 80.5
33 TraesCS3A01G351900 chr7D 91.667 168 14 0 1703 1870 620719958 620719791 1.370000e-57 233.0
34 TraesCS3A01G351900 chr7D 76.957 447 52 20 1863 2283 70816577 70816998 8.280000e-50 207.0
35 TraesCS3A01G351900 chr7D 76.837 449 51 27 1870 2283 472525892 472526322 1.070000e-48 204.0
36 TraesCS3A01G351900 chr7A 92.453 159 12 0 1703 1861 696986258 696986100 6.360000e-56 228.0
37 TraesCS3A01G351900 chr7A 90.741 162 14 1 1700 1861 593072653 593072813 4.950000e-52 215.0
38 TraesCS3A01G351900 chr2A 91.358 162 14 0 1700 1861 409644110 409644271 2.960000e-54 222.0
39 TraesCS3A01G351900 chr2A 90.683 161 15 0 1700 1860 769193251 769193411 4.950000e-52 215.0
40 TraesCS3A01G351900 chr2A 75.516 339 45 11 1860 2173 536321499 536321174 5.130000e-27 132.0
41 TraesCS3A01G351900 chr6D 90.798 163 14 1 1700 1862 454889356 454889517 1.380000e-52 217.0
42 TraesCS3A01G351900 chr6D 90.184 163 15 1 1700 1862 454922911 454923072 6.400000e-51 211.0
43 TraesCS3A01G351900 chr6A 90.741 162 15 0 1700 1861 46548978 46549139 1.380000e-52 217.0
44 TraesCS3A01G351900 chr5D 90.741 162 14 1 1700 1861 543670840 543671000 4.950000e-52 215.0
45 TraesCS3A01G351900 chr2D 77.222 360 41 17 1865 2199 615992121 615991778 3.020000e-39 172.0
46 TraesCS3A01G351900 chr1A 85.981 107 5 9 2178 2282 248621015 248620917 3.110000e-19 106.0
47 TraesCS3A01G351900 chr7B 83.158 95 10 6 1865 1956 71247857 71247766 5.240000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G351900 chr3A 600088030 600090317 2287 True 4226 4226 100.000 1 2288 1 chr3A.!!$R1 2287
1 TraesCS3A01G351900 chr1D 481925574 481927285 1711 False 2623 2623 94.451 1 1699 1 chr1D.!!$F2 1698
2 TraesCS3A01G351900 chr1D 467434237 467435927 1690 False 2433 2433 92.640 1 1699 1 chr1D.!!$F1 1698
3 TraesCS3A01G351900 chr3D 124066987 124068684 1697 True 2560 2560 93.879 1 1699 1 chr3D.!!$R1 1698
4 TraesCS3A01G351900 chr5B 503238761 503240483 1722 True 2460 2460 92.575 1 1709 1 chr5B.!!$R3 1708
5 TraesCS3A01G351900 chr5B 54114827 54116519 1692 True 2316 2316 91.383 2 1699 1 chr5B.!!$R1 1697
6 TraesCS3A01G351900 chr5A 651641534 651643130 1596 True 2218 2218 91.750 108 1705 1 chr5A.!!$R2 1597
7 TraesCS3A01G351900 chr5A 312258512 312260229 1717 True 2158 2158 89.559 1 1698 1 chr5A.!!$R1 1697
8 TraesCS3A01G351900 chr2B 766109452 766111150 1698 False 2196 2196 89.982 3 1708 1 chr2B.!!$F3 1705
9 TraesCS3A01G351900 chr3B 496764914 496766594 1680 False 2189 2189 90.147 3 1699 1 chr3B.!!$F1 1696
10 TraesCS3A01G351900 chr6B 655066195 655067831 1636 True 2130 2130 90.250 1 1629 1 chr6B.!!$R3 1628
11 TraesCS3A01G351900 chrUn 386164732 386165466 734 False 953 953 89.934 949 1702 1 chrUn.!!$F1 753
12 TraesCS3A01G351900 chr4D 460659857 460660425 568 True 806 806 92.496 1145 1706 1 chr4D.!!$R3 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
517 526 0.334676 CCTCCAGCCAATACCCCAAA 59.665 55.0 0.0 0.0 0.0 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1801 1938 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.0 0.0 0.0 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.440880 CCTTCATCTTCTTCTTCATCGCT 58.559 43.478 0.00 0.00 0.00 4.93
178 187 3.928779 GCTCCCCGCCGATGATCA 61.929 66.667 0.00 0.00 0.00 2.92
182 191 3.911698 CCCGCCGATGATCACCGA 61.912 66.667 12.18 0.00 0.00 4.69
215 224 1.982395 TCTCCCAGTACACTGCGGG 60.982 63.158 13.56 7.47 42.47 6.13
354 363 0.904865 TCGCTGGGTCAGGAATCAGT 60.905 55.000 0.00 0.00 31.21 3.41
433 442 4.301505 GCATGGAGCCGAAGTTCA 57.698 55.556 3.32 0.00 37.23 3.18
463 472 2.367241 TCCATGGTGTTCTCGAACTTGA 59.633 45.455 12.58 0.00 41.67 3.02
517 526 0.334676 CCTCCAGCCAATACCCCAAA 59.665 55.000 0.00 0.00 0.00 3.28
531 540 1.913262 CCAAAGGAAGGGGTTGGCC 60.913 63.158 0.00 0.00 35.72 5.36
570 579 0.624206 TCATGGCAATGGGGAGGAGA 60.624 55.000 0.00 0.00 34.30 3.71
642 655 5.102783 AGGGTGAGTAAATATAGGAGGGTGA 60.103 44.000 0.00 0.00 0.00 4.02
653 672 0.689412 GGAGGGTGAAGAGGAGGAGG 60.689 65.000 0.00 0.00 0.00 4.30
716 757 1.949525 GCCATGAACTCTGTGTTGTGT 59.050 47.619 0.00 0.00 39.30 3.72
732 773 5.238432 GTGTTGTGTGTGACTCCATGAATTA 59.762 40.000 0.00 0.00 0.00 1.40
820 861 2.772924 CCCCTTCACCCAATGCCT 59.227 61.111 0.00 0.00 0.00 4.75
837 878 1.301244 CTGACGAGGTTGTGCTGCT 60.301 57.895 0.00 0.00 0.00 4.24
856 897 3.036429 GCCCACTGCCGAGGAAGAT 62.036 63.158 3.68 0.00 0.00 2.40
926 974 3.109547 CAAGCGCCGCAACTACGA 61.110 61.111 13.36 0.00 34.06 3.43
1093 1141 0.679505 CTGGAAGGTGACGGTGAAGA 59.320 55.000 0.00 0.00 0.00 2.87
1175 1223 2.700371 TCAAGATCGGCTACATGGTGAT 59.300 45.455 0.00 0.00 0.00 3.06
1229 1277 2.612212 TCATCATCTTCGACGACGATGA 59.388 45.455 34.85 34.85 46.16 2.92
1309 1357 2.895424 CGGGCCACCTCTTTCCAGT 61.895 63.158 4.39 0.00 33.28 4.00
1565 1670 0.179048 CAGACAGTGTGGTTCTGCCA 60.179 55.000 0.00 0.00 46.95 4.92
1654 1791 0.606673 GTCAGGTTGGGTGGAGAAGC 60.607 60.000 0.00 0.00 0.00 3.86
1708 1845 2.618045 CCAAACACGCCCCTAGAGATTT 60.618 50.000 0.00 0.00 0.00 2.17
1709 1846 3.081804 CAAACACGCCCCTAGAGATTTT 58.918 45.455 0.00 0.00 0.00 1.82
1710 1847 4.258543 CAAACACGCCCCTAGAGATTTTA 58.741 43.478 0.00 0.00 0.00 1.52
1711 1848 3.538634 ACACGCCCCTAGAGATTTTAC 57.461 47.619 0.00 0.00 0.00 2.01
1712 1849 2.159142 ACACGCCCCTAGAGATTTTACG 60.159 50.000 0.00 0.00 0.00 3.18
1713 1850 2.100252 CACGCCCCTAGAGATTTTACGA 59.900 50.000 0.00 0.00 0.00 3.43
1714 1851 2.762327 ACGCCCCTAGAGATTTTACGAA 59.238 45.455 0.00 0.00 0.00 3.85
1715 1852 3.181478 ACGCCCCTAGAGATTTTACGAAG 60.181 47.826 0.00 0.00 0.00 3.79
1717 1854 4.370049 GCCCCTAGAGATTTTACGAAGTC 58.630 47.826 0.00 0.00 43.93 3.01
1718 1855 4.142004 GCCCCTAGAGATTTTACGAAGTCA 60.142 45.833 0.00 0.00 43.93 3.41
1719 1856 5.453480 GCCCCTAGAGATTTTACGAAGTCAT 60.453 44.000 0.00 0.00 43.93 3.06
1720 1857 6.217294 CCCCTAGAGATTTTACGAAGTCATC 58.783 44.000 0.00 0.00 43.93 2.92
1721 1858 6.183360 CCCCTAGAGATTTTACGAAGTCATCA 60.183 42.308 0.00 0.00 43.93 3.07
1722 1859 7.437748 CCCTAGAGATTTTACGAAGTCATCAT 58.562 38.462 0.00 0.00 43.93 2.45
1723 1860 8.577296 CCCTAGAGATTTTACGAAGTCATCATA 58.423 37.037 0.00 0.00 43.93 2.15
1724 1861 9.619316 CCTAGAGATTTTACGAAGTCATCATAG 57.381 37.037 0.00 0.00 43.93 2.23
1727 1864 7.858382 AGAGATTTTACGAAGTCATCATAGACG 59.142 37.037 0.00 0.00 43.93 4.18
1728 1865 5.944049 TTTTACGAAGTCATCATAGACGC 57.056 39.130 0.00 0.00 43.93 5.19
1729 1866 4.625972 TTACGAAGTCATCATAGACGCA 57.374 40.909 0.00 0.00 43.93 5.24
1730 1867 3.717400 ACGAAGTCATCATAGACGCAT 57.283 42.857 0.00 0.00 43.24 4.73
1731 1868 3.633235 ACGAAGTCATCATAGACGCATC 58.367 45.455 0.00 0.00 43.24 3.91
1732 1869 2.654056 CGAAGTCATCATAGACGCATCG 59.346 50.000 0.00 0.00 43.24 3.84
1733 1870 3.633235 GAAGTCATCATAGACGCATCGT 58.367 45.455 0.00 0.00 45.10 3.73
1734 1871 4.610680 CGAAGTCATCATAGACGCATCGTA 60.611 45.833 0.00 0.00 41.37 3.43
1735 1872 4.411993 AGTCATCATAGACGCATCGTAG 57.588 45.455 0.00 0.00 41.37 3.51
1736 1873 3.815962 AGTCATCATAGACGCATCGTAGT 59.184 43.478 0.00 0.00 41.37 2.73
1737 1874 4.083749 AGTCATCATAGACGCATCGTAGTC 60.084 45.833 0.00 0.00 41.37 2.59
1738 1875 2.943843 TCATAGACGCATCGTAGTCG 57.056 50.000 0.00 0.00 41.37 4.18
1748 1885 2.858622 TCGTAGTCGATGGGAACGT 58.141 52.632 0.00 0.00 41.35 3.99
1749 1886 0.729116 TCGTAGTCGATGGGAACGTC 59.271 55.000 0.00 0.00 41.35 4.34
1750 1887 0.731417 CGTAGTCGATGGGAACGTCT 59.269 55.000 0.00 0.00 44.51 4.18
1751 1888 1.267932 CGTAGTCGATGGGAACGTCTC 60.268 57.143 0.00 0.00 44.51 3.36
1752 1889 1.065251 GTAGTCGATGGGAACGTCTCC 59.935 57.143 7.90 7.90 44.51 3.71
1753 1890 0.323542 AGTCGATGGGAACGTCTCCT 60.324 55.000 13.94 0.00 44.68 3.69
1754 1891 0.100861 GTCGATGGGAACGTCTCCTC 59.899 60.000 13.94 6.42 44.68 3.71
1755 1892 1.035932 TCGATGGGAACGTCTCCTCC 61.036 60.000 13.94 6.16 44.68 4.30
1759 1896 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
1760 1897 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
1761 1898 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
1762 1899 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
1763 1900 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
1764 1901 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
1765 1902 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
1766 1903 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
1767 1904 0.832135 TCTCCTCCCACTGAAAGCGT 60.832 55.000 0.00 0.00 37.60 5.07
1768 1905 0.671781 CTCCTCCCACTGAAAGCGTG 60.672 60.000 0.00 0.00 37.60 5.34
1769 1906 1.071471 CCTCCCACTGAAAGCGTGT 59.929 57.895 0.00 0.00 37.60 4.49
1770 1907 0.951040 CCTCCCACTGAAAGCGTGTC 60.951 60.000 0.00 0.00 37.60 3.67
1771 1908 1.284982 CTCCCACTGAAAGCGTGTCG 61.285 60.000 0.00 0.00 37.60 4.35
1782 1919 3.870606 CGTGTCGCCGAAAATCCT 58.129 55.556 0.00 0.00 0.00 3.24
1783 1920 1.419922 CGTGTCGCCGAAAATCCTG 59.580 57.895 0.00 0.00 0.00 3.86
1784 1921 1.011968 CGTGTCGCCGAAAATCCTGA 61.012 55.000 0.00 0.00 0.00 3.86
1785 1922 1.153353 GTGTCGCCGAAAATCCTGAA 58.847 50.000 0.00 0.00 0.00 3.02
1786 1923 1.533731 GTGTCGCCGAAAATCCTGAAA 59.466 47.619 0.00 0.00 0.00 2.69
1787 1924 2.161609 GTGTCGCCGAAAATCCTGAAAT 59.838 45.455 0.00 0.00 0.00 2.17
1788 1925 3.372822 GTGTCGCCGAAAATCCTGAAATA 59.627 43.478 0.00 0.00 0.00 1.40
1789 1926 4.004314 TGTCGCCGAAAATCCTGAAATAA 58.996 39.130 0.00 0.00 0.00 1.40
1790 1927 4.456222 TGTCGCCGAAAATCCTGAAATAAA 59.544 37.500 0.00 0.00 0.00 1.40
1791 1928 5.124776 TGTCGCCGAAAATCCTGAAATAAAT 59.875 36.000 0.00 0.00 0.00 1.40
1792 1929 5.681543 GTCGCCGAAAATCCTGAAATAAATC 59.318 40.000 0.00 0.00 0.00 2.17
1793 1930 4.976116 CGCCGAAAATCCTGAAATAAATCC 59.024 41.667 0.00 0.00 0.00 3.01
1794 1931 5.449862 CGCCGAAAATCCTGAAATAAATCCA 60.450 40.000 0.00 0.00 0.00 3.41
1795 1932 5.979517 GCCGAAAATCCTGAAATAAATCCAG 59.020 40.000 0.00 0.00 0.00 3.86
1796 1933 6.507023 CCGAAAATCCTGAAATAAATCCAGG 58.493 40.000 0.00 0.00 46.64 4.45
1806 1943 7.815840 TGAAATAAATCCAGGATAAATGCGA 57.184 32.000 1.02 0.00 0.00 5.10
1807 1944 7.874940 TGAAATAAATCCAGGATAAATGCGAG 58.125 34.615 1.02 0.00 0.00 5.03
1808 1945 5.886960 ATAAATCCAGGATAAATGCGAGC 57.113 39.130 1.02 0.00 0.00 5.03
1809 1946 2.936919 ATCCAGGATAAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
1810 1947 1.953559 TCCAGGATAAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
1811 1948 0.947244 CCAGGATAAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
1812 1949 1.667236 CAGGATAAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
1813 1950 1.600957 CAGGATAAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
1814 1951 0.947244 GGATAAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
1815 1952 1.475034 GGATAAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
1816 1953 2.498167 GATAAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
1817 1954 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
1818 1955 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
1819 1956 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
1820 1957 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
1821 1958 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
1822 1959 0.449388 GCGAGCACCAGGATTTGAAG 59.551 55.000 0.00 0.00 0.00 3.02
1823 1960 0.449388 CGAGCACCAGGATTTGAAGC 59.551 55.000 0.00 0.00 0.00 3.86
1824 1961 0.813821 GAGCACCAGGATTTGAAGCC 59.186 55.000 0.00 0.00 33.78 4.35
1831 1968 2.449137 AGGATTTGAAGCCTGATGGG 57.551 50.000 0.00 0.00 44.54 4.00
1832 1969 1.642762 AGGATTTGAAGCCTGATGGGT 59.357 47.619 0.00 0.00 44.54 4.51
1838 1975 3.936408 AGCCTGATGGGTTGGGAA 58.064 55.556 0.00 0.00 42.12 3.97
1839 1976 2.413406 AGCCTGATGGGTTGGGAAT 58.587 52.632 0.00 0.00 42.12 3.01
1840 1977 1.607225 AGCCTGATGGGTTGGGAATA 58.393 50.000 0.00 0.00 42.12 1.75
1841 1978 1.215423 AGCCTGATGGGTTGGGAATAC 59.785 52.381 0.00 0.00 42.12 1.89
1842 1979 1.754201 GCCTGATGGGTTGGGAATACC 60.754 57.143 0.00 0.00 37.28 2.73
1843 1980 4.357856 GCCTGATGGGTTGGGAATACCA 62.358 54.545 0.00 0.00 41.86 3.25
1853 1990 2.845659 TGGGAATACCACTGTCCATCT 58.154 47.619 0.00 0.00 46.80 2.90
1854 1991 4.002256 TGGGAATACCACTGTCCATCTA 57.998 45.455 0.00 0.00 46.80 1.98
1855 1992 4.367166 TGGGAATACCACTGTCCATCTAA 58.633 43.478 0.00 0.00 46.80 2.10
1856 1993 4.975147 TGGGAATACCACTGTCCATCTAAT 59.025 41.667 0.00 0.00 46.80 1.73
1857 1994 5.071788 TGGGAATACCACTGTCCATCTAATC 59.928 44.000 0.00 0.00 46.80 1.75
1858 1995 5.071788 GGGAATACCACTGTCCATCTAATCA 59.928 44.000 0.00 0.00 39.85 2.57
1859 1996 6.240002 GGGAATACCACTGTCCATCTAATCAT 60.240 42.308 0.00 0.00 39.85 2.45
1860 1997 6.876257 GGAATACCACTGTCCATCTAATCATC 59.124 42.308 0.00 0.00 35.97 2.92
1861 1998 4.696479 ACCACTGTCCATCTAATCATCC 57.304 45.455 0.00 0.00 0.00 3.51
1862 1999 4.302067 ACCACTGTCCATCTAATCATCCT 58.698 43.478 0.00 0.00 0.00 3.24
1863 2000 5.467738 ACCACTGTCCATCTAATCATCCTA 58.532 41.667 0.00 0.00 0.00 2.94
1864 2001 5.905331 ACCACTGTCCATCTAATCATCCTAA 59.095 40.000 0.00 0.00 0.00 2.69
1865 2002 6.042552 ACCACTGTCCATCTAATCATCCTAAG 59.957 42.308 0.00 0.00 0.00 2.18
1866 2003 6.268617 CCACTGTCCATCTAATCATCCTAAGA 59.731 42.308 0.00 0.00 0.00 2.10
1867 2004 7.202038 CCACTGTCCATCTAATCATCCTAAGAA 60.202 40.741 0.00 0.00 0.00 2.52
1868 2005 7.655328 CACTGTCCATCTAATCATCCTAAGAAC 59.345 40.741 0.00 0.00 0.00 3.01
1869 2006 7.345653 ACTGTCCATCTAATCATCCTAAGAACA 59.654 37.037 0.00 0.00 0.00 3.18
1870 2007 8.089625 TGTCCATCTAATCATCCTAAGAACAA 57.910 34.615 0.00 0.00 0.00 2.83
1871 2008 7.987458 TGTCCATCTAATCATCCTAAGAACAAC 59.013 37.037 0.00 0.00 0.00 3.32
1872 2009 8.207545 GTCCATCTAATCATCCTAAGAACAACT 58.792 37.037 0.00 0.00 0.00 3.16
1873 2010 8.424918 TCCATCTAATCATCCTAAGAACAACTC 58.575 37.037 0.00 0.00 0.00 3.01
1874 2011 7.659390 CCATCTAATCATCCTAAGAACAACTCC 59.341 40.741 0.00 0.00 0.00 3.85
1875 2012 7.733773 TCTAATCATCCTAAGAACAACTCCA 57.266 36.000 0.00 0.00 0.00 3.86
1876 2013 8.146053 TCTAATCATCCTAAGAACAACTCCAA 57.854 34.615 0.00 0.00 0.00 3.53
1877 2014 8.041323 TCTAATCATCCTAAGAACAACTCCAAC 58.959 37.037 0.00 0.00 0.00 3.77
1878 2015 4.566004 TCATCCTAAGAACAACTCCAACG 58.434 43.478 0.00 0.00 0.00 4.10
1879 2016 3.396260 TCCTAAGAACAACTCCAACGG 57.604 47.619 0.00 0.00 0.00 4.44
1880 2017 2.038033 TCCTAAGAACAACTCCAACGGG 59.962 50.000 0.00 0.00 0.00 5.28
1881 2018 2.423577 CTAAGAACAACTCCAACGGGG 58.576 52.381 0.00 0.00 38.37 5.73
1882 2019 0.822121 AAGAACAACTCCAACGGGGC 60.822 55.000 0.00 0.00 36.21 5.80
1883 2020 2.593436 AACAACTCCAACGGGGCG 60.593 61.111 0.00 0.00 36.21 6.13
1884 2021 2.999739 GAACAACTCCAACGGGGCGA 63.000 60.000 0.00 0.00 36.21 5.54
1885 2022 3.047877 CAACTCCAACGGGGCGAC 61.048 66.667 0.00 0.00 36.21 5.19
1897 2034 4.655921 GGCGACCCATTTCATCCA 57.344 55.556 0.00 0.00 0.00 3.41
1898 2035 2.106844 GGCGACCCATTTCATCCAC 58.893 57.895 0.00 0.00 0.00 4.02
1899 2036 0.394352 GGCGACCCATTTCATCCACT 60.394 55.000 0.00 0.00 0.00 4.00
1900 2037 1.463674 GCGACCCATTTCATCCACTT 58.536 50.000 0.00 0.00 0.00 3.16
1901 2038 1.133025 GCGACCCATTTCATCCACTTG 59.867 52.381 0.00 0.00 0.00 3.16
1902 2039 1.133025 CGACCCATTTCATCCACTTGC 59.867 52.381 0.00 0.00 0.00 4.01
1903 2040 1.133025 GACCCATTTCATCCACTTGCG 59.867 52.381 0.00 0.00 0.00 4.85
1904 2041 1.176527 CCCATTTCATCCACTTGCGT 58.823 50.000 0.00 0.00 0.00 5.24
1905 2042 1.133025 CCCATTTCATCCACTTGCGTC 59.867 52.381 0.00 0.00 0.00 5.19
1906 2043 2.086869 CCATTTCATCCACTTGCGTCT 58.913 47.619 0.00 0.00 0.00 4.18
1907 2044 2.159476 CCATTTCATCCACTTGCGTCTG 60.159 50.000 0.00 0.00 0.00 3.51
1908 2045 2.254546 TTTCATCCACTTGCGTCTGT 57.745 45.000 0.00 0.00 0.00 3.41
1909 2046 2.254546 TTCATCCACTTGCGTCTGTT 57.745 45.000 0.00 0.00 0.00 3.16
1910 2047 2.254546 TCATCCACTTGCGTCTGTTT 57.745 45.000 0.00 0.00 0.00 2.83
1911 2048 1.872952 TCATCCACTTGCGTCTGTTTG 59.127 47.619 0.00 0.00 0.00 2.93
1912 2049 1.069022 CATCCACTTGCGTCTGTTTGG 60.069 52.381 0.00 0.00 0.00 3.28
1913 2050 0.817634 TCCACTTGCGTCTGTTTGGG 60.818 55.000 0.00 0.00 0.00 4.12
1914 2051 1.101049 CCACTTGCGTCTGTTTGGGT 61.101 55.000 0.00 0.00 0.00 4.51
1915 2052 0.307760 CACTTGCGTCTGTTTGGGTC 59.692 55.000 0.00 0.00 0.00 4.46
1916 2053 0.107410 ACTTGCGTCTGTTTGGGTCA 60.107 50.000 0.00 0.00 0.00 4.02
1917 2054 0.588252 CTTGCGTCTGTTTGGGTCAG 59.412 55.000 0.00 0.00 0.00 3.51
1918 2055 1.444119 TTGCGTCTGTTTGGGTCAGC 61.444 55.000 0.00 0.00 33.48 4.26
1919 2056 1.891919 GCGTCTGTTTGGGTCAGCA 60.892 57.895 0.00 0.00 33.48 4.41
1920 2057 1.941812 CGTCTGTTTGGGTCAGCAC 59.058 57.895 0.00 0.00 33.48 4.40
1921 2058 1.831389 CGTCTGTTTGGGTCAGCACG 61.831 60.000 0.00 0.00 33.86 5.34
1922 2059 1.227823 TCTGTTTGGGTCAGCACGG 60.228 57.895 0.00 0.00 33.48 4.94
1923 2060 1.227823 CTGTTTGGGTCAGCACGGA 60.228 57.895 0.00 0.00 0.00 4.69
1924 2061 1.507141 CTGTTTGGGTCAGCACGGAC 61.507 60.000 0.00 0.00 37.06 4.79
1925 2062 1.525077 GTTTGGGTCAGCACGGACA 60.525 57.895 3.41 0.00 39.59 4.02
1926 2063 1.098712 GTTTGGGTCAGCACGGACAA 61.099 55.000 3.41 0.00 39.59 3.18
1927 2064 0.394488 TTTGGGTCAGCACGGACAAA 60.394 50.000 3.41 0.00 39.59 2.83
1928 2065 0.394488 TTGGGTCAGCACGGACAAAA 60.394 50.000 3.41 0.00 39.59 2.44
1929 2066 0.817634 TGGGTCAGCACGGACAAAAG 60.818 55.000 3.41 0.00 39.59 2.27
1930 2067 0.818040 GGGTCAGCACGGACAAAAGT 60.818 55.000 3.41 0.00 39.59 2.66
1931 2068 1.541670 GGGTCAGCACGGACAAAAGTA 60.542 52.381 3.41 0.00 39.59 2.24
1932 2069 1.798813 GGTCAGCACGGACAAAAGTAG 59.201 52.381 3.41 0.00 39.59 2.57
1933 2070 2.547218 GGTCAGCACGGACAAAAGTAGA 60.547 50.000 3.41 0.00 39.59 2.59
1934 2071 2.731976 GTCAGCACGGACAAAAGTAGAG 59.268 50.000 0.00 0.00 37.73 2.43
1935 2072 2.069273 CAGCACGGACAAAAGTAGAGG 58.931 52.381 0.00 0.00 0.00 3.69
1936 2073 0.796927 GCACGGACAAAAGTAGAGGC 59.203 55.000 0.00 0.00 0.00 4.70
1937 2074 1.068474 CACGGACAAAAGTAGAGGCG 58.932 55.000 0.00 0.00 0.00 5.52
1938 2075 0.669625 ACGGACAAAAGTAGAGGCGC 60.670 55.000 0.00 0.00 0.00 6.53
1939 2076 0.669318 CGGACAAAAGTAGAGGCGCA 60.669 55.000 10.83 0.00 0.00 6.09
1940 2077 1.519408 GGACAAAAGTAGAGGCGCAA 58.481 50.000 10.83 0.00 0.00 4.85
1941 2078 1.197036 GGACAAAAGTAGAGGCGCAAC 59.803 52.381 10.83 1.62 0.00 4.17
1942 2079 0.865769 ACAAAAGTAGAGGCGCAACG 59.134 50.000 10.83 0.00 0.00 4.10
1943 2080 0.865769 CAAAAGTAGAGGCGCAACGT 59.134 50.000 10.83 0.00 0.00 3.99
1944 2081 2.063266 CAAAAGTAGAGGCGCAACGTA 58.937 47.619 10.83 0.00 0.00 3.57
1945 2082 1.706443 AAAGTAGAGGCGCAACGTAC 58.294 50.000 10.83 5.00 0.00 3.67
1946 2083 0.108945 AAGTAGAGGCGCAACGTACC 60.109 55.000 10.83 0.00 0.00 3.34
1947 2084 1.870901 GTAGAGGCGCAACGTACCG 60.871 63.158 10.83 0.00 0.00 4.02
1948 2085 2.039974 TAGAGGCGCAACGTACCGA 61.040 57.895 10.83 0.00 0.00 4.69
1949 2086 2.257286 TAGAGGCGCAACGTACCGAC 62.257 60.000 10.83 8.56 0.00 4.79
1950 2087 4.729856 AGGCGCAACGTACCGACC 62.730 66.667 10.83 10.33 31.47 4.79
1953 2090 2.356075 CGCAACGTACCGACCCAA 60.356 61.111 1.96 0.00 0.00 4.12
1954 2091 1.955157 CGCAACGTACCGACCCAAA 60.955 57.895 1.96 0.00 0.00 3.28
1955 2092 1.570967 GCAACGTACCGACCCAAAC 59.429 57.895 0.00 0.00 0.00 2.93
1956 2093 1.844771 GCAACGTACCGACCCAAACC 61.845 60.000 0.00 0.00 0.00 3.27
1957 2094 1.071299 AACGTACCGACCCAAACCC 59.929 57.895 0.00 0.00 0.00 4.11
1958 2095 1.694133 AACGTACCGACCCAAACCCA 61.694 55.000 0.00 0.00 0.00 4.51
1959 2096 1.071128 CGTACCGACCCAAACCCAA 59.929 57.895 0.00 0.00 0.00 4.12
1960 2097 0.534652 CGTACCGACCCAAACCCAAA 60.535 55.000 0.00 0.00 0.00 3.28
1961 2098 1.883209 CGTACCGACCCAAACCCAAAT 60.883 52.381 0.00 0.00 0.00 2.32
1962 2099 1.814394 GTACCGACCCAAACCCAAATC 59.186 52.381 0.00 0.00 0.00 2.17
1963 2100 0.891904 ACCGACCCAAACCCAAATCG 60.892 55.000 0.00 0.00 0.00 3.34
1964 2101 1.211709 CGACCCAAACCCAAATCGC 59.788 57.895 0.00 0.00 0.00 4.58
1965 2102 1.519751 CGACCCAAACCCAAATCGCA 61.520 55.000 0.00 0.00 0.00 5.10
1966 2103 0.894835 GACCCAAACCCAAATCGCAT 59.105 50.000 0.00 0.00 0.00 4.73
1967 2104 1.275010 GACCCAAACCCAAATCGCATT 59.725 47.619 0.00 0.00 0.00 3.56
1968 2105 1.275010 ACCCAAACCCAAATCGCATTC 59.725 47.619 0.00 0.00 0.00 2.67
1969 2106 1.627879 CCAAACCCAAATCGCATTCG 58.372 50.000 0.00 0.00 0.00 3.34
1970 2107 0.991344 CAAACCCAAATCGCATTCGC 59.009 50.000 0.00 0.00 35.26 4.70
1988 2125 2.505557 GCTGACGCATTTGCAGCC 60.506 61.111 0.00 0.00 46.94 4.85
1989 2126 2.202388 CTGACGCATTTGCAGCCG 60.202 61.111 3.13 0.00 42.21 5.52
1990 2127 2.667874 TGACGCATTTGCAGCCGA 60.668 55.556 3.13 0.00 42.21 5.54
1991 2128 2.186350 CTGACGCATTTGCAGCCGAA 62.186 55.000 3.13 0.00 42.21 4.30
1992 2129 1.081509 GACGCATTTGCAGCCGAAA 60.082 52.632 3.13 0.00 42.21 3.46
1993 2130 0.456653 GACGCATTTGCAGCCGAAAT 60.457 50.000 3.13 0.00 42.21 2.17
1994 2131 0.733566 ACGCATTTGCAGCCGAAATG 60.734 50.000 12.01 12.01 41.71 2.32
1996 2133 1.992947 CATTTGCAGCCGAAATGCG 59.007 52.632 5.50 0.00 46.87 4.73
1997 2134 0.733566 CATTTGCAGCCGAAATGCGT 60.734 50.000 5.50 0.00 46.87 5.24
1998 2135 0.456653 ATTTGCAGCCGAAATGCGTC 60.457 50.000 0.00 0.00 46.87 5.19
1999 2136 2.778551 TTTGCAGCCGAAATGCGTCG 62.779 55.000 0.00 0.00 46.87 5.12
2065 2202 4.065281 GTCCCCACCTGACGGTCG 62.065 72.222 3.34 0.00 43.24 4.79
2066 2203 4.608774 TCCCCACCTGACGGTCGT 62.609 66.667 3.34 0.00 43.24 4.34
2067 2204 4.065281 CCCCACCTGACGGTCGTC 62.065 72.222 15.60 15.60 43.24 4.20
2068 2205 4.065281 CCCACCTGACGGTCGTCC 62.065 72.222 18.96 4.02 43.24 4.79
2069 2206 3.299977 CCACCTGACGGTCGTCCA 61.300 66.667 18.96 7.92 43.24 4.02
2070 2207 2.732016 CACCTGACGGTCGTCCAA 59.268 61.111 18.96 2.67 43.24 3.53
2071 2208 1.663702 CACCTGACGGTCGTCCAAC 60.664 63.158 18.96 0.00 43.24 3.77
2072 2209 1.831286 ACCTGACGGTCGTCCAACT 60.831 57.895 18.96 0.00 40.27 3.16
2073 2210 0.538057 ACCTGACGGTCGTCCAACTA 60.538 55.000 18.96 1.33 40.27 2.24
2074 2211 0.109412 CCTGACGGTCGTCCAACTAC 60.109 60.000 18.96 0.00 43.97 2.73
2075 2212 0.109412 CTGACGGTCGTCCAACTACC 60.109 60.000 18.96 0.00 43.97 3.18
2076 2213 1.213799 GACGGTCGTCCAACTACCC 59.786 63.158 11.96 0.00 39.08 3.69
2077 2214 1.526575 GACGGTCGTCCAACTACCCA 61.527 60.000 11.96 0.00 39.08 4.51
2078 2215 1.214589 CGGTCGTCCAACTACCCAG 59.785 63.158 0.00 0.00 30.83 4.45
2079 2216 1.079336 GGTCGTCCAACTACCCAGC 60.079 63.158 0.00 0.00 28.47 4.85
2080 2217 1.445582 GTCGTCCAACTACCCAGCG 60.446 63.158 0.00 0.00 0.00 5.18
2081 2218 2.125673 CGTCCAACTACCCAGCGG 60.126 66.667 0.00 0.00 0.00 5.52
2082 2219 2.436115 GTCCAACTACCCAGCGGC 60.436 66.667 0.00 0.00 0.00 6.53
2083 2220 3.712907 TCCAACTACCCAGCGGCC 61.713 66.667 0.00 0.00 0.00 6.13
2084 2221 4.028490 CCAACTACCCAGCGGCCA 62.028 66.667 2.24 0.00 0.00 5.36
2085 2222 2.436646 CAACTACCCAGCGGCCAG 60.437 66.667 2.24 0.00 0.00 4.85
2086 2223 2.928396 AACTACCCAGCGGCCAGT 60.928 61.111 2.24 0.00 30.71 4.00
2087 2224 1.611261 AACTACCCAGCGGCCAGTA 60.611 57.895 2.24 0.00 29.62 2.74
2088 2225 0.981277 AACTACCCAGCGGCCAGTAT 60.981 55.000 2.24 0.00 29.62 2.12
2089 2226 1.069765 CTACCCAGCGGCCAGTATG 59.930 63.158 2.24 0.00 0.00 2.39
2108 2245 8.437360 CAGTATGGTCAGCTTAATTTATGACA 57.563 34.615 9.63 0.00 43.03 3.58
2109 2246 8.892723 CAGTATGGTCAGCTTAATTTATGACAA 58.107 33.333 9.63 1.25 43.03 3.18
2110 2247 8.893727 AGTATGGTCAGCTTAATTTATGACAAC 58.106 33.333 9.63 5.88 43.03 3.32
2111 2248 7.944729 ATGGTCAGCTTAATTTATGACAACT 57.055 32.000 9.63 0.00 43.03 3.16
2112 2249 7.144722 TGGTCAGCTTAATTTATGACAACTG 57.855 36.000 9.63 0.00 43.03 3.16
2113 2250 6.030228 GGTCAGCTTAATTTATGACAACTGC 58.970 40.000 9.63 0.00 43.03 4.40
2114 2251 6.030228 GTCAGCTTAATTTATGACAACTGCC 58.970 40.000 0.00 0.00 41.32 4.85
2115 2252 5.125417 TCAGCTTAATTTATGACAACTGCCC 59.875 40.000 0.00 0.00 0.00 5.36
2116 2253 5.016173 AGCTTAATTTATGACAACTGCCCA 58.984 37.500 0.00 0.00 0.00 5.36
2117 2254 5.102313 GCTTAATTTATGACAACTGCCCAC 58.898 41.667 0.00 0.00 0.00 4.61
2118 2255 5.650543 CTTAATTTATGACAACTGCCCACC 58.349 41.667 0.00 0.00 0.00 4.61
2119 2256 2.969821 TTTATGACAACTGCCCACCT 57.030 45.000 0.00 0.00 0.00 4.00
2120 2257 2.489938 TTATGACAACTGCCCACCTC 57.510 50.000 0.00 0.00 0.00 3.85
2121 2258 1.357137 TATGACAACTGCCCACCTCA 58.643 50.000 0.00 0.00 0.00 3.86
2122 2259 0.037303 ATGACAACTGCCCACCTCAG 59.963 55.000 0.00 0.00 37.56 3.35
2123 2260 1.302832 GACAACTGCCCACCTCAGG 60.303 63.158 0.00 0.00 35.94 3.86
2130 2267 4.351054 CCCACCTCAGGCCCACAC 62.351 72.222 0.00 0.00 0.00 3.82
2131 2268 4.704833 CCACCTCAGGCCCACACG 62.705 72.222 0.00 0.00 0.00 4.49
2132 2269 3.941188 CACCTCAGGCCCACACGT 61.941 66.667 0.00 0.00 0.00 4.49
2133 2270 3.626924 ACCTCAGGCCCACACGTC 61.627 66.667 0.00 0.00 0.00 4.34
2134 2271 3.625897 CCTCAGGCCCACACGTCA 61.626 66.667 0.00 0.00 0.00 4.35
2135 2272 2.047844 CTCAGGCCCACACGTCAG 60.048 66.667 0.00 0.00 0.00 3.51
2136 2273 4.314440 TCAGGCCCACACGTCAGC 62.314 66.667 0.00 0.00 0.00 4.26
2137 2274 4.624364 CAGGCCCACACGTCAGCA 62.624 66.667 0.00 0.00 0.00 4.41
2138 2275 3.872603 AGGCCCACACGTCAGCAA 61.873 61.111 0.00 0.00 0.00 3.91
2139 2276 3.660111 GGCCCACACGTCAGCAAC 61.660 66.667 0.00 0.00 0.00 4.17
2172 2309 0.860533 TTTTTAAGTCGACCGTGCGG 59.139 50.000 13.01 9.29 42.03 5.69
2173 2310 0.945265 TTTTAAGTCGACCGTGCGGG 60.945 55.000 13.01 0.00 43.62 6.13
2174 2311 1.804396 TTTAAGTCGACCGTGCGGGA 61.804 55.000 13.01 0.57 39.97 5.14
2175 2312 2.203972 TTAAGTCGACCGTGCGGGAG 62.204 60.000 13.01 8.24 39.97 4.30
2193 2330 3.537874 GGGGGTCGTCCTCATCCG 61.538 72.222 0.00 0.00 35.50 4.18
2194 2331 4.222847 GGGGTCGTCCTCATCCGC 62.223 72.222 0.00 0.00 33.58 5.54
2195 2332 3.148279 GGGTCGTCCTCATCCGCT 61.148 66.667 0.00 0.00 0.00 5.52
2196 2333 2.722201 GGGTCGTCCTCATCCGCTT 61.722 63.158 0.00 0.00 0.00 4.68
2197 2334 1.227002 GGTCGTCCTCATCCGCTTC 60.227 63.158 0.00 0.00 0.00 3.86
2198 2335 1.227002 GTCGTCCTCATCCGCTTCC 60.227 63.158 0.00 0.00 0.00 3.46
2199 2336 1.680989 TCGTCCTCATCCGCTTCCA 60.681 57.895 0.00 0.00 0.00 3.53
2200 2337 1.218047 CGTCCTCATCCGCTTCCAA 59.782 57.895 0.00 0.00 0.00 3.53
2201 2338 0.391130 CGTCCTCATCCGCTTCCAAA 60.391 55.000 0.00 0.00 0.00 3.28
2202 2339 1.373570 GTCCTCATCCGCTTCCAAAG 58.626 55.000 0.00 0.00 0.00 2.77
2203 2340 1.066143 GTCCTCATCCGCTTCCAAAGA 60.066 52.381 0.00 0.00 0.00 2.52
2204 2341 1.628340 TCCTCATCCGCTTCCAAAGAA 59.372 47.619 0.00 0.00 0.00 2.52
2205 2342 2.039746 TCCTCATCCGCTTCCAAAGAAA 59.960 45.455 0.00 0.00 0.00 2.52
2206 2343 2.162408 CCTCATCCGCTTCCAAAGAAAC 59.838 50.000 0.00 0.00 0.00 2.78
2207 2344 3.077359 CTCATCCGCTTCCAAAGAAACT 58.923 45.455 0.00 0.00 0.00 2.66
2208 2345 3.074412 TCATCCGCTTCCAAAGAAACTC 58.926 45.455 0.00 0.00 0.00 3.01
2209 2346 1.892209 TCCGCTTCCAAAGAAACTCC 58.108 50.000 0.00 0.00 0.00 3.85
2210 2347 0.881796 CCGCTTCCAAAGAAACTCCC 59.118 55.000 0.00 0.00 0.00 4.30
2211 2348 0.881796 CGCTTCCAAAGAAACTCCCC 59.118 55.000 0.00 0.00 0.00 4.81
2212 2349 0.881796 GCTTCCAAAGAAACTCCCCG 59.118 55.000 0.00 0.00 0.00 5.73
2213 2350 1.818131 GCTTCCAAAGAAACTCCCCGT 60.818 52.381 0.00 0.00 0.00 5.28
2214 2351 2.152016 CTTCCAAAGAAACTCCCCGTC 58.848 52.381 0.00 0.00 0.00 4.79
2215 2352 0.399075 TCCAAAGAAACTCCCCGTCC 59.601 55.000 0.00 0.00 0.00 4.79
2216 2353 0.608308 CCAAAGAAACTCCCCGTCCC 60.608 60.000 0.00 0.00 0.00 4.46
2217 2354 0.608308 CAAAGAAACTCCCCGTCCCC 60.608 60.000 0.00 0.00 0.00 4.81
2218 2355 1.063654 AAAGAAACTCCCCGTCCCCA 61.064 55.000 0.00 0.00 0.00 4.96
2219 2356 0.845102 AAGAAACTCCCCGTCCCCAT 60.845 55.000 0.00 0.00 0.00 4.00
2220 2357 1.223763 GAAACTCCCCGTCCCCATC 59.776 63.158 0.00 0.00 0.00 3.51
2221 2358 1.229853 AAACTCCCCGTCCCCATCT 60.230 57.895 0.00 0.00 0.00 2.90
2222 2359 1.272554 AAACTCCCCGTCCCCATCTC 61.273 60.000 0.00 0.00 0.00 2.75
2223 2360 3.227276 CTCCCCGTCCCCATCTCG 61.227 72.222 0.00 0.00 0.00 4.04
2226 2363 3.917760 CCCGTCCCCATCTCGCTC 61.918 72.222 0.00 0.00 0.00 5.03
2227 2364 3.917760 CCGTCCCCATCTCGCTCC 61.918 72.222 0.00 0.00 0.00 4.70
2228 2365 3.917760 CGTCCCCATCTCGCTCCC 61.918 72.222 0.00 0.00 0.00 4.30
2229 2366 3.551407 GTCCCCATCTCGCTCCCC 61.551 72.222 0.00 0.00 0.00 4.81
2230 2367 4.880426 TCCCCATCTCGCTCCCCC 62.880 72.222 0.00 0.00 0.00 5.40
2232 2369 2.851102 CCCATCTCGCTCCCCCAT 60.851 66.667 0.00 0.00 0.00 4.00
2233 2370 2.746359 CCATCTCGCTCCCCCATC 59.254 66.667 0.00 0.00 0.00 3.51
2234 2371 2.341543 CATCTCGCTCCCCCATCG 59.658 66.667 0.00 0.00 0.00 3.84
2235 2372 2.919856 ATCTCGCTCCCCCATCGG 60.920 66.667 0.00 0.00 0.00 4.18
2241 2378 3.781307 CTCCCCCATCGGCGACAA 61.781 66.667 13.76 0.00 0.00 3.18
2242 2379 4.090588 TCCCCCATCGGCGACAAC 62.091 66.667 13.76 0.00 0.00 3.32
2245 2382 4.096003 CCCATCGGCGACAACCCT 62.096 66.667 13.76 0.00 0.00 4.34
2246 2383 2.727392 CCCATCGGCGACAACCCTA 61.727 63.158 13.76 0.00 0.00 3.53
2247 2384 1.227263 CCATCGGCGACAACCCTAG 60.227 63.158 13.76 0.00 0.00 3.02
2248 2385 1.883084 CATCGGCGACAACCCTAGC 60.883 63.158 13.76 0.00 0.00 3.42
2249 2386 3.090219 ATCGGCGACAACCCTAGCC 62.090 63.158 13.76 0.00 45.67 3.93
2252 2389 2.436115 GCGACAACCCTAGCCACC 60.436 66.667 0.00 0.00 0.00 4.61
2253 2390 2.267961 CGACAACCCTAGCCACCC 59.732 66.667 0.00 0.00 0.00 4.61
2254 2391 2.291043 CGACAACCCTAGCCACCCT 61.291 63.158 0.00 0.00 0.00 4.34
2255 2392 0.974010 CGACAACCCTAGCCACCCTA 60.974 60.000 0.00 0.00 0.00 3.53
2256 2393 0.831307 GACAACCCTAGCCACCCTAG 59.169 60.000 0.00 0.00 42.68 3.02
2257 2394 0.118547 ACAACCCTAGCCACCCTAGT 59.881 55.000 0.00 0.00 41.68 2.57
2258 2395 0.831307 CAACCCTAGCCACCCTAGTC 59.169 60.000 0.00 0.00 41.68 2.59
2259 2396 0.416231 AACCCTAGCCACCCTAGTCA 59.584 55.000 0.00 0.00 41.68 3.41
2260 2397 0.416231 ACCCTAGCCACCCTAGTCAA 59.584 55.000 0.00 0.00 41.68 3.18
2261 2398 1.123928 CCCTAGCCACCCTAGTCAAG 58.876 60.000 0.00 0.00 41.68 3.02
2262 2399 0.466124 CCTAGCCACCCTAGTCAAGC 59.534 60.000 0.00 0.00 41.68 4.01
2263 2400 0.466124 CTAGCCACCCTAGTCAAGCC 59.534 60.000 0.00 0.00 38.98 4.35
2264 2401 0.252513 TAGCCACCCTAGTCAAGCCA 60.253 55.000 0.00 0.00 0.00 4.75
2265 2402 1.078143 GCCACCCTAGTCAAGCCAG 60.078 63.158 0.00 0.00 0.00 4.85
2266 2403 1.553690 GCCACCCTAGTCAAGCCAGA 61.554 60.000 0.00 0.00 0.00 3.86
2267 2404 1.207791 CCACCCTAGTCAAGCCAGAT 58.792 55.000 0.00 0.00 0.00 2.90
2268 2405 1.134280 CCACCCTAGTCAAGCCAGATG 60.134 57.143 0.00 0.00 0.00 2.90
2269 2406 1.134280 CACCCTAGTCAAGCCAGATGG 60.134 57.143 0.00 0.00 38.53 3.51
2270 2407 0.471617 CCCTAGTCAAGCCAGATGGG 59.528 60.000 0.12 0.00 40.85 4.00
2280 2417 1.445095 CCAGATGGGCTCTTCTCCG 59.555 63.158 0.00 0.00 29.16 4.63
2281 2418 1.445095 CAGATGGGCTCTTCTCCGG 59.555 63.158 0.00 0.00 29.16 5.14
2282 2419 2.110006 GATGGGCTCTTCTCCGGC 59.890 66.667 0.00 0.00 0.00 6.13
2283 2420 2.688666 ATGGGCTCTTCTCCGGCA 60.689 61.111 0.00 0.00 0.00 5.69
2284 2421 2.049627 GATGGGCTCTTCTCCGGCAT 62.050 60.000 0.00 0.00 0.00 4.40
2285 2422 1.639635 ATGGGCTCTTCTCCGGCATT 61.640 55.000 0.00 0.00 0.00 3.56
2286 2423 1.821332 GGGCTCTTCTCCGGCATTG 60.821 63.158 0.00 0.00 0.00 2.82
2287 2424 1.221840 GGCTCTTCTCCGGCATTGA 59.778 57.895 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 60 0.683179 AGGACGATGACGATGACCCA 60.683 55.000 0.00 0.00 42.66 4.51
73 82 1.032657 CAGACCGACCTCGACTCCAT 61.033 60.000 0.00 0.00 43.02 3.41
74 83 1.674651 CAGACCGACCTCGACTCCA 60.675 63.158 0.00 0.00 43.02 3.86
88 97 4.208632 CCATCGTTCCTGGCAGAC 57.791 61.111 17.94 6.14 0.00 3.51
176 185 4.246206 CTATCGCGCCGTCGGTGA 62.246 66.667 28.52 16.20 34.74 4.02
215 224 2.300152 TGGGCTCCTAATGATCATCGTC 59.700 50.000 9.06 0.00 0.00 4.20
222 231 3.243724 GACCTACTGGGCTCCTAATGAT 58.756 50.000 0.00 0.00 38.69 2.45
303 312 2.415090 GGCAGTTGACATCATTCACTGC 60.415 50.000 21.21 21.21 43.04 4.40
354 363 4.800914 GCCAGTAAAGAAGAGCTGAAGACA 60.801 45.833 0.00 0.00 0.00 3.41
517 526 2.854076 CAAGGCCAACCCCTTCCT 59.146 61.111 5.01 0.00 43.23 3.36
531 540 2.307934 GCTCTAGCTCCAACTCCAAG 57.692 55.000 0.00 0.00 38.21 3.61
570 579 4.651503 TCTCTTCTCTCACTGTCAACCTTT 59.348 41.667 0.00 0.00 0.00 3.11
642 655 1.713647 TGTCACTCTCCTCCTCCTCTT 59.286 52.381 0.00 0.00 0.00 2.85
716 757 4.587891 TGCACATAATTCATGGAGTCACA 58.412 39.130 0.00 0.00 39.13 3.58
732 773 0.388659 GCTCTCCTCGATCTGCACAT 59.611 55.000 0.00 0.00 0.00 3.21
820 861 1.595109 CAGCAGCACAACCTCGTCA 60.595 57.895 0.00 0.00 0.00 4.35
856 897 3.068691 CCCTCAGGCGTCTTCGGA 61.069 66.667 3.00 0.00 37.56 4.55
926 974 2.402564 CATCCTCCTGATGGTAGTGGT 58.597 52.381 0.00 0.00 45.99 4.16
978 1026 0.169009 GGATGCACTCAAACTTCGGC 59.831 55.000 0.00 0.00 0.00 5.54
1005 1053 0.839946 AGTGCTTGGTGAAGTCCAGT 59.160 50.000 0.00 0.00 38.80 4.00
1093 1141 0.392998 GTCACCCTGCCGTTCATCAT 60.393 55.000 0.00 0.00 0.00 2.45
1175 1223 0.687354 GGGAGTGAGGAGCTTGAACA 59.313 55.000 0.00 0.00 0.00 3.18
1229 1277 2.872245 CACTTGTTGACGACCTCAATGT 59.128 45.455 0.00 0.00 41.10 2.71
1309 1357 5.048294 TGTTCAAAGCAGACTCGATAGTACA 60.048 40.000 0.00 0.00 35.56 2.90
1565 1670 0.535335 CATGCCTTCTTGCCTGCATT 59.465 50.000 0.00 0.00 42.22 3.56
1578 1683 1.837947 TTTGGTTGCCTGCATGCCT 60.838 52.632 16.68 0.00 0.00 4.75
1636 1773 1.761174 GCTTCTCCACCCAACCTGA 59.239 57.895 0.00 0.00 0.00 3.86
1654 1791 0.581529 CAGTACCCGCATTGCATACG 59.418 55.000 9.69 0.00 0.00 3.06
1708 1845 4.625972 TGCGTCTATGATGACTTCGTAA 57.374 40.909 0.00 0.00 35.00 3.18
1709 1846 4.610680 CGATGCGTCTATGATGACTTCGTA 60.611 45.833 4.05 0.00 35.00 3.43
1710 1847 3.633235 GATGCGTCTATGATGACTTCGT 58.367 45.455 0.00 0.00 35.00 3.85
1711 1848 2.654056 CGATGCGTCTATGATGACTTCG 59.346 50.000 4.05 0.00 35.00 3.79
1712 1849 3.633235 ACGATGCGTCTATGATGACTTC 58.367 45.455 4.05 0.00 33.69 3.01
1713 1850 3.717400 ACGATGCGTCTATGATGACTT 57.283 42.857 4.05 0.00 33.69 3.01
1714 1851 3.815962 ACTACGATGCGTCTATGATGACT 59.184 43.478 4.05 0.00 41.54 3.41
1715 1852 4.148563 ACTACGATGCGTCTATGATGAC 57.851 45.455 4.05 0.00 41.54 3.06
1716 1853 3.120649 CGACTACGATGCGTCTATGATGA 60.121 47.826 4.05 0.00 41.54 2.92
1717 1854 3.120649 TCGACTACGATGCGTCTATGATG 60.121 47.826 4.05 0.00 43.81 3.07
1718 1855 3.064931 TCGACTACGATGCGTCTATGAT 58.935 45.455 4.05 0.00 43.81 2.45
1719 1856 2.476821 TCGACTACGATGCGTCTATGA 58.523 47.619 4.05 0.00 43.81 2.15
1720 1857 2.943843 TCGACTACGATGCGTCTATG 57.056 50.000 4.05 0.00 43.81 2.23
1731 1868 0.731417 AGACGTTCCCATCGACTACG 59.269 55.000 0.00 0.00 41.26 3.51
1732 1869 1.065251 GGAGACGTTCCCATCGACTAC 59.935 57.143 0.00 0.00 40.37 2.73
1733 1870 1.386533 GGAGACGTTCCCATCGACTA 58.613 55.000 0.00 0.00 40.37 2.59
1734 1871 2.190756 GGAGACGTTCCCATCGACT 58.809 57.895 0.00 0.00 40.37 4.18
1735 1872 4.808649 GGAGACGTTCCCATCGAC 57.191 61.111 0.00 0.00 40.37 4.20
1743 1880 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
1744 1881 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
1745 1882 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
1746 1883 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
1747 1884 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
1748 1885 0.832135 ACGCTTTCAGTGGGAGGAGA 60.832 55.000 0.00 0.00 0.00 3.71
1749 1886 0.671781 CACGCTTTCAGTGGGAGGAG 60.672 60.000 0.00 0.00 36.06 3.69
1750 1887 1.371183 CACGCTTTCAGTGGGAGGA 59.629 57.895 0.00 0.00 36.06 3.71
1751 1888 0.951040 GACACGCTTTCAGTGGGAGG 60.951 60.000 0.00 0.00 43.41 4.30
1752 1889 1.284982 CGACACGCTTTCAGTGGGAG 61.285 60.000 0.00 0.00 43.41 4.30
1753 1890 1.300620 CGACACGCTTTCAGTGGGA 60.301 57.895 0.00 0.00 43.41 4.37
1754 1891 3.244105 CGACACGCTTTCAGTGGG 58.756 61.111 1.39 0.00 43.41 4.61
1765 1902 1.011968 TCAGGATTTTCGGCGACACG 61.012 55.000 10.16 0.00 0.00 4.49
1766 1903 1.153353 TTCAGGATTTTCGGCGACAC 58.847 50.000 10.16 0.84 0.00 3.67
1767 1904 1.885560 TTTCAGGATTTTCGGCGACA 58.114 45.000 10.16 0.00 0.00 4.35
1768 1905 4.609691 TTATTTCAGGATTTTCGGCGAC 57.390 40.909 10.16 0.00 0.00 5.19
1769 1906 5.220970 GGATTTATTTCAGGATTTTCGGCGA 60.221 40.000 4.99 4.99 0.00 5.54
1770 1907 4.976116 GGATTTATTTCAGGATTTTCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
1771 1908 5.901552 TGGATTTATTTCAGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
1780 1917 7.040478 TCGCATTTATCCTGGATTTATTTCAGG 60.040 37.037 15.55 0.00 46.91 3.86
1781 1918 7.874940 TCGCATTTATCCTGGATTTATTTCAG 58.125 34.615 15.55 1.04 0.00 3.02
1782 1919 7.522073 GCTCGCATTTATCCTGGATTTATTTCA 60.522 37.037 15.55 0.00 0.00 2.69
1783 1920 6.803807 GCTCGCATTTATCCTGGATTTATTTC 59.196 38.462 15.55 0.09 0.00 2.17
1784 1921 6.265196 TGCTCGCATTTATCCTGGATTTATTT 59.735 34.615 15.55 0.00 0.00 1.40
1785 1922 5.769662 TGCTCGCATTTATCCTGGATTTATT 59.230 36.000 15.55 0.00 0.00 1.40
1786 1923 5.182001 GTGCTCGCATTTATCCTGGATTTAT 59.818 40.000 15.55 5.99 0.00 1.40
1787 1924 4.515191 GTGCTCGCATTTATCCTGGATTTA 59.485 41.667 15.55 3.70 0.00 1.40
1788 1925 3.316308 GTGCTCGCATTTATCCTGGATTT 59.684 43.478 15.55 0.00 0.00 2.17
1789 1926 2.880890 GTGCTCGCATTTATCCTGGATT 59.119 45.455 15.55 0.00 0.00 3.01
1790 1927 2.498167 GTGCTCGCATTTATCCTGGAT 58.502 47.619 14.66 14.66 0.00 3.41
1791 1928 1.475034 GGTGCTCGCATTTATCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
1792 1929 0.947244 GGTGCTCGCATTTATCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
1793 1930 1.600957 CTGGTGCTCGCATTTATCCTG 59.399 52.381 0.00 0.00 0.00 3.86
1794 1931 1.475751 CCTGGTGCTCGCATTTATCCT 60.476 52.381 0.00 0.00 0.00 3.24
1795 1932 0.947244 CCTGGTGCTCGCATTTATCC 59.053 55.000 0.00 0.00 0.00 2.59
1796 1933 1.953559 TCCTGGTGCTCGCATTTATC 58.046 50.000 0.00 0.00 0.00 1.75
1797 1934 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
1798 1935 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
1799 1936 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
1800 1937 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
1801 1938 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
1802 1939 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
1803 1940 0.449388 CTTCAAATCCTGGTGCTCGC 59.551 55.000 0.00 0.00 0.00 5.03
1804 1941 0.449388 GCTTCAAATCCTGGTGCTCG 59.551 55.000 0.00 0.00 0.00 5.03
1805 1942 0.813821 GGCTTCAAATCCTGGTGCTC 59.186 55.000 0.00 0.00 0.00 4.26
1806 1943 0.407139 AGGCTTCAAATCCTGGTGCT 59.593 50.000 0.00 0.00 0.00 4.40
1807 1944 0.529378 CAGGCTTCAAATCCTGGTGC 59.471 55.000 4.97 0.00 44.64 5.01
1812 1949 1.642762 ACCCATCAGGCTTCAAATCCT 59.357 47.619 0.00 0.00 40.58 3.24
1813 1950 2.149973 ACCCATCAGGCTTCAAATCC 57.850 50.000 0.00 0.00 40.58 3.01
1814 1951 2.167075 CCAACCCATCAGGCTTCAAATC 59.833 50.000 0.00 0.00 40.58 2.17
1815 1952 2.181975 CCAACCCATCAGGCTTCAAAT 58.818 47.619 0.00 0.00 40.58 2.32
1816 1953 1.631405 CCAACCCATCAGGCTTCAAA 58.369 50.000 0.00 0.00 40.58 2.69
1817 1954 0.251742 CCCAACCCATCAGGCTTCAA 60.252 55.000 0.00 0.00 40.58 2.69
1818 1955 1.139498 TCCCAACCCATCAGGCTTCA 61.139 55.000 0.00 0.00 40.58 3.02
1819 1956 0.039618 TTCCCAACCCATCAGGCTTC 59.960 55.000 0.00 0.00 40.58 3.86
1820 1957 0.712380 ATTCCCAACCCATCAGGCTT 59.288 50.000 0.00 0.00 40.58 4.35
1821 1958 1.215423 GTATTCCCAACCCATCAGGCT 59.785 52.381 0.00 0.00 40.58 4.58
1822 1959 1.692411 GTATTCCCAACCCATCAGGC 58.308 55.000 0.00 0.00 40.58 4.85
1823 1960 1.568597 TGGTATTCCCAACCCATCAGG 59.431 52.381 0.00 0.00 41.50 3.86
1833 1970 2.845659 AGATGGACAGTGGTATTCCCA 58.154 47.619 0.00 0.00 42.51 4.37
1834 1971 5.071788 TGATTAGATGGACAGTGGTATTCCC 59.928 44.000 0.00 0.00 0.00 3.97
1835 1972 6.174720 TGATTAGATGGACAGTGGTATTCC 57.825 41.667 0.00 0.00 0.00 3.01
1836 1973 6.876257 GGATGATTAGATGGACAGTGGTATTC 59.124 42.308 0.00 0.00 0.00 1.75
1837 1974 6.560304 AGGATGATTAGATGGACAGTGGTATT 59.440 38.462 0.00 0.00 0.00 1.89
1838 1975 6.087456 AGGATGATTAGATGGACAGTGGTAT 58.913 40.000 0.00 0.00 0.00 2.73
1839 1976 5.467738 AGGATGATTAGATGGACAGTGGTA 58.532 41.667 0.00 0.00 0.00 3.25
1840 1977 4.302067 AGGATGATTAGATGGACAGTGGT 58.698 43.478 0.00 0.00 0.00 4.16
1841 1978 4.970860 AGGATGATTAGATGGACAGTGG 57.029 45.455 0.00 0.00 0.00 4.00
1842 1979 7.295322 TCTTAGGATGATTAGATGGACAGTG 57.705 40.000 0.00 0.00 0.00 3.66
1843 1980 7.345653 TGTTCTTAGGATGATTAGATGGACAGT 59.654 37.037 0.00 0.00 0.00 3.55
1844 1981 7.730084 TGTTCTTAGGATGATTAGATGGACAG 58.270 38.462 0.00 0.00 0.00 3.51
1845 1982 7.675161 TGTTCTTAGGATGATTAGATGGACA 57.325 36.000 0.00 0.00 0.00 4.02
1846 1983 8.207545 AGTTGTTCTTAGGATGATTAGATGGAC 58.792 37.037 0.00 0.00 0.00 4.02
1847 1984 8.324191 AGTTGTTCTTAGGATGATTAGATGGA 57.676 34.615 0.00 0.00 0.00 3.41
1848 1985 7.659390 GGAGTTGTTCTTAGGATGATTAGATGG 59.341 40.741 0.00 0.00 0.00 3.51
1849 1986 8.206867 TGGAGTTGTTCTTAGGATGATTAGATG 58.793 37.037 0.00 0.00 0.00 2.90
1850 1987 8.324191 TGGAGTTGTTCTTAGGATGATTAGAT 57.676 34.615 0.00 0.00 0.00 1.98
1851 1988 7.733773 TGGAGTTGTTCTTAGGATGATTAGA 57.266 36.000 0.00 0.00 0.00 2.10
1852 1989 7.010552 CGTTGGAGTTGTTCTTAGGATGATTAG 59.989 40.741 0.00 0.00 0.00 1.73
1853 1990 6.816640 CGTTGGAGTTGTTCTTAGGATGATTA 59.183 38.462 0.00 0.00 0.00 1.75
1854 1991 5.643777 CGTTGGAGTTGTTCTTAGGATGATT 59.356 40.000 0.00 0.00 0.00 2.57
1855 1992 5.178797 CGTTGGAGTTGTTCTTAGGATGAT 58.821 41.667 0.00 0.00 0.00 2.45
1856 1993 4.562757 CCGTTGGAGTTGTTCTTAGGATGA 60.563 45.833 0.00 0.00 0.00 2.92
1857 1994 3.684788 CCGTTGGAGTTGTTCTTAGGATG 59.315 47.826 0.00 0.00 0.00 3.51
1858 1995 3.307480 CCCGTTGGAGTTGTTCTTAGGAT 60.307 47.826 0.00 0.00 0.00 3.24
1859 1996 2.038033 CCCGTTGGAGTTGTTCTTAGGA 59.962 50.000 0.00 0.00 0.00 2.94
1860 1997 2.423577 CCCGTTGGAGTTGTTCTTAGG 58.576 52.381 0.00 0.00 0.00 2.69
1861 1998 2.423577 CCCCGTTGGAGTTGTTCTTAG 58.576 52.381 0.00 0.00 35.39 2.18
1862 1999 1.543871 GCCCCGTTGGAGTTGTTCTTA 60.544 52.381 0.00 0.00 35.39 2.10
1863 2000 0.822121 GCCCCGTTGGAGTTGTTCTT 60.822 55.000 0.00 0.00 35.39 2.52
1864 2001 1.228154 GCCCCGTTGGAGTTGTTCT 60.228 57.895 0.00 0.00 35.39 3.01
1865 2002 2.613506 CGCCCCGTTGGAGTTGTTC 61.614 63.158 0.00 0.00 35.39 3.18
1866 2003 2.593436 CGCCCCGTTGGAGTTGTT 60.593 61.111 0.00 0.00 35.39 2.83
1867 2004 3.552384 TCGCCCCGTTGGAGTTGT 61.552 61.111 0.00 0.00 35.07 3.32
1868 2005 3.047877 GTCGCCCCGTTGGAGTTG 61.048 66.667 0.00 0.00 35.07 3.16
1869 2006 4.324991 GGTCGCCCCGTTGGAGTT 62.325 66.667 0.00 0.00 35.07 3.01
1879 2016 1.077068 TGGATGAAATGGGTCGCCC 60.077 57.895 7.87 7.87 45.71 6.13
1880 2017 0.394352 AGTGGATGAAATGGGTCGCC 60.394 55.000 0.00 0.00 0.00 5.54
1881 2018 1.133025 CAAGTGGATGAAATGGGTCGC 59.867 52.381 0.00 0.00 0.00 5.19
1882 2019 1.133025 GCAAGTGGATGAAATGGGTCG 59.867 52.381 0.00 0.00 0.00 4.79
1883 2020 1.133025 CGCAAGTGGATGAAATGGGTC 59.867 52.381 0.00 0.00 0.00 4.46
1884 2021 1.176527 CGCAAGTGGATGAAATGGGT 58.823 50.000 0.00 0.00 0.00 4.51
1898 2035 3.323268 GCTGACCCAAACAGACGCAAG 62.323 57.143 0.00 0.00 37.54 4.01
1899 2036 1.444119 GCTGACCCAAACAGACGCAA 61.444 55.000 0.00 0.00 37.54 4.85
1900 2037 1.891919 GCTGACCCAAACAGACGCA 60.892 57.895 0.00 0.00 37.54 5.24
1901 2038 1.891919 TGCTGACCCAAACAGACGC 60.892 57.895 0.00 0.00 37.54 5.19
1902 2039 1.831389 CGTGCTGACCCAAACAGACG 61.831 60.000 0.00 0.00 37.54 4.18
1903 2040 1.507141 CCGTGCTGACCCAAACAGAC 61.507 60.000 0.00 0.00 37.54 3.51
1904 2041 1.227823 CCGTGCTGACCCAAACAGA 60.228 57.895 0.00 0.00 37.54 3.41
1905 2042 1.227823 TCCGTGCTGACCCAAACAG 60.228 57.895 0.00 0.00 38.27 3.16
1906 2043 1.525077 GTCCGTGCTGACCCAAACA 60.525 57.895 0.00 0.00 0.00 2.83
1907 2044 1.098712 TTGTCCGTGCTGACCCAAAC 61.099 55.000 0.00 0.00 34.25 2.93
1908 2045 0.394488 TTTGTCCGTGCTGACCCAAA 60.394 50.000 0.00 0.00 34.25 3.28
1909 2046 0.394488 TTTTGTCCGTGCTGACCCAA 60.394 50.000 0.00 0.00 34.25 4.12
1910 2047 0.817634 CTTTTGTCCGTGCTGACCCA 60.818 55.000 0.00 0.00 34.25 4.51
1911 2048 0.818040 ACTTTTGTCCGTGCTGACCC 60.818 55.000 0.00 0.00 34.25 4.46
1912 2049 1.798813 CTACTTTTGTCCGTGCTGACC 59.201 52.381 0.00 0.00 34.25 4.02
1913 2050 2.731976 CTCTACTTTTGTCCGTGCTGAC 59.268 50.000 0.00 0.00 35.77 3.51
1914 2051 2.288825 CCTCTACTTTTGTCCGTGCTGA 60.289 50.000 0.00 0.00 0.00 4.26
1915 2052 2.069273 CCTCTACTTTTGTCCGTGCTG 58.931 52.381 0.00 0.00 0.00 4.41
1916 2053 1.608283 GCCTCTACTTTTGTCCGTGCT 60.608 52.381 0.00 0.00 0.00 4.40
1917 2054 0.796927 GCCTCTACTTTTGTCCGTGC 59.203 55.000 0.00 0.00 0.00 5.34
1918 2055 1.068474 CGCCTCTACTTTTGTCCGTG 58.932 55.000 0.00 0.00 0.00 4.94
1919 2056 0.669625 GCGCCTCTACTTTTGTCCGT 60.670 55.000 0.00 0.00 0.00 4.69
1920 2057 0.669318 TGCGCCTCTACTTTTGTCCG 60.669 55.000 4.18 0.00 0.00 4.79
1921 2058 1.197036 GTTGCGCCTCTACTTTTGTCC 59.803 52.381 4.18 0.00 0.00 4.02
1922 2059 1.136336 CGTTGCGCCTCTACTTTTGTC 60.136 52.381 4.18 0.00 0.00 3.18
1923 2060 0.865769 CGTTGCGCCTCTACTTTTGT 59.134 50.000 4.18 0.00 0.00 2.83
1924 2061 0.865769 ACGTTGCGCCTCTACTTTTG 59.134 50.000 4.18 0.00 0.00 2.44
1925 2062 2.064014 GTACGTTGCGCCTCTACTTTT 58.936 47.619 4.18 0.00 0.00 2.27
1926 2063 1.670967 GGTACGTTGCGCCTCTACTTT 60.671 52.381 4.18 0.00 0.00 2.66
1927 2064 0.108945 GGTACGTTGCGCCTCTACTT 60.109 55.000 4.18 0.00 0.00 2.24
1928 2065 1.509923 GGTACGTTGCGCCTCTACT 59.490 57.895 4.18 0.00 0.00 2.57
1929 2066 4.083746 GGTACGTTGCGCCTCTAC 57.916 61.111 4.18 0.00 0.00 2.59
1942 2079 1.814394 GATTTGGGTTTGGGTCGGTAC 59.186 52.381 0.00 0.00 0.00 3.34
1943 2080 1.611148 CGATTTGGGTTTGGGTCGGTA 60.611 52.381 0.00 0.00 0.00 4.02
1944 2081 0.891904 CGATTTGGGTTTGGGTCGGT 60.892 55.000 0.00 0.00 0.00 4.69
1945 2082 1.880186 CGATTTGGGTTTGGGTCGG 59.120 57.895 0.00 0.00 0.00 4.79
1946 2083 1.211709 GCGATTTGGGTTTGGGTCG 59.788 57.895 0.00 0.00 0.00 4.79
1947 2084 0.894835 ATGCGATTTGGGTTTGGGTC 59.105 50.000 0.00 0.00 0.00 4.46
1948 2085 1.275010 GAATGCGATTTGGGTTTGGGT 59.725 47.619 0.00 0.00 0.00 4.51
1949 2086 1.735369 CGAATGCGATTTGGGTTTGGG 60.735 52.381 0.00 0.00 40.82 4.12
1950 2087 1.627879 CGAATGCGATTTGGGTTTGG 58.372 50.000 0.00 0.00 40.82 3.28
1951 2088 0.991344 GCGAATGCGATTTGGGTTTG 59.009 50.000 0.00 0.00 40.82 2.93
1952 2089 3.416955 GCGAATGCGATTTGGGTTT 57.583 47.368 0.00 0.00 40.82 3.27
1972 2109 2.186350 TTCGGCTGCAAATGCGTCAG 62.186 55.000 0.50 0.00 45.83 3.51
1973 2110 1.790090 TTTCGGCTGCAAATGCGTCA 61.790 50.000 0.50 0.00 45.83 4.35
1974 2111 0.456653 ATTTCGGCTGCAAATGCGTC 60.457 50.000 0.50 0.00 45.83 5.19
1975 2112 0.733566 CATTTCGGCTGCAAATGCGT 60.734 50.000 11.08 0.00 45.83 5.24
1976 2113 1.992947 CATTTCGGCTGCAAATGCG 59.007 52.632 11.08 1.40 45.83 4.73
1978 2115 0.733566 ACGCATTTCGGCTGCAAATG 60.734 50.000 16.68 16.68 42.05 2.32
1979 2116 0.456653 GACGCATTTCGGCTGCAAAT 60.457 50.000 0.50 0.00 44.55 2.32
1980 2117 1.081509 GACGCATTTCGGCTGCAAA 60.082 52.632 0.50 0.00 44.55 3.68
1981 2118 2.560861 GACGCATTTCGGCTGCAA 59.439 55.556 0.50 0.00 44.55 4.08
1982 2119 3.787676 CGACGCATTTCGGCTGCA 61.788 61.111 0.50 0.00 46.15 4.41
2055 2192 0.109412 GTAGTTGGACGACCGTCAGG 60.109 60.000 21.79 0.00 46.20 3.86
2056 2193 0.109412 GGTAGTTGGACGACCGTCAG 60.109 60.000 21.79 0.00 46.20 3.51
2057 2194 1.526575 GGGTAGTTGGACGACCGTCA 61.527 60.000 21.79 7.54 43.67 4.35
2058 2195 1.213799 GGGTAGTTGGACGACCGTC 59.786 63.158 13.56 13.56 43.67 4.79
2059 2196 1.530013 CTGGGTAGTTGGACGACCGT 61.530 60.000 0.00 0.00 43.67 4.83
2060 2197 1.214589 CTGGGTAGTTGGACGACCG 59.785 63.158 0.00 0.00 43.67 4.79
2061 2198 1.079336 GCTGGGTAGTTGGACGACC 60.079 63.158 0.00 0.00 42.27 4.79
2062 2199 1.445582 CGCTGGGTAGTTGGACGAC 60.446 63.158 0.00 0.00 0.00 4.34
2063 2200 2.642254 CCGCTGGGTAGTTGGACGA 61.642 63.158 0.00 0.00 0.00 4.20
2064 2201 2.125673 CCGCTGGGTAGTTGGACG 60.126 66.667 0.00 0.00 0.00 4.79
2065 2202 2.436115 GCCGCTGGGTAGTTGGAC 60.436 66.667 0.00 0.00 34.97 4.02
2066 2203 3.712907 GGCCGCTGGGTAGTTGGA 61.713 66.667 0.00 0.00 34.97 3.53
2067 2204 3.976701 CTGGCCGCTGGGTAGTTGG 62.977 68.421 0.00 0.00 34.97 3.77
2068 2205 1.895020 TACTGGCCGCTGGGTAGTTG 61.895 60.000 0.00 0.00 35.45 3.16
2069 2206 0.981277 ATACTGGCCGCTGGGTAGTT 60.981 55.000 0.00 0.00 35.45 2.24
2070 2207 1.382695 ATACTGGCCGCTGGGTAGT 60.383 57.895 0.00 0.00 36.95 2.73
2071 2208 1.069765 CATACTGGCCGCTGGGTAG 59.930 63.158 0.00 0.00 34.97 3.18
2072 2209 2.439960 CCATACTGGCCGCTGGGTA 61.440 63.158 0.00 0.00 34.97 3.69
2073 2210 3.797353 CCATACTGGCCGCTGGGT 61.797 66.667 0.00 0.00 34.97 4.51
2074 2211 3.757248 GACCATACTGGCCGCTGGG 62.757 68.421 14.84 7.91 42.67 4.45
2075 2212 2.203070 GACCATACTGGCCGCTGG 60.203 66.667 10.25 10.25 42.67 4.85
2076 2213 1.522355 CTGACCATACTGGCCGCTG 60.522 63.158 0.00 0.00 42.67 5.18
2077 2214 2.903357 CTGACCATACTGGCCGCT 59.097 61.111 0.00 0.00 42.67 5.52
2078 2215 2.876368 AAGCTGACCATACTGGCCGC 62.876 60.000 0.00 0.00 42.67 6.53
2079 2216 0.464036 TAAGCTGACCATACTGGCCG 59.536 55.000 0.00 0.00 42.67 6.13
2080 2217 2.710096 TTAAGCTGACCATACTGGCC 57.290 50.000 0.00 0.00 42.67 5.36
2081 2218 6.486657 TCATAAATTAAGCTGACCATACTGGC 59.513 38.462 0.00 0.00 42.67 4.85
2082 2219 7.498900 TGTCATAAATTAAGCTGACCATACTGG 59.501 37.037 0.00 0.00 45.02 4.00
2083 2220 8.437360 TGTCATAAATTAAGCTGACCATACTG 57.563 34.615 0.00 0.00 37.74 2.74
2084 2221 8.893727 GTTGTCATAAATTAAGCTGACCATACT 58.106 33.333 0.00 0.00 37.74 2.12
2085 2222 8.893727 AGTTGTCATAAATTAAGCTGACCATAC 58.106 33.333 0.00 1.05 37.74 2.39
2086 2223 8.892723 CAGTTGTCATAAATTAAGCTGACCATA 58.107 33.333 0.00 0.00 37.74 2.74
2087 2224 7.629222 GCAGTTGTCATAAATTAAGCTGACCAT 60.629 37.037 0.00 0.00 37.74 3.55
2088 2225 6.349280 GCAGTTGTCATAAATTAAGCTGACCA 60.349 38.462 0.00 0.00 37.74 4.02
2089 2226 6.030228 GCAGTTGTCATAAATTAAGCTGACC 58.970 40.000 0.00 0.00 37.74 4.02
2090 2227 6.030228 GGCAGTTGTCATAAATTAAGCTGAC 58.970 40.000 0.00 0.00 38.74 3.51
2091 2228 5.125417 GGGCAGTTGTCATAAATTAAGCTGA 59.875 40.000 0.00 0.00 0.00 4.26
2092 2229 5.105797 TGGGCAGTTGTCATAAATTAAGCTG 60.106 40.000 0.00 0.00 0.00 4.24
2093 2230 5.016173 TGGGCAGTTGTCATAAATTAAGCT 58.984 37.500 0.00 0.00 0.00 3.74
2094 2231 5.102313 GTGGGCAGTTGTCATAAATTAAGC 58.898 41.667 0.00 0.00 0.00 3.09
2095 2232 5.418840 AGGTGGGCAGTTGTCATAAATTAAG 59.581 40.000 0.00 0.00 0.00 1.85
2096 2233 5.329399 AGGTGGGCAGTTGTCATAAATTAA 58.671 37.500 0.00 0.00 0.00 1.40
2097 2234 4.929479 AGGTGGGCAGTTGTCATAAATTA 58.071 39.130 0.00 0.00 0.00 1.40
2098 2235 3.763897 GAGGTGGGCAGTTGTCATAAATT 59.236 43.478 0.00 0.00 0.00 1.82
2099 2236 3.245229 TGAGGTGGGCAGTTGTCATAAAT 60.245 43.478 0.00 0.00 0.00 1.40
2100 2237 2.107378 TGAGGTGGGCAGTTGTCATAAA 59.893 45.455 0.00 0.00 0.00 1.40
2101 2238 1.702401 TGAGGTGGGCAGTTGTCATAA 59.298 47.619 0.00 0.00 0.00 1.90
2102 2239 1.278985 CTGAGGTGGGCAGTTGTCATA 59.721 52.381 0.00 0.00 0.00 2.15
2103 2240 0.037303 CTGAGGTGGGCAGTTGTCAT 59.963 55.000 0.00 0.00 0.00 3.06
2104 2241 1.451504 CTGAGGTGGGCAGTTGTCA 59.548 57.895 0.00 0.00 0.00 3.58
2105 2242 1.302832 CCTGAGGTGGGCAGTTGTC 60.303 63.158 0.00 0.00 0.00 3.18
2106 2243 2.839098 CCTGAGGTGGGCAGTTGT 59.161 61.111 0.00 0.00 0.00 3.32
2113 2250 4.351054 GTGTGGGCCTGAGGTGGG 62.351 72.222 4.53 0.00 0.00 4.61
2114 2251 4.704833 CGTGTGGGCCTGAGGTGG 62.705 72.222 4.53 0.00 0.00 4.61
2115 2252 3.883744 GACGTGTGGGCCTGAGGTG 62.884 68.421 4.53 0.00 0.00 4.00
2116 2253 3.626924 GACGTGTGGGCCTGAGGT 61.627 66.667 4.53 2.45 0.00 3.85
2117 2254 3.596066 CTGACGTGTGGGCCTGAGG 62.596 68.421 4.53 0.00 0.00 3.86
2118 2255 2.047844 CTGACGTGTGGGCCTGAG 60.048 66.667 4.53 0.00 0.00 3.35
2119 2256 4.314440 GCTGACGTGTGGGCCTGA 62.314 66.667 4.53 0.00 0.00 3.86
2120 2257 4.624364 TGCTGACGTGTGGGCCTG 62.624 66.667 4.53 0.00 0.00 4.85
2121 2258 3.872603 TTGCTGACGTGTGGGCCT 61.873 61.111 4.53 0.00 0.00 5.19
2122 2259 3.660111 GTTGCTGACGTGTGGGCC 61.660 66.667 0.00 0.00 0.00 5.80
2123 2260 4.012895 CGTTGCTGACGTGTGGGC 62.013 66.667 0.00 0.00 46.49 5.36
2131 2268 3.103911 CGACCCGTCGTTGCTGAC 61.104 66.667 9.06 0.00 46.99 3.51
2153 2290 0.860533 CCGCACGGTCGACTTAAAAA 59.139 50.000 16.46 0.00 0.00 1.94
2154 2291 0.945265 CCCGCACGGTCGACTTAAAA 60.945 55.000 16.46 0.00 0.00 1.52
2155 2292 1.373246 CCCGCACGGTCGACTTAAA 60.373 57.895 16.46 0.00 0.00 1.52
2156 2293 2.203972 CTCCCGCACGGTCGACTTAA 62.204 60.000 16.46 0.00 0.00 1.85
2157 2294 2.672651 TCCCGCACGGTCGACTTA 60.673 61.111 16.46 0.00 0.00 2.24
2158 2295 4.052229 CTCCCGCACGGTCGACTT 62.052 66.667 16.46 0.00 0.00 3.01
2176 2313 3.537874 CGGATGAGGACGACCCCC 61.538 72.222 0.00 0.00 36.73 5.40
2177 2314 4.222847 GCGGATGAGGACGACCCC 62.223 72.222 0.00 0.00 36.73 4.95
2178 2315 2.630592 GAAGCGGATGAGGACGACCC 62.631 65.000 0.00 0.00 36.73 4.46
2179 2316 1.227002 GAAGCGGATGAGGACGACC 60.227 63.158 0.00 0.00 0.00 4.79
2180 2317 1.227002 GGAAGCGGATGAGGACGAC 60.227 63.158 0.00 0.00 0.00 4.34
2181 2318 1.254975 TTGGAAGCGGATGAGGACGA 61.255 55.000 0.00 0.00 0.00 4.20
2182 2319 0.391130 TTTGGAAGCGGATGAGGACG 60.391 55.000 0.00 0.00 0.00 4.79
2183 2320 1.066143 TCTTTGGAAGCGGATGAGGAC 60.066 52.381 0.00 0.00 0.00 3.85
2184 2321 1.275666 TCTTTGGAAGCGGATGAGGA 58.724 50.000 0.00 0.00 0.00 3.71
2185 2322 2.113860 TTCTTTGGAAGCGGATGAGG 57.886 50.000 0.00 0.00 0.00 3.86
2186 2323 3.077359 AGTTTCTTTGGAAGCGGATGAG 58.923 45.455 0.00 0.00 37.66 2.90
2187 2324 3.074412 GAGTTTCTTTGGAAGCGGATGA 58.926 45.455 0.00 0.00 37.66 2.92
2188 2325 2.162408 GGAGTTTCTTTGGAAGCGGATG 59.838 50.000 0.00 0.00 37.66 3.51
2189 2326 2.437413 GGAGTTTCTTTGGAAGCGGAT 58.563 47.619 0.00 0.00 37.66 4.18
2190 2327 1.544759 GGGAGTTTCTTTGGAAGCGGA 60.545 52.381 0.00 0.00 37.66 5.54
2191 2328 0.881796 GGGAGTTTCTTTGGAAGCGG 59.118 55.000 0.00 0.00 37.66 5.52
2192 2329 0.881796 GGGGAGTTTCTTTGGAAGCG 59.118 55.000 0.00 0.00 37.66 4.68
2193 2330 0.881796 CGGGGAGTTTCTTTGGAAGC 59.118 55.000 0.00 0.00 33.71 3.86
2194 2331 2.152016 GACGGGGAGTTTCTTTGGAAG 58.848 52.381 0.00 0.00 32.61 3.46
2195 2332 1.202842 GGACGGGGAGTTTCTTTGGAA 60.203 52.381 0.00 0.00 0.00 3.53
2196 2333 0.399075 GGACGGGGAGTTTCTTTGGA 59.601 55.000 0.00 0.00 0.00 3.53
2197 2334 0.608308 GGGACGGGGAGTTTCTTTGG 60.608 60.000 0.00 0.00 0.00 3.28
2198 2335 0.608308 GGGGACGGGGAGTTTCTTTG 60.608 60.000 0.00 0.00 0.00 2.77
2199 2336 1.063654 TGGGGACGGGGAGTTTCTTT 61.064 55.000 0.00 0.00 0.00 2.52
2200 2337 0.845102 ATGGGGACGGGGAGTTTCTT 60.845 55.000 0.00 0.00 0.00 2.52
2201 2338 1.229853 ATGGGGACGGGGAGTTTCT 60.230 57.895 0.00 0.00 0.00 2.52
2202 2339 1.223763 GATGGGGACGGGGAGTTTC 59.776 63.158 0.00 0.00 0.00 2.78
2203 2340 1.229853 AGATGGGGACGGGGAGTTT 60.230 57.895 0.00 0.00 0.00 2.66
2204 2341 1.689582 GAGATGGGGACGGGGAGTT 60.690 63.158 0.00 0.00 0.00 3.01
2205 2342 2.041819 GAGATGGGGACGGGGAGT 60.042 66.667 0.00 0.00 0.00 3.85
2206 2343 3.227276 CGAGATGGGGACGGGGAG 61.227 72.222 0.00 0.00 0.00 4.30
2209 2346 3.917760 GAGCGAGATGGGGACGGG 61.918 72.222 0.00 0.00 0.00 5.28
2210 2347 3.917760 GGAGCGAGATGGGGACGG 61.918 72.222 0.00 0.00 0.00 4.79
2211 2348 3.917760 GGGAGCGAGATGGGGACG 61.918 72.222 0.00 0.00 0.00 4.79
2212 2349 3.551407 GGGGAGCGAGATGGGGAC 61.551 72.222 0.00 0.00 0.00 4.46
2213 2350 4.880426 GGGGGAGCGAGATGGGGA 62.880 72.222 0.00 0.00 0.00 4.81
2215 2352 2.851102 ATGGGGGAGCGAGATGGG 60.851 66.667 0.00 0.00 0.00 4.00
2216 2353 2.746359 GATGGGGGAGCGAGATGG 59.254 66.667 0.00 0.00 0.00 3.51
2217 2354 2.341543 CGATGGGGGAGCGAGATG 59.658 66.667 0.00 0.00 34.57 2.90
2218 2355 2.919856 CCGATGGGGGAGCGAGAT 60.920 66.667 0.00 0.00 34.57 2.75
2228 2365 2.644555 CTAGGGTTGTCGCCGATGGG 62.645 65.000 0.00 0.00 0.00 4.00
2229 2366 1.227263 CTAGGGTTGTCGCCGATGG 60.227 63.158 0.00 0.00 0.00 3.51
2230 2367 1.883084 GCTAGGGTTGTCGCCGATG 60.883 63.158 0.00 0.00 0.00 3.84
2231 2368 2.499685 GCTAGGGTTGTCGCCGAT 59.500 61.111 0.00 0.00 0.00 4.18
2232 2369 3.766691 GGCTAGGGTTGTCGCCGA 61.767 66.667 0.00 0.00 32.22 5.54
2233 2370 4.077184 TGGCTAGGGTTGTCGCCG 62.077 66.667 0.00 0.00 45.36 6.46
2234 2371 2.436115 GTGGCTAGGGTTGTCGCC 60.436 66.667 0.00 0.00 42.78 5.54
2235 2372 2.436115 GGTGGCTAGGGTTGTCGC 60.436 66.667 0.00 0.00 0.00 5.19
2236 2373 0.974010 TAGGGTGGCTAGGGTTGTCG 60.974 60.000 0.00 0.00 0.00 4.35
2237 2374 0.831307 CTAGGGTGGCTAGGGTTGTC 59.169 60.000 0.00 0.00 0.00 3.18
2238 2375 0.118547 ACTAGGGTGGCTAGGGTTGT 59.881 55.000 0.00 0.00 0.00 3.32
2239 2376 0.831307 GACTAGGGTGGCTAGGGTTG 59.169 60.000 0.00 0.00 0.00 3.77
2240 2377 0.416231 TGACTAGGGTGGCTAGGGTT 59.584 55.000 0.00 0.00 0.00 4.11
2241 2378 0.416231 TTGACTAGGGTGGCTAGGGT 59.584 55.000 0.00 0.00 0.00 4.34
2242 2379 1.123928 CTTGACTAGGGTGGCTAGGG 58.876 60.000 0.00 0.00 0.00 3.53
2243 2380 0.466124 GCTTGACTAGGGTGGCTAGG 59.534 60.000 0.00 0.00 0.00 3.02
2244 2381 0.466124 GGCTTGACTAGGGTGGCTAG 59.534 60.000 0.00 0.00 0.00 3.42
2245 2382 0.252513 TGGCTTGACTAGGGTGGCTA 60.253 55.000 0.00 0.00 0.00 3.93
2246 2383 1.538876 TGGCTTGACTAGGGTGGCT 60.539 57.895 0.00 0.00 0.00 4.75
2247 2384 1.078143 CTGGCTTGACTAGGGTGGC 60.078 63.158 0.00 0.00 0.00 5.01
2248 2385 1.134280 CATCTGGCTTGACTAGGGTGG 60.134 57.143 0.00 0.00 0.00 4.61
2249 2386 1.134280 CCATCTGGCTTGACTAGGGTG 60.134 57.143 0.00 0.00 0.00 4.61
2250 2387 1.207791 CCATCTGGCTTGACTAGGGT 58.792 55.000 0.00 0.00 0.00 4.34
2251 2388 0.471617 CCCATCTGGCTTGACTAGGG 59.528 60.000 0.00 0.00 0.00 3.53
2262 2399 1.445095 CGGAGAAGAGCCCATCTGG 59.555 63.158 0.00 0.00 38.67 3.86
2263 2400 1.445095 CCGGAGAAGAGCCCATCTG 59.555 63.158 0.00 0.00 38.67 2.90
2264 2401 2.439104 GCCGGAGAAGAGCCCATCT 61.439 63.158 5.05 0.00 41.27 2.90
2265 2402 2.049627 ATGCCGGAGAAGAGCCCATC 62.050 60.000 5.05 0.00 0.00 3.51
2266 2403 1.639635 AATGCCGGAGAAGAGCCCAT 61.640 55.000 5.05 0.00 0.00 4.00
2267 2404 2.300967 AATGCCGGAGAAGAGCCCA 61.301 57.895 5.05 0.00 0.00 5.36
2268 2405 1.821332 CAATGCCGGAGAAGAGCCC 60.821 63.158 5.05 0.00 0.00 5.19
2269 2406 1.221840 TCAATGCCGGAGAAGAGCC 59.778 57.895 5.05 0.00 0.00 4.70
2270 2407 4.941609 TCAATGCCGGAGAAGAGC 57.058 55.556 5.05 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.