AutoCloner

Multiple sequence alignment - TraesCS3A01G348600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3A01G348600	chr3A	100.000	3660	0	0	1	3660	597265896	597269555	0.000000e+00	6759.0
1	TraesCS3A01G348600	chr3A	82.781	151	15	7	1423	1562	47024	47174	1.380000e-24	124.0
2	TraesCS3A01G348600	chr3A	80.612	98	14	5	86	179	72673976	72674072	1.820000e-08	71.3
3	TraesCS3A01G348600	chr3D	92.301	1104	67	8	1576	2663	455011911	455013012	0.000000e+00	1552.0
4	TraesCS3A01G348600	chr3D	90.131	1145	76	12	2521	3660	455043153	455044265	0.000000e+00	1454.0
5	TraesCS3A01G348600	chr3D	89.733	974	64	21	468	1423	455010947	455011902	0.000000e+00	1212.0
6	TraesCS3A01G348600	chr3D	86.842	456	50	2	964	1410	455042489	455042943	5.460000e-138	501.0
7	TraesCS3A01G348600	chr3D	79.082	392	73	7	86	472	21707540	21707153	1.010000e-65	261.0
8	TraesCS3A01G348600	chr3D	87.864	206	19	3	1576	1781	455042958	455043157	1.700000e-58	237.0
9	TraesCS3A01G348600	chr3D	84.667	150	11	8	1423	1561	260996594	260996446	4.930000e-29	139.0
10	TraesCS3A01G348600	chr3D	76.875	160	24	5	1423	1570	223203769	223203927	1.090000e-10	78.7
11	TraesCS3A01G348600	chr3B	90.746	1113	59	18	1576	2664	598111650	598112742	0.000000e+00	1445.0
12	TraesCS3A01G348600	chr3B	90.383	915	74	7	2209	3116	598117560	598118467	0.000000e+00	1190.0
13	TraesCS3A01G348600	chr3B	89.494	790	41	13	645	1411	598110864	598111634	0.000000e+00	961.0
14	TraesCS3A01G348600	chr3B	92.239	451	32	3	3211	3659	598118658	598119107	1.430000e-178	636.0
15	TraesCS3A01G348600	chr3B	87.751	449	35	4	964	1403	598116478	598116915	1.170000e-139	507.0
16	TraesCS3A01G348600	chr3B	91.197	284	22	2	1577	1860	598116940	598117220	2.060000e-102	383.0
17	TraesCS3A01G348600	chr3B	91.623	191	15	1	1912	2101	598117321	598117511	2.800000e-66	263.0
18	TraesCS3A01G348600	chr2A	84.158	303	43	4	169	468	16355294	16355594	4.620000e-74	289.0
19	TraesCS3A01G348600	chr2A	78.682	258	49	4	218	471	686837999	686837744	2.260000e-37	167.0
20	TraesCS3A01G348600	chrUn	81.518	303	50	6	169	469	280421644	280421942	1.020000e-60	244.0
21	TraesCS3A01G348600	chrUn	81.518	303	50	6	169	469	280428657	280428955	1.020000e-60	244.0
22	TraesCS3A01G348600	chrUn	81.518	303	50	5	169	469	333170008	333169710	1.020000e-60	244.0
23	TraesCS3A01G348600	chrUn	82.781	151	15	7	1423	1562	388800390	388800540	1.380000e-24	124.0
24	TraesCS3A01G348600	chr2D	81.250	304	50	5	169	469	61788934	61788635	4.720000e-59	239.0
25	TraesCS3A01G348600	chr5B	80.357	280	52	2	190	468	674384915	674385192	3.700000e-50	209.0
26	TraesCS3A01G348600	chr1D	79.787	282	46	11	169	445	422672145	422671870	1.040000e-45	195.0
27	TraesCS3A01G348600	chr1D	80.921	152	17	7	1423	1562	143951192	143951041	3.860000e-20	110.0
28	TraesCS3A01G348600	chr1D	90.000	60	3	3	127	183	251990650	251990591	1.410000e-09	75.0
29	TraesCS3A01G348600	chr7A	80.087	231	40	5	83	309	93081269	93081497	2.260000e-37	167.0
30	TraesCS3A01G348600	chr7A	82.781	151	15	7	1423	1562	34031214	34031364	1.380000e-24	124.0
31	TraesCS3A01G348600	chr7A	80.921	152	17	8	1423	1562	611964835	611964684	3.860000e-20	110.0
32	TraesCS3A01G348600	chr6D	82.119	151	13	9	1423	1560	326567058	326566909	2.310000e-22	117.0
33	TraesCS3A01G348600	chr6D	100.000	28	0	0	1368	1395	411488240	411488213	7.000000e-03	52.8
34	TraesCS3A01G348600	chr4A	81.081	148	15	11	1423	1559	511823462	511823607	5.000000e-19	106.0
35	TraesCS3A01G348600	chr2B	78.667	150	21	10	86	227	142749060	142748914	5.030000e-14	89.8
36	TraesCS3A01G348600	chr2B	78.302	106	20	3	91	194	44908560	44908456	8.480000e-07	65.8
37	TraesCS3A01G348600	chr6B	80.172	116	15	8	84	194	593942980	593942868	3.030000e-11	80.5
38	TraesCS3A01G348600	chr7B	87.143	70	6	3	127	194	602412612	602412680	3.920000e-10	76.8
39	TraesCS3A01G348600	chr4D	80.374	107	14	6	93	194	484559781	484559885	1.410000e-09	75.0
40	TraesCS3A01G348600	chr6A	100.000	28	0	0	1368	1395	556086303	556086276	7.000000e-03	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3A01G348600	chr3A	597265896	597269555	3659	False	6759.000000	6759	100.000000	1	3660	1	chr3A.!!$F3	3659
1	TraesCS3A01G348600	chr3D	455010947	455013012	2065	False	1382.000000	1552	91.017000	468	2663	2	chr3D.!!$F2	2195
2	TraesCS3A01G348600	chr3D	455042489	455044265	1776	False	730.666667	1454	88.279000	964	3660	3	chr3D.!!$F3	2696
3	TraesCS3A01G348600	chr3B	598110864	598119107	8243	False	769.285714	1445	90.490429	645	3659	7	chr3B.!!$F1	3014

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
320	321	0.033781	TTACGGTAAGGCGTGCAACT	59.966	50.0	0.0	31.75	3.16	F
334	335	0.036294	GCAACTCTACCACCAGGGAC	60.036	60.0	0.0	41.15	4.46	F
660	663	0.107456	ATGGCTGCAATCTACTCGGG	59.893	55.0	0.5	0.00	5.14	F
1152	1188	0.243095	GTACGTTTCGTGCCTCCTCT	59.757	55.0	0.0	41.39	3.69	F
1164	1200	0.478507	CCTCCTCTCCTCCTCCTCTC	59.521	65.0	0.0	0.00	3.20	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1171	1207	0.171903	CGACCCGATTCAGTTACGGT	59.828	55.000	0.00	0.00	44.34	4.83	R
1655	1697	0.520619	CTCGTTCTGCGTCGATCGAA	60.521	55.000	21.31	3.23	42.86	3.71	R
2573	2641	0.724549	CGAACGCCCAAATCGATCAA	59.275	50.000	0.00	0.00	38.82	2.57	R
2581	2649	1.728672	GGTGAAACGAACGCCCAAA	59.271	52.632	0.00	0.00	38.12	3.28	R
2724	8060	2.283298	CGGCAGTTCATACAGCAGAAT	58.717	47.619	0.00	0.00	38.43	2.40	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
23	24	6.719915	TTTAACAAAGTTATCGCAACAACG	57.280	33.333	3.11	0.00	0.00	4.10
24	25	2.646250	ACAAAGTTATCGCAACAACGC	58.354	42.857	3.11	0.00	0.00	4.84
25	26	2.032302	ACAAAGTTATCGCAACAACGCA	59.968	40.909	3.11	0.00	0.00	5.24
26	27	2.309898	AAGTTATCGCAACAACGCAC	57.690	45.000	3.11	0.00	0.00	5.34
27	28	0.162933	AGTTATCGCAACAACGCACG	59.837	50.000	3.11	0.00	0.00	5.34
28	29	0.162082	GTTATCGCAACAACGCACGA	59.838	50.000	0.00	0.00	39.11	4.35
29	30	0.859882	TTATCGCAACAACGCACGAA	59.140	45.000	0.00	0.00	38.15	3.85
30	31	0.436913	TATCGCAACAACGCACGAAG	59.563	50.000	0.00	0.00	38.15	3.79
31	32	1.218875	ATCGCAACAACGCACGAAGA	61.219	50.000	0.00	0.00	38.15	2.87
32	33	1.011684	CGCAACAACGCACGAAGAA	60.012	52.632	0.00	0.00	0.00	2.52
33	34	0.384230	CGCAACAACGCACGAAGAAT	60.384	50.000	0.00	0.00	0.00	2.40
34	35	1.318251	GCAACAACGCACGAAGAATC	58.682	50.000	0.00	0.00	0.00	2.52
35	36	1.333702	GCAACAACGCACGAAGAATCA	60.334	47.619	0.00	0.00	0.00	2.57
36	37	2.665519	GCAACAACGCACGAAGAATCAT	60.666	45.455	0.00	0.00	0.00	2.45
37	38	3.155998	CAACAACGCACGAAGAATCATC	58.844	45.455	0.00	0.00	0.00	2.92
38	39	1.732259	ACAACGCACGAAGAATCATCC	59.268	47.619	0.00	0.00	0.00	3.51
39	40	1.731709	CAACGCACGAAGAATCATCCA	59.268	47.619	0.00	0.00	0.00	3.41
40	41	1.645034	ACGCACGAAGAATCATCCAG	58.355	50.000	0.00	0.00	0.00	3.86
41	42	0.933097	CGCACGAAGAATCATCCAGG	59.067	55.000	0.00	0.00	0.00	4.45
42	43	1.740380	CGCACGAAGAATCATCCAGGT	60.740	52.381	0.00	0.00	0.00	4.00
43	44	2.359900	GCACGAAGAATCATCCAGGTT	58.640	47.619	0.00	0.00	0.00	3.50
44	45	3.531538	GCACGAAGAATCATCCAGGTTA	58.468	45.455	0.00	0.00	0.00	2.85
45	46	4.130118	GCACGAAGAATCATCCAGGTTAT	58.870	43.478	0.00	0.00	0.00	1.89
46	47	4.212214	GCACGAAGAATCATCCAGGTTATC	59.788	45.833	0.00	0.00	0.00	1.75
47	48	5.359756	CACGAAGAATCATCCAGGTTATCA	58.640	41.667	0.00	0.00	0.00	2.15
48	49	5.817296	CACGAAGAATCATCCAGGTTATCAA	59.183	40.000	0.00	0.00	0.00	2.57
49	50	6.316140	CACGAAGAATCATCCAGGTTATCAAA	59.684	38.462	0.00	0.00	0.00	2.69
50	51	7.012704	CACGAAGAATCATCCAGGTTATCAAAT	59.987	37.037	0.00	0.00	0.00	2.32
51	52	7.012704	ACGAAGAATCATCCAGGTTATCAAATG	59.987	37.037	0.00	0.00	0.00	2.32
52	53	6.645790	AGAATCATCCAGGTTATCAAATGC	57.354	37.500	0.00	0.00	0.00	3.56
53	54	6.371278	AGAATCATCCAGGTTATCAAATGCT	58.629	36.000	0.00	0.00	0.00	3.79
54	55	6.264744	AGAATCATCCAGGTTATCAAATGCTG	59.735	38.462	0.00	0.00	0.00	4.41
55	56	3.633525	TCATCCAGGTTATCAAATGCTGC	59.366	43.478	0.00	0.00	0.00	5.25
56	57	2.378038	TCCAGGTTATCAAATGCTGCC	58.622	47.619	0.00	0.00	0.00	4.85
57	58	2.025037	TCCAGGTTATCAAATGCTGCCT	60.025	45.455	0.00	0.00	0.00	4.75
58	59	2.360165	CCAGGTTATCAAATGCTGCCTC	59.640	50.000	0.00	0.00	0.00	4.70
59	60	3.285484	CAGGTTATCAAATGCTGCCTCT	58.715	45.455	0.00	0.00	0.00	3.69
60	61	3.066342	CAGGTTATCAAATGCTGCCTCTG	59.934	47.826	0.00	0.00	0.00	3.35
61	62	2.223665	GGTTATCAAATGCTGCCTCTGC	60.224	50.000	0.00	0.00	38.26	4.26
62	63	1.683943	TATCAAATGCTGCCTCTGCC	58.316	50.000	0.00	0.00	36.33	4.85
63	64	0.323999	ATCAAATGCTGCCTCTGCCA	60.324	50.000	0.00	0.00	36.33	4.92
64	65	1.214589	CAAATGCTGCCTCTGCCAC	59.785	57.895	0.00	0.00	36.33	5.01
65	66	1.076192	AAATGCTGCCTCTGCCACT	59.924	52.632	0.00	0.00	36.33	4.00
66	67	1.248785	AAATGCTGCCTCTGCCACTG	61.249	55.000	0.00	0.00	36.33	3.66
67	68	2.421923	AATGCTGCCTCTGCCACTGT	62.422	55.000	0.00	0.00	36.33	3.55
68	69	2.282040	GCTGCCTCTGCCACTGTT	60.282	61.111	0.00	0.00	36.33	3.16
69	70	1.003355	GCTGCCTCTGCCACTGTTA	60.003	57.895	0.00	0.00	36.33	2.41
70	71	1.301677	GCTGCCTCTGCCACTGTTAC	61.302	60.000	0.00	0.00	36.33	2.50
71	72	0.035317	CTGCCTCTGCCACTGTTACA	59.965	55.000	0.00	0.00	36.33	2.41
72	73	0.250295	TGCCTCTGCCACTGTTACAC	60.250	55.000	0.00	0.00	36.33	2.90
73	74	0.955919	GCCTCTGCCACTGTTACACC	60.956	60.000	0.00	0.00	0.00	4.16
74	75	0.396435	CCTCTGCCACTGTTACACCA	59.604	55.000	0.00	0.00	0.00	4.17
75	76	1.512926	CTCTGCCACTGTTACACCAC	58.487	55.000	0.00	0.00	0.00	4.16
76	77	0.107831	TCTGCCACTGTTACACCACC	59.892	55.000	0.00	0.00	0.00	4.61
77	78	0.889186	CTGCCACTGTTACACCACCC	60.889	60.000	0.00	0.00	0.00	4.61
78	79	1.349542	TGCCACTGTTACACCACCCT	61.350	55.000	0.00	0.00	0.00	4.34
79	80	0.179001	GCCACTGTTACACCACCCTT	60.179	55.000	0.00	0.00	0.00	3.95
80	81	1.892209	CCACTGTTACACCACCCTTC	58.108	55.000	0.00	0.00	0.00	3.46
81	82	1.420138	CCACTGTTACACCACCCTTCT	59.580	52.381	0.00	0.00	0.00	2.85
82	83	2.158667	CCACTGTTACACCACCCTTCTT	60.159	50.000	0.00	0.00	0.00	2.52
83	84	2.878406	CACTGTTACACCACCCTTCTTG	59.122	50.000	0.00	0.00	0.00	3.02
84	85	2.508300	ACTGTTACACCACCCTTCTTGT	59.492	45.455	0.00	0.00	0.00	3.16
85	86	2.878406	CTGTTACACCACCCTTCTTGTG	59.122	50.000	0.00	0.00	34.92	3.33
89	90	4.597032	CCACCCTTCTTGTGGCAA	57.403	55.556	0.00	0.00	46.13	4.52
90	91	2.819477	CCACCCTTCTTGTGGCAAA	58.181	52.632	0.00	0.00	46.13	3.68
91	92	1.118838	CCACCCTTCTTGTGGCAAAA	58.881	50.000	0.00	0.00	46.13	2.44
92	93	1.693606	CCACCCTTCTTGTGGCAAAAT	59.306	47.619	0.00	0.00	46.13	1.82
93	94	2.104622	CCACCCTTCTTGTGGCAAAATT	59.895	45.455	0.00	0.00	46.13	1.82
94	95	3.433456	CCACCCTTCTTGTGGCAAAATTT	60.433	43.478	0.00	0.00	46.13	1.82
95	96	4.198530	CACCCTTCTTGTGGCAAAATTTT	58.801	39.130	0.00	0.00	0.00	1.82
96	97	4.035441	CACCCTTCTTGTGGCAAAATTTTG	59.965	41.667	23.74	23.74	41.03	2.44
97	98	4.198530	CCCTTCTTGTGGCAAAATTTTGT	58.801	39.130	27.13	0.00	40.24	2.83
98	99	4.035441	CCCTTCTTGTGGCAAAATTTTGTG	59.965	41.667	27.13	8.90	40.24	3.33
99	100	4.635324	CCTTCTTGTGGCAAAATTTTGTGT	59.365	37.500	27.13	0.00	40.24	3.72
100	101	5.123661	CCTTCTTGTGGCAAAATTTTGTGTT	59.876	36.000	27.13	0.00	40.24	3.32
101	102	6.349197	CCTTCTTGTGGCAAAATTTTGTGTTT	60.349	34.615	27.13	0.00	40.24	2.83
102	103	5.936054	TCTTGTGGCAAAATTTTGTGTTTG	58.064	33.333	27.13	15.46	40.24	2.93
103	104	5.702670	TCTTGTGGCAAAATTTTGTGTTTGA	59.297	32.000	27.13	17.04	40.24	2.69
104	105	5.288543	TGTGGCAAAATTTTGTGTTTGAC	57.711	34.783	27.13	16.30	42.14	3.18
105	106	4.999950	TGTGGCAAAATTTTGTGTTTGACT	59.000	33.333	27.13	0.00	42.26	3.41
106	107	6.166279	TGTGGCAAAATTTTGTGTTTGACTA	58.834	32.000	27.13	8.23	42.26	2.59
107	108	6.820656	TGTGGCAAAATTTTGTGTTTGACTAT	59.179	30.769	27.13	0.00	42.26	2.12
108	109	7.335422	TGTGGCAAAATTTTGTGTTTGACTATT	59.665	29.630	27.13	0.00	42.26	1.73
109	110	8.180920	GTGGCAAAATTTTGTGTTTGACTATTT	58.819	29.630	27.13	0.00	42.26	1.40
110	111	8.734386	TGGCAAAATTTTGTGTTTGACTATTTT	58.266	25.926	27.13	0.00	42.26	1.82
111	112	9.566530	GGCAAAATTTTGTGTTTGACTATTTTT	57.433	25.926	27.13	0.00	39.28	1.94
134	135	9.444600	TTTTGAAAGTTAGTACATATCTGACCC	57.555	33.333	0.00	0.00	0.00	4.46
135	136	7.973048	TGAAAGTTAGTACATATCTGACCCT	57.027	36.000	0.00	0.00	0.00	4.34
136	137	9.483489	TTGAAAGTTAGTACATATCTGACCCTA	57.517	33.333	0.00	0.00	0.00	3.53
137	138	9.132923	TGAAAGTTAGTACATATCTGACCCTAG	57.867	37.037	0.00	0.00	0.00	3.02
138	139	9.134055	GAAAGTTAGTACATATCTGACCCTAGT	57.866	37.037	0.00	0.00	0.00	2.57
139	140	9.490083	AAAGTTAGTACATATCTGACCCTAGTT	57.510	33.333	0.00	0.00	0.00	2.24
140	141	9.490083	AAGTTAGTACATATCTGACCCTAGTTT	57.510	33.333	0.00	0.00	0.00	2.66
153	154	9.250246	TCTGACCCTAGTTTATAAAATTTTGGG	57.750	33.333	19.95	19.95	37.08	4.12
154	155	9.250246	CTGACCCTAGTTTATAAAATTTTGGGA	57.750	33.333	24.59	11.65	35.22	4.37
155	156	9.777008	TGACCCTAGTTTATAAAATTTTGGGAT	57.223	29.630	24.59	15.19	35.22	3.85
171	172	3.868757	GGGATTTGACCCTTTTGCTAC	57.131	47.619	0.00	0.00	45.90	3.58
172	173	2.496070	GGGATTTGACCCTTTTGCTACC	59.504	50.000	0.00	0.00	45.90	3.18
173	174	2.163613	GGATTTGACCCTTTTGCTACCG	59.836	50.000	0.00	0.00	0.00	4.02
174	175	0.955905	TTTGACCCTTTTGCTACCGC	59.044	50.000	0.00	0.00	0.00	5.68
175	176	0.891904	TTGACCCTTTTGCTACCGCC	60.892	55.000	0.00	0.00	34.43	6.13
176	177	1.302993	GACCCTTTTGCTACCGCCA	60.303	57.895	0.00	0.00	34.43	5.69
177	178	1.303317	ACCCTTTTGCTACCGCCAG	60.303	57.895	0.00	0.00	34.43	4.85
178	179	1.002624	CCCTTTTGCTACCGCCAGA	60.003	57.895	0.00	0.00	34.43	3.86
179	180	1.305930	CCCTTTTGCTACCGCCAGAC	61.306	60.000	0.00	0.00	34.43	3.51
180	181	0.321653	CCTTTTGCTACCGCCAGACT	60.322	55.000	0.00	0.00	34.43	3.24
181	182	1.079503	CTTTTGCTACCGCCAGACTC	58.920	55.000	0.00	0.00	34.43	3.36
182	183	0.321298	TTTTGCTACCGCCAGACTCC	60.321	55.000	0.00	0.00	34.43	3.85
183	184	1.476845	TTTGCTACCGCCAGACTCCA	61.477	55.000	0.00	0.00	34.43	3.86
184	185	1.264749	TTGCTACCGCCAGACTCCAT	61.265	55.000	0.00	0.00	34.43	3.41
185	186	1.227380	GCTACCGCCAGACTCCATG	60.227	63.158	0.00	0.00	0.00	3.66
186	187	1.676678	GCTACCGCCAGACTCCATGA	61.677	60.000	0.00	0.00	0.00	3.07
187	188	0.103208	CTACCGCCAGACTCCATGAC	59.897	60.000	0.00	0.00	0.00	3.06
188	189	1.663379	TACCGCCAGACTCCATGACG	61.663	60.000	0.00	0.00	0.00	4.35
189	190	2.202797	CGCCAGACTCCATGACGG	60.203	66.667	0.00	0.00	0.00	4.79
190	191	2.982130	GCCAGACTCCATGACGGT	59.018	61.111	0.00	0.00	35.57	4.83
191	192	1.663379	CGCCAGACTCCATGACGGTA	61.663	60.000	0.00	0.00	35.57	4.02
192	193	0.103208	GCCAGACTCCATGACGGTAG	59.897	60.000	0.00	0.00	35.57	3.18
193	194	0.747255	CCAGACTCCATGACGGTAGG	59.253	60.000	0.00	0.00	35.57	3.18
194	195	1.685180	CCAGACTCCATGACGGTAGGA	60.685	57.143	0.00	0.00	35.57	2.94
195	196	2.100197	CAGACTCCATGACGGTAGGAA	58.900	52.381	0.00	0.00	35.57	3.36
196	197	2.496070	CAGACTCCATGACGGTAGGAAA	59.504	50.000	0.00	0.00	35.57	3.13
197	198	2.496470	AGACTCCATGACGGTAGGAAAC	59.504	50.000	0.00	0.00	35.57	2.78
198	199	2.232941	GACTCCATGACGGTAGGAAACA	59.767	50.000	0.00	0.00	35.57	2.83
199	200	2.635915	ACTCCATGACGGTAGGAAACAA	59.364	45.455	0.00	0.00	35.57	2.83
200	201	3.000727	CTCCATGACGGTAGGAAACAAC	58.999	50.000	0.00	0.00	35.57	3.32
201	202	2.081462	CCATGACGGTAGGAAACAACC	58.919	52.381	0.00	0.00	0.00	3.77
202	203	2.081462	CATGACGGTAGGAAACAACCC	58.919	52.381	0.00	0.00	31.68	4.11
203	204	1.426751	TGACGGTAGGAAACAACCCT	58.573	50.000	0.00	0.00	37.80	4.34
204	205	2.607499	TGACGGTAGGAAACAACCCTA	58.393	47.619	0.00	0.00	35.30	3.53
208	209	1.730501	GTAGGAAACAACCCTACCGC	58.269	55.000	7.86	0.00	46.52	5.68
209	210	0.614812	TAGGAAACAACCCTACCGCC	59.385	55.000	0.00	0.00	35.30	6.13
210	211	1.073548	GGAAACAACCCTACCGCCA	59.926	57.895	0.00	0.00	0.00	5.69
211	212	0.537828	GGAAACAACCCTACCGCCAA	60.538	55.000	0.00	0.00	0.00	4.52
212	213	1.320507	GAAACAACCCTACCGCCAAA	58.679	50.000	0.00	0.00	0.00	3.28
213	214	1.001048	GAAACAACCCTACCGCCAAAC	60.001	52.381	0.00	0.00	0.00	2.93
214	215	0.106619	AACAACCCTACCGCCAAACA	60.107	50.000	0.00	0.00	0.00	2.83
215	216	0.106619	ACAACCCTACCGCCAAACAA	60.107	50.000	0.00	0.00	0.00	2.83
216	217	1.033574	CAACCCTACCGCCAAACAAA	58.966	50.000	0.00	0.00	0.00	2.83
217	218	1.034356	AACCCTACCGCCAAACAAAC	58.966	50.000	0.00	0.00	0.00	2.93
218	219	0.184211	ACCCTACCGCCAAACAAACT	59.816	50.000	0.00	0.00	0.00	2.66
219	220	0.596082	CCCTACCGCCAAACAAACTG	59.404	55.000	0.00	0.00	0.00	3.16
220	221	1.600023	CCTACCGCCAAACAAACTGA	58.400	50.000	0.00	0.00	0.00	3.41
221	222	1.265905	CCTACCGCCAAACAAACTGAC	59.734	52.381	0.00	0.00	0.00	3.51
222	223	0.938713	TACCGCCAAACAAACTGACG	59.061	50.000	0.00	0.00	0.00	4.35
223	224	1.008995	CCGCCAAACAAACTGACGG	60.009	57.895	0.00	0.00	0.00	4.79
224	225	1.720694	CCGCCAAACAAACTGACGGT	61.721	55.000	0.00	0.00	34.61	4.83
225	226	0.938713	CGCCAAACAAACTGACGGTA	59.061	50.000	0.00	0.00	0.00	4.02
226	227	1.070175	CGCCAAACAAACTGACGGTAG	60.070	52.381	0.00	0.00	0.00	3.18
227	228	1.334689	GCCAAACAAACTGACGGTAGC	60.335	52.381	0.00	0.00	0.00	3.58
228	229	1.265905	CCAAACAAACTGACGGTAGCC	59.734	52.381	0.00	0.00	0.00	3.93
229	230	2.218603	CAAACAAACTGACGGTAGCCT	58.781	47.619	0.00	0.00	0.00	4.58
230	231	1.878953	AACAAACTGACGGTAGCCTG	58.121	50.000	0.00	0.00	0.00	4.85
231	232	0.756903	ACAAACTGACGGTAGCCTGT	59.243	50.000	0.00	0.00	0.00	4.00
232	233	1.965643	ACAAACTGACGGTAGCCTGTA	59.034	47.619	0.00	0.00	0.00	2.74
233	234	2.565834	ACAAACTGACGGTAGCCTGTAT	59.434	45.455	0.00	0.00	0.00	2.29
234	235	3.765511	ACAAACTGACGGTAGCCTGTATA	59.234	43.478	0.00	0.00	0.00	1.47
235	236	4.142227	ACAAACTGACGGTAGCCTGTATAG	60.142	45.833	0.00	0.00	0.00	1.31
236	237	1.955080	ACTGACGGTAGCCTGTATAGC	59.045	52.381	0.00	0.00	0.00	2.97
237	238	1.269998	CTGACGGTAGCCTGTATAGCC	59.730	57.143	0.00	0.00	0.00	3.93
238	239	1.133575	TGACGGTAGCCTGTATAGCCT	60.134	52.381	0.00	0.00	0.00	4.58
239	240	1.962100	GACGGTAGCCTGTATAGCCTT	59.038	52.381	0.00	0.00	0.00	4.35
240	241	3.152341	GACGGTAGCCTGTATAGCCTTA	58.848	50.000	0.00	0.00	0.00	2.69
241	242	2.889678	ACGGTAGCCTGTATAGCCTTAC	59.110	50.000	0.00	0.00	0.00	2.34
242	243	2.230750	CGGTAGCCTGTATAGCCTTACC	59.769	54.545	0.00	0.00	0.00	2.85
243	244	2.230750	GGTAGCCTGTATAGCCTTACCG	59.769	54.545	0.00	0.00	0.00	4.02
244	245	0.680061	AGCCTGTATAGCCTTACCGC	59.320	55.000	0.00	0.00	0.00	5.68
245	246	0.320508	GCCTGTATAGCCTTACCGCC	60.321	60.000	0.00	0.00	0.00	6.13
246	247	1.045407	CCTGTATAGCCTTACCGCCA	58.955	55.000	0.00	0.00	0.00	5.69
247	248	1.270147	CCTGTATAGCCTTACCGCCAC	60.270	57.143	0.00	0.00	0.00	5.01
248	249	0.386476	TGTATAGCCTTACCGCCACG	59.614	55.000	0.00	0.00	0.00	4.94
261	262	4.143333	CCACGGGTCCAGCGGTAG	62.143	72.222	0.00	0.00	0.00	3.18
262	263	4.143333	CACGGGTCCAGCGGTAGG	62.143	72.222	0.00	0.00	0.00	3.18
272	273	3.337619	GCGGTAGGCATGAGCATG	58.662	61.111	6.11	6.11	44.61	4.06
282	283	2.717580	CATGAGCATGCACTGTGTTT	57.282	45.000	21.98	0.00	31.39	2.83
283	284	2.592194	CATGAGCATGCACTGTGTTTC	58.408	47.619	21.98	6.41	31.39	2.78
284	285	1.677942	TGAGCATGCACTGTGTTTCA	58.322	45.000	21.98	9.23	0.00	2.69
285	286	2.232399	TGAGCATGCACTGTGTTTCAT	58.768	42.857	21.98	1.74	0.00	2.57
286	287	3.410508	TGAGCATGCACTGTGTTTCATA	58.589	40.909	21.98	0.00	0.00	2.15
287	288	3.189080	TGAGCATGCACTGTGTTTCATAC	59.811	43.478	21.98	0.00	0.00	2.39
288	289	3.415212	AGCATGCACTGTGTTTCATACT	58.585	40.909	21.98	2.19	0.00	2.12
289	290	3.822735	AGCATGCACTGTGTTTCATACTT	59.177	39.130	21.98	0.00	0.00	2.24
290	291	5.003160	AGCATGCACTGTGTTTCATACTTA	58.997	37.500	21.98	0.00	0.00	2.24
291	292	5.122869	AGCATGCACTGTGTTTCATACTTAG	59.877	40.000	21.98	0.00	0.00	2.18
292	293	5.122239	GCATGCACTGTGTTTCATACTTAGA	59.878	40.000	14.21	0.00	0.00	2.10
293	294	6.348458	GCATGCACTGTGTTTCATACTTAGAA	60.348	38.462	14.21	0.00	0.00	2.10
294	295	7.584108	CATGCACTGTGTTTCATACTTAGAAA	58.416	34.615	9.86	0.00	32.93	2.52
295	296	7.561021	TGCACTGTGTTTCATACTTAGAAAA	57.439	32.000	9.86	0.00	36.80	2.29
296	297	7.990917	TGCACTGTGTTTCATACTTAGAAAAA	58.009	30.769	9.86	0.00	36.80	1.94
316	317	2.905959	AAAATTACGGTAAGGCGTGC	57.094	45.000	6.74	0.00	0.00	5.34
317	318	1.810959	AAATTACGGTAAGGCGTGCA	58.189	45.000	6.74	0.00	0.00	4.57
318	319	1.810959	AATTACGGTAAGGCGTGCAA	58.189	45.000	6.74	0.00	0.00	4.08
319	320	1.081094	ATTACGGTAAGGCGTGCAAC	58.919	50.000	6.74	0.00	0.00	4.17
320	321	0.033781	TTACGGTAAGGCGTGCAACT	59.966	50.000	0.00	0.00	31.75	3.16
321	322	0.388907	TACGGTAAGGCGTGCAACTC	60.389	55.000	0.00	0.00	31.75	3.01
322	323	1.374252	CGGTAAGGCGTGCAACTCT	60.374	57.895	0.00	0.00	31.75	3.24
323	324	0.108992	CGGTAAGGCGTGCAACTCTA	60.109	55.000	0.00	0.00	31.75	2.43
324	325	1.356938	GGTAAGGCGTGCAACTCTAC	58.643	55.000	0.00	0.00	31.75	2.59
325	326	1.356938	GTAAGGCGTGCAACTCTACC	58.643	55.000	0.00	0.00	31.75	3.18
326	327	0.970640	TAAGGCGTGCAACTCTACCA	59.029	50.000	0.00	0.00	31.75	3.25
327	328	0.602905	AAGGCGTGCAACTCTACCAC	60.603	55.000	0.00	0.00	31.75	4.16
328	329	2.033194	GGCGTGCAACTCTACCACC	61.033	63.158	0.00	0.00	31.75	4.61
329	330	1.301401	GCGTGCAACTCTACCACCA	60.301	57.895	0.00	0.00	31.75	4.17
330	331	1.291877	GCGTGCAACTCTACCACCAG	61.292	60.000	0.00	0.00	31.75	4.00
331	332	0.670546	CGTGCAACTCTACCACCAGG	60.671	60.000	0.00	0.00	35.99	4.45
332	333	0.321653	GTGCAACTCTACCACCAGGG	60.322	60.000	0.00	0.00	44.81	4.45
333	334	0.472925	TGCAACTCTACCACCAGGGA	60.473	55.000	0.00	0.00	41.15	4.20
334	335	0.036294	GCAACTCTACCACCAGGGAC	60.036	60.000	0.00	0.00	41.15	4.46
335	336	0.613777	CAACTCTACCACCAGGGACC	59.386	60.000	0.00	0.00	41.15	4.46
336	337	0.492276	AACTCTACCACCAGGGACCT	59.508	55.000	0.00	0.00	41.15	3.85
337	338	0.492276	ACTCTACCACCAGGGACCTT	59.508	55.000	0.00	0.00	41.15	3.50
338	339	0.905357	CTCTACCACCAGGGACCTTG	59.095	60.000	0.00	0.00	41.15	3.61
339	340	0.546747	TCTACCACCAGGGACCTTGG	60.547	60.000	20.81	20.81	41.15	3.61
340	341	2.198304	CTACCACCAGGGACCTTGGC	62.198	65.000	22.22	0.00	41.15	4.52
341	342	2.993038	TACCACCAGGGACCTTGGCA	62.993	60.000	22.22	2.81	41.15	4.92
342	343	2.282462	CACCAGGGACCTTGGCAC	60.282	66.667	22.22	0.00	0.00	5.01
343	344	2.450502	ACCAGGGACCTTGGCACT	60.451	61.111	22.22	0.06	0.00	4.40
344	345	1.151899	ACCAGGGACCTTGGCACTA	60.152	57.895	22.22	0.00	0.00	2.74
345	346	1.201429	ACCAGGGACCTTGGCACTAG	61.201	60.000	22.22	0.00	0.00	2.57
346	347	1.604378	CAGGGACCTTGGCACTAGG	59.396	63.158	3.63	3.63	38.79	3.02
347	348	2.272471	GGGACCTTGGCACTAGGC	59.728	66.667	5.11	0.00	43.74	3.93
348	349	2.301738	GGGACCTTGGCACTAGGCT	61.302	63.158	5.11	0.00	44.01	4.58
349	350	1.222113	GGACCTTGGCACTAGGCTC	59.778	63.158	5.11	2.95	44.01	4.70
350	351	1.268283	GGACCTTGGCACTAGGCTCT	61.268	60.000	5.11	0.00	44.01	4.09
351	352	0.615850	GACCTTGGCACTAGGCTCTT	59.384	55.000	5.11	0.00	44.01	2.85
352	353	1.831736	GACCTTGGCACTAGGCTCTTA	59.168	52.381	5.11	0.00	44.01	2.10
353	354	2.436173	GACCTTGGCACTAGGCTCTTAT	59.564	50.000	5.11	0.00	44.01	1.73
354	355	3.641906	GACCTTGGCACTAGGCTCTTATA	59.358	47.826	5.11	0.00	44.01	0.98
355	356	3.388350	ACCTTGGCACTAGGCTCTTATAC	59.612	47.826	5.11	0.00	44.01	1.47
356	357	3.244249	CCTTGGCACTAGGCTCTTATACC	60.244	52.174	0.00	0.00	44.01	2.73
357	358	2.326428	TGGCACTAGGCTCTTATACCC	58.674	52.381	0.00	0.00	44.01	3.69
358	359	2.090719	TGGCACTAGGCTCTTATACCCT	60.091	50.000	0.00	0.00	44.01	4.34
359	360	3.141460	TGGCACTAGGCTCTTATACCCTA	59.859	47.826	0.00	0.00	44.01	3.53
360	361	4.202792	TGGCACTAGGCTCTTATACCCTAT	60.203	45.833	0.00	0.00	44.01	2.57
361	362	4.403113	GGCACTAGGCTCTTATACCCTATC	59.597	50.000	0.00	0.00	44.01	2.08
362	363	4.096682	GCACTAGGCTCTTATACCCTATCG	59.903	50.000	0.00	0.00	40.25	2.92
363	364	5.254901	CACTAGGCTCTTATACCCTATCGT	58.745	45.833	0.00	0.00	31.26	3.73
364	365	5.354792	CACTAGGCTCTTATACCCTATCGTC	59.645	48.000	0.00	0.00	31.26	4.20
365	366	4.383931	AGGCTCTTATACCCTATCGTCA	57.616	45.455	0.00	0.00	0.00	4.35
366	367	4.936802	AGGCTCTTATACCCTATCGTCAT	58.063	43.478	0.00	0.00	0.00	3.06
367	368	6.075949	AGGCTCTTATACCCTATCGTCATA	57.924	41.667	0.00	0.00	0.00	2.15
368	369	6.123651	AGGCTCTTATACCCTATCGTCATAG	58.876	44.000	0.00	0.00	32.86	2.23
369	370	6.069556	AGGCTCTTATACCCTATCGTCATAGA	60.070	42.308	0.00	0.00	34.82	1.98
370	371	6.038492	GGCTCTTATACCCTATCGTCATAGAC	59.962	46.154	0.00	0.00	34.82	2.59
371	372	6.824704	GCTCTTATACCCTATCGTCATAGACT	59.175	42.308	0.00	0.00	34.82	3.24
372	373	7.011669	GCTCTTATACCCTATCGTCATAGACTC	59.988	44.444	0.00	0.00	34.82	3.36
373	374	8.148437	TCTTATACCCTATCGTCATAGACTCT	57.852	38.462	0.00	0.00	34.82	3.24
374	375	8.041919	TCTTATACCCTATCGTCATAGACTCTG	58.958	40.741	0.00	0.00	34.82	3.35
375	376	4.708576	ACCCTATCGTCATAGACTCTGA	57.291	45.455	0.00	0.00	34.82	3.27
376	377	4.391155	ACCCTATCGTCATAGACTCTGAC	58.609	47.826	10.23	10.23	39.69	3.51
384	385	5.814764	GTCATAGACTCTGACGGTAAGAA	57.185	43.478	5.34	0.00	34.24	2.52
385	386	6.192234	GTCATAGACTCTGACGGTAAGAAA	57.808	41.667	5.34	0.00	34.24	2.52
386	387	6.618811	GTCATAGACTCTGACGGTAAGAAAA	58.381	40.000	5.34	0.00	34.24	2.29
387	388	7.088905	GTCATAGACTCTGACGGTAAGAAAAA	58.911	38.462	5.34	0.00	34.24	1.94
388	389	7.760340	GTCATAGACTCTGACGGTAAGAAAAAT	59.240	37.037	5.34	0.00	34.24	1.82
389	390	7.759886	TCATAGACTCTGACGGTAAGAAAAATG	59.240	37.037	0.00	0.00	0.00	2.32
390	391	5.855045	AGACTCTGACGGTAAGAAAAATGT	58.145	37.500	0.00	0.00	0.00	2.71
391	392	6.289064	AGACTCTGACGGTAAGAAAAATGTT	58.711	36.000	0.00	0.00	0.00	2.71
392	393	7.439381	AGACTCTGACGGTAAGAAAAATGTTA	58.561	34.615	0.00	0.00	0.00	2.41
393	394	7.599245	AGACTCTGACGGTAAGAAAAATGTTAG	59.401	37.037	0.00	0.00	0.00	2.34
394	395	7.439381	ACTCTGACGGTAAGAAAAATGTTAGA	58.561	34.615	0.00	0.00	0.00	2.10
395	396	8.095169	ACTCTGACGGTAAGAAAAATGTTAGAT	58.905	33.333	0.00	0.00	0.00	1.98
396	397	8.475331	TCTGACGGTAAGAAAAATGTTAGATC	57.525	34.615	0.00	0.00	0.00	2.75
397	398	8.311836	TCTGACGGTAAGAAAAATGTTAGATCT	58.688	33.333	0.00	0.00	0.00	2.75
398	399	8.475331	TGACGGTAAGAAAAATGTTAGATCTC	57.525	34.615	0.00	0.00	0.00	2.75
399	400	8.092068	TGACGGTAAGAAAAATGTTAGATCTCA	58.908	33.333	0.00	0.00	0.00	3.27
400	401	8.842358	ACGGTAAGAAAAATGTTAGATCTCAA	57.158	30.769	0.00	0.00	0.00	3.02
401	402	9.280174	ACGGTAAGAAAAATGTTAGATCTCAAA	57.720	29.630	0.00	0.00	0.00	2.69
419	420	9.807649	GATCTCAAAATATTTGCAAACTATGGT	57.192	29.630	15.41	0.00	0.00	3.55
420	421	9.807649	ATCTCAAAATATTTGCAAACTATGGTC	57.192	29.630	15.41	0.00	0.00	4.02
421	422	8.801299	TCTCAAAATATTTGCAAACTATGGTCA	58.199	29.630	15.41	0.00	0.00	4.02
422	423	8.984891	TCAAAATATTTGCAAACTATGGTCAG	57.015	30.769	15.41	0.00	0.00	3.51
423	424	8.801299	TCAAAATATTTGCAAACTATGGTCAGA	58.199	29.630	15.41	2.27	0.00	3.27
424	425	9.590451	CAAAATATTTGCAAACTATGGTCAGAT	57.410	29.630	15.41	0.00	0.00	2.90
425	426	9.807649	AAAATATTTGCAAACTATGGTCAGATC	57.192	29.630	15.41	0.00	0.00	2.75
426	427	8.757982	AATATTTGCAAACTATGGTCAGATCT	57.242	30.769	15.41	0.00	0.00	2.75
427	428	9.851686	AATATTTGCAAACTATGGTCAGATCTA	57.148	29.630	15.41	0.00	0.00	1.98
428	429	7.798596	ATTTGCAAACTATGGTCAGATCTAG	57.201	36.000	15.41	0.00	0.00	2.43
429	430	6.544928	TTGCAAACTATGGTCAGATCTAGA	57.455	37.500	0.00	0.00	0.00	2.43
430	431	5.907207	TGCAAACTATGGTCAGATCTAGAC	58.093	41.667	13.69	13.69	35.29	2.59
431	432	5.658634	TGCAAACTATGGTCAGATCTAGACT	59.341	40.000	18.57	8.04	36.29	3.24
432	433	6.833933	TGCAAACTATGGTCAGATCTAGACTA	59.166	38.462	18.57	15.25	36.29	2.59
433	434	7.342026	TGCAAACTATGGTCAGATCTAGACTAA	59.658	37.037	18.57	11.50	36.29	2.24
434	435	7.650104	GCAAACTATGGTCAGATCTAGACTAAC	59.350	40.741	18.57	8.26	36.29	2.34
435	436	8.908903	CAAACTATGGTCAGATCTAGACTAACT	58.091	37.037	18.57	7.28	36.29	2.24
436	437	9.482175	AAACTATGGTCAGATCTAGACTAACTT	57.518	33.333	18.57	6.78	36.29	2.66
437	438	9.482175	AACTATGGTCAGATCTAGACTAACTTT	57.518	33.333	18.57	9.08	36.29	2.66
438	439	9.127277	ACTATGGTCAGATCTAGACTAACTTTC	57.873	37.037	18.57	6.79	36.29	2.62
439	440	7.962995	ATGGTCAGATCTAGACTAACTTTCA	57.037	36.000	18.57	10.55	36.29	2.69
440	441	7.397892	TGGTCAGATCTAGACTAACTTTCAG	57.602	40.000	18.57	0.00	36.29	3.02
441	442	7.175797	TGGTCAGATCTAGACTAACTTTCAGA	58.824	38.462	18.57	0.00	36.29	3.27
442	443	7.670140	TGGTCAGATCTAGACTAACTTTCAGAA	59.330	37.037	18.57	0.00	36.29	3.02
443	444	8.524487	GGTCAGATCTAGACTAACTTTCAGAAA	58.476	37.037	18.57	0.00	36.29	2.52
444	445	9.915629	GTCAGATCTAGACTAACTTTCAGAAAA	57.084	33.333	14.41	0.00	33.29	2.29
446	447	9.364989	CAGATCTAGACTAACTTTCAGAAAAGG	57.635	37.037	0.00	0.00	45.15	3.11
447	448	8.536175	AGATCTAGACTAACTTTCAGAAAAGGG	58.464	37.037	0.00	0.00	45.15	3.95
448	449	7.613551	TCTAGACTAACTTTCAGAAAAGGGT	57.386	36.000	0.00	0.00	45.15	4.34
449	450	7.668492	TCTAGACTAACTTTCAGAAAAGGGTC	58.332	38.462	0.00	4.04	45.15	4.46
450	451	6.248569	AGACTAACTTTCAGAAAAGGGTCA	57.751	37.500	14.71	0.00	45.15	4.02
451	452	6.659824	AGACTAACTTTCAGAAAAGGGTCAA	58.340	36.000	14.71	0.00	45.15	3.18
452	453	7.116736	AGACTAACTTTCAGAAAAGGGTCAAA	58.883	34.615	14.71	0.00	45.15	2.69
453	454	7.614192	AGACTAACTTTCAGAAAAGGGTCAAAA	59.386	33.333	14.71	0.00	45.15	2.44
454	455	7.544622	ACTAACTTTCAGAAAAGGGTCAAAAC	58.455	34.615	0.00	0.00	45.15	2.43
455	456	5.993748	ACTTTCAGAAAAGGGTCAAAACA	57.006	34.783	0.00	0.00	45.15	2.83
456	457	6.544928	ACTTTCAGAAAAGGGTCAAAACAT	57.455	33.333	0.00	0.00	45.15	2.71
457	458	6.340522	ACTTTCAGAAAAGGGTCAAAACATG	58.659	36.000	0.00	0.00	45.15	3.21
458	459	6.154363	ACTTTCAGAAAAGGGTCAAAACATGA	59.846	34.615	0.00	0.00	45.15	3.07
459	460	6.537453	TTCAGAAAAGGGTCAAAACATGAA	57.463	33.333	0.00	0.00	40.50	2.57
460	461	6.537453	TCAGAAAAGGGTCAAAACATGAAA	57.463	33.333	0.00	0.00	40.50	2.69
461	462	7.123355	TCAGAAAAGGGTCAAAACATGAAAT	57.877	32.000	0.00	0.00	40.50	2.17
462	463	7.563906	TCAGAAAAGGGTCAAAACATGAAATT	58.436	30.769	0.00	0.00	40.50	1.82
463	464	8.046107	TCAGAAAAGGGTCAAAACATGAAATTT	58.954	29.630	0.00	0.00	40.50	1.82
464	465	9.323985	CAGAAAAGGGTCAAAACATGAAATTTA	57.676	29.630	0.00	0.00	40.50	1.40
465	466	9.546428	AGAAAAGGGTCAAAACATGAAATTTAG	57.454	29.630	0.00	0.00	40.50	1.85
466	467	7.728847	AAAGGGTCAAAACATGAAATTTAGC	57.271	32.000	0.00	0.00	40.50	3.09
467	468	5.793817	AGGGTCAAAACATGAAATTTAGCC	58.206	37.500	0.00	2.28	40.50	3.93
468	469	4.935205	GGGTCAAAACATGAAATTTAGCCC	59.065	41.667	0.00	8.67	40.50	5.19
469	470	5.512232	GGGTCAAAACATGAAATTTAGCCCA	60.512	40.000	0.00	0.00	40.50	5.36
470	471	5.408299	GGTCAAAACATGAAATTTAGCCCAC	59.592	40.000	0.00	0.00	40.50	4.61
471	472	5.408299	GTCAAAACATGAAATTTAGCCCACC	59.592	40.000	0.00	0.00	40.50	4.61
474	475	4.741321	ACATGAAATTTAGCCCACCATG	57.259	40.909	0.00	10.56	36.81	3.66
478	479	3.132646	TGAAATTTAGCCCACCATGATGC	59.867	43.478	0.00	0.00	0.00	3.91
484	485	1.377072	CCCACCATGATGCGTGACA	60.377	57.895	13.32	0.00	31.36	3.58
497	498	1.635663	CGTGACACATTTCTCCGGGC	61.636	60.000	0.00	0.00	0.00	6.13
518	521	0.246635	GTACTCCTCTCTTGCCGCAA	59.753	55.000	5.52	5.52	0.00	4.85
524	527	0.739112	CTCTCTTGCCGCAAGACTCC	60.739	60.000	28.18	0.00	44.27	3.85
557	560	1.570967	CGGTCGTGTCACGTGTCTA	59.429	57.895	23.82	2.32	43.14	2.59
567	570	2.273908	ACGTGTCTATCGTGCCCTT	58.726	52.632	0.00	0.00	40.07	3.95
604	607	1.673168	GTGTGCATCAGAGGGAATCC	58.327	55.000	0.00	0.00	0.00	3.01
613	616	1.066587	GAGGGAATCCGACGCTCTG	59.933	63.158	0.00	0.00	41.76	3.35
616	619	1.227002	GGAATCCGACGCTCTGTCC	60.227	63.158	0.00	0.00	45.23	4.02
618	621	0.802607	GAATCCGACGCTCTGTCCAC	60.803	60.000	0.00	0.00	45.23	4.02
631	634	4.680237	TCCACTGCCGTCCTTGCG	62.680	66.667	0.00	0.00	0.00	4.85
632	635	4.680237	CCACTGCCGTCCTTGCGA	62.680	66.667	0.00	0.00	0.00	5.10
633	636	3.114616	CACTGCCGTCCTTGCGAG	61.115	66.667	0.00	0.00	0.00	5.03
635	638	2.507992	CTGCCGTCCTTGCGAGAG	60.508	66.667	1.22	0.00	0.00	3.20
657	660	3.188048	GCATACATGGCTGCAATCTACTC	59.812	47.826	14.71	0.00	38.28	2.59
660	663	0.107456	ATGGCTGCAATCTACTCGGG	59.893	55.000	0.50	0.00	0.00	5.14
727	730	3.350219	ACAGCGACCTGAAATAATGGT	57.650	42.857	0.00	0.00	41.77	3.55
730	733	1.065551	GCGACCTGAAATAATGGTGGC	59.934	52.381	0.00	0.00	45.28	5.01
747	750	3.900892	CCATCGACGCGGGTAGCT	61.901	66.667	12.47	0.00	45.59	3.32
748	751	2.549198	CCATCGACGCGGGTAGCTA	61.549	63.158	12.47	0.00	45.59	3.32
749	752	1.082038	CATCGACGCGGGTAGCTAG	60.082	63.158	12.47	0.00	45.59	3.42
783	786	4.578871	TCCACGGGATAATAATGCAGATG	58.421	43.478	0.00	0.00	0.00	2.90
811	814	0.299895	CATGCGATCGTGTTCTCTGC	59.700	55.000	17.81	0.00	0.00	4.26
838	841	2.216750	ATCGGCACATTGGTTGCAGC	62.217	55.000	0.00	0.00	0.00	5.25
881	884	4.405671	TCCCCTCTCGTCGCGTCT	62.406	66.667	5.77	0.00	0.00	4.18
882	885	3.878519	CCCCTCTCGTCGCGTCTC	61.879	72.222	5.77	0.00	0.00	3.36
883	886	4.225340	CCCTCTCGTCGCGTCTCG	62.225	72.222	5.77	10.29	40.15	4.04
901	928	0.320073	CGCCCGTGTTGAGGAAGTAA	60.320	55.000	0.00	0.00	0.00	2.24
947	974	1.155424	TGCCGAGTTGACCGTTTGTC	61.155	55.000	0.00	0.00	44.72	3.18
966	993	1.203063	TCTGTGTCCAGTAGGTGAGCT	60.203	52.381	0.00	0.00	39.82	4.09
969	996	0.542938	TGTCCAGTAGGTGAGCTGCT	60.543	55.000	0.00	0.00	35.89	4.24
1139	1175	0.600057	GTCCAGAACCTCCGTACGTT	59.400	55.000	15.21	0.99	0.00	3.99
1142	1178	1.334054	CAGAACCTCCGTACGTTTCG	58.666	55.000	15.21	0.00	0.00	3.46
1143	1179	0.954452	AGAACCTCCGTACGTTTCGT	59.046	50.000	15.21	1.63	44.35	3.85
1146	1182	2.090524	CCTCCGTACGTTTCGTGCC	61.091	63.158	15.21	0.00	41.39	5.01
1147	1183	1.080974	CTCCGTACGTTTCGTGCCT	60.081	57.895	15.21	0.00	41.39	4.75
1148	1184	1.069378	CTCCGTACGTTTCGTGCCTC	61.069	60.000	15.21	0.00	41.39	4.70
1149	1185	2.090524	CCGTACGTTTCGTGCCTCC	61.091	63.158	15.21	0.00	41.39	4.30
1150	1186	1.080974	CGTACGTTTCGTGCCTCCT	60.081	57.895	7.22	0.00	41.39	3.69
1151	1187	1.069378	CGTACGTTTCGTGCCTCCTC	61.069	60.000	7.22	0.00	41.39	3.71
1152	1188	0.243095	GTACGTTTCGTGCCTCCTCT	59.757	55.000	0.00	0.00	41.39	3.69
1153	1189	0.524862	TACGTTTCGTGCCTCCTCTC	59.475	55.000	0.00	0.00	41.39	3.20
1164	1200	0.478507	CCTCCTCTCCTCCTCCTCTC	59.521	65.000	0.00	0.00	0.00	3.20
1171	1207	2.126882	CTCCTCCTCCTCTCTCTCTCA	58.873	57.143	0.00	0.00	0.00	3.27
1197	1239	0.806102	CTGAATCGGGTCGACGCAAT	60.806	55.000	29.06	16.48	39.18	3.56
1205	1247	2.536130	CGGGTCGACGCAATATTGTTTC	60.536	50.000	29.06	11.68	0.00	2.78
1207	1249	3.413558	GGTCGACGCAATATTGTTTCAC	58.586	45.455	16.61	12.22	0.00	3.18
1240	1282	3.519930	GAGGACGAGGGCGAGACC	61.520	72.222	0.00	0.00	41.64	3.85
1419	1461	5.847304	GGCAACTTTTCTTTCTTTCTCCAT	58.153	37.500	0.00	0.00	0.00	3.41
1423	1465	9.481340	GCAACTTTTCTTTCTTTCTCCATAATT	57.519	29.630	0.00	0.00	0.00	1.40
1425	1467	9.481340	AACTTTTCTTTCTTTCTCCATAATTGC	57.519	29.630	0.00	0.00	0.00	3.56
1426	1468	8.864087	ACTTTTCTTTCTTTCTCCATAATTGCT	58.136	29.630	0.00	0.00	0.00	3.91
1431	1473	8.462016	TCTTTCTTTCTCCATAATTGCTAAAGC	58.538	33.333	0.00	0.00	42.50	3.51
1448	1490	7.736447	GCTAAAGCACATCTAGATTAACCAT	57.264	36.000	1.33	0.00	41.59	3.55
1449	1491	8.833231	GCTAAAGCACATCTAGATTAACCATA	57.167	34.615	1.33	0.00	41.59	2.74
1450	1492	9.273016	GCTAAAGCACATCTAGATTAACCATAA	57.727	33.333	1.33	0.00	41.59	1.90
1467	1509	9.899661	TTAACCATAAGTATTGCACATCTAAGT	57.100	29.630	0.00	0.00	0.00	2.24
1468	1510	8.438676	AACCATAAGTATTGCACATCTAAGTC	57.561	34.615	0.00	0.00	0.00	3.01
1469	1511	6.992715	ACCATAAGTATTGCACATCTAAGTCC	59.007	38.462	0.00	0.00	0.00	3.85
1470	1512	7.147479	ACCATAAGTATTGCACATCTAAGTCCT	60.147	37.037	0.00	0.00	0.00	3.85
1471	1513	8.367911	CCATAAGTATTGCACATCTAAGTCCTA	58.632	37.037	0.00	0.00	0.00	2.94
1472	1514	9.197694	CATAAGTATTGCACATCTAAGTCCTAC	57.802	37.037	0.00	0.00	0.00	3.18
1473	1515	7.425224	AAGTATTGCACATCTAAGTCCTACT	57.575	36.000	0.00	0.00	0.00	2.57
1474	1516	8.534954	AAGTATTGCACATCTAAGTCCTACTA	57.465	34.615	0.00	0.00	0.00	1.82
1475	1517	8.534954	AGTATTGCACATCTAAGTCCTACTAA	57.465	34.615	0.00	0.00	0.00	2.24
1476	1518	8.634444	AGTATTGCACATCTAAGTCCTACTAAG	58.366	37.037	0.00	0.00	0.00	2.18
1477	1519	6.852420	TTGCACATCTAAGTCCTACTAAGT	57.148	37.500	0.00	0.00	0.00	2.24
1478	1520	6.452494	TGCACATCTAAGTCCTACTAAGTC	57.548	41.667	0.00	0.00	0.00	3.01
1479	1521	5.949952	TGCACATCTAAGTCCTACTAAGTCA	59.050	40.000	0.00	0.00	0.00	3.41
1480	1522	6.607600	TGCACATCTAAGTCCTACTAAGTCAT	59.392	38.462	0.00	0.00	0.00	3.06
1481	1523	7.124298	TGCACATCTAAGTCCTACTAAGTCATT	59.876	37.037	0.00	0.00	0.00	2.57
1482	1524	7.436673	GCACATCTAAGTCCTACTAAGTCATTG	59.563	40.741	0.00	0.00	0.00	2.82
1483	1525	8.687242	CACATCTAAGTCCTACTAAGTCATTGA	58.313	37.037	0.00	0.00	0.00	2.57
1484	1526	9.427821	ACATCTAAGTCCTACTAAGTCATTGAT	57.572	33.333	0.00	0.00	0.00	2.57
1487	1529	8.622157	TCTAAGTCCTACTAAGTCATTGATTCG	58.378	37.037	0.00	0.00	0.00	3.34
1488	1530	6.777213	AGTCCTACTAAGTCATTGATTCGT	57.223	37.500	0.00	0.00	0.00	3.85
1489	1531	6.565234	AGTCCTACTAAGTCATTGATTCGTG	58.435	40.000	0.00	0.00	0.00	4.35
1490	1532	6.153000	AGTCCTACTAAGTCATTGATTCGTGT	59.847	38.462	0.00	0.00	0.00	4.49
1491	1533	6.253727	GTCCTACTAAGTCATTGATTCGTGTG	59.746	42.308	0.00	0.00	0.00	3.82
1492	1534	5.520288	CCTACTAAGTCATTGATTCGTGTGG	59.480	44.000	0.00	0.00	0.00	4.17
1493	1535	5.147330	ACTAAGTCATTGATTCGTGTGGA	57.853	39.130	0.00	0.00	0.00	4.02
1494	1536	5.734720	ACTAAGTCATTGATTCGTGTGGAT	58.265	37.500	0.00	0.00	0.00	3.41
1495	1537	6.873997	ACTAAGTCATTGATTCGTGTGGATA	58.126	36.000	0.00	0.00	0.00	2.59
1496	1538	7.500992	ACTAAGTCATTGATTCGTGTGGATAT	58.499	34.615	0.00	0.00	0.00	1.63
1497	1539	7.987458	ACTAAGTCATTGATTCGTGTGGATATT	59.013	33.333	0.00	0.00	0.00	1.28
1498	1540	7.630242	AAGTCATTGATTCGTGTGGATATTT	57.370	32.000	0.00	0.00	0.00	1.40
1499	1541	7.630242	AGTCATTGATTCGTGTGGATATTTT	57.370	32.000	0.00	0.00	0.00	1.82
1500	1542	8.055279	AGTCATTGATTCGTGTGGATATTTTT	57.945	30.769	0.00	0.00	0.00	1.94
1529	1571	9.533253	TTCCTTTTCTTTTTCTTCTTATGCTTG	57.467	29.630	0.00	0.00	0.00	4.01
1530	1572	8.912988	TCCTTTTCTTTTTCTTCTTATGCTTGA	58.087	29.630	0.00	0.00	0.00	3.02
1531	1573	9.702494	CCTTTTCTTTTTCTTCTTATGCTTGAT	57.298	29.630	0.00	0.00	0.00	2.57
1535	1577	9.903682	TTCTTTTTCTTCTTATGCTTGATTGAG	57.096	29.630	0.00	0.00	0.00	3.02
1536	1578	9.071276	TCTTTTTCTTCTTATGCTTGATTGAGT	57.929	29.630	0.00	0.00	0.00	3.41
1537	1579	9.125906	CTTTTTCTTCTTATGCTTGATTGAGTG	57.874	33.333	0.00	0.00	0.00	3.51
1538	1580	7.984422	TTTCTTCTTATGCTTGATTGAGTGA	57.016	32.000	0.00	0.00	0.00	3.41
1539	1581	8.571461	TTTCTTCTTATGCTTGATTGAGTGAT	57.429	30.769	0.00	0.00	0.00	3.06
1540	1582	8.571461	TTCTTCTTATGCTTGATTGAGTGATT	57.429	30.769	0.00	0.00	0.00	2.57
1541	1583	8.571461	TCTTCTTATGCTTGATTGAGTGATTT	57.429	30.769	0.00	0.00	0.00	2.17
1542	1584	9.671279	TCTTCTTATGCTTGATTGAGTGATTTA	57.329	29.630	0.00	0.00	0.00	1.40
1543	1585	9.932699	CTTCTTATGCTTGATTGAGTGATTTAG	57.067	33.333	0.00	0.00	0.00	1.85
1544	1586	9.671279	TTCTTATGCTTGATTGAGTGATTTAGA	57.329	29.630	0.00	0.00	0.00	2.10
1545	1587	9.842775	TCTTATGCTTGATTGAGTGATTTAGAT	57.157	29.630	0.00	0.00	0.00	1.98
1546	1588	9.880064	CTTATGCTTGATTGAGTGATTTAGATG	57.120	33.333	0.00	0.00	0.00	2.90
1547	1589	7.876936	ATGCTTGATTGAGTGATTTAGATGT	57.123	32.000	0.00	0.00	0.00	3.06
1548	1590	7.080353	TGCTTGATTGAGTGATTTAGATGTG	57.920	36.000	0.00	0.00	0.00	3.21
1549	1591	5.970023	GCTTGATTGAGTGATTTAGATGTGC	59.030	40.000	0.00	0.00	0.00	4.57
1550	1592	6.403964	GCTTGATTGAGTGATTTAGATGTGCA	60.404	38.462	0.00	0.00	0.00	4.57
1551	1593	7.451501	TTGATTGAGTGATTTAGATGTGCAA	57.548	32.000	0.00	0.00	0.00	4.08
1552	1594	7.634671	TGATTGAGTGATTTAGATGTGCAAT	57.365	32.000	0.00	0.00	0.00	3.56
1553	1595	8.735692	TGATTGAGTGATTTAGATGTGCAATA	57.264	30.769	0.00	0.00	0.00	1.90
1554	1596	9.176460	TGATTGAGTGATTTAGATGTGCAATAA	57.824	29.630	0.00	0.00	0.00	1.40
1555	1597	9.443283	GATTGAGTGATTTAGATGTGCAATAAC	57.557	33.333	0.00	0.00	0.00	1.89
1556	1598	8.565896	TTGAGTGATTTAGATGTGCAATAACT	57.434	30.769	0.00	0.00	0.00	2.24
1557	1599	9.665719	TTGAGTGATTTAGATGTGCAATAACTA	57.334	29.630	0.00	0.00	0.00	2.24
1558	1600	9.317936	TGAGTGATTTAGATGTGCAATAACTAG	57.682	33.333	0.00	0.00	0.00	2.57
1559	1601	8.668510	AGTGATTTAGATGTGCAATAACTAGG	57.331	34.615	0.00	0.00	0.00	3.02
1560	1602	7.716998	AGTGATTTAGATGTGCAATAACTAGGG	59.283	37.037	0.00	0.00	0.00	3.53
1561	1603	6.486657	TGATTTAGATGTGCAATAACTAGGGC	59.513	38.462	0.00	0.00	0.00	5.19
1562	1604	5.630415	TTAGATGTGCAATAACTAGGGCT	57.370	39.130	0.00	0.00	0.00	5.19
1563	1605	6.740944	TTAGATGTGCAATAACTAGGGCTA	57.259	37.500	0.00	0.00	0.00	3.93
1564	1606	5.220710	AGATGTGCAATAACTAGGGCTAG	57.779	43.478	0.00	0.00	39.04	3.42
1565	1607	4.901849	AGATGTGCAATAACTAGGGCTAGA	59.098	41.667	0.00	0.00	36.97	2.43
1566	1608	5.545723	AGATGTGCAATAACTAGGGCTAGAT	59.454	40.000	0.00	0.00	36.97	1.98
1567	1609	4.960938	TGTGCAATAACTAGGGCTAGATG	58.039	43.478	0.00	0.00	36.97	2.90
1568	1610	4.408921	TGTGCAATAACTAGGGCTAGATGT	59.591	41.667	0.00	0.00	36.97	3.06
1569	1611	4.752101	GTGCAATAACTAGGGCTAGATGTG	59.248	45.833	0.00	0.00	36.97	3.21
1570	1612	3.748568	GCAATAACTAGGGCTAGATGTGC	59.251	47.826	0.00	0.00	36.97	4.57
1604	1646	3.182967	CGCCATAGTTCAGACTTCAGAC	58.817	50.000	0.00	0.00	37.33	3.51
1618	1660	2.756840	TCAGACTTCCATCACTGCAG	57.243	50.000	13.48	13.48	0.00	4.41
1655	1697	2.287915	CGCAAGTTAACTGCTTCTGTGT	59.712	45.455	20.35	0.00	0.00	3.72
1863	1913	3.893200	TCCTCAAGAAACTCGAGGTACAA	59.107	43.478	18.41	0.00	45.51	2.41
1865	1915	3.635331	TCAAGAAACTCGAGGTACAACG	58.365	45.455	18.41	0.00	0.00	4.10
1867	1917	3.279853	AGAAACTCGAGGTACAACGTC	57.720	47.619	18.41	3.16	0.00	4.34
1869	1919	2.701073	AACTCGAGGTACAACGTCTG	57.299	50.000	18.41	0.00	31.33	3.51
1872	1922	2.818432	ACTCGAGGTACAACGTCTGAAT	59.182	45.455	18.41	0.00	31.33	2.57
1873	1923	3.255149	ACTCGAGGTACAACGTCTGAATT	59.745	43.478	18.41	0.00	31.33	2.17
1874	1924	3.571571	TCGAGGTACAACGTCTGAATTG	58.428	45.455	9.90	2.30	31.33	2.32
1906	1972	4.514066	ACTTTTGGACTTAAGCACTTACGG	59.486	41.667	1.29	0.00	0.00	4.02
1960	2026	2.556287	GTCTCCAAAACGCTGGCG	59.444	61.111	13.56	13.56	46.03	5.69
2221	2289	8.758633	TTATTTCGAGTTTCTAAGAGTGAAGG	57.241	34.615	0.00	0.00	0.00	3.46
2236	2304	4.813027	AGTGAAGGCTGCAAATTACATTG	58.187	39.130	0.00	0.00	0.00	2.82
2252	2320	2.850828	ATTGCCCAGGCCAGAAGCTC	62.851	60.000	5.01	0.00	43.05	4.09
2282	2350	2.720758	CTTCTTCGTCGGCTGCGTG	61.721	63.158	8.78	4.73	0.00	5.34
2402	2470	4.742438	TTTCCACGATGAACTTGCTAAC	57.258	40.909	0.00	0.00	0.00	2.34
2467	2535	1.066303	GGCAACATCGATCGTCTCTCT	59.934	52.381	15.94	0.00	0.00	3.10
2468	2536	2.115595	GCAACATCGATCGTCTCTCTG	58.884	52.381	15.94	7.53	0.00	3.35
2488	2556	6.378280	TCTCTGTCAGATGCAGTGTTCTAATA	59.622	38.462	2.22	0.00	35.60	0.98
2489	2557	6.935167	TCTGTCAGATGCAGTGTTCTAATAA	58.065	36.000	0.00	0.00	35.60	1.40
2490	2558	7.559486	TCTGTCAGATGCAGTGTTCTAATAAT	58.441	34.615	0.00	0.00	35.60	1.28
2491	2559	7.708322	TCTGTCAGATGCAGTGTTCTAATAATC	59.292	37.037	0.00	0.00	35.60	1.75
2551	2619	4.039092	CAGGGCTGGGTGGTGAGG	62.039	72.222	0.00	0.00	0.00	3.86
2554	2622	4.394712	GGCTGGGTGGTGAGGTCG	62.395	72.222	0.00	0.00	0.00	4.79
2573	2641	1.676014	CGAAGGCTCCGTCCAAGAAAT	60.676	52.381	0.00	0.00	0.00	2.17
2581	2649	4.122776	CTCCGTCCAAGAAATTGATCGAT	58.877	43.478	0.00	0.00	0.00	3.59
2636	7972	2.750237	GGGACACGGTGGATTGCC	60.750	66.667	13.48	2.47	0.00	4.52
2706	8042	5.344743	TTTTGTGTATGCCAGGTTTGAAA	57.655	34.783	0.00	0.00	0.00	2.69
2715	8051	2.676463	GCCAGGTTTGAAAACTGTTGCA	60.676	45.455	20.37	0.00	38.89	4.08
2721	8057	4.693095	GGTTTGAAAACTGTTGCAGGAAAA	59.307	37.500	5.93	0.00	38.89	2.29
2722	8058	5.180304	GGTTTGAAAACTGTTGCAGGAAAAA	59.820	36.000	5.93	0.00	38.89	1.94
2745	8083	0.740868	TCTGCTGTATGAACTGCCGC	60.741	55.000	5.16	0.00	46.73	6.53
2747	8085	2.813179	GCTGTATGAACTGCCGCCG	61.813	63.158	0.00	0.00	42.86	6.46
2752	8090	2.867793	TATGAACTGCCGCCGTGCAT	62.868	55.000	12.55	12.55	41.16	3.96
2853	8191	5.009410	GGAAGGAACCAAGCATCATCATAAG	59.991	44.000	0.00	0.00	0.00	1.73
2879	8217	5.192327	ACAAGGAACATCTGAAAAAGCTG	57.808	39.130	0.00	0.00	0.00	4.24
2894	8232	8.592105	TGAAAAAGCTGAAAATTATGAAGTGG	57.408	30.769	0.00	0.00	0.00	4.00
2895	8233	7.656948	TGAAAAAGCTGAAAATTATGAAGTGGG	59.343	33.333	0.00	0.00	0.00	4.61
2934	8272	8.293699	AGGAAACAAGTAGTGACAAAAAGAAT	57.706	30.769	0.00	0.00	0.00	2.40
3066	8404	9.289782	GAAATAATTGCATTATCACCCTCTAGT	57.710	33.333	0.00	0.00	34.50	2.57
3082	8420	6.661805	ACCCTCTAGTTCAAAGTTCAAAAACA	59.338	34.615	0.00	0.00	37.88	2.83
3265	8731	1.417517	AGAGAGTGTGTGCATTGGACA	59.582	47.619	6.93	6.93	0.00	4.02
3406	8873	9.946165	TTTTTAAGAGAAAAACTTCGAAGGATC	57.054	29.630	27.86	18.56	0.00	3.36
3449	8916	9.806203	CCTATGAAAATCATACATTTCAAAGCA	57.194	29.630	5.19	0.00	45.56	3.91
3456	8923	6.519679	TCATACATTTCAAAGCAGCTGAAT	57.480	33.333	20.43	3.85	32.98	2.57
3533	9000	0.809385	TCCTAGTCTCGACAAAGCCG	59.191	55.000	0.00	0.00	0.00	5.52
3601	9068	7.826252	TCACATTTTTCATTCTTTGTTTTGGGA	59.174	29.630	0.00	0.00	0.00	4.37
3616	9083	6.155827	TGTTTTGGGAAAATATTGCTCTTCG	58.844	36.000	0.00	0.00	32.22	3.79

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	5.171695	GCGTTGTTGCGATAACTTTGTTAAA	59.828	36.000	11.34	0.00	0.00	1.52
1	2	4.671516	GCGTTGTTGCGATAACTTTGTTAA	59.328	37.500	11.34	0.00	0.00	2.01
2	3	4.212911	GCGTTGTTGCGATAACTTTGTTA	58.787	39.130	11.34	0.00	0.00	2.41
3	4	3.040099	GCGTTGTTGCGATAACTTTGTT	58.960	40.909	11.34	0.00	0.00	2.83
4	5	2.032302	TGCGTTGTTGCGATAACTTTGT	59.968	40.909	11.34	0.00	37.81	2.83
5	6	2.400408	GTGCGTTGTTGCGATAACTTTG	59.600	45.455	11.34	0.00	37.81	2.77
6	7	2.646250	GTGCGTTGTTGCGATAACTTT	58.354	42.857	11.34	0.00	37.81	2.66
7	8	1.397945	CGTGCGTTGTTGCGATAACTT	60.398	47.619	11.34	0.00	37.81	2.66
8	9	0.162933	CGTGCGTTGTTGCGATAACT	59.837	50.000	11.34	0.00	37.81	2.24
9	10	0.162082	TCGTGCGTTGTTGCGATAAC	59.838	50.000	3.54	3.54	37.81	1.89
10	11	0.859882	TTCGTGCGTTGTTGCGATAA	59.140	45.000	0.00	0.00	37.81	1.75
11	12	0.436913	CTTCGTGCGTTGTTGCGATA	59.563	50.000	0.00	0.00	37.81	2.92
12	13	1.204062	CTTCGTGCGTTGTTGCGAT	59.796	52.632	0.00	0.00	37.81	4.58
13	14	1.422179	TTCTTCGTGCGTTGTTGCGA	61.422	50.000	0.00	0.00	37.81	5.10
14	15	0.384230	ATTCTTCGTGCGTTGTTGCG	60.384	50.000	0.00	0.00	37.81	4.85
15	16	1.318251	GATTCTTCGTGCGTTGTTGC	58.682	50.000	0.00	0.00	0.00	4.17
16	17	2.661504	TGATTCTTCGTGCGTTGTTG	57.338	45.000	0.00	0.00	0.00	3.33
17	18	2.159627	GGATGATTCTTCGTGCGTTGTT	59.840	45.455	0.00	0.00	0.00	2.83
18	19	1.732259	GGATGATTCTTCGTGCGTTGT	59.268	47.619	0.00	0.00	0.00	3.32
19	20	1.731709	TGGATGATTCTTCGTGCGTTG	59.268	47.619	0.00	0.00	32.22	4.10
20	21	2.002586	CTGGATGATTCTTCGTGCGTT	58.997	47.619	0.00	0.00	32.22	4.84
21	22	1.645034	CTGGATGATTCTTCGTGCGT	58.355	50.000	0.00	0.00	32.22	5.24
22	23	0.933097	CCTGGATGATTCTTCGTGCG	59.067	55.000	0.00	0.00	32.22	5.34
23	24	2.029838	ACCTGGATGATTCTTCGTGC	57.970	50.000	0.00	0.00	0.00	5.34
24	25	5.359756	TGATAACCTGGATGATTCTTCGTG	58.640	41.667	0.00	0.00	0.00	4.35
25	26	5.614324	TGATAACCTGGATGATTCTTCGT	57.386	39.130	0.00	0.00	0.00	3.85
26	27	6.925610	TTTGATAACCTGGATGATTCTTCG	57.074	37.500	0.00	0.00	0.00	3.79
27	28	7.014038	AGCATTTGATAACCTGGATGATTCTTC	59.986	37.037	0.00	0.00	0.00	2.87
28	29	6.837568	AGCATTTGATAACCTGGATGATTCTT	59.162	34.615	0.00	0.00	0.00	2.52
29	30	6.264744	CAGCATTTGATAACCTGGATGATTCT	59.735	38.462	0.00	0.00	0.00	2.40
30	31	6.444633	CAGCATTTGATAACCTGGATGATTC	58.555	40.000	0.00	0.00	0.00	2.52
31	32	5.221382	GCAGCATTTGATAACCTGGATGATT	60.221	40.000	0.00	0.00	0.00	2.57
32	33	4.280174	GCAGCATTTGATAACCTGGATGAT	59.720	41.667	0.00	0.00	0.00	2.45
33	34	3.633525	GCAGCATTTGATAACCTGGATGA	59.366	43.478	0.00	0.00	0.00	2.92
34	35	3.243636	GGCAGCATTTGATAACCTGGATG	60.244	47.826	0.00	0.00	0.00	3.51
35	36	2.961062	GGCAGCATTTGATAACCTGGAT	59.039	45.455	0.00	0.00	0.00	3.41
36	37	2.025037	AGGCAGCATTTGATAACCTGGA	60.025	45.455	0.00	0.00	0.00	3.86
37	38	2.360165	GAGGCAGCATTTGATAACCTGG	59.640	50.000	0.00	0.00	0.00	4.45
38	39	3.066342	CAGAGGCAGCATTTGATAACCTG	59.934	47.826	0.00	0.00	0.00	4.00
39	40	3.285484	CAGAGGCAGCATTTGATAACCT	58.715	45.455	0.00	0.00	0.00	3.50
40	41	2.223665	GCAGAGGCAGCATTTGATAACC	60.224	50.000	1.02	0.00	40.72	2.85
41	42	2.223665	GGCAGAGGCAGCATTTGATAAC	60.224	50.000	1.02	0.00	43.71	1.89
42	43	2.026641	GGCAGAGGCAGCATTTGATAA	58.973	47.619	1.02	0.00	43.71	1.75
43	44	1.064537	TGGCAGAGGCAGCATTTGATA	60.065	47.619	1.02	0.00	43.71	2.15
44	45	0.323999	TGGCAGAGGCAGCATTTGAT	60.324	50.000	1.02	0.00	43.71	2.57
45	46	1.075305	TGGCAGAGGCAGCATTTGA	59.925	52.632	1.02	0.00	43.71	2.69
46	47	1.214589	GTGGCAGAGGCAGCATTTG	59.785	57.895	0.00	0.00	43.71	2.32
47	48	1.076192	AGTGGCAGAGGCAGCATTT	59.924	52.632	0.00	0.00	43.71	2.32
48	49	1.677966	CAGTGGCAGAGGCAGCATT	60.678	57.895	0.00	0.00	43.71	3.56
49	50	2.045242	CAGTGGCAGAGGCAGCAT	60.045	61.111	0.00	0.00	43.71	3.79
50	51	1.767654	TAACAGTGGCAGAGGCAGCA	61.768	55.000	0.00	0.00	43.71	4.41
51	52	1.003355	TAACAGTGGCAGAGGCAGC	60.003	57.895	0.00	0.00	43.71	5.25
52	53	0.035317	TGTAACAGTGGCAGAGGCAG	59.965	55.000	0.00	0.00	43.71	4.85
53	54	0.250295	GTGTAACAGTGGCAGAGGCA	60.250	55.000	0.00	0.00	38.36	4.75
54	55	0.955919	GGTGTAACAGTGGCAGAGGC	60.956	60.000	0.00	0.00	39.98	4.70
55	56	0.396435	TGGTGTAACAGTGGCAGAGG	59.604	55.000	0.00	0.00	39.98	3.69
56	57	1.512926	GTGGTGTAACAGTGGCAGAG	58.487	55.000	0.00	0.00	39.98	3.35
57	58	0.107831	GGTGGTGTAACAGTGGCAGA	59.892	55.000	0.00	0.00	39.98	4.26
58	59	0.889186	GGGTGGTGTAACAGTGGCAG	60.889	60.000	0.00	0.00	39.98	4.85
59	60	1.149627	GGGTGGTGTAACAGTGGCA	59.850	57.895	0.00	0.00	39.98	4.92
60	61	0.179001	AAGGGTGGTGTAACAGTGGC	60.179	55.000	0.00	0.00	39.98	5.01
61	62	1.420138	AGAAGGGTGGTGTAACAGTGG	59.580	52.381	0.00	0.00	39.98	4.00
62	63	2.878406	CAAGAAGGGTGGTGTAACAGTG	59.122	50.000	0.00	0.00	39.98	3.66
63	64	2.508300	ACAAGAAGGGTGGTGTAACAGT	59.492	45.455	0.00	0.00	39.98	3.55
64	65	2.878406	CACAAGAAGGGTGGTGTAACAG	59.122	50.000	0.00	0.00	39.98	3.16
65	66	2.925724	CACAAGAAGGGTGGTGTAACA	58.074	47.619	0.00	0.00	39.98	2.41
73	74	3.473923	AATTTTGCCACAAGAAGGGTG	57.526	42.857	0.00	0.00	36.03	4.61
74	75	4.198530	CAAAATTTTGCCACAAGAAGGGT	58.801	39.130	17.48	0.00	0.00	4.34
75	76	4.035441	CACAAAATTTTGCCACAAGAAGGG	59.965	41.667	26.94	3.11	41.79	3.95
76	77	4.635324	ACACAAAATTTTGCCACAAGAAGG	59.365	37.500	26.94	9.09	41.79	3.46
77	78	5.799681	ACACAAAATTTTGCCACAAGAAG	57.200	34.783	26.94	10.62	41.79	2.85
78	79	6.205464	TCAAACACAAAATTTTGCCACAAGAA	59.795	30.769	26.94	7.01	41.79	2.52
79	80	5.702670	TCAAACACAAAATTTTGCCACAAGA	59.297	32.000	26.94	16.35	41.79	3.02
80	81	5.794448	GTCAAACACAAAATTTTGCCACAAG	59.206	36.000	26.94	14.64	41.79	3.16
81	82	5.471456	AGTCAAACACAAAATTTTGCCACAA	59.529	32.000	26.94	9.06	41.79	3.33
82	83	4.999950	AGTCAAACACAAAATTTTGCCACA	59.000	33.333	26.94	7.19	41.79	4.17
83	84	5.544136	AGTCAAACACAAAATTTTGCCAC	57.456	34.783	26.94	15.31	41.79	5.01
84	85	7.856145	AATAGTCAAACACAAAATTTTGCCA	57.144	28.000	26.94	5.60	41.79	4.92
85	86	9.566530	AAAAATAGTCAAACACAAAATTTTGCC	57.433	25.926	26.94	9.26	41.79	4.52
108	109	9.444600	GGGTCAGATATGTACTAACTTTCAAAA	57.555	33.333	0.00	0.00	0.00	2.44
109	110	8.822805	AGGGTCAGATATGTACTAACTTTCAAA	58.177	33.333	0.00	0.00	0.00	2.69
110	111	8.375493	AGGGTCAGATATGTACTAACTTTCAA	57.625	34.615	0.00	0.00	0.00	2.69
111	112	7.973048	AGGGTCAGATATGTACTAACTTTCA	57.027	36.000	0.00	0.00	0.00	2.69
112	113	9.134055	ACTAGGGTCAGATATGTACTAACTTTC	57.866	37.037	0.00	0.00	0.00	2.62
113	114	9.490083	AACTAGGGTCAGATATGTACTAACTTT	57.510	33.333	0.00	0.00	0.00	2.66
114	115	9.490083	AAACTAGGGTCAGATATGTACTAACTT	57.510	33.333	0.00	0.00	0.00	2.66
127	128	9.250246	CCCAAAATTTTATAAACTAGGGTCAGA	57.750	33.333	2.44	0.00	0.00	3.27
128	129	9.250246	TCCCAAAATTTTATAAACTAGGGTCAG	57.750	33.333	14.85	0.00	34.25	3.51
129	130	9.777008	ATCCCAAAATTTTATAAACTAGGGTCA	57.223	29.630	14.85	2.19	34.25	4.02
136	137	9.733556	GGGTCAAATCCCAAAATTTTATAAACT	57.266	29.630	2.44	0.00	46.30	2.66
152	153	2.163613	CGGTAGCAAAAGGGTCAAATCC	59.836	50.000	0.00	0.00	0.00	3.01
153	154	2.415491	GCGGTAGCAAAAGGGTCAAATC	60.415	50.000	0.00	0.00	44.35	2.17
154	155	1.544246	GCGGTAGCAAAAGGGTCAAAT	59.456	47.619	0.00	0.00	44.35	2.32
155	156	0.955905	GCGGTAGCAAAAGGGTCAAA	59.044	50.000	0.00	0.00	44.35	2.69
156	157	2.636299	GCGGTAGCAAAAGGGTCAA	58.364	52.632	0.00	0.00	44.35	3.18
157	158	4.390048	GCGGTAGCAAAAGGGTCA	57.610	55.556	0.00	0.00	44.35	4.02
167	168	1.227380	CATGGAGTCTGGCGGTAGC	60.227	63.158	0.00	0.00	44.18	3.58
168	169	0.103208	GTCATGGAGTCTGGCGGTAG	59.897	60.000	0.00	0.00	0.00	3.18
169	170	1.663379	CGTCATGGAGTCTGGCGGTA	61.663	60.000	0.00	0.00	38.04	4.02
170	171	2.982130	GTCATGGAGTCTGGCGGT	59.018	61.111	0.00	0.00	0.00	5.68
171	172	2.202797	CGTCATGGAGTCTGGCGG	60.203	66.667	0.00	0.00	38.04	6.13
172	173	1.663379	TACCGTCATGGAGTCTGGCG	61.663	60.000	0.00	0.00	42.00	5.69
173	174	0.103208	CTACCGTCATGGAGTCTGGC	59.897	60.000	0.00	0.00	42.00	4.85
174	175	0.747255	CCTACCGTCATGGAGTCTGG	59.253	60.000	0.00	0.00	42.00	3.86
175	176	1.763968	TCCTACCGTCATGGAGTCTG	58.236	55.000	0.00	0.00	42.00	3.51
176	177	2.496470	GTTTCCTACCGTCATGGAGTCT	59.504	50.000	0.00	0.00	42.00	3.24
177	178	2.232941	TGTTTCCTACCGTCATGGAGTC	59.767	50.000	0.00	0.00	42.00	3.36
178	179	2.253610	TGTTTCCTACCGTCATGGAGT	58.746	47.619	0.00	0.00	42.00	3.85
179	180	3.000727	GTTGTTTCCTACCGTCATGGAG	58.999	50.000	0.00	0.00	42.00	3.86
180	181	2.289819	GGTTGTTTCCTACCGTCATGGA	60.290	50.000	0.00	0.00	42.00	3.41
181	182	2.081462	GGTTGTTTCCTACCGTCATGG	58.919	52.381	0.00	0.00	46.41	3.66
182	183	2.081462	GGGTTGTTTCCTACCGTCATG	58.919	52.381	0.00	0.00	37.35	3.07
183	184	1.982958	AGGGTTGTTTCCTACCGTCAT	59.017	47.619	0.00	0.00	37.35	3.06
184	185	1.426751	AGGGTTGTTTCCTACCGTCA	58.573	50.000	0.00	0.00	37.35	4.35
185	186	2.964740	GTAGGGTTGTTTCCTACCGTC	58.035	52.381	8.64	0.00	46.75	4.79
190	191	0.614812	GGCGGTAGGGTTGTTTCCTA	59.385	55.000	0.00	0.00	35.92	2.94
191	192	1.377612	GGCGGTAGGGTTGTTTCCT	59.622	57.895	0.00	0.00	38.36	3.36
192	193	0.537828	TTGGCGGTAGGGTTGTTTCC	60.538	55.000	0.00	0.00	0.00	3.13
193	194	1.001048	GTTTGGCGGTAGGGTTGTTTC	60.001	52.381	0.00	0.00	0.00	2.78
194	195	1.034356	GTTTGGCGGTAGGGTTGTTT	58.966	50.000	0.00	0.00	0.00	2.83
195	196	0.106619	TGTTTGGCGGTAGGGTTGTT	60.107	50.000	0.00	0.00	0.00	2.83
196	197	0.106619	TTGTTTGGCGGTAGGGTTGT	60.107	50.000	0.00	0.00	0.00	3.32
197	198	1.033574	TTTGTTTGGCGGTAGGGTTG	58.966	50.000	0.00	0.00	0.00	3.77
198	199	1.034356	GTTTGTTTGGCGGTAGGGTT	58.966	50.000	0.00	0.00	0.00	4.11
199	200	0.184211	AGTTTGTTTGGCGGTAGGGT	59.816	50.000	0.00	0.00	0.00	4.34
200	201	0.596082	CAGTTTGTTTGGCGGTAGGG	59.404	55.000	0.00	0.00	0.00	3.53
201	202	1.265905	GTCAGTTTGTTTGGCGGTAGG	59.734	52.381	0.00	0.00	0.00	3.18
202	203	1.070175	CGTCAGTTTGTTTGGCGGTAG	60.070	52.381	0.00	0.00	39.79	3.18
203	204	0.938713	CGTCAGTTTGTTTGGCGGTA	59.061	50.000	0.00	0.00	39.79	4.02
204	205	1.725066	CGTCAGTTTGTTTGGCGGT	59.275	52.632	0.00	0.00	39.79	5.68
205	206	4.607024	CGTCAGTTTGTTTGGCGG	57.393	55.556	0.00	0.00	39.79	6.13
206	207	0.938713	TACCGTCAGTTTGTTTGGCG	59.061	50.000	0.00	0.00	42.86	5.69
207	208	1.334689	GCTACCGTCAGTTTGTTTGGC	60.335	52.381	0.00	0.00	0.00	4.52
208	209	1.265905	GGCTACCGTCAGTTTGTTTGG	59.734	52.381	0.00	0.00	0.00	3.28
209	210	2.032030	CAGGCTACCGTCAGTTTGTTTG	60.032	50.000	0.00	0.00	0.00	2.93
210	211	2.218603	CAGGCTACCGTCAGTTTGTTT	58.781	47.619	0.00	0.00	0.00	2.83
211	212	1.140252	ACAGGCTACCGTCAGTTTGTT	59.860	47.619	0.00	0.00	0.00	2.83
212	213	0.756903	ACAGGCTACCGTCAGTTTGT	59.243	50.000	0.00	0.00	0.00	2.83
213	214	2.736144	TACAGGCTACCGTCAGTTTG	57.264	50.000	0.00	0.00	0.00	2.93
214	215	3.181478	GCTATACAGGCTACCGTCAGTTT	60.181	47.826	0.00	0.00	0.00	2.66
215	216	2.361438	GCTATACAGGCTACCGTCAGTT	59.639	50.000	0.00	0.00	0.00	3.16
216	217	1.955080	GCTATACAGGCTACCGTCAGT	59.045	52.381	0.00	0.00	0.00	3.41
217	218	1.269998	GGCTATACAGGCTACCGTCAG	59.730	57.143	0.00	0.00	43.88	3.51
218	219	1.325355	GGCTATACAGGCTACCGTCA	58.675	55.000	0.00	0.00	43.88	4.35
227	228	1.045407	TGGCGGTAAGGCTATACAGG	58.955	55.000	0.00	0.00	46.88	4.00
228	229	1.602165	CGTGGCGGTAAGGCTATACAG	60.602	57.143	0.00	0.00	46.88	2.74
229	230	0.386476	CGTGGCGGTAAGGCTATACA	59.614	55.000	0.00	0.00	46.88	2.29
230	231	0.319297	CCGTGGCGGTAAGGCTATAC	60.319	60.000	0.00	0.00	46.88	1.47
231	232	1.466025	CCCGTGGCGGTAAGGCTATA	61.466	60.000	6.82	0.00	46.80	1.31
232	233	2.803817	CCCGTGGCGGTAAGGCTAT	61.804	63.158	6.82	0.00	46.80	2.97
233	234	3.463585	CCCGTGGCGGTAAGGCTA	61.464	66.667	6.82	0.00	46.80	3.93
236	237	4.462280	GGACCCGTGGCGGTAAGG	62.462	72.222	6.82	0.00	46.80	2.69
237	238	3.659089	CTGGACCCGTGGCGGTAAG	62.659	68.421	6.82	0.00	46.80	2.34
238	239	3.697747	CTGGACCCGTGGCGGTAA	61.698	66.667	6.82	0.00	46.80	2.85
244	245	4.143333	CTACCGCTGGACCCGTGG	62.143	72.222	13.53	13.53	38.02	4.94
245	246	4.143333	CCTACCGCTGGACCCGTG	62.143	72.222	1.50	0.00	0.00	4.94
248	249	3.480133	ATGCCTACCGCTGGACCC	61.480	66.667	1.50	0.00	38.78	4.46
249	250	2.203070	CATGCCTACCGCTGGACC	60.203	66.667	1.50	0.00	38.78	4.46
250	251	1.227380	CTCATGCCTACCGCTGGAC	60.227	63.158	1.50	0.00	38.78	4.02
251	252	3.094062	GCTCATGCCTACCGCTGGA	62.094	63.158	1.50	0.00	38.78	3.86
252	253	2.590007	GCTCATGCCTACCGCTGG	60.590	66.667	0.00	0.00	38.78	4.85
253	254	1.227764	ATGCTCATGCCTACCGCTG	60.228	57.895	0.00	0.00	38.78	5.18
254	255	1.227764	CATGCTCATGCCTACCGCT	60.228	57.895	0.00	0.00	38.78	5.52
255	256	3.337619	CATGCTCATGCCTACCGC	58.662	61.111	0.00	0.00	38.71	5.68
263	264	2.030628	TGAAACACAGTGCATGCTCATG	60.031	45.455	20.33	18.61	41.60	3.07
264	265	2.232399	TGAAACACAGTGCATGCTCAT	58.768	42.857	20.33	4.96	0.00	2.90
265	266	1.677942	TGAAACACAGTGCATGCTCA	58.322	45.000	20.33	8.59	0.00	4.26
266	267	3.438087	AGTATGAAACACAGTGCATGCTC	59.562	43.478	20.33	15.94	29.59	4.26
267	268	3.415212	AGTATGAAACACAGTGCATGCT	58.585	40.909	20.33	2.60	0.00	3.79
268	269	3.837213	AGTATGAAACACAGTGCATGC	57.163	42.857	11.82	11.82	0.00	4.06
269	270	6.726258	TCTAAGTATGAAACACAGTGCATG	57.274	37.500	0.00	0.00	0.00	4.06
270	271	7.744087	TTTCTAAGTATGAAACACAGTGCAT	57.256	32.000	0.00	0.00	0.00	3.96
271	272	7.561021	TTTTCTAAGTATGAAACACAGTGCA	57.439	32.000	0.00	0.00	0.00	4.57
296	297	2.553172	TGCACGCCTTACCGTAATTTTT	59.447	40.909	0.00	0.00	39.83	1.94
297	298	2.152830	TGCACGCCTTACCGTAATTTT	58.847	42.857	0.00	0.00	39.83	1.82
298	299	1.810959	TGCACGCCTTACCGTAATTT	58.189	45.000	0.00	0.00	39.83	1.82
299	300	1.465777	GTTGCACGCCTTACCGTAATT	59.534	47.619	0.00	0.00	39.83	1.40
300	301	1.081094	GTTGCACGCCTTACCGTAAT	58.919	50.000	0.00	0.00	39.83	1.89
301	302	0.033781	AGTTGCACGCCTTACCGTAA	59.966	50.000	0.00	0.00	39.83	3.18
302	303	0.388907	GAGTTGCACGCCTTACCGTA	60.389	55.000	0.00	0.00	39.83	4.02
303	304	1.666872	GAGTTGCACGCCTTACCGT	60.667	57.895	0.00	0.00	43.11	4.83
304	305	0.108992	TAGAGTTGCACGCCTTACCG	60.109	55.000	0.00	0.00	0.00	4.02
305	306	1.356938	GTAGAGTTGCACGCCTTACC	58.643	55.000	0.00	0.00	0.00	2.85
306	307	1.337447	TGGTAGAGTTGCACGCCTTAC	60.337	52.381	0.00	0.00	0.00	2.34
307	308	0.970640	TGGTAGAGTTGCACGCCTTA	59.029	50.000	0.00	0.00	0.00	2.69
308	309	0.602905	GTGGTAGAGTTGCACGCCTT	60.603	55.000	0.00	0.00	0.00	4.35
309	310	1.004918	GTGGTAGAGTTGCACGCCT	60.005	57.895	0.00	0.00	0.00	5.52
310	311	2.033194	GGTGGTAGAGTTGCACGCC	61.033	63.158	0.00	0.00	0.00	5.68
311	312	1.291877	CTGGTGGTAGAGTTGCACGC	61.292	60.000	0.00	0.00	0.00	5.34
312	313	0.670546	CCTGGTGGTAGAGTTGCACG	60.671	60.000	0.00	0.00	0.00	5.34
313	314	0.321653	CCCTGGTGGTAGAGTTGCAC	60.322	60.000	0.00	0.00	0.00	4.57
314	315	0.472925	TCCCTGGTGGTAGAGTTGCA	60.473	55.000	0.00	0.00	34.77	4.08
315	316	0.036294	GTCCCTGGTGGTAGAGTTGC	60.036	60.000	0.00	0.00	34.77	4.17
316	317	0.613777	GGTCCCTGGTGGTAGAGTTG	59.386	60.000	0.00	0.00	34.77	3.16
317	318	0.492276	AGGTCCCTGGTGGTAGAGTT	59.508	55.000	0.00	0.00	34.77	3.01
318	319	0.492276	AAGGTCCCTGGTGGTAGAGT	59.508	55.000	0.00	0.00	34.77	3.24
319	320	0.905357	CAAGGTCCCTGGTGGTAGAG	59.095	60.000	0.00	0.00	34.77	2.43
320	321	0.546747	CCAAGGTCCCTGGTGGTAGA	60.547	60.000	0.00	0.00	34.77	2.59
321	322	1.991230	CCAAGGTCCCTGGTGGTAG	59.009	63.158	0.00	0.00	34.77	3.18
322	323	2.228480	GCCAAGGTCCCTGGTGGTA	61.228	63.158	8.38	0.00	33.43	3.25
323	324	3.580319	GCCAAGGTCCCTGGTGGT	61.580	66.667	8.38	0.00	33.43	4.16
324	325	3.579302	TGCCAAGGTCCCTGGTGG	61.579	66.667	8.38	4.66	0.00	4.61
325	326	1.488705	TAGTGCCAAGGTCCCTGGTG	61.489	60.000	8.38	0.00	0.00	4.17
326	327	1.151899	TAGTGCCAAGGTCCCTGGT	60.152	57.895	8.38	0.00	0.00	4.00
327	328	1.604378	CTAGTGCCAAGGTCCCTGG	59.396	63.158	1.59	1.59	0.00	4.45
328	329	1.604378	CCTAGTGCCAAGGTCCCTG	59.396	63.158	0.00	0.00	0.00	4.45
329	330	2.301738	GCCTAGTGCCAAGGTCCCT	61.302	63.158	0.00	0.00	36.43	4.20
330	331	2.258748	GAGCCTAGTGCCAAGGTCCC	62.259	65.000	0.21	0.00	42.71	4.46
331	332	1.222113	GAGCCTAGTGCCAAGGTCC	59.778	63.158	0.21	0.00	42.71	4.46
332	333	0.615850	AAGAGCCTAGTGCCAAGGTC	59.384	55.000	0.21	0.00	42.71	3.85
333	334	1.952621	TAAGAGCCTAGTGCCAAGGT	58.047	50.000	0.21	0.00	42.71	3.50
334	335	3.244249	GGTATAAGAGCCTAGTGCCAAGG	60.244	52.174	0.21	0.00	42.71	3.61
335	336	3.244249	GGGTATAAGAGCCTAGTGCCAAG	60.244	52.174	0.21	0.00	42.96	3.61
336	337	2.704065	GGGTATAAGAGCCTAGTGCCAA	59.296	50.000	0.21	0.00	42.96	4.52
337	338	2.326428	GGGTATAAGAGCCTAGTGCCA	58.674	52.381	0.21	0.00	42.96	4.92
345	346	8.068080	AGTCTATGACGATAGGGTATAAGAGCC	61.068	44.444	0.00	0.00	40.86	4.70
346	347	6.824704	AGTCTATGACGATAGGGTATAAGAGC	59.175	42.308	0.00	0.00	43.77	4.09
347	348	8.262227	AGAGTCTATGACGATAGGGTATAAGAG	58.738	40.741	0.00	0.00	43.77	2.85
348	349	8.041919	CAGAGTCTATGACGATAGGGTATAAGA	58.958	40.741	0.00	0.00	43.77	2.10
349	350	8.041919	TCAGAGTCTATGACGATAGGGTATAAG	58.958	40.741	0.00	0.00	43.77	1.73
350	351	7.823310	GTCAGAGTCTATGACGATAGGGTATAA	59.177	40.741	11.65	0.00	37.88	0.98
351	352	7.329499	GTCAGAGTCTATGACGATAGGGTATA	58.671	42.308	11.65	0.00	37.88	1.47
352	353	6.174760	GTCAGAGTCTATGACGATAGGGTAT	58.825	44.000	11.65	0.00	37.88	2.73
353	354	5.549347	GTCAGAGTCTATGACGATAGGGTA	58.451	45.833	11.65	0.00	37.88	3.69
354	355	4.391155	GTCAGAGTCTATGACGATAGGGT	58.609	47.826	11.65	0.00	37.88	4.34
362	363	5.814764	TTCTTACCGTCAGAGTCTATGAC	57.185	43.478	16.18	16.18	42.94	3.06
363	364	6.829229	TTTTCTTACCGTCAGAGTCTATGA	57.171	37.500	0.00	0.00	0.00	2.15
364	365	7.545965	ACATTTTTCTTACCGTCAGAGTCTATG	59.454	37.037	0.00	0.00	0.00	2.23
365	366	7.612677	ACATTTTTCTTACCGTCAGAGTCTAT	58.387	34.615	0.00	0.00	0.00	1.98
366	367	6.989659	ACATTTTTCTTACCGTCAGAGTCTA	58.010	36.000	0.00	0.00	0.00	2.59
367	368	5.855045	ACATTTTTCTTACCGTCAGAGTCT	58.145	37.500	0.00	0.00	0.00	3.24
368	369	6.541111	AACATTTTTCTTACCGTCAGAGTC	57.459	37.500	0.00	0.00	0.00	3.36
369	370	7.439381	TCTAACATTTTTCTTACCGTCAGAGT	58.561	34.615	0.00	0.00	0.00	3.24
370	371	7.884816	TCTAACATTTTTCTTACCGTCAGAG	57.115	36.000	0.00	0.00	0.00	3.35
371	372	8.311836	AGATCTAACATTTTTCTTACCGTCAGA	58.688	33.333	0.00	0.00	0.00	3.27
372	373	8.480643	AGATCTAACATTTTTCTTACCGTCAG	57.519	34.615	0.00	0.00	0.00	3.51
373	374	8.092068	TGAGATCTAACATTTTTCTTACCGTCA	58.908	33.333	0.00	0.00	0.00	4.35
374	375	8.475331	TGAGATCTAACATTTTTCTTACCGTC	57.525	34.615	0.00	0.00	0.00	4.79
375	376	8.842358	TTGAGATCTAACATTTTTCTTACCGT	57.158	30.769	0.00	0.00	0.00	4.83
393	394	9.807649	ACCATAGTTTGCAAATATTTTGAGATC	57.192	29.630	16.21	0.00	0.00	2.75
394	395	9.807649	GACCATAGTTTGCAAATATTTTGAGAT	57.192	29.630	16.21	0.00	0.00	2.75
395	396	8.801299	TGACCATAGTTTGCAAATATTTTGAGA	58.199	29.630	16.21	0.00	0.00	3.27
396	397	8.984891	TGACCATAGTTTGCAAATATTTTGAG	57.015	30.769	16.21	2.88	0.00	3.02
397	398	8.801299	TCTGACCATAGTTTGCAAATATTTTGA	58.199	29.630	16.21	3.77	0.00	2.69
398	399	8.984891	TCTGACCATAGTTTGCAAATATTTTG	57.015	30.769	16.21	9.35	0.00	2.44
399	400	9.807649	GATCTGACCATAGTTTGCAAATATTTT	57.192	29.630	16.21	0.00	0.00	1.82
400	401	9.193806	AGATCTGACCATAGTTTGCAAATATTT	57.806	29.630	16.21	4.59	0.00	1.40
401	402	8.757982	AGATCTGACCATAGTTTGCAAATATT	57.242	30.769	16.21	7.06	0.00	1.28
402	403	9.499479	CTAGATCTGACCATAGTTTGCAAATAT	57.501	33.333	16.21	9.95	0.00	1.28
403	404	8.704668	TCTAGATCTGACCATAGTTTGCAAATA	58.295	33.333	16.21	9.17	0.00	1.40
404	405	7.497249	GTCTAGATCTGACCATAGTTTGCAAAT	59.503	37.037	16.21	7.20	0.00	2.32
405	406	6.818644	GTCTAGATCTGACCATAGTTTGCAAA	59.181	38.462	8.05	8.05	0.00	3.68
406	407	6.155221	AGTCTAGATCTGACCATAGTTTGCAA	59.845	38.462	16.74	0.00	35.21	4.08
407	408	5.658634	AGTCTAGATCTGACCATAGTTTGCA	59.341	40.000	16.74	0.00	35.21	4.08
408	409	6.155475	AGTCTAGATCTGACCATAGTTTGC	57.845	41.667	16.74	0.00	35.21	3.68
409	410	8.908903	AGTTAGTCTAGATCTGACCATAGTTTG	58.091	37.037	16.74	0.00	35.21	2.93
410	411	9.482175	AAGTTAGTCTAGATCTGACCATAGTTT	57.518	33.333	16.74	4.82	35.21	2.66
411	412	9.482175	AAAGTTAGTCTAGATCTGACCATAGTT	57.518	33.333	16.74	10.94	35.21	2.24
412	413	9.127277	GAAAGTTAGTCTAGATCTGACCATAGT	57.873	37.037	16.74	5.84	35.21	2.12
413	414	9.126151	TGAAAGTTAGTCTAGATCTGACCATAG	57.874	37.037	16.74	2.45	35.21	2.23
414	415	9.126151	CTGAAAGTTAGTCTAGATCTGACCATA	57.874	37.037	16.74	6.15	35.21	2.74
415	416	7.836685	TCTGAAAGTTAGTCTAGATCTGACCAT	59.163	37.037	16.74	6.87	33.11	3.55
416	417	7.175797	TCTGAAAGTTAGTCTAGATCTGACCA	58.824	38.462	16.74	5.80	33.11	4.02
417	418	7.633193	TCTGAAAGTTAGTCTAGATCTGACC	57.367	40.000	16.74	6.74	33.11	4.02
418	419	9.915629	TTTTCTGAAAGTTAGTCTAGATCTGAC	57.084	33.333	5.18	10.89	33.76	3.51
420	421	9.364989	CCTTTTCTGAAAGTTAGTCTAGATCTG	57.635	37.037	5.18	0.00	40.53	2.90
421	422	8.536175	CCCTTTTCTGAAAGTTAGTCTAGATCT	58.464	37.037	0.00	0.00	40.53	2.75
422	423	8.315482	ACCCTTTTCTGAAAGTTAGTCTAGATC	58.685	37.037	2.75	0.00	40.53	2.75
423	424	8.208575	ACCCTTTTCTGAAAGTTAGTCTAGAT	57.791	34.615	2.75	0.00	40.53	1.98
424	425	7.289317	TGACCCTTTTCTGAAAGTTAGTCTAGA	59.711	37.037	17.55	0.00	40.53	2.43
425	426	7.442656	TGACCCTTTTCTGAAAGTTAGTCTAG	58.557	38.462	17.55	6.69	40.53	2.43
426	427	7.369551	TGACCCTTTTCTGAAAGTTAGTCTA	57.630	36.000	17.55	8.20	40.53	2.59
427	428	6.248569	TGACCCTTTTCTGAAAGTTAGTCT	57.751	37.500	17.55	0.00	40.53	3.24
428	429	6.937436	TTGACCCTTTTCTGAAAGTTAGTC	57.063	37.500	2.75	9.45	40.53	2.59
429	430	7.177744	TGTTTTGACCCTTTTCTGAAAGTTAGT	59.822	33.333	2.75	0.68	40.53	2.24
430	431	7.543756	TGTTTTGACCCTTTTCTGAAAGTTAG	58.456	34.615	2.75	0.00	40.53	2.34
431	432	7.469537	TGTTTTGACCCTTTTCTGAAAGTTA	57.530	32.000	2.75	0.00	40.53	2.24
432	433	6.353404	TGTTTTGACCCTTTTCTGAAAGTT	57.647	33.333	2.75	0.00	40.53	2.66
433	434	5.993748	TGTTTTGACCCTTTTCTGAAAGT	57.006	34.783	2.75	0.00	40.53	2.66
434	435	6.572519	TCATGTTTTGACCCTTTTCTGAAAG	58.427	36.000	2.75	0.00	41.56	2.62
435	436	6.537453	TCATGTTTTGACCCTTTTCTGAAA	57.463	33.333	0.00	0.00	0.00	2.69
436	437	6.537453	TTCATGTTTTGACCCTTTTCTGAA	57.463	33.333	0.00	0.00	32.84	3.02
437	438	6.537453	TTTCATGTTTTGACCCTTTTCTGA	57.463	33.333	0.00	0.00	32.84	3.27
438	439	7.790823	AATTTCATGTTTTGACCCTTTTCTG	57.209	32.000	0.00	0.00	32.84	3.02
439	440	9.546428	CTAAATTTCATGTTTTGACCCTTTTCT	57.454	29.630	0.00	0.00	32.84	2.52
440	441	8.282592	GCTAAATTTCATGTTTTGACCCTTTTC	58.717	33.333	0.00	0.00	32.84	2.29
441	442	7.228507	GGCTAAATTTCATGTTTTGACCCTTTT	59.771	33.333	0.00	0.00	32.84	2.27
442	443	6.710295	GGCTAAATTTCATGTTTTGACCCTTT	59.290	34.615	0.00	0.00	32.84	3.11
443	444	6.230472	GGCTAAATTTCATGTTTTGACCCTT	58.770	36.000	0.00	0.00	32.84	3.95
444	445	5.279960	GGGCTAAATTTCATGTTTTGACCCT	60.280	40.000	0.00	0.00	34.63	4.34
445	446	4.935205	GGGCTAAATTTCATGTTTTGACCC	59.065	41.667	0.00	7.93	34.63	4.46
446	447	5.408299	GTGGGCTAAATTTCATGTTTTGACC	59.592	40.000	6.65	6.65	39.13	4.02
447	448	5.408299	GGTGGGCTAAATTTCATGTTTTGAC	59.592	40.000	0.00	0.00	32.84	3.18
448	449	5.070981	TGGTGGGCTAAATTTCATGTTTTGA	59.929	36.000	0.00	0.00	0.00	2.69
449	450	5.303971	TGGTGGGCTAAATTTCATGTTTTG	58.696	37.500	0.00	0.00	0.00	2.44
450	451	5.559148	TGGTGGGCTAAATTTCATGTTTT	57.441	34.783	0.00	0.00	0.00	2.43
451	452	5.248020	TCATGGTGGGCTAAATTTCATGTTT	59.752	36.000	11.37	0.00	34.11	2.83
452	453	4.776837	TCATGGTGGGCTAAATTTCATGTT	59.223	37.500	11.37	0.00	34.11	2.71
453	454	4.352009	TCATGGTGGGCTAAATTTCATGT	58.648	39.130	11.37	0.00	34.11	3.21
454	455	5.294356	CATCATGGTGGGCTAAATTTCATG	58.706	41.667	0.00	0.72	33.83	3.07
455	456	4.202284	GCATCATGGTGGGCTAAATTTCAT	60.202	41.667	8.33	0.00	0.00	2.57
456	457	3.132646	GCATCATGGTGGGCTAAATTTCA	59.867	43.478	8.33	0.00	0.00	2.69
457	458	3.721035	GCATCATGGTGGGCTAAATTTC	58.279	45.455	8.33	0.00	0.00	2.17
458	459	2.101249	CGCATCATGGTGGGCTAAATTT	59.899	45.455	10.39	0.00	0.00	1.82
459	460	1.682854	CGCATCATGGTGGGCTAAATT	59.317	47.619	10.39	0.00	0.00	1.82
460	461	1.321474	CGCATCATGGTGGGCTAAAT	58.679	50.000	10.39	0.00	0.00	1.40
461	462	0.034574	ACGCATCATGGTGGGCTAAA	60.035	50.000	21.93	0.00	35.65	1.85
462	463	0.747644	CACGCATCATGGTGGGCTAA	60.748	55.000	21.93	0.00	35.65	3.09
463	464	1.153188	CACGCATCATGGTGGGCTA	60.153	57.895	21.93	0.00	35.65	3.93
464	465	2.438975	CACGCATCATGGTGGGCT	60.439	61.111	21.93	7.51	35.65	5.19
465	466	2.438254	TCACGCATCATGGTGGGC	60.438	61.111	21.93	0.11	35.65	5.36
466	467	1.377072	TGTCACGCATCATGGTGGG	60.377	57.895	20.58	20.58	37.97	4.61
467	468	0.954938	TGTGTCACGCATCATGGTGG	60.955	55.000	8.33	0.32	34.93	4.61
468	469	1.089112	ATGTGTCACGCATCATGGTG	58.911	50.000	0.10	0.10	35.50	4.17
469	470	1.825090	AATGTGTCACGCATCATGGT	58.175	45.000	3.81	0.00	33.13	3.55
470	471	2.421073	AGAAATGTGTCACGCATCATGG	59.579	45.455	3.81	0.00	33.13	3.66
471	472	3.486375	GGAGAAATGTGTCACGCATCATG	60.486	47.826	3.81	0.00	33.13	3.07
474	475	1.061131	CGGAGAAATGTGTCACGCATC	59.939	52.381	3.81	0.00	33.13	3.91
478	479	1.635663	GCCCGGAGAAATGTGTCACG	61.636	60.000	0.73	0.00	0.00	4.35
484	485	1.219935	GTACGGCCCGGAGAAATGT	59.780	57.895	8.57	0.00	0.00	2.71
497	498	1.433879	CGGCAAGAGAGGAGTACGG	59.566	63.158	0.00	0.00	0.00	4.02
563	566	4.410400	GACGGGAGGCCACAAGGG	62.410	72.222	5.01	0.00	40.85	3.95
604	607	2.807045	GCAGTGGACAGAGCGTCG	60.807	66.667	0.00	0.00	46.42	5.12
613	616	3.050275	GCAAGGACGGCAGTGGAC	61.050	66.667	0.00	0.00	0.00	4.02
616	619	3.114616	CTCGCAAGGACGGCAGTG	61.115	66.667	0.00	0.00	38.47	3.66
618	621	2.507992	CTCTCGCAAGGACGGCAG	60.508	66.667	0.00	0.00	38.47	4.85
631	634	1.671979	TTGCAGCCATGTATGCTCTC	58.328	50.000	17.31	3.57	42.98	3.20
632	635	2.158652	AGATTGCAGCCATGTATGCTCT	60.159	45.455	17.31	11.30	42.98	4.09
633	636	2.228059	AGATTGCAGCCATGTATGCTC	58.772	47.619	17.31	9.62	42.98	4.26
635	638	3.144506	AGTAGATTGCAGCCATGTATGC	58.855	45.455	11.41	11.41	42.86	3.14
636	639	3.431233	CGAGTAGATTGCAGCCATGTATG	59.569	47.826	0.00	0.00	0.00	2.39
637	640	3.555795	CCGAGTAGATTGCAGCCATGTAT	60.556	47.826	0.00	0.00	0.00	2.29
657	660	3.294493	CAGTTTGGCCACCACCCG	61.294	66.667	3.88	0.00	30.78	5.28
660	663	3.615709	GCCCAGTTTGGCCACCAC	61.616	66.667	3.88	5.33	46.11	4.16
730	733	2.459421	CTAGCTACCCGCGTCGATGG	62.459	65.000	4.92	0.00	45.59	3.51
764	767	7.448161	TGAAATTCATCTGCATTATTATCCCGT	59.552	33.333	0.00	0.00	0.00	5.28
783	786	2.223112	ACACGATCGCATGCTGAAATTC	60.223	45.455	16.60	8.48	0.00	2.17
823	826	2.047939	GGGCTGCAACCAATGTGC	60.048	61.111	8.71	0.00	0.00	4.57
881	884	1.180456	TACTTCCTCAACACGGGCGA	61.180	55.000	0.00	0.00	0.00	5.54
882	885	0.320073	TTACTTCCTCAACACGGGCG	60.320	55.000	0.00	0.00	0.00	6.13
883	886	1.270678	ACTTACTTCCTCAACACGGGC	60.271	52.381	0.00	0.00	0.00	6.13
884	887	2.413837	CACTTACTTCCTCAACACGGG	58.586	52.381	0.00	0.00	0.00	5.28
887	890	3.467803	ACTGCACTTACTTCCTCAACAC	58.532	45.455	0.00	0.00	0.00	3.32
888	891	3.838244	ACTGCACTTACTTCCTCAACA	57.162	42.857	0.00	0.00	0.00	3.33
1063	1099	4.500116	GACGAGCCAGGAGCCGAC	62.500	72.222	0.00	0.00	45.47	4.79
1139	1175	1.682684	GGAGGAGAGGAGGCACGAA	60.683	63.158	0.00	0.00	0.00	3.85
1142	1178	1.760480	GGAGGAGGAGAGGAGGCAC	60.760	68.421	0.00	0.00	0.00	5.01
1143	1179	1.938596	AGGAGGAGGAGAGGAGGCA	60.939	63.158	0.00	0.00	0.00	4.75
1146	1182	1.421646	GAGAGAGGAGGAGGAGAGGAG	59.578	61.905	0.00	0.00	0.00	3.69
1147	1183	1.010793	AGAGAGAGGAGGAGGAGAGGA	59.989	57.143	0.00	0.00	0.00	3.71
1148	1184	1.421646	GAGAGAGAGGAGGAGGAGAGG	59.578	61.905	0.00	0.00	0.00	3.69
1149	1185	2.370189	GAGAGAGAGAGGAGGAGGAGAG	59.630	59.091	0.00	0.00	0.00	3.20
1150	1186	2.293519	TGAGAGAGAGAGGAGGAGGAGA	60.294	54.545	0.00	0.00	0.00	3.71
1151	1187	2.126882	TGAGAGAGAGAGGAGGAGGAG	58.873	57.143	0.00	0.00	0.00	3.69
1152	1188	1.843851	GTGAGAGAGAGAGGAGGAGGA	59.156	57.143	0.00	0.00	0.00	3.71
1153	1189	1.133792	GGTGAGAGAGAGAGGAGGAGG	60.134	61.905	0.00	0.00	0.00	4.30
1164	1200	3.487711	CCGATTCAGTTACGGTGAGAGAG	60.488	52.174	0.00	0.00	41.47	3.20
1171	1207	0.171903	CGACCCGATTCAGTTACGGT	59.828	55.000	0.00	0.00	44.34	4.83
1186	1228	3.413558	GTGAAACAATATTGCGTCGACC	58.586	45.455	15.48	3.43	36.32	4.79
1197	1239	5.563867	GCAAAATCAGTCCGGTGAAACAATA	60.564	40.000	0.00	0.00	39.98	1.90
1205	1247	1.466167	CTCTGCAAAATCAGTCCGGTG	59.534	52.381	0.00	0.00	35.63	4.94
1207	1249	1.089920	CCTCTGCAAAATCAGTCCGG	58.910	55.000	0.00	0.00	35.63	5.14
1240	1282	2.033757	AGAGCCTGCAGGTGCTTG	59.966	61.111	32.81	7.85	42.66	4.01
1424	1466	7.736447	ATGGTTAATCTAGATGTGCTTTAGC	57.264	36.000	5.86	0.00	42.50	3.09
1441	1483	9.899661	ACTTAGATGTGCAATACTTATGGTTAA	57.100	29.630	0.00	0.00	0.00	2.01
1442	1484	9.542462	GACTTAGATGTGCAATACTTATGGTTA	57.458	33.333	0.00	0.00	0.00	2.85
1443	1485	7.499232	GGACTTAGATGTGCAATACTTATGGTT	59.501	37.037	0.00	0.00	0.00	3.67
1444	1486	6.992715	GGACTTAGATGTGCAATACTTATGGT	59.007	38.462	0.00	0.00	0.00	3.55
1445	1487	7.220030	AGGACTTAGATGTGCAATACTTATGG	58.780	38.462	0.00	0.00	0.00	2.74
1446	1488	9.197694	GTAGGACTTAGATGTGCAATACTTATG	57.802	37.037	0.00	0.00	0.00	1.90
1447	1489	9.148879	AGTAGGACTTAGATGTGCAATACTTAT	57.851	33.333	0.00	0.00	0.00	1.73
1448	1490	8.534954	AGTAGGACTTAGATGTGCAATACTTA	57.465	34.615	0.00	0.00	0.00	2.24
1449	1491	7.425224	AGTAGGACTTAGATGTGCAATACTT	57.575	36.000	0.00	0.00	0.00	2.24
1450	1492	8.534954	TTAGTAGGACTTAGATGTGCAATACT	57.465	34.615	0.00	0.00	0.00	2.12
1451	1493	8.414778	ACTTAGTAGGACTTAGATGTGCAATAC	58.585	37.037	0.00	0.00	30.12	1.89
1452	1494	8.534954	ACTTAGTAGGACTTAGATGTGCAATA	57.465	34.615	0.00	0.00	30.12	1.90
1453	1495	7.124298	TGACTTAGTAGGACTTAGATGTGCAAT	59.876	37.037	0.00	0.00	30.12	3.56
1454	1496	6.436218	TGACTTAGTAGGACTTAGATGTGCAA	59.564	38.462	0.00	0.00	30.12	4.08
1455	1497	5.949952	TGACTTAGTAGGACTTAGATGTGCA	59.050	40.000	0.00	0.00	30.12	4.57
1456	1498	6.452494	TGACTTAGTAGGACTTAGATGTGC	57.548	41.667	0.00	0.00	30.12	4.57
1457	1499	8.687242	TCAATGACTTAGTAGGACTTAGATGTG	58.313	37.037	0.00	0.00	30.12	3.21
1458	1500	8.824756	TCAATGACTTAGTAGGACTTAGATGT	57.175	34.615	0.00	0.00	30.12	3.06
1461	1503	8.622157	CGAATCAATGACTTAGTAGGACTTAGA	58.378	37.037	0.00	0.00	30.12	2.10
1462	1504	8.407064	ACGAATCAATGACTTAGTAGGACTTAG	58.593	37.037	0.00	0.00	31.66	2.18
1463	1505	8.188799	CACGAATCAATGACTTAGTAGGACTTA	58.811	37.037	0.00	0.00	0.00	2.24
1464	1506	7.036220	CACGAATCAATGACTTAGTAGGACTT	58.964	38.462	0.00	0.00	0.00	3.01
1465	1507	6.153000	ACACGAATCAATGACTTAGTAGGACT	59.847	38.462	0.00	0.00	0.00	3.85
1466	1508	6.253727	CACACGAATCAATGACTTAGTAGGAC	59.746	42.308	0.00	0.00	0.00	3.85
1467	1509	6.330278	CACACGAATCAATGACTTAGTAGGA	58.670	40.000	0.00	0.00	0.00	2.94
1468	1510	5.520288	CCACACGAATCAATGACTTAGTAGG	59.480	44.000	0.00	0.00	0.00	3.18
1469	1511	6.330278	TCCACACGAATCAATGACTTAGTAG	58.670	40.000	0.00	0.00	0.00	2.57
1470	1512	6.275494	TCCACACGAATCAATGACTTAGTA	57.725	37.500	0.00	0.00	0.00	1.82
1471	1513	5.147330	TCCACACGAATCAATGACTTAGT	57.853	39.130	0.00	0.00	0.00	2.24
1472	1514	7.953158	ATATCCACACGAATCAATGACTTAG	57.047	36.000	0.00	0.00	0.00	2.18
1473	1515	8.731275	AAATATCCACACGAATCAATGACTTA	57.269	30.769	0.00	0.00	0.00	2.24
1474	1516	7.630242	AAATATCCACACGAATCAATGACTT	57.370	32.000	0.00	0.00	0.00	3.01
1475	1517	7.630242	AAAATATCCACACGAATCAATGACT	57.370	32.000	0.00	0.00	0.00	3.41
1503	1545	9.533253	CAAGCATAAGAAGAAAAAGAAAAGGAA	57.467	29.630	0.00	0.00	0.00	3.36
1504	1546	8.912988	TCAAGCATAAGAAGAAAAAGAAAAGGA	58.087	29.630	0.00	0.00	0.00	3.36
1505	1547	9.702494	ATCAAGCATAAGAAGAAAAAGAAAAGG	57.298	29.630	0.00	0.00	0.00	3.11
1509	1551	9.903682	CTCAATCAAGCATAAGAAGAAAAAGAA	57.096	29.630	0.00	0.00	0.00	2.52
1510	1552	9.071276	ACTCAATCAAGCATAAGAAGAAAAAGA	57.929	29.630	0.00	0.00	0.00	2.52
1511	1553	9.125906	CACTCAATCAAGCATAAGAAGAAAAAG	57.874	33.333	0.00	0.00	0.00	2.27
1512	1554	8.849168	TCACTCAATCAAGCATAAGAAGAAAAA	58.151	29.630	0.00	0.00	0.00	1.94
1513	1555	8.394971	TCACTCAATCAAGCATAAGAAGAAAA	57.605	30.769	0.00	0.00	0.00	2.29
1514	1556	7.984422	TCACTCAATCAAGCATAAGAAGAAA	57.016	32.000	0.00	0.00	0.00	2.52
1515	1557	8.571461	AATCACTCAATCAAGCATAAGAAGAA	57.429	30.769	0.00	0.00	0.00	2.52
1516	1558	8.571461	AAATCACTCAATCAAGCATAAGAAGA	57.429	30.769	0.00	0.00	0.00	2.87
1517	1559	9.932699	CTAAATCACTCAATCAAGCATAAGAAG	57.067	33.333	0.00	0.00	0.00	2.85
1518	1560	9.671279	TCTAAATCACTCAATCAAGCATAAGAA	57.329	29.630	0.00	0.00	0.00	2.52
1519	1561	9.842775	ATCTAAATCACTCAATCAAGCATAAGA	57.157	29.630	0.00	0.00	0.00	2.10
1520	1562	9.880064	CATCTAAATCACTCAATCAAGCATAAG	57.120	33.333	0.00	0.00	0.00	1.73
1521	1563	9.399797	ACATCTAAATCACTCAATCAAGCATAA	57.600	29.630	0.00	0.00	0.00	1.90
1522	1564	8.833493	CACATCTAAATCACTCAATCAAGCATA	58.167	33.333	0.00	0.00	0.00	3.14
1523	1565	7.681304	GCACATCTAAATCACTCAATCAAGCAT	60.681	37.037	0.00	0.00	0.00	3.79
1524	1566	6.403964	GCACATCTAAATCACTCAATCAAGCA	60.404	38.462	0.00	0.00	0.00	3.91
1525	1567	5.970023	GCACATCTAAATCACTCAATCAAGC	59.030	40.000	0.00	0.00	0.00	4.01
1526	1568	7.080353	TGCACATCTAAATCACTCAATCAAG	57.920	36.000	0.00	0.00	0.00	3.02
1527	1569	7.451501	TTGCACATCTAAATCACTCAATCAA	57.548	32.000	0.00	0.00	0.00	2.57
1528	1570	7.634671	ATTGCACATCTAAATCACTCAATCA	57.365	32.000	0.00	0.00	0.00	2.57
1529	1571	9.443283	GTTATTGCACATCTAAATCACTCAATC	57.557	33.333	0.00	0.00	0.00	2.67
1530	1572	9.182214	AGTTATTGCACATCTAAATCACTCAAT	57.818	29.630	0.00	0.00	0.00	2.57
1531	1573	8.565896	AGTTATTGCACATCTAAATCACTCAA	57.434	30.769	0.00	0.00	0.00	3.02
1532	1574	9.317936	CTAGTTATTGCACATCTAAATCACTCA	57.682	33.333	0.00	0.00	0.00	3.41
1533	1575	8.768955	CCTAGTTATTGCACATCTAAATCACTC	58.231	37.037	0.00	0.00	0.00	3.51
1534	1576	7.716998	CCCTAGTTATTGCACATCTAAATCACT	59.283	37.037	0.00	0.00	0.00	3.41
1535	1577	7.520614	GCCCTAGTTATTGCACATCTAAATCAC	60.521	40.741	0.00	0.00	0.00	3.06
1536	1578	6.486657	GCCCTAGTTATTGCACATCTAAATCA	59.513	38.462	0.00	0.00	0.00	2.57
1537	1579	6.712547	AGCCCTAGTTATTGCACATCTAAATC	59.287	38.462	0.00	0.00	0.00	2.17
1538	1580	6.605119	AGCCCTAGTTATTGCACATCTAAAT	58.395	36.000	0.00	0.00	0.00	1.40
1539	1581	6.001449	AGCCCTAGTTATTGCACATCTAAA	57.999	37.500	0.00	0.00	0.00	1.85
1540	1582	5.630415	AGCCCTAGTTATTGCACATCTAA	57.370	39.130	0.00	0.00	0.00	2.10
1541	1583	6.075315	TCTAGCCCTAGTTATTGCACATCTA	58.925	40.000	2.53	0.00	34.84	1.98
1542	1584	4.901849	TCTAGCCCTAGTTATTGCACATCT	59.098	41.667	2.53	0.00	34.84	2.90
1543	1585	5.215252	TCTAGCCCTAGTTATTGCACATC	57.785	43.478	2.53	0.00	34.84	3.06
1544	1586	5.072329	ACATCTAGCCCTAGTTATTGCACAT	59.928	40.000	2.53	0.00	34.84	3.21
1545	1587	4.408921	ACATCTAGCCCTAGTTATTGCACA	59.591	41.667	2.53	0.00	34.84	4.57
1546	1588	4.752101	CACATCTAGCCCTAGTTATTGCAC	59.248	45.833	2.53	0.00	34.84	4.57
1547	1589	4.743651	GCACATCTAGCCCTAGTTATTGCA	60.744	45.833	2.53	0.00	34.84	4.08
1548	1590	3.748568	GCACATCTAGCCCTAGTTATTGC	59.251	47.826	2.53	4.46	34.84	3.56
1549	1591	4.319177	GGCACATCTAGCCCTAGTTATTG	58.681	47.826	2.53	0.90	46.50	1.90
1550	1592	4.625607	GGCACATCTAGCCCTAGTTATT	57.374	45.455	2.53	0.00	46.50	1.40
1560	1602	1.535437	GCAATGCTTGGCACATCTAGC	60.535	52.381	0.00	1.19	43.04	3.42
1561	1603	2.486951	GCAATGCTTGGCACATCTAG	57.513	50.000	0.00	0.00	43.04	2.43
1571	1613	2.994143	CTATGGCGCGGCAATGCTTG	62.994	60.000	39.24	19.44	0.00	4.01
1572	1614	2.828095	TATGGCGCGGCAATGCTT	60.828	55.556	39.24	24.42	0.00	3.91
1573	1615	3.282157	CTATGGCGCGGCAATGCT	61.282	61.111	39.24	24.82	0.00	3.79
1574	1616	2.988942	GAACTATGGCGCGGCAATGC	62.989	60.000	39.24	22.02	0.00	3.56
1604	1646	2.233186	TCAGACTCTGCAGTGATGGAAG	59.767	50.000	21.96	8.69	30.63	3.46
1647	1689	0.635731	GCGTCGATCGAACACAGAAG	59.364	55.000	21.31	5.23	42.86	2.85
1655	1697	0.520619	CTCGTTCTGCGTCGATCGAA	60.521	55.000	21.31	3.23	42.86	3.71
1724	1766	3.482783	GCTTGACGCCGCTGTCTC	61.483	66.667	13.80	3.53	39.64	3.36
1863	1913	5.584253	AGTAGCATCTACAATTCAGACGT	57.416	39.130	6.74	0.00	0.00	4.34
1865	1915	7.334421	TCCAAAAGTAGCATCTACAATTCAGAC	59.666	37.037	6.74	0.00	0.00	3.51
1867	1917	7.335422	AGTCCAAAAGTAGCATCTACAATTCAG	59.665	37.037	6.74	0.18	0.00	3.02
1869	1919	7.617041	AGTCCAAAAGTAGCATCTACAATTC	57.383	36.000	6.74	0.00	0.00	2.17
1872	1922	7.119262	GCTTAAGTCCAAAAGTAGCATCTACAA	59.881	37.037	4.02	0.00	0.00	2.41
1873	1923	6.594159	GCTTAAGTCCAAAAGTAGCATCTACA	59.406	38.462	4.02	0.00	0.00	2.74
1874	1924	6.594159	TGCTTAAGTCCAAAAGTAGCATCTAC	59.406	38.462	4.02	0.00	32.73	2.59
1906	1972	3.434984	GCAATTCAGACAGAGGAAGTGAC	59.565	47.826	6.07	0.00	40.45	3.67
2154	2222	0.788995	CAACTCAGCAGCAGAAGACG	59.211	55.000	0.00	0.00	0.00	4.18
2252	2320	1.337823	ACGAAGAAGGGTTCCATGTCG	60.338	52.381	0.00	0.00	0.00	4.35
2282	2350	0.737715	GTGCCACATCTCTGACGTCC	60.738	60.000	14.12	0.00	0.00	4.79
2402	2470	1.283905	ACCGGGAATTCAGGGTAAAGG	59.716	52.381	19.30	8.11	0.00	3.11
2467	2535	7.559486	AGATTATTAGAACACTGCATCTGACA	58.441	34.615	0.00	0.00	0.00	3.58
2468	2536	8.333908	CAAGATTATTAGAACACTGCATCTGAC	58.666	37.037	0.00	0.00	0.00	3.51
2489	2557	7.521871	AGTGAAAAGAAGAAATCAGCAAGAT	57.478	32.000	0.00	0.00	39.09	2.40
2490	2558	6.949352	AGTGAAAAGAAGAAATCAGCAAGA	57.051	33.333	0.00	0.00	0.00	3.02
2491	2559	7.198390	TGAAGTGAAAAGAAGAAATCAGCAAG	58.802	34.615	0.00	0.00	0.00	4.01
2551	2619	1.446272	CTTGGACGGAGCCTTCGAC	60.446	63.158	0.00	0.00	0.00	4.20
2554	2622	2.115343	ATTTCTTGGACGGAGCCTTC	57.885	50.000	0.00	0.00	0.00	3.46
2573	2641	0.724549	CGAACGCCCAAATCGATCAA	59.275	50.000	0.00	0.00	38.82	2.57
2581	2649	1.728672	GGTGAAACGAACGCCCAAA	59.271	52.632	0.00	0.00	38.12	3.28
2636	7972	5.757808	GCTAGATTTCTCCTTTGCTCCTTAG	59.242	44.000	0.00	0.00	0.00	2.18
2721	8057	4.379813	CGGCAGTTCATACAGCAGAATTTT	60.380	41.667	0.00	0.00	38.43	1.82
2722	8058	3.127548	CGGCAGTTCATACAGCAGAATTT	59.872	43.478	0.00	0.00	38.43	1.82
2723	8059	2.679837	CGGCAGTTCATACAGCAGAATT	59.320	45.455	0.00	0.00	38.43	2.17
2724	8060	2.283298	CGGCAGTTCATACAGCAGAAT	58.717	47.619	0.00	0.00	38.43	2.40
2752	8090	7.585579	ACATGCATTATTGATCATGGTTACA	57.414	32.000	0.00	0.00	40.26	2.41
2829	8167	2.726821	TGATGATGCTTGGTTCCTTCC	58.273	47.619	0.00	0.00	0.00	3.46
2853	8191	4.320608	TTTTCAGATGTTCCTTGTTGCC	57.679	40.909	0.00	0.00	0.00	4.52
2894	8232	8.507524	ACTTGTTTCCTTTCTATTATGCTACC	57.492	34.615	0.00	0.00	0.00	3.18
2934	8272	6.739331	TCCCCTATTTCTTTTGCTTTGAAA	57.261	33.333	0.00	0.00	34.75	2.69
3106	8447	9.353999	GTATAACATTTCAATTGTGTTTCTCCC	57.646	33.333	15.55	1.21	37.30	4.30
3135	8476	8.493607	TGTGTTTTGAGATCCTATATGAATCCA	58.506	33.333	0.00	0.00	0.00	3.41
3170	8511	4.202121	GCACCATCTAAAGACATCGGTAGA	60.202	45.833	0.00	0.00	0.00	2.59
3249	8715	2.585330	TGAATGTCCAATGCACACACT	58.415	42.857	0.00	0.00	0.00	3.55
3252	8718	3.742369	CCTTTTGAATGTCCAATGCACAC	59.258	43.478	0.00	0.00	0.00	3.82
3350	8816	4.500716	GGTCACGGGATTTGTGTTGAAAAT	60.501	41.667	0.00	0.00	38.48	1.82
3353	8819	1.950909	GGTCACGGGATTTGTGTTGAA	59.049	47.619	0.00	0.00	38.48	2.69
3359	8825	1.420138	ACTTCAGGTCACGGGATTTGT	59.580	47.619	0.00	0.00	0.00	2.83
3406	8873	6.509418	TCATAGGAAATTTTCAGGGTTTCG	57.491	37.500	11.09	0.00	33.72	3.46
3478	8945	6.187682	TGAAATCTTGGGACCTCTTTATTCC	58.812	40.000	0.00	0.00	0.00	3.01
3533	9000	2.061773	CACTGATCGACAACACCAGAC	58.938	52.381	0.00	0.00	0.00	3.51
3584	9051	8.782144	GCAATATTTTCCCAAAACAAAGAATGA	58.218	29.630	0.00	0.00	32.37	2.57
3585	9052	8.785946	AGCAATATTTTCCCAAAACAAAGAATG	58.214	29.630	0.00	0.00	32.37	2.67
3586	9053	8.922931	AGCAATATTTTCCCAAAACAAAGAAT	57.077	26.923	0.00	0.00	32.37	2.40
3588	9055	7.734942	AGAGCAATATTTTCCCAAAACAAAGA	58.265	30.769	0.00	0.00	32.37	2.52
3589	9056	7.967890	AGAGCAATATTTTCCCAAAACAAAG	57.032	32.000	0.00	0.00	32.37	2.77
3607	9074	5.941058	TCCATTATTGGTTTACGAAGAGCAA	59.059	36.000	3.65	0.00	44.06	3.91
3616	9083	9.281075	GTACGTCAAAATCCATTATTGGTTTAC	57.719	33.333	0.00	0.00	44.06	2.01

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.