Multiple sequence alignment - TraesCS3A01G346200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G346200 chr3A 100.000 2627 0 0 1 2627 595450782 595453408 0.000000e+00 4852
1 TraesCS3A01G346200 chr3B 92.857 1344 68 14 677 2014 595303840 595305161 0.000000e+00 1925
2 TraesCS3A01G346200 chr3B 88.079 302 14 8 1 289 595302240 595302532 3.240000e-89 339
3 TraesCS3A01G346200 chr3B 90.226 133 9 3 542 670 595303664 595303796 1.250000e-38 171
4 TraesCS3A01G346200 chr3D 93.804 1275 50 15 685 1946 453127820 453129078 0.000000e+00 1890
5 TraesCS3A01G346200 chr3D 83.066 561 35 26 1 542 453125482 453126001 3.080000e-124 455
6 TraesCS3A01G346200 chr3D 88.235 119 11 2 542 657 453126966 453127084 3.530000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G346200 chr3A 595450782 595453408 2626 False 4852.000000 4852 100.000000 1 2627 1 chr3A.!!$F1 2626
1 TraesCS3A01G346200 chr3B 595302240 595305161 2921 False 811.666667 1925 90.387333 1 2014 3 chr3B.!!$F1 2013
2 TraesCS3A01G346200 chr3D 453125482 453129078 3596 False 828.000000 1890 88.368333 1 1946 3 chr3D.!!$F1 1945

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
898 3431 0.03601 ACCATCCTTCACTCCAAGCG 60.036 55.0 0.0 0.0 0.0 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2047 4593 0.032217 ATTGAATGCCCCCGTTCCAT 60.032 50.0 0.0 0.0 36.37 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.330306 CGATTTTGAAACAGCCGCAG 58.670 50.000 0.00 0.00 0.00 5.18
53 55 3.498774 ATGATATCCCACCTGCAGTTC 57.501 47.619 13.81 0.00 0.00 3.01
62 64 2.094390 CCACCTGCAGTTCCATCAAATG 60.094 50.000 13.81 0.00 32.95 2.32
63 65 2.559668 CACCTGCAGTTCCATCAAATGT 59.440 45.455 13.81 0.00 32.37 2.71
96 103 0.324943 AGCAGGCTAACCGACACATT 59.675 50.000 0.00 0.00 42.76 2.71
198 208 2.540101 CGGCTGTCGGTTTCATCTATTC 59.460 50.000 0.00 0.00 34.75 1.75
238 258 4.567959 GGTAAGCAAATTCATCATTGTGCC 59.432 41.667 0.00 0.00 33.10 5.01
245 265 5.607939 AATTCATCATTGTGCCATGACAT 57.392 34.783 0.00 0.00 0.00 3.06
283 303 1.385743 GCTAGTCGCGTGTGTAACTTG 59.614 52.381 5.77 3.12 38.04 3.16
300 1116 3.230134 ACTTGGCTAATTTGGAAGTGCA 58.770 40.909 0.00 0.00 0.00 4.57
334 1150 2.024176 TGGCCGCTTAAGATTCTCAC 57.976 50.000 6.67 0.00 0.00 3.51
335 1151 1.277842 TGGCCGCTTAAGATTCTCACA 59.722 47.619 6.67 0.00 0.00 3.58
336 1152 1.666189 GGCCGCTTAAGATTCTCACAC 59.334 52.381 6.67 0.00 0.00 3.82
337 1153 2.346803 GCCGCTTAAGATTCTCACACA 58.653 47.619 6.67 0.00 0.00 3.72
360 1176 2.280389 CCGCCACATGATCTCCCG 60.280 66.667 0.00 0.00 0.00 5.14
364 1180 1.718757 GCCACATGATCTCCCGTTGC 61.719 60.000 0.00 0.00 0.00 4.17
374 1190 0.168128 CTCCCGTTGCATTTCCGTTC 59.832 55.000 0.00 0.00 0.00 3.95
375 1191 1.211709 CCCGTTGCATTTCCGTTCC 59.788 57.895 0.00 0.00 0.00 3.62
376 1192 1.241315 CCCGTTGCATTTCCGTTCCT 61.241 55.000 0.00 0.00 0.00 3.36
380 1196 2.724174 CGTTGCATTTCCGTTCCTTTTC 59.276 45.455 0.00 0.00 0.00 2.29
391 1207 3.551551 CGTTCCTTTTCCAATCGTGAAC 58.448 45.455 0.00 0.00 0.00 3.18
425 1241 3.074412 GTCGGACACCAACATCTTTCAT 58.926 45.455 2.62 0.00 0.00 2.57
428 1244 5.180492 GTCGGACACCAACATCTTTCATTTA 59.820 40.000 2.62 0.00 0.00 1.40
435 1275 9.685276 ACACCAACATCTTTCATTTATATCTGA 57.315 29.630 0.00 0.00 0.00 3.27
457 1297 6.849502 TGATAAACGAGTGACCTAACTAGTG 58.150 40.000 0.00 0.00 36.33 2.74
491 1331 1.271817 TGTAGCAATGTGTGGGCATCA 60.272 47.619 0.00 0.00 0.00 3.07
503 1351 1.843206 TGGGCATCATGCTAGGTACAA 59.157 47.619 10.11 0.00 44.28 2.41
505 1353 1.867233 GGCATCATGCTAGGTACAACG 59.133 52.381 10.11 0.00 44.28 4.10
511 1360 2.288961 TGCTAGGTACAACGCTTAGC 57.711 50.000 0.00 0.00 0.00 3.09
554 2369 6.707599 AACTCGAGTTATAGAACAAGCAAC 57.292 37.500 28.80 0.00 38.10 4.17
566 2381 5.162075 AGAACAAGCAACGTCTACTCATAC 58.838 41.667 0.00 0.00 0.00 2.39
574 2389 4.634184 ACGTCTACTCATACGAAAGCAT 57.366 40.909 1.45 0.00 41.55 3.79
577 2392 5.147865 CGTCTACTCATACGAAAGCATAGG 58.852 45.833 0.00 0.00 41.55 2.57
580 2395 4.755266 ACTCATACGAAAGCATAGGGTT 57.245 40.909 0.00 0.00 35.98 4.11
660 3153 2.091541 ACTTTTGACGGCATGGTATGG 58.908 47.619 0.00 0.00 0.00 2.74
773 3303 0.169009 GACAAGTGGCGCTGGATTTC 59.831 55.000 9.96 0.00 0.00 2.17
832 3365 0.395173 AACCAAACCACCAAGCGAGT 60.395 50.000 0.00 0.00 0.00 4.18
833 3366 0.818040 ACCAAACCACCAAGCGAGTC 60.818 55.000 0.00 0.00 0.00 3.36
834 3367 0.535102 CCAAACCACCAAGCGAGTCT 60.535 55.000 0.00 0.00 0.00 3.24
835 3368 0.868406 CAAACCACCAAGCGAGTCTC 59.132 55.000 0.00 0.00 0.00 3.36
836 3369 0.600255 AAACCACCAAGCGAGTCTCG 60.600 55.000 18.08 18.08 43.89 4.04
890 3423 3.871594 GCTACATGTGTACCATCCTTCAC 59.128 47.826 9.11 0.00 0.00 3.18
897 3430 2.027192 TGTACCATCCTTCACTCCAAGC 60.027 50.000 0.00 0.00 0.00 4.01
898 3431 0.036010 ACCATCCTTCACTCCAAGCG 60.036 55.000 0.00 0.00 0.00 4.68
980 3514 3.894947 GGCTCCGGAGAGACGAGC 61.895 72.222 35.69 18.26 43.39 5.03
981 3515 3.894947 GCTCCGGAGAGACGAGCC 61.895 72.222 35.69 10.76 43.39 4.70
982 3516 2.438614 CTCCGGAGAGACGAGCCA 60.439 66.667 28.21 0.00 43.39 4.75
983 3517 2.438614 TCCGGAGAGACGAGCCAG 60.439 66.667 0.00 0.00 35.47 4.85
984 3518 2.752238 CCGGAGAGACGAGCCAGT 60.752 66.667 0.00 0.00 35.47 4.00
1278 3812 2.759973 TCCTACCTGCTCCGCCAG 60.760 66.667 0.00 0.00 0.00 4.85
1302 3839 3.799755 GGCATCAACGTGTCCCGC 61.800 66.667 0.00 0.00 41.42 6.13
1348 3885 2.125106 GGTACAGGCTCAAGCGGG 60.125 66.667 0.00 0.00 43.26 6.13
1680 4220 3.225940 GGAGCCATCAAAGGGGATTAAG 58.774 50.000 0.00 0.00 0.00 1.85
1718 4258 8.689972 ACTGCGGTTTGTTAGTATTACTACTAT 58.310 33.333 2.98 0.00 39.58 2.12
1756 4302 5.892160 ATGATGATTGTGAAAGGTGTCAG 57.108 39.130 0.00 0.00 0.00 3.51
1788 4334 5.023533 AGTTCTCTGCAGACTTGTTTACA 57.976 39.130 13.74 0.00 0.00 2.41
1792 4338 5.050490 TCTCTGCAGACTTGTTTACAGTTC 58.950 41.667 13.74 0.00 0.00 3.01
1837 4383 3.260884 TGTTGTTGCCTAGTCTTAGGGAG 59.739 47.826 3.02 0.00 46.55 4.30
1857 4403 5.193679 GGAGCTTGTCATTACTGGGTTAAT 58.806 41.667 0.00 0.00 0.00 1.40
1863 4409 6.019779 TGTCATTACTGGGTTAATTTGTGC 57.980 37.500 0.00 0.00 0.00 4.57
1932 4478 8.321353 GTTTTCAAAGGGGAAGATCCAATTTAT 58.679 33.333 0.00 0.00 38.64 1.40
1933 4479 7.660030 TTCAAAGGGGAAGATCCAATTTATC 57.340 36.000 0.00 0.00 38.64 1.75
1938 4484 3.829026 GGGAAGATCCAATTTATCCAGGC 59.171 47.826 0.00 0.00 38.64 4.85
1939 4485 4.473444 GGAAGATCCAATTTATCCAGGCA 58.527 43.478 0.00 0.00 36.28 4.75
1941 4487 4.803329 AGATCCAATTTATCCAGGCACT 57.197 40.909 0.00 0.00 43.88 4.40
1952 4498 4.164258 AGGCACTGCTTGGTTCAC 57.836 55.556 0.00 0.00 37.18 3.18
1956 4502 1.536709 GGCACTGCTTGGTTCACTTTG 60.537 52.381 0.00 0.00 0.00 2.77
1957 4503 1.134946 GCACTGCTTGGTTCACTTTGT 59.865 47.619 0.00 0.00 0.00 2.83
1958 4504 2.357637 GCACTGCTTGGTTCACTTTGTA 59.642 45.455 0.00 0.00 0.00 2.41
1964 4510 3.572255 GCTTGGTTCACTTTGTATTCCCA 59.428 43.478 0.00 0.00 0.00 4.37
1966 4512 3.142951 TGGTTCACTTTGTATTCCCACG 58.857 45.455 0.00 0.00 0.00 4.94
2014 4560 1.486310 TCCTCCCGTCCAAATCATCTG 59.514 52.381 0.00 0.00 0.00 2.90
2015 4561 1.475751 CCTCCCGTCCAAATCATCTGG 60.476 57.143 0.00 0.00 35.05 3.86
2016 4562 1.210478 CTCCCGTCCAAATCATCTGGT 59.790 52.381 0.00 0.00 35.30 4.00
2017 4563 1.065491 TCCCGTCCAAATCATCTGGTG 60.065 52.381 0.00 0.00 35.30 4.17
2018 4564 1.065491 CCCGTCCAAATCATCTGGTGA 60.065 52.381 0.00 0.00 42.06 4.02
2035 4581 3.241067 GTGATTAAGTACTCACCGCCA 57.759 47.619 0.00 0.00 36.59 5.69
2036 4582 2.928116 GTGATTAAGTACTCACCGCCAC 59.072 50.000 0.00 0.00 36.59 5.01
2037 4583 2.190981 GATTAAGTACTCACCGCCACG 58.809 52.381 0.00 0.00 0.00 4.94
2038 4584 1.246649 TTAAGTACTCACCGCCACGA 58.753 50.000 0.00 0.00 0.00 4.35
2039 4585 0.523072 TAAGTACTCACCGCCACGAC 59.477 55.000 0.00 0.00 0.00 4.34
2040 4586 1.457823 AAGTACTCACCGCCACGACA 61.458 55.000 0.00 0.00 0.00 4.35
2041 4587 1.007038 GTACTCACCGCCACGACAA 60.007 57.895 0.00 0.00 0.00 3.18
2042 4588 1.007336 GTACTCACCGCCACGACAAG 61.007 60.000 0.00 0.00 0.00 3.16
2043 4589 1.174078 TACTCACCGCCACGACAAGA 61.174 55.000 0.00 0.00 0.00 3.02
2044 4590 1.300620 CTCACCGCCACGACAAGAA 60.301 57.895 0.00 0.00 0.00 2.52
2045 4591 0.670546 CTCACCGCCACGACAAGAAT 60.671 55.000 0.00 0.00 0.00 2.40
2046 4592 0.250124 TCACCGCCACGACAAGAATT 60.250 50.000 0.00 0.00 0.00 2.17
2047 4593 1.001068 TCACCGCCACGACAAGAATTA 59.999 47.619 0.00 0.00 0.00 1.40
2048 4594 2.006888 CACCGCCACGACAAGAATTAT 58.993 47.619 0.00 0.00 0.00 1.28
2049 4595 2.006888 ACCGCCACGACAAGAATTATG 58.993 47.619 0.00 0.00 0.00 1.90
2050 4596 1.330521 CCGCCACGACAAGAATTATGG 59.669 52.381 0.00 0.00 0.00 2.74
2051 4597 2.276201 CGCCACGACAAGAATTATGGA 58.724 47.619 0.00 0.00 0.00 3.41
2052 4598 2.675844 CGCCACGACAAGAATTATGGAA 59.324 45.455 0.00 0.00 0.00 3.53
2053 4599 3.485216 CGCCACGACAAGAATTATGGAAC 60.485 47.826 0.00 0.00 0.00 3.62
2054 4600 3.485216 GCCACGACAAGAATTATGGAACG 60.485 47.826 0.00 0.00 0.00 3.95
2055 4601 3.063452 CCACGACAAGAATTATGGAACGG 59.937 47.826 0.00 0.00 0.00 4.44
2056 4602 3.063452 CACGACAAGAATTATGGAACGGG 59.937 47.826 0.00 0.00 0.00 5.28
2057 4603 2.612212 CGACAAGAATTATGGAACGGGG 59.388 50.000 0.00 0.00 0.00 5.73
2058 4604 2.949644 GACAAGAATTATGGAACGGGGG 59.050 50.000 0.00 0.00 0.00 5.40
2059 4605 1.681264 CAAGAATTATGGAACGGGGGC 59.319 52.381 0.00 0.00 0.00 5.80
2060 4606 0.923358 AGAATTATGGAACGGGGGCA 59.077 50.000 0.00 0.00 0.00 5.36
2061 4607 1.499007 AGAATTATGGAACGGGGGCAT 59.501 47.619 0.00 0.00 0.00 4.40
2062 4608 2.091333 AGAATTATGGAACGGGGGCATT 60.091 45.455 0.00 0.00 0.00 3.56
2063 4609 1.995376 ATTATGGAACGGGGGCATTC 58.005 50.000 0.00 0.00 0.00 2.67
2064 4610 0.626382 TTATGGAACGGGGGCATTCA 59.374 50.000 0.00 0.00 0.00 2.57
2065 4611 0.626382 TATGGAACGGGGGCATTCAA 59.374 50.000 0.00 0.00 0.00 2.69
2066 4612 0.032217 ATGGAACGGGGGCATTCAAT 60.032 50.000 0.00 0.00 0.00 2.57
2067 4613 0.626382 TGGAACGGGGGCATTCAATA 59.374 50.000 0.00 0.00 0.00 1.90
2068 4614 1.318576 GGAACGGGGGCATTCAATAG 58.681 55.000 0.00 0.00 0.00 1.73
2069 4615 1.318576 GAACGGGGGCATTCAATAGG 58.681 55.000 0.00 0.00 0.00 2.57
2070 4616 0.923358 AACGGGGGCATTCAATAGGA 59.077 50.000 0.00 0.00 0.00 2.94
2071 4617 0.474184 ACGGGGGCATTCAATAGGAG 59.526 55.000 0.00 0.00 0.00 3.69
2072 4618 0.764890 CGGGGGCATTCAATAGGAGA 59.235 55.000 0.00 0.00 0.00 3.71
2073 4619 1.271054 CGGGGGCATTCAATAGGAGAG 60.271 57.143 0.00 0.00 0.00 3.20
2074 4620 2.057922 GGGGGCATTCAATAGGAGAGA 58.942 52.381 0.00 0.00 0.00 3.10
2075 4621 2.443255 GGGGGCATTCAATAGGAGAGAA 59.557 50.000 0.00 0.00 0.00 2.87
2076 4622 3.497584 GGGGGCATTCAATAGGAGAGAAG 60.498 52.174 0.00 0.00 0.00 2.85
2077 4623 3.137360 GGGGCATTCAATAGGAGAGAAGT 59.863 47.826 0.00 0.00 0.00 3.01
2078 4624 4.348168 GGGGCATTCAATAGGAGAGAAGTA 59.652 45.833 0.00 0.00 0.00 2.24
2079 4625 5.013599 GGGGCATTCAATAGGAGAGAAGTAT 59.986 44.000 0.00 0.00 0.00 2.12
2080 4626 5.936956 GGGCATTCAATAGGAGAGAAGTATG 59.063 44.000 0.00 0.00 0.00 2.39
2081 4627 6.239714 GGGCATTCAATAGGAGAGAAGTATGA 60.240 42.308 0.00 0.00 0.00 2.15
2082 4628 6.873076 GGCATTCAATAGGAGAGAAGTATGAG 59.127 42.308 0.00 0.00 0.00 2.90
2083 4629 6.368516 GCATTCAATAGGAGAGAAGTATGAGC 59.631 42.308 0.00 0.00 0.00 4.26
2084 4630 7.669427 CATTCAATAGGAGAGAAGTATGAGCT 58.331 38.462 0.00 0.00 0.00 4.09
2085 4631 7.667575 TTCAATAGGAGAGAAGTATGAGCTT 57.332 36.000 0.00 0.00 0.00 3.74
2086 4632 7.048629 TCAATAGGAGAGAAGTATGAGCTTG 57.951 40.000 0.00 0.00 0.00 4.01
2087 4633 6.609212 TCAATAGGAGAGAAGTATGAGCTTGT 59.391 38.462 0.00 0.00 0.00 3.16
2088 4634 7.124901 TCAATAGGAGAGAAGTATGAGCTTGTT 59.875 37.037 0.00 0.00 0.00 2.83
2089 4635 8.417106 CAATAGGAGAGAAGTATGAGCTTGTTA 58.583 37.037 0.00 0.00 0.00 2.41
2090 4636 6.859112 AGGAGAGAAGTATGAGCTTGTTAA 57.141 37.500 0.00 0.00 0.00 2.01
2091 4637 6.635755 AGGAGAGAAGTATGAGCTTGTTAAC 58.364 40.000 0.00 0.00 0.00 2.01
2092 4638 5.813157 GGAGAGAAGTATGAGCTTGTTAACC 59.187 44.000 2.48 0.00 0.00 2.85
2093 4639 6.360370 AGAGAAGTATGAGCTTGTTAACCA 57.640 37.500 2.48 0.00 0.00 3.67
2094 4640 6.166982 AGAGAAGTATGAGCTTGTTAACCAC 58.833 40.000 2.48 0.00 0.00 4.16
2095 4641 5.246307 AGAAGTATGAGCTTGTTAACCACC 58.754 41.667 2.48 0.00 0.00 4.61
2096 4642 4.634012 AGTATGAGCTTGTTAACCACCA 57.366 40.909 2.48 0.00 0.00 4.17
2097 4643 4.324267 AGTATGAGCTTGTTAACCACCAC 58.676 43.478 2.48 0.00 0.00 4.16
2098 4644 3.508845 ATGAGCTTGTTAACCACCACT 57.491 42.857 2.48 0.00 0.00 4.00
2099 4645 3.290948 TGAGCTTGTTAACCACCACTT 57.709 42.857 2.48 0.00 0.00 3.16
2100 4646 3.626930 TGAGCTTGTTAACCACCACTTT 58.373 40.909 2.48 0.00 0.00 2.66
2101 4647 4.020543 TGAGCTTGTTAACCACCACTTTT 58.979 39.130 2.48 0.00 0.00 2.27
2102 4648 4.142271 TGAGCTTGTTAACCACCACTTTTG 60.142 41.667 2.48 0.00 0.00 2.44
2103 4649 2.863740 GCTTGTTAACCACCACTTTTGC 59.136 45.455 2.48 0.00 0.00 3.68
2104 4650 3.677424 GCTTGTTAACCACCACTTTTGCA 60.677 43.478 2.48 0.00 0.00 4.08
2105 4651 4.692228 CTTGTTAACCACCACTTTTGCAT 58.308 39.130 2.48 0.00 0.00 3.96
2106 4652 4.744795 TGTTAACCACCACTTTTGCATT 57.255 36.364 2.48 0.00 0.00 3.56
2107 4653 5.091261 TGTTAACCACCACTTTTGCATTT 57.909 34.783 2.48 0.00 0.00 2.32
2108 4654 6.222038 TGTTAACCACCACTTTTGCATTTA 57.778 33.333 2.48 0.00 0.00 1.40
2109 4655 6.640518 TGTTAACCACCACTTTTGCATTTAA 58.359 32.000 2.48 0.00 0.00 1.52
2110 4656 7.103641 TGTTAACCACCACTTTTGCATTTAAA 58.896 30.769 2.48 0.00 0.00 1.52
2111 4657 7.770897 TGTTAACCACCACTTTTGCATTTAAAT 59.229 29.630 2.48 0.00 0.00 1.40
2112 4658 6.616774 AACCACCACTTTTGCATTTAAATG 57.383 33.333 21.54 21.54 39.40 2.32
2169 4715 8.803201 ACACTACTCATATACGAAATCACATG 57.197 34.615 0.00 0.00 0.00 3.21
2170 4716 7.867909 ACACTACTCATATACGAAATCACATGG 59.132 37.037 0.00 0.00 0.00 3.66
2171 4717 6.868864 ACTACTCATATACGAAATCACATGGC 59.131 38.462 0.00 0.00 0.00 4.40
2172 4718 4.686091 ACTCATATACGAAATCACATGGCG 59.314 41.667 0.00 0.00 0.00 5.69
2173 4719 3.993736 TCATATACGAAATCACATGGCGG 59.006 43.478 0.00 0.00 0.00 6.13
2174 4720 1.593196 ATACGAAATCACATGGCGGG 58.407 50.000 0.00 0.00 0.00 6.13
2175 4721 0.250793 TACGAAATCACATGGCGGGT 59.749 50.000 0.00 0.00 0.00 5.28
2176 4722 0.250793 ACGAAATCACATGGCGGGTA 59.749 50.000 0.00 0.00 0.00 3.69
2177 4723 1.134220 ACGAAATCACATGGCGGGTAT 60.134 47.619 0.00 0.00 0.00 2.73
2178 4724 1.264020 CGAAATCACATGGCGGGTATG 59.736 52.381 0.00 0.00 0.00 2.39
2179 4725 2.571212 GAAATCACATGGCGGGTATGA 58.429 47.619 0.00 0.00 0.00 2.15
2180 4726 2.957402 AATCACATGGCGGGTATGAT 57.043 45.000 0.00 0.00 0.00 2.45
2181 4727 2.479566 ATCACATGGCGGGTATGATC 57.520 50.000 0.00 0.00 0.00 2.92
2182 4728 0.033366 TCACATGGCGGGTATGATCG 59.967 55.000 0.00 0.00 0.00 3.69
2183 4729 0.033366 CACATGGCGGGTATGATCGA 59.967 55.000 0.00 0.00 0.00 3.59
2184 4730 0.976641 ACATGGCGGGTATGATCGAT 59.023 50.000 0.00 0.00 0.00 3.59
2185 4731 1.338105 ACATGGCGGGTATGATCGATG 60.338 52.381 0.54 0.00 0.00 3.84
2186 4732 0.976641 ATGGCGGGTATGATCGATGT 59.023 50.000 0.54 0.00 0.00 3.06
2187 4733 0.033366 TGGCGGGTATGATCGATGTG 59.967 55.000 0.54 0.00 0.00 3.21
2188 4734 0.317160 GGCGGGTATGATCGATGTGA 59.683 55.000 0.54 0.00 0.00 3.58
2189 4735 1.419374 GCGGGTATGATCGATGTGAC 58.581 55.000 0.54 0.00 0.00 3.67
2190 4736 1.686464 CGGGTATGATCGATGTGACG 58.314 55.000 0.54 0.00 0.00 4.35
2191 4737 1.265905 CGGGTATGATCGATGTGACGA 59.734 52.381 0.54 0.00 46.04 4.20
2192 4738 2.665794 CGGGTATGATCGATGTGACGAG 60.666 54.545 0.54 0.00 45.22 4.18
2193 4739 2.552743 GGGTATGATCGATGTGACGAGA 59.447 50.000 0.54 0.00 45.22 4.04
2194 4740 3.556513 GGTATGATCGATGTGACGAGAC 58.443 50.000 0.54 0.00 45.22 3.36
2195 4741 2.391322 ATGATCGATGTGACGAGACG 57.609 50.000 0.54 0.00 45.22 4.18
2196 4742 1.365699 TGATCGATGTGACGAGACGA 58.634 50.000 0.54 0.00 45.22 4.20
2197 4743 1.327764 TGATCGATGTGACGAGACGAG 59.672 52.381 0.54 0.00 45.22 4.18
2198 4744 1.593469 GATCGATGTGACGAGACGAGA 59.407 52.381 0.54 0.00 45.22 4.04
2199 4745 1.000145 TCGATGTGACGAGACGAGAG 59.000 55.000 0.00 0.00 37.37 3.20
2200 4746 0.722282 CGATGTGACGAGACGAGAGT 59.278 55.000 0.00 0.00 41.08 3.24
2201 4747 1.527995 CGATGTGACGAGACGAGAGTG 60.528 57.143 0.00 0.00 39.22 3.51
2202 4748 3.804449 CGATGTGACGAGACGAGAGTGA 61.804 54.545 0.00 0.00 39.22 3.41
2203 4749 5.815163 CGATGTGACGAGACGAGAGTGAC 62.815 56.522 0.00 0.00 39.22 3.67
2212 4758 4.946411 GAGAGTGACTCGCGTGTT 57.054 55.556 15.72 0.00 35.84 3.32
2213 4759 2.425278 GAGAGTGACTCGCGTGTTG 58.575 57.895 15.72 2.60 35.84 3.33
2214 4760 1.609840 GAGAGTGACTCGCGTGTTGC 61.610 60.000 15.72 10.99 41.47 4.17
2215 4761 1.949133 GAGTGACTCGCGTGTTGCA 60.949 57.895 15.72 6.93 46.97 4.08
2216 4762 1.284982 GAGTGACTCGCGTGTTGCAT 61.285 55.000 15.72 2.34 46.97 3.96
2217 4763 1.154599 GTGACTCGCGTGTTGCATG 60.155 57.895 15.72 0.00 46.97 4.06
2218 4764 1.594021 TGACTCGCGTGTTGCATGT 60.594 52.632 15.72 0.00 46.97 3.21
2219 4765 0.319125 TGACTCGCGTGTTGCATGTA 60.319 50.000 15.72 0.00 46.97 2.29
2220 4766 0.787787 GACTCGCGTGTTGCATGTAA 59.212 50.000 15.72 0.00 46.97 2.41
2221 4767 1.393539 GACTCGCGTGTTGCATGTAAT 59.606 47.619 15.72 0.00 46.97 1.89
2222 4768 2.601314 GACTCGCGTGTTGCATGTAATA 59.399 45.455 15.72 0.00 46.97 0.98
2223 4769 2.997303 ACTCGCGTGTTGCATGTAATAA 59.003 40.909 8.21 0.00 46.97 1.40
2224 4770 3.433957 ACTCGCGTGTTGCATGTAATAAA 59.566 39.130 8.21 0.00 46.97 1.40
2225 4771 3.738399 TCGCGTGTTGCATGTAATAAAC 58.262 40.909 5.77 0.00 46.97 2.01
2226 4772 3.186613 TCGCGTGTTGCATGTAATAAACA 59.813 39.130 5.77 0.00 46.97 2.83
2227 4773 3.296943 CGCGTGTTGCATGTAATAAACAC 59.703 43.478 0.00 9.30 46.97 3.32
2228 4774 4.222886 GCGTGTTGCATGTAATAAACACA 58.777 39.130 20.09 5.78 45.82 3.72
2229 4775 4.320690 GCGTGTTGCATGTAATAAACACAG 59.679 41.667 20.09 15.88 45.82 3.66
2230 4776 5.448438 CGTGTTGCATGTAATAAACACAGT 58.552 37.500 20.09 0.00 45.82 3.55
2231 4777 5.912396 CGTGTTGCATGTAATAAACACAGTT 59.088 36.000 20.09 0.00 45.82 3.16
2232 4778 6.416455 CGTGTTGCATGTAATAAACACAGTTT 59.584 34.615 20.09 0.51 45.82 2.66
2233 4779 7.588123 CGTGTTGCATGTAATAAACACAGTTTA 59.412 33.333 20.09 4.98 45.82 2.01
2234 4780 8.901748 GTGTTGCATGTAATAAACACAGTTTAG 58.098 33.333 17.59 0.00 45.30 1.85
2235 4781 7.593273 TGTTGCATGTAATAAACACAGTTTAGC 59.407 33.333 0.00 5.73 42.09 3.09
2236 4782 7.447374 TGCATGTAATAAACACAGTTTAGCT 57.553 32.000 8.15 0.00 42.09 3.32
2237 4783 8.554835 TGCATGTAATAAACACAGTTTAGCTA 57.445 30.769 8.15 0.00 42.09 3.32
2238 4784 9.004717 TGCATGTAATAAACACAGTTTAGCTAA 57.995 29.630 0.86 0.86 42.09 3.09
2246 4792 7.817418 AAACACAGTTTAGCTAATTCTTGGA 57.183 32.000 7.08 0.00 0.00 3.53
2247 4793 8.409358 AAACACAGTTTAGCTAATTCTTGGAT 57.591 30.769 7.08 0.00 0.00 3.41
2248 4794 7.383102 ACACAGTTTAGCTAATTCTTGGATG 57.617 36.000 7.08 7.25 0.00 3.51
2249 4795 6.127897 ACACAGTTTAGCTAATTCTTGGATGC 60.128 38.462 7.08 0.00 0.00 3.91
2250 4796 6.094603 CACAGTTTAGCTAATTCTTGGATGCT 59.905 38.462 7.08 0.00 34.92 3.79
2251 4797 6.094603 ACAGTTTAGCTAATTCTTGGATGCTG 59.905 38.462 7.08 5.99 32.72 4.41
2252 4798 6.317140 CAGTTTAGCTAATTCTTGGATGCTGA 59.683 38.462 7.08 0.00 32.72 4.26
2253 4799 6.886459 AGTTTAGCTAATTCTTGGATGCTGAA 59.114 34.615 7.08 0.00 32.72 3.02
2254 4800 7.394359 AGTTTAGCTAATTCTTGGATGCTGAAA 59.606 33.333 7.08 0.00 30.24 2.69
2255 4801 5.573337 AGCTAATTCTTGGATGCTGAAAC 57.427 39.130 0.00 0.00 0.00 2.78
2256 4802 5.259632 AGCTAATTCTTGGATGCTGAAACT 58.740 37.500 0.00 0.00 0.00 2.66
2257 4803 5.713861 AGCTAATTCTTGGATGCTGAAACTT 59.286 36.000 0.00 0.00 0.00 2.66
2258 4804 6.210185 AGCTAATTCTTGGATGCTGAAACTTT 59.790 34.615 0.00 0.00 0.00 2.66
2259 4805 6.309737 GCTAATTCTTGGATGCTGAAACTTTG 59.690 38.462 0.00 0.00 0.00 2.77
2260 4806 4.589216 TTCTTGGATGCTGAAACTTTGG 57.411 40.909 0.00 0.00 0.00 3.28
2261 4807 3.565307 TCTTGGATGCTGAAACTTTGGT 58.435 40.909 0.00 0.00 0.00 3.67
2262 4808 4.724399 TCTTGGATGCTGAAACTTTGGTA 58.276 39.130 0.00 0.00 0.00 3.25
2263 4809 5.136828 TCTTGGATGCTGAAACTTTGGTAA 58.863 37.500 0.00 0.00 0.00 2.85
2264 4810 5.596361 TCTTGGATGCTGAAACTTTGGTAAA 59.404 36.000 0.00 0.00 0.00 2.01
2265 4811 6.267471 TCTTGGATGCTGAAACTTTGGTAAAT 59.733 34.615 0.00 0.00 0.00 1.40
2266 4812 6.418057 TGGATGCTGAAACTTTGGTAAATT 57.582 33.333 0.00 0.00 0.00 1.82
2267 4813 6.825610 TGGATGCTGAAACTTTGGTAAATTT 58.174 32.000 0.00 0.00 0.00 1.82
2268 4814 6.928492 TGGATGCTGAAACTTTGGTAAATTTC 59.072 34.615 0.00 0.00 0.00 2.17
2269 4815 6.928492 GGATGCTGAAACTTTGGTAAATTTCA 59.072 34.615 0.00 0.00 38.42 2.69
2270 4816 7.603784 GGATGCTGAAACTTTGGTAAATTTCAT 59.396 33.333 0.00 0.00 39.60 2.57
2271 4817 8.907222 ATGCTGAAACTTTGGTAAATTTCATT 57.093 26.923 0.00 0.00 39.60 2.57
2272 4818 8.364129 TGCTGAAACTTTGGTAAATTTCATTC 57.636 30.769 0.00 0.00 39.60 2.67
2273 4819 7.984050 TGCTGAAACTTTGGTAAATTTCATTCA 59.016 29.630 0.00 0.00 39.60 2.57
2274 4820 8.275632 GCTGAAACTTTGGTAAATTTCATTCAC 58.724 33.333 0.00 0.00 39.60 3.18
2275 4821 8.655651 TGAAACTTTGGTAAATTTCATTCACC 57.344 30.769 0.00 0.00 36.42 4.02
2276 4822 8.482128 TGAAACTTTGGTAAATTTCATTCACCT 58.518 29.630 8.23 0.00 36.42 4.00
2277 4823 9.974980 GAAACTTTGGTAAATTTCATTCACCTA 57.025 29.630 8.23 0.00 32.46 3.08
2288 4834 8.674263 AATTTCATTCACCTAAAATTTGCACA 57.326 26.923 0.00 0.00 29.42 4.57
2289 4835 7.475771 TTTCATTCACCTAAAATTTGCACAC 57.524 32.000 0.00 0.00 0.00 3.82
2290 4836 5.537188 TCATTCACCTAAAATTTGCACACC 58.463 37.500 0.00 0.00 0.00 4.16
2291 4837 5.069648 TCATTCACCTAAAATTTGCACACCA 59.930 36.000 0.00 0.00 0.00 4.17
2292 4838 5.344743 TTCACCTAAAATTTGCACACCAA 57.655 34.783 0.00 0.00 0.00 3.67
2293 4839 5.543507 TCACCTAAAATTTGCACACCAAT 57.456 34.783 0.00 0.00 32.49 3.16
2294 4840 5.923204 TCACCTAAAATTTGCACACCAATT 58.077 33.333 0.00 0.00 32.49 2.32
2295 4841 7.055667 TCACCTAAAATTTGCACACCAATTA 57.944 32.000 0.00 0.00 32.49 1.40
2296 4842 7.500992 TCACCTAAAATTTGCACACCAATTAA 58.499 30.769 0.00 0.00 32.49 1.40
2297 4843 7.439655 TCACCTAAAATTTGCACACCAATTAAC 59.560 33.333 0.00 0.00 32.49 2.01
2298 4844 7.440856 CACCTAAAATTTGCACACCAATTAACT 59.559 33.333 0.00 0.00 32.49 2.24
2299 4845 7.990314 ACCTAAAATTTGCACACCAATTAACTT 59.010 29.630 0.00 0.00 32.49 2.66
2300 4846 8.281893 CCTAAAATTTGCACACCAATTAACTTG 58.718 33.333 0.00 0.00 32.49 3.16
2301 4847 7.856145 AAAATTTGCACACCAATTAACTTGA 57.144 28.000 0.00 0.00 36.97 3.02
2302 4848 7.856145 AAATTTGCACACCAATTAACTTGAA 57.144 28.000 0.00 0.00 36.97 2.69
2303 4849 7.856145 AATTTGCACACCAATTAACTTGAAA 57.144 28.000 0.00 0.00 36.97 2.69
2304 4850 7.856145 ATTTGCACACCAATTAACTTGAAAA 57.144 28.000 0.00 0.00 36.97 2.29
2305 4851 7.856145 TTTGCACACCAATTAACTTGAAAAT 57.144 28.000 0.00 0.00 36.97 1.82
2306 4852 7.475771 TTGCACACCAATTAACTTGAAAATC 57.524 32.000 0.00 0.00 36.97 2.17
2307 4853 5.689514 TGCACACCAATTAACTTGAAAATCG 59.310 36.000 0.00 0.00 36.97 3.34
2308 4854 5.918011 GCACACCAATTAACTTGAAAATCGA 59.082 36.000 0.00 0.00 36.97 3.59
2309 4855 6.419413 GCACACCAATTAACTTGAAAATCGAA 59.581 34.615 0.00 0.00 36.97 3.71
2310 4856 7.116233 GCACACCAATTAACTTGAAAATCGAAT 59.884 33.333 0.00 0.00 36.97 3.34
2311 4857 9.619316 CACACCAATTAACTTGAAAATCGAATA 57.381 29.630 0.00 0.00 36.97 1.75
2321 4867 9.613428 AACTTGAAAATCGAATATCCATAGTGA 57.387 29.630 0.00 0.00 0.00 3.41
2322 4868 9.265901 ACTTGAAAATCGAATATCCATAGTGAG 57.734 33.333 0.00 0.00 0.00 3.51
2323 4869 8.607441 TTGAAAATCGAATATCCATAGTGAGG 57.393 34.615 0.00 0.00 0.00 3.86
2324 4870 7.735917 TGAAAATCGAATATCCATAGTGAGGT 58.264 34.615 0.00 0.00 0.00 3.85
2325 4871 8.210946 TGAAAATCGAATATCCATAGTGAGGTT 58.789 33.333 0.00 0.00 0.00 3.50
2326 4872 9.706691 GAAAATCGAATATCCATAGTGAGGTTA 57.293 33.333 0.00 0.00 0.00 2.85
2327 4873 9.712305 AAAATCGAATATCCATAGTGAGGTTAG 57.288 33.333 0.00 0.00 0.00 2.34
2328 4874 6.835819 TCGAATATCCATAGTGAGGTTAGG 57.164 41.667 0.00 0.00 0.00 2.69
2329 4875 5.715279 TCGAATATCCATAGTGAGGTTAGGG 59.285 44.000 0.00 0.00 0.00 3.53
2330 4876 5.624738 CGAATATCCATAGTGAGGTTAGGGC 60.625 48.000 0.00 0.00 0.00 5.19
2331 4877 2.868964 TCCATAGTGAGGTTAGGGCT 57.131 50.000 0.00 0.00 0.00 5.19
2332 4878 3.130734 TCCATAGTGAGGTTAGGGCTT 57.869 47.619 0.00 0.00 0.00 4.35
2333 4879 2.771943 TCCATAGTGAGGTTAGGGCTTG 59.228 50.000 0.00 0.00 0.00 4.01
2334 4880 2.505819 CCATAGTGAGGTTAGGGCTTGT 59.494 50.000 0.00 0.00 0.00 3.16
2335 4881 3.535561 CATAGTGAGGTTAGGGCTTGTG 58.464 50.000 0.00 0.00 0.00 3.33
2336 4882 1.435256 AGTGAGGTTAGGGCTTGTGT 58.565 50.000 0.00 0.00 0.00 3.72
2337 4883 1.774856 AGTGAGGTTAGGGCTTGTGTT 59.225 47.619 0.00 0.00 0.00 3.32
2338 4884 1.880027 GTGAGGTTAGGGCTTGTGTTG 59.120 52.381 0.00 0.00 0.00 3.33
2339 4885 1.202879 TGAGGTTAGGGCTTGTGTTGG 60.203 52.381 0.00 0.00 0.00 3.77
2340 4886 0.850784 AGGTTAGGGCTTGTGTTGGT 59.149 50.000 0.00 0.00 0.00 3.67
2341 4887 0.958822 GGTTAGGGCTTGTGTTGGTG 59.041 55.000 0.00 0.00 0.00 4.17
2342 4888 1.477923 GGTTAGGGCTTGTGTTGGTGA 60.478 52.381 0.00 0.00 0.00 4.02
2343 4889 2.303175 GTTAGGGCTTGTGTTGGTGAA 58.697 47.619 0.00 0.00 0.00 3.18
2344 4890 1.975660 TAGGGCTTGTGTTGGTGAAC 58.024 50.000 0.00 0.00 0.00 3.18
2345 4891 0.033601 AGGGCTTGTGTTGGTGAACA 60.034 50.000 0.00 0.00 39.88 3.18
2346 4892 1.039856 GGGCTTGTGTTGGTGAACAT 58.960 50.000 0.00 0.00 43.95 2.71
2347 4893 1.000274 GGGCTTGTGTTGGTGAACATC 60.000 52.381 0.00 0.00 43.95 3.06
2348 4894 1.680735 GGCTTGTGTTGGTGAACATCA 59.319 47.619 0.00 0.00 43.95 3.07
2349 4895 2.100584 GGCTTGTGTTGGTGAACATCAA 59.899 45.455 0.00 0.00 43.95 2.57
2350 4896 3.430098 GGCTTGTGTTGGTGAACATCAAA 60.430 43.478 1.96 0.00 43.95 2.69
2351 4897 3.798337 GCTTGTGTTGGTGAACATCAAAG 59.202 43.478 1.96 0.00 43.95 2.77
2352 4898 4.439974 GCTTGTGTTGGTGAACATCAAAGA 60.440 41.667 1.96 0.00 43.95 2.52
2353 4899 5.649557 CTTGTGTTGGTGAACATCAAAGAA 58.350 37.500 1.96 0.00 43.95 2.52
2354 4900 5.651387 TGTGTTGGTGAACATCAAAGAAA 57.349 34.783 1.96 0.00 43.95 2.52
2355 4901 6.030548 TGTGTTGGTGAACATCAAAGAAAA 57.969 33.333 1.96 0.00 43.95 2.29
2356 4902 6.098679 TGTGTTGGTGAACATCAAAGAAAAG 58.901 36.000 1.96 0.00 43.95 2.27
2357 4903 5.519927 GTGTTGGTGAACATCAAAGAAAAGG 59.480 40.000 1.96 0.00 43.95 3.11
2358 4904 4.935352 TGGTGAACATCAAAGAAAAGGG 57.065 40.909 0.00 0.00 0.00 3.95
2359 4905 4.285863 TGGTGAACATCAAAGAAAAGGGT 58.714 39.130 0.00 0.00 0.00 4.34
2360 4906 4.714308 TGGTGAACATCAAAGAAAAGGGTT 59.286 37.500 0.00 0.00 0.00 4.11
2361 4907 5.188751 TGGTGAACATCAAAGAAAAGGGTTT 59.811 36.000 0.00 0.00 0.00 3.27
2362 4908 5.523552 GGTGAACATCAAAGAAAAGGGTTTG 59.476 40.000 0.00 0.00 35.38 2.93
2363 4909 5.006649 GTGAACATCAAAGAAAAGGGTTTGC 59.993 40.000 0.00 0.00 34.29 3.68
2364 4910 5.104982 TGAACATCAAAGAAAAGGGTTTGCT 60.105 36.000 0.00 0.00 34.29 3.91
2365 4911 5.357742 ACATCAAAGAAAAGGGTTTGCTT 57.642 34.783 0.00 0.00 34.29 3.91
2366 4912 5.744171 ACATCAAAGAAAAGGGTTTGCTTT 58.256 33.333 0.24 0.24 34.29 3.51
2367 4913 5.585844 ACATCAAAGAAAAGGGTTTGCTTTG 59.414 36.000 20.26 20.26 39.72 2.77
2368 4914 5.413309 TCAAAGAAAAGGGTTTGCTTTGA 57.587 34.783 23.16 23.16 41.76 2.69
2369 4915 5.988287 TCAAAGAAAAGGGTTTGCTTTGAT 58.012 33.333 23.16 0.00 40.74 2.57
2370 4916 5.816777 TCAAAGAAAAGGGTTTGCTTTGATG 59.183 36.000 23.16 7.41 40.74 3.07
2371 4917 5.612725 AAGAAAAGGGTTTGCTTTGATGA 57.387 34.783 0.00 0.00 0.00 2.92
2372 4918 5.612725 AGAAAAGGGTTTGCTTTGATGAA 57.387 34.783 0.00 0.00 0.00 2.57
2373 4919 5.359756 AGAAAAGGGTTTGCTTTGATGAAC 58.640 37.500 0.00 0.00 0.00 3.18
2374 4920 4.751767 AAAGGGTTTGCTTTGATGAACA 57.248 36.364 0.00 0.00 0.00 3.18
2375 4921 4.961438 AAGGGTTTGCTTTGATGAACAT 57.039 36.364 0.00 0.00 0.00 2.71
2376 4922 4.525912 AGGGTTTGCTTTGATGAACATC 57.474 40.909 7.73 7.73 38.29 3.06
2377 4923 3.896888 AGGGTTTGCTTTGATGAACATCA 59.103 39.130 12.61 12.61 45.30 3.07
2378 4924 3.989817 GGGTTTGCTTTGATGAACATCAC 59.010 43.478 15.68 6.90 46.49 3.06
2379 4925 4.501229 GGGTTTGCTTTGATGAACATCACA 60.501 41.667 15.68 9.65 46.49 3.58
2380 4926 4.682860 GGTTTGCTTTGATGAACATCACAG 59.317 41.667 20.03 20.03 46.49 3.66
2381 4927 5.507817 GGTTTGCTTTGATGAACATCACAGA 60.508 40.000 25.36 11.72 46.49 3.41
2382 4928 5.771153 TTGCTTTGATGAACATCACAGAA 57.229 34.783 25.36 17.19 46.49 3.02
2383 4929 5.771153 TGCTTTGATGAACATCACAGAAA 57.229 34.783 25.36 14.60 46.49 2.52
2384 4930 6.146601 TGCTTTGATGAACATCACAGAAAA 57.853 33.333 25.36 13.63 46.49 2.29
2385 4931 6.571605 TGCTTTGATGAACATCACAGAAAAA 58.428 32.000 25.36 13.10 46.49 1.94
2408 4954 9.822185 AAAAAGTTGCTCTTCTTTCATACAATT 57.178 25.926 0.00 0.00 35.02 2.32
2409 4955 9.822185 AAAAGTTGCTCTTCTTTCATACAATTT 57.178 25.926 0.00 0.00 35.02 1.82
2410 4956 9.822185 AAAGTTGCTCTTCTTTCATACAATTTT 57.178 25.926 0.00 0.00 35.02 1.82
2411 4957 9.822185 AAGTTGCTCTTCTTTCATACAATTTTT 57.178 25.926 0.00 0.00 0.00 1.94
2436 4982 9.550406 TTTCTTCTTCTAAAAATACCGAACTCA 57.450 29.630 0.00 0.00 0.00 3.41
2437 4983 9.550406 TTCTTCTTCTAAAAATACCGAACTCAA 57.450 29.630 0.00 0.00 0.00 3.02
2438 4984 9.720769 TCTTCTTCTAAAAATACCGAACTCAAT 57.279 29.630 0.00 0.00 0.00 2.57
2444 4990 8.662141 TCTAAAAATACCGAACTCAATAGTTGC 58.338 33.333 0.00 0.00 46.09 4.17
2445 4991 6.811253 AAAATACCGAACTCAATAGTTGCA 57.189 33.333 0.00 0.00 46.09 4.08
2446 4992 7.391148 AAAATACCGAACTCAATAGTTGCAT 57.609 32.000 0.00 0.00 46.09 3.96
2447 4993 8.500753 AAAATACCGAACTCAATAGTTGCATA 57.499 30.769 0.00 0.00 46.09 3.14
2448 4994 8.500753 AAATACCGAACTCAATAGTTGCATAA 57.499 30.769 0.00 0.00 46.09 1.90
2449 4995 5.796350 ACCGAACTCAATAGTTGCATAAC 57.204 39.130 0.00 0.00 46.09 1.89
2450 4996 5.242434 ACCGAACTCAATAGTTGCATAACA 58.758 37.500 0.00 0.00 46.09 2.41
2451 4997 5.351465 ACCGAACTCAATAGTTGCATAACAG 59.649 40.000 0.00 0.00 46.09 3.16
2452 4998 5.351465 CCGAACTCAATAGTTGCATAACAGT 59.649 40.000 0.00 0.00 46.09 3.55
2453 4999 6.128282 CCGAACTCAATAGTTGCATAACAGTT 60.128 38.462 0.00 0.00 46.09 3.16
2454 5000 6.955963 CGAACTCAATAGTTGCATAACAGTTC 59.044 38.462 7.91 7.91 46.09 3.01
2455 5001 7.360017 CGAACTCAATAGTTGCATAACAGTTCA 60.360 37.037 14.24 0.00 46.09 3.18
2456 5002 7.928307 ACTCAATAGTTGCATAACAGTTCAT 57.072 32.000 0.00 0.00 39.30 2.57
2457 5003 9.448438 AACTCAATAGTTGCATAACAGTTCATA 57.552 29.630 0.00 0.00 44.40 2.15
2458 5004 8.883731 ACTCAATAGTTGCATAACAGTTCATAC 58.116 33.333 0.00 0.00 39.30 2.39
2459 5005 8.208718 TCAATAGTTGCATAACAGTTCATACC 57.791 34.615 0.00 0.00 39.30 2.73
2460 5006 7.826744 TCAATAGTTGCATAACAGTTCATACCA 59.173 33.333 0.00 0.00 39.30 3.25
2461 5007 8.623903 CAATAGTTGCATAACAGTTCATACCAT 58.376 33.333 0.00 0.00 39.30 3.55
2462 5008 6.683974 AGTTGCATAACAGTTCATACCATC 57.316 37.500 0.00 0.00 39.30 3.51
2463 5009 6.418101 AGTTGCATAACAGTTCATACCATCT 58.582 36.000 0.00 0.00 39.30 2.90
2464 5010 6.886459 AGTTGCATAACAGTTCATACCATCTT 59.114 34.615 0.00 0.00 39.30 2.40
2465 5011 7.394359 AGTTGCATAACAGTTCATACCATCTTT 59.606 33.333 0.00 0.00 39.30 2.52
2466 5012 7.701539 TGCATAACAGTTCATACCATCTTTT 57.298 32.000 0.00 0.00 0.00 2.27
2467 5013 8.800370 TGCATAACAGTTCATACCATCTTTTA 57.200 30.769 0.00 0.00 0.00 1.52
2468 5014 9.407380 TGCATAACAGTTCATACCATCTTTTAT 57.593 29.630 0.00 0.00 0.00 1.40
2469 5015 9.669353 GCATAACAGTTCATACCATCTTTTATG 57.331 33.333 0.00 0.00 35.49 1.90
2479 5025 9.625747 TCATACCATCTTTTATGTTTATGAGCA 57.374 29.630 0.00 0.00 0.00 4.26
2483 5029 9.643693 ACCATCTTTTATGTTTATGAGCAAAAG 57.356 29.630 0.00 0.00 35.38 2.27
2484 5030 9.643693 CCATCTTTTATGTTTATGAGCAAAAGT 57.356 29.630 0.00 0.00 35.50 2.66
2490 5036 9.840427 TTTATGTTTATGAGCAAAAGTTCTAGC 57.160 29.630 0.00 0.00 0.00 3.42
2491 5037 6.875948 TGTTTATGAGCAAAAGTTCTAGCA 57.124 33.333 0.00 0.00 0.00 3.49
2492 5038 6.668323 TGTTTATGAGCAAAAGTTCTAGCAC 58.332 36.000 0.00 0.00 0.00 4.40
2493 5039 6.262049 TGTTTATGAGCAAAAGTTCTAGCACA 59.738 34.615 0.00 0.00 32.51 4.57
2494 5040 7.040478 TGTTTATGAGCAAAAGTTCTAGCACAT 60.040 33.333 10.28 10.28 40.46 3.21
2495 5041 5.557891 ATGAGCAAAAGTTCTAGCACATC 57.442 39.130 0.00 0.00 34.04 3.06
2496 5042 4.388485 TGAGCAAAAGTTCTAGCACATCA 58.612 39.130 0.00 0.00 0.00 3.07
2497 5043 4.821260 TGAGCAAAAGTTCTAGCACATCAA 59.179 37.500 0.00 0.00 0.00 2.57
2498 5044 5.299028 TGAGCAAAAGTTCTAGCACATCAAA 59.701 36.000 0.00 0.00 0.00 2.69
2499 5045 5.766222 AGCAAAAGTTCTAGCACATCAAAG 58.234 37.500 0.00 0.00 0.00 2.77
2500 5046 5.300286 AGCAAAAGTTCTAGCACATCAAAGT 59.700 36.000 0.00 0.00 0.00 2.66
2501 5047 5.626955 GCAAAAGTTCTAGCACATCAAAGTC 59.373 40.000 0.00 0.00 0.00 3.01
2502 5048 6.728200 CAAAAGTTCTAGCACATCAAAGTCA 58.272 36.000 0.00 0.00 0.00 3.41
2503 5049 6.942532 AAAGTTCTAGCACATCAAAGTCAA 57.057 33.333 0.00 0.00 0.00 3.18
2504 5050 6.942532 AAGTTCTAGCACATCAAAGTCAAA 57.057 33.333 0.00 0.00 0.00 2.69
2505 5051 6.305693 AGTTCTAGCACATCAAAGTCAAAC 57.694 37.500 0.00 0.00 0.00 2.93
2506 5052 6.058183 AGTTCTAGCACATCAAAGTCAAACT 58.942 36.000 0.00 0.00 0.00 2.66
2507 5053 7.217200 AGTTCTAGCACATCAAAGTCAAACTA 58.783 34.615 0.00 0.00 0.00 2.24
2508 5054 7.880195 AGTTCTAGCACATCAAAGTCAAACTAT 59.120 33.333 0.00 0.00 0.00 2.12
2509 5055 7.834068 TCTAGCACATCAAAGTCAAACTATC 57.166 36.000 0.00 0.00 0.00 2.08
2510 5056 5.536554 AGCACATCAAAGTCAAACTATCG 57.463 39.130 0.00 0.00 0.00 2.92
2511 5057 4.393062 AGCACATCAAAGTCAAACTATCGG 59.607 41.667 0.00 0.00 0.00 4.18
2512 5058 4.154195 GCACATCAAAGTCAAACTATCGGT 59.846 41.667 0.00 0.00 0.00 4.69
2513 5059 5.334879 GCACATCAAAGTCAAACTATCGGTT 60.335 40.000 0.00 0.00 40.28 4.44
2514 5060 6.128391 GCACATCAAAGTCAAACTATCGGTTA 60.128 38.462 0.00 0.00 37.12 2.85
2515 5061 7.414098 GCACATCAAAGTCAAACTATCGGTTAT 60.414 37.037 0.00 0.00 37.12 1.89
2516 5062 9.093970 CACATCAAAGTCAAACTATCGGTTATA 57.906 33.333 0.00 0.00 37.12 0.98
2517 5063 9.832445 ACATCAAAGTCAAACTATCGGTTATAT 57.168 29.630 0.00 0.00 37.12 0.86
2519 5065 9.832445 ATCAAAGTCAAACTATCGGTTATATGT 57.168 29.630 0.00 0.00 37.12 2.29
2520 5066 9.661563 TCAAAGTCAAACTATCGGTTATATGTT 57.338 29.630 0.00 0.00 37.12 2.71
2521 5067 9.702726 CAAAGTCAAACTATCGGTTATATGTTG 57.297 33.333 0.00 0.00 37.12 3.33
2522 5068 9.444600 AAAGTCAAACTATCGGTTATATGTTGT 57.555 29.630 0.00 0.00 37.12 3.32
2580 5126 6.715347 ATTAGATAAATGCCAAGGACCAAC 57.285 37.500 0.00 0.00 0.00 3.77
2581 5127 4.322057 AGATAAATGCCAAGGACCAACT 57.678 40.909 0.00 0.00 0.00 3.16
2582 5128 4.019174 AGATAAATGCCAAGGACCAACTG 58.981 43.478 0.00 0.00 0.00 3.16
2583 5129 0.681175 AAATGCCAAGGACCAACTGC 59.319 50.000 0.00 0.00 0.00 4.40
2584 5130 0.469705 AATGCCAAGGACCAACTGCA 60.470 50.000 0.00 0.00 0.00 4.41
2585 5131 0.469705 ATGCCAAGGACCAACTGCAA 60.470 50.000 0.00 0.00 31.81 4.08
2586 5132 1.108727 TGCCAAGGACCAACTGCAAG 61.109 55.000 0.00 0.00 42.29 4.01
2587 5133 0.823356 GCCAAGGACCAACTGCAAGA 60.823 55.000 0.00 0.00 37.43 3.02
2588 5134 1.915141 CCAAGGACCAACTGCAAGAT 58.085 50.000 0.00 0.00 37.43 2.40
2589 5135 2.242043 CCAAGGACCAACTGCAAGATT 58.758 47.619 0.00 0.00 37.43 2.40
2590 5136 2.629617 CCAAGGACCAACTGCAAGATTT 59.370 45.455 0.00 0.00 37.43 2.17
2591 5137 3.070015 CCAAGGACCAACTGCAAGATTTT 59.930 43.478 0.00 0.00 37.43 1.82
2592 5138 4.301628 CAAGGACCAACTGCAAGATTTTC 58.698 43.478 0.00 0.00 37.43 2.29
2593 5139 3.837355 AGGACCAACTGCAAGATTTTCT 58.163 40.909 0.00 0.00 37.43 2.52
2594 5140 4.218312 AGGACCAACTGCAAGATTTTCTT 58.782 39.130 0.00 0.00 37.14 2.52
2595 5141 5.385198 AGGACCAACTGCAAGATTTTCTTA 58.615 37.500 0.00 0.00 33.78 2.10
2596 5142 5.474876 AGGACCAACTGCAAGATTTTCTTAG 59.525 40.000 0.00 0.00 33.78 2.18
2597 5143 5.473504 GGACCAACTGCAAGATTTTCTTAGA 59.526 40.000 0.00 0.00 33.78 2.10
2598 5144 6.319141 ACCAACTGCAAGATTTTCTTAGAC 57.681 37.500 0.00 0.00 33.78 2.59
2599 5145 5.827797 ACCAACTGCAAGATTTTCTTAGACA 59.172 36.000 0.00 0.00 33.78 3.41
2600 5146 6.491403 ACCAACTGCAAGATTTTCTTAGACAT 59.509 34.615 0.00 0.00 33.78 3.06
2601 5147 6.805271 CCAACTGCAAGATTTTCTTAGACATG 59.195 38.462 0.00 0.00 33.78 3.21
2602 5148 7.365741 CAACTGCAAGATTTTCTTAGACATGT 58.634 34.615 0.00 0.00 33.78 3.21
2603 5149 8.506437 CAACTGCAAGATTTTCTTAGACATGTA 58.494 33.333 0.00 0.00 33.78 2.29
2604 5150 8.621532 ACTGCAAGATTTTCTTAGACATGTAA 57.378 30.769 0.00 0.00 33.78 2.41
2605 5151 9.066892 ACTGCAAGATTTTCTTAGACATGTAAA 57.933 29.630 0.00 0.00 33.78 2.01
2606 5152 9.897744 CTGCAAGATTTTCTTAGACATGTAAAA 57.102 29.630 0.00 1.81 33.78 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.037208 CAGGTGGGATATCATTGTTTGCTC 59.963 45.833 4.83 0.00 0.00 4.26
69 74 0.960861 GGTTAGCCTGCTTGTCCCAC 60.961 60.000 0.00 0.00 0.00 4.61
96 103 9.079833 GCTACTTAGTAATTACATTGACGAACA 57.920 33.333 17.65 0.00 0.00 3.18
114 121 5.523916 ACGTGCATTAATCTTGGCTACTTAG 59.476 40.000 0.00 0.00 0.00 2.18
115 122 5.424757 ACGTGCATTAATCTTGGCTACTTA 58.575 37.500 0.00 0.00 0.00 2.24
116 123 4.261801 ACGTGCATTAATCTTGGCTACTT 58.738 39.130 0.00 0.00 0.00 2.24
117 124 3.873910 ACGTGCATTAATCTTGGCTACT 58.126 40.909 0.00 0.00 0.00 2.57
118 125 5.728351 TTACGTGCATTAATCTTGGCTAC 57.272 39.130 0.00 0.00 0.00 3.58
198 208 6.046593 TGCTTACCGTTTGTATATCTTGGAG 58.953 40.000 0.00 0.00 0.00 3.86
238 258 4.263677 GCACGCTTAAATTGACATGTCATG 59.736 41.667 28.32 19.88 39.64 3.07
245 265 2.330231 GCTGCACGCTTAAATTGACA 57.670 45.000 0.00 0.00 35.14 3.58
283 303 3.942130 AACTGCACTTCCAAATTAGCC 57.058 42.857 0.00 0.00 0.00 3.93
300 1116 2.275380 GCCATGGCGGGACAAAACT 61.275 57.895 23.48 0.00 34.06 2.66
334 1150 1.446445 CATGTGGCGGCCATTTGTG 60.446 57.895 26.68 16.69 35.28 3.33
335 1151 0.971959 ATCATGTGGCGGCCATTTGT 60.972 50.000 26.68 12.70 35.28 2.83
336 1152 0.249155 GATCATGTGGCGGCCATTTG 60.249 55.000 26.68 23.53 35.28 2.32
337 1153 0.396139 AGATCATGTGGCGGCCATTT 60.396 50.000 26.68 12.94 35.28 2.32
360 1176 3.057019 GGAAAAGGAACGGAAATGCAAC 58.943 45.455 0.00 0.00 0.00 4.17
364 1180 4.165779 CGATTGGAAAAGGAACGGAAATG 58.834 43.478 0.00 0.00 0.00 2.32
405 1221 2.920724 TGAAAGATGTTGGTGTCCGA 57.079 45.000 0.00 0.00 0.00 4.55
428 1244 8.466617 AGTTAGGTCACTCGTTTATCAGATAT 57.533 34.615 0.00 0.00 0.00 1.63
435 1275 6.830873 ACACTAGTTAGGTCACTCGTTTAT 57.169 37.500 0.00 0.00 0.00 1.40
475 1315 0.808453 GCATGATGCCCACACATTGC 60.808 55.000 6.04 0.00 37.42 3.56
481 1321 1.140852 GTACCTAGCATGATGCCCACA 59.859 52.381 14.72 0.00 46.52 4.17
482 1322 1.140852 TGTACCTAGCATGATGCCCAC 59.859 52.381 14.72 5.74 46.52 4.61
491 1331 2.431057 AGCTAAGCGTTGTACCTAGCAT 59.569 45.455 3.29 0.00 0.00 3.79
503 1351 1.014564 GTTCAAGCCGAGCTAAGCGT 61.015 55.000 2.02 0.00 38.25 5.07
505 1353 1.156736 TTGTTCAAGCCGAGCTAAGC 58.843 50.000 0.00 0.00 38.25 3.09
536 1385 7.028361 AGTAGACGTTGCTTGTTCTATAACTC 58.972 38.462 0.00 0.00 36.51 3.01
554 2369 5.147865 CCTATGCTTTCGTATGAGTAGACG 58.852 45.833 0.00 0.00 42.54 4.18
566 2381 4.142600 CCTTGAAGAAACCCTATGCTTTCG 60.143 45.833 0.00 0.00 32.57 3.46
574 2389 1.271926 GCTGCCCTTGAAGAAACCCTA 60.272 52.381 0.00 0.00 0.00 3.53
577 2392 0.884514 GAGCTGCCCTTGAAGAAACC 59.115 55.000 0.00 0.00 0.00 3.27
580 2395 0.607489 GCTGAGCTGCCCTTGAAGAA 60.607 55.000 0.00 0.00 0.00 2.52
582 2397 1.002379 AGCTGAGCTGCCCTTGAAG 60.002 57.895 5.97 0.00 37.57 3.02
584 2399 2.181445 CTGAGCTGAGCTGCCCTTGA 62.181 60.000 13.71 0.00 39.88 3.02
671 3164 4.340381 ACGGTTAGTACTACCATGCCTAAG 59.660 45.833 16.72 5.44 35.31 2.18
672 3165 4.280819 ACGGTTAGTACTACCATGCCTAA 58.719 43.478 16.72 0.00 35.31 2.69
673 3166 3.902218 ACGGTTAGTACTACCATGCCTA 58.098 45.455 16.72 0.00 35.31 3.93
674 3167 2.743553 ACGGTTAGTACTACCATGCCT 58.256 47.619 16.72 0.00 35.31 4.75
704 3234 3.866582 CTCCATGGACTCCGGCCC 61.867 72.222 11.44 0.00 0.00 5.80
773 3303 0.314259 CGCACGTACGCTTGCTATTG 60.314 55.000 23.21 10.69 37.68 1.90
832 3365 4.282068 GCGTGTTATATAAACGGACGAGA 58.718 43.478 21.08 0.00 37.77 4.04
833 3366 3.423206 GGCGTGTTATATAAACGGACGAG 59.577 47.826 21.08 3.55 37.77 4.18
834 3367 3.371168 GGCGTGTTATATAAACGGACGA 58.629 45.455 21.08 0.00 37.77 4.20
835 3368 2.151736 CGGCGTGTTATATAAACGGACG 59.848 50.000 21.08 16.25 37.77 4.79
836 3369 2.097250 GCGGCGTGTTATATAAACGGAC 60.097 50.000 21.08 11.83 37.77 4.79
890 3423 0.179124 GGCTCTGTAGTCGCTTGGAG 60.179 60.000 0.00 0.00 0.00 3.86
897 3430 1.132643 GGTGTAGTGGCTCTGTAGTCG 59.867 57.143 0.00 0.00 0.00 4.18
898 3431 1.132643 CGGTGTAGTGGCTCTGTAGTC 59.867 57.143 0.00 0.00 0.00 2.59
947 3480 2.766400 GCCAGAGAGAGACCGACCG 61.766 68.421 0.00 0.00 0.00 4.79
974 3508 0.941463 CTGTGTGTGACTGGCTCGTC 60.941 60.000 1.37 1.37 34.52 4.20
976 3510 0.665670 CTCTGTGTGTGACTGGCTCG 60.666 60.000 0.00 0.00 0.00 5.03
978 3512 0.678395 CTCTCTGTGTGTGACTGGCT 59.322 55.000 0.00 0.00 0.00 4.75
979 3513 0.948141 GCTCTCTGTGTGTGACTGGC 60.948 60.000 0.00 0.00 0.00 4.85
980 3514 0.665670 CGCTCTCTGTGTGTGACTGG 60.666 60.000 0.00 0.00 0.00 4.00
981 3515 0.312102 TCGCTCTCTGTGTGTGACTG 59.688 55.000 0.00 0.00 0.00 3.51
982 3516 1.067985 CATCGCTCTCTGTGTGTGACT 60.068 52.381 0.00 0.00 32.52 3.41
983 3517 1.344458 CATCGCTCTCTGTGTGTGAC 58.656 55.000 0.00 0.00 32.52 3.67
984 3518 0.389037 GCATCGCTCTCTGTGTGTGA 60.389 55.000 0.00 0.00 33.94 3.58
1348 3885 0.811616 ATGAAGCCGACCTTGATCGC 60.812 55.000 0.00 0.00 40.87 4.58
1680 4220 1.567504 ACCGCAGTTATATCGTGTGC 58.432 50.000 0.00 0.00 0.00 4.57
1788 4334 0.035630 GGCCTGCTGATGACAGAACT 60.036 55.000 0.00 0.00 46.03 3.01
1792 4338 1.812922 GTCGGCCTGCTGATGACAG 60.813 63.158 0.00 0.00 45.91 3.51
1837 4383 6.586082 CACAAATTAACCCAGTAATGACAAGC 59.414 38.462 0.00 0.00 0.00 4.01
1857 4403 4.141344 ACCCTTACTAGTTCCAAGCACAAA 60.141 41.667 0.00 0.00 0.00 2.83
1863 4409 4.652822 AGCAAACCCTTACTAGTTCCAAG 58.347 43.478 0.00 0.00 0.00 3.61
1932 4478 1.228245 GAACCAAGCAGTGCCTGGA 60.228 57.895 34.40 0.00 42.28 3.86
1933 4479 1.529010 TGAACCAAGCAGTGCCTGG 60.529 57.895 27.82 27.82 44.92 4.45
1938 4484 4.836125 ATACAAAGTGAACCAAGCAGTG 57.164 40.909 0.00 0.00 0.00 3.66
1939 4485 4.278419 GGAATACAAAGTGAACCAAGCAGT 59.722 41.667 0.00 0.00 0.00 4.40
1941 4487 3.572255 GGGAATACAAAGTGAACCAAGCA 59.428 43.478 0.00 0.00 0.00 3.91
1943 4489 4.320202 CGTGGGAATACAAAGTGAACCAAG 60.320 45.833 0.00 0.00 0.00 3.61
1952 4498 2.280628 GAGGAGCGTGGGAATACAAAG 58.719 52.381 0.00 0.00 0.00 2.77
1956 4502 0.179081 GTGGAGGAGCGTGGGAATAC 60.179 60.000 0.00 0.00 0.00 1.89
1957 4503 0.325296 AGTGGAGGAGCGTGGGAATA 60.325 55.000 0.00 0.00 0.00 1.75
1958 4504 1.613630 AGTGGAGGAGCGTGGGAAT 60.614 57.895 0.00 0.00 0.00 3.01
1964 4510 0.600255 CGTTTTCAGTGGAGGAGCGT 60.600 55.000 0.00 0.00 0.00 5.07
1966 4512 0.868406 CACGTTTTCAGTGGAGGAGC 59.132 55.000 0.00 0.00 36.06 4.70
1994 4540 1.486310 CAGATGATTTGGACGGGAGGA 59.514 52.381 0.00 0.00 0.00 3.71
1995 4541 1.475751 CCAGATGATTTGGACGGGAGG 60.476 57.143 0.00 0.00 37.96 4.30
2015 4561 2.928116 GTGGCGGTGAGTACTTAATCAC 59.072 50.000 8.07 8.07 46.95 3.06
2016 4562 2.416296 CGTGGCGGTGAGTACTTAATCA 60.416 50.000 0.00 0.00 0.00 2.57
2017 4563 2.159338 TCGTGGCGGTGAGTACTTAATC 60.159 50.000 0.00 0.00 0.00 1.75
2018 4564 1.820519 TCGTGGCGGTGAGTACTTAAT 59.179 47.619 0.00 0.00 0.00 1.40
2019 4565 1.068333 GTCGTGGCGGTGAGTACTTAA 60.068 52.381 0.00 0.00 0.00 1.85
2020 4566 0.523072 GTCGTGGCGGTGAGTACTTA 59.477 55.000 0.00 0.00 0.00 2.24
2021 4567 1.288127 GTCGTGGCGGTGAGTACTT 59.712 57.895 0.00 0.00 0.00 2.24
2022 4568 1.457823 TTGTCGTGGCGGTGAGTACT 61.458 55.000 0.00 0.00 0.00 2.73
2023 4569 1.007038 TTGTCGTGGCGGTGAGTAC 60.007 57.895 0.00 0.00 0.00 2.73
2024 4570 1.174078 TCTTGTCGTGGCGGTGAGTA 61.174 55.000 0.00 0.00 0.00 2.59
2025 4571 2.023414 TTCTTGTCGTGGCGGTGAGT 62.023 55.000 0.00 0.00 0.00 3.41
2026 4572 0.670546 ATTCTTGTCGTGGCGGTGAG 60.671 55.000 0.00 0.00 0.00 3.51
2027 4573 0.250124 AATTCTTGTCGTGGCGGTGA 60.250 50.000 0.00 0.00 0.00 4.02
2028 4574 1.434555 TAATTCTTGTCGTGGCGGTG 58.565 50.000 0.00 0.00 0.00 4.94
2029 4575 2.006888 CATAATTCTTGTCGTGGCGGT 58.993 47.619 0.00 0.00 0.00 5.68
2030 4576 1.330521 CCATAATTCTTGTCGTGGCGG 59.669 52.381 0.00 0.00 0.00 6.13
2031 4577 2.276201 TCCATAATTCTTGTCGTGGCG 58.724 47.619 0.00 0.00 0.00 5.69
2032 4578 3.485216 CGTTCCATAATTCTTGTCGTGGC 60.485 47.826 0.00 0.00 0.00 5.01
2033 4579 3.063452 CCGTTCCATAATTCTTGTCGTGG 59.937 47.826 0.00 0.00 0.00 4.94
2034 4580 3.063452 CCCGTTCCATAATTCTTGTCGTG 59.937 47.826 0.00 0.00 0.00 4.35
2035 4581 3.267483 CCCGTTCCATAATTCTTGTCGT 58.733 45.455 0.00 0.00 0.00 4.34
2036 4582 2.612212 CCCCGTTCCATAATTCTTGTCG 59.388 50.000 0.00 0.00 0.00 4.35
2037 4583 2.949644 CCCCCGTTCCATAATTCTTGTC 59.050 50.000 0.00 0.00 0.00 3.18
2038 4584 2.948600 GCCCCCGTTCCATAATTCTTGT 60.949 50.000 0.00 0.00 0.00 3.16
2039 4585 1.681264 GCCCCCGTTCCATAATTCTTG 59.319 52.381 0.00 0.00 0.00 3.02
2040 4586 1.286553 TGCCCCCGTTCCATAATTCTT 59.713 47.619 0.00 0.00 0.00 2.52
2041 4587 0.923358 TGCCCCCGTTCCATAATTCT 59.077 50.000 0.00 0.00 0.00 2.40
2042 4588 1.995376 ATGCCCCCGTTCCATAATTC 58.005 50.000 0.00 0.00 0.00 2.17
2043 4589 2.316108 GAATGCCCCCGTTCCATAATT 58.684 47.619 0.00 0.00 32.04 1.40
2044 4590 1.216678 TGAATGCCCCCGTTCCATAAT 59.783 47.619 0.00 0.00 36.37 1.28
2045 4591 0.626382 TGAATGCCCCCGTTCCATAA 59.374 50.000 0.00 0.00 36.37 1.90
2046 4592 0.626382 TTGAATGCCCCCGTTCCATA 59.374 50.000 0.00 0.00 36.37 2.74
2047 4593 0.032217 ATTGAATGCCCCCGTTCCAT 60.032 50.000 0.00 0.00 36.37 3.41
2048 4594 0.626382 TATTGAATGCCCCCGTTCCA 59.374 50.000 0.00 0.00 36.37 3.53
2049 4595 1.318576 CTATTGAATGCCCCCGTTCC 58.681 55.000 0.00 0.00 36.37 3.62
2050 4596 1.133915 TCCTATTGAATGCCCCCGTTC 60.134 52.381 0.00 0.00 37.47 3.95
2051 4597 0.923358 TCCTATTGAATGCCCCCGTT 59.077 50.000 0.00 0.00 0.00 4.44
2052 4598 0.474184 CTCCTATTGAATGCCCCCGT 59.526 55.000 0.00 0.00 0.00 5.28
2053 4599 0.764890 TCTCCTATTGAATGCCCCCG 59.235 55.000 0.00 0.00 0.00 5.73
2054 4600 2.057922 TCTCTCCTATTGAATGCCCCC 58.942 52.381 0.00 0.00 0.00 5.40
2055 4601 3.137360 ACTTCTCTCCTATTGAATGCCCC 59.863 47.826 0.00 0.00 0.00 5.80
2056 4602 4.429854 ACTTCTCTCCTATTGAATGCCC 57.570 45.455 0.00 0.00 0.00 5.36
2057 4603 6.763355 TCATACTTCTCTCCTATTGAATGCC 58.237 40.000 0.00 0.00 0.00 4.40
2058 4604 6.368516 GCTCATACTTCTCTCCTATTGAATGC 59.631 42.308 0.00 0.00 0.00 3.56
2059 4605 7.669427 AGCTCATACTTCTCTCCTATTGAATG 58.331 38.462 0.00 0.00 0.00 2.67
2060 4606 7.854166 AGCTCATACTTCTCTCCTATTGAAT 57.146 36.000 0.00 0.00 0.00 2.57
2061 4607 7.124901 ACAAGCTCATACTTCTCTCCTATTGAA 59.875 37.037 0.00 0.00 0.00 2.69
2062 4608 6.609212 ACAAGCTCATACTTCTCTCCTATTGA 59.391 38.462 0.00 0.00 0.00 2.57
2063 4609 6.815089 ACAAGCTCATACTTCTCTCCTATTG 58.185 40.000 0.00 0.00 0.00 1.90
2064 4610 7.430760 AACAAGCTCATACTTCTCTCCTATT 57.569 36.000 0.00 0.00 0.00 1.73
2065 4611 8.417884 GTTAACAAGCTCATACTTCTCTCCTAT 58.582 37.037 0.00 0.00 0.00 2.57
2066 4612 7.147880 GGTTAACAAGCTCATACTTCTCTCCTA 60.148 40.741 8.10 0.00 0.00 2.94
2067 4613 6.351456 GGTTAACAAGCTCATACTTCTCTCCT 60.351 42.308 8.10 0.00 0.00 3.69
2068 4614 5.813157 GGTTAACAAGCTCATACTTCTCTCC 59.187 44.000 8.10 0.00 0.00 3.71
2069 4615 6.311690 GTGGTTAACAAGCTCATACTTCTCTC 59.688 42.308 8.10 0.00 0.00 3.20
2070 4616 6.166982 GTGGTTAACAAGCTCATACTTCTCT 58.833 40.000 8.10 0.00 0.00 3.10
2071 4617 5.351740 GGTGGTTAACAAGCTCATACTTCTC 59.648 44.000 8.10 0.00 0.00 2.87
2072 4618 5.221843 TGGTGGTTAACAAGCTCATACTTCT 60.222 40.000 13.17 0.00 0.00 2.85
2073 4619 5.001232 TGGTGGTTAACAAGCTCATACTTC 58.999 41.667 13.17 0.00 0.00 3.01
2074 4620 4.760204 GTGGTGGTTAACAAGCTCATACTT 59.240 41.667 13.17 0.00 0.00 2.24
2075 4621 4.041691 AGTGGTGGTTAACAAGCTCATACT 59.958 41.667 13.17 5.56 0.00 2.12
2076 4622 4.324267 AGTGGTGGTTAACAAGCTCATAC 58.676 43.478 13.17 3.40 0.00 2.39
2077 4623 4.634012 AGTGGTGGTTAACAAGCTCATA 57.366 40.909 13.17 0.00 0.00 2.15
2078 4624 3.508845 AGTGGTGGTTAACAAGCTCAT 57.491 42.857 13.17 0.00 0.00 2.90
2079 4625 3.290948 AAGTGGTGGTTAACAAGCTCA 57.709 42.857 13.17 0.00 0.00 4.26
2080 4626 4.359706 CAAAAGTGGTGGTTAACAAGCTC 58.640 43.478 13.17 9.60 0.00 4.09
2081 4627 3.430236 GCAAAAGTGGTGGTTAACAAGCT 60.430 43.478 13.17 0.00 0.00 3.74
2082 4628 2.863740 GCAAAAGTGGTGGTTAACAAGC 59.136 45.455 8.10 6.58 0.00 4.01
2083 4629 4.116747 TGCAAAAGTGGTGGTTAACAAG 57.883 40.909 8.10 0.00 0.00 3.16
2084 4630 4.744795 ATGCAAAAGTGGTGGTTAACAA 57.255 36.364 8.10 0.00 0.00 2.83
2085 4631 4.744795 AATGCAAAAGTGGTGGTTAACA 57.255 36.364 8.10 0.00 0.00 2.41
2086 4632 7.541122 TTTAAATGCAAAAGTGGTGGTTAAC 57.459 32.000 0.00 0.00 0.00 2.01
2087 4633 8.147642 CATTTAAATGCAAAAGTGGTGGTTAA 57.852 30.769 14.96 0.00 0.00 2.01
2088 4634 7.721286 CATTTAAATGCAAAAGTGGTGGTTA 57.279 32.000 14.96 0.00 0.00 2.85
2089 4635 6.616774 CATTTAAATGCAAAAGTGGTGGTT 57.383 33.333 14.96 0.00 0.00 3.67
2143 4689 9.249457 CATGTGATTTCGTATATGAGTAGTGTT 57.751 33.333 0.00 0.00 0.00 3.32
2144 4690 7.867909 CCATGTGATTTCGTATATGAGTAGTGT 59.132 37.037 0.00 0.00 0.00 3.55
2145 4691 7.148738 GCCATGTGATTTCGTATATGAGTAGTG 60.149 40.741 0.00 0.00 0.00 2.74
2146 4692 6.868864 GCCATGTGATTTCGTATATGAGTAGT 59.131 38.462 0.00 0.00 0.00 2.73
2147 4693 6.033937 CGCCATGTGATTTCGTATATGAGTAG 59.966 42.308 0.00 0.00 0.00 2.57
2148 4694 5.861787 CGCCATGTGATTTCGTATATGAGTA 59.138 40.000 0.00 0.00 0.00 2.59
2149 4695 4.686091 CGCCATGTGATTTCGTATATGAGT 59.314 41.667 0.00 0.00 0.00 3.41
2150 4696 4.091945 CCGCCATGTGATTTCGTATATGAG 59.908 45.833 0.00 0.00 0.00 2.90
2151 4697 3.993736 CCGCCATGTGATTTCGTATATGA 59.006 43.478 0.00 0.00 0.00 2.15
2152 4698 3.125146 CCCGCCATGTGATTTCGTATATG 59.875 47.826 0.00 0.00 0.00 1.78
2153 4699 3.244422 ACCCGCCATGTGATTTCGTATAT 60.244 43.478 0.00 0.00 0.00 0.86
2154 4700 2.103432 ACCCGCCATGTGATTTCGTATA 59.897 45.455 0.00 0.00 0.00 1.47
2155 4701 1.134220 ACCCGCCATGTGATTTCGTAT 60.134 47.619 0.00 0.00 0.00 3.06
2156 4702 0.250793 ACCCGCCATGTGATTTCGTA 59.749 50.000 0.00 0.00 0.00 3.43
2157 4703 0.250793 TACCCGCCATGTGATTTCGT 59.749 50.000 0.00 0.00 0.00 3.85
2158 4704 1.264020 CATACCCGCCATGTGATTTCG 59.736 52.381 0.00 0.00 0.00 3.46
2159 4705 2.571212 TCATACCCGCCATGTGATTTC 58.429 47.619 0.00 0.00 0.00 2.17
2160 4706 2.727123 TCATACCCGCCATGTGATTT 57.273 45.000 0.00 0.00 0.00 2.17
2161 4707 2.783135 GATCATACCCGCCATGTGATT 58.217 47.619 0.00 0.00 29.06 2.57
2162 4708 1.338105 CGATCATACCCGCCATGTGAT 60.338 52.381 0.00 0.00 31.32 3.06
2163 4709 0.033366 CGATCATACCCGCCATGTGA 59.967 55.000 0.00 0.00 0.00 3.58
2164 4710 0.033366 TCGATCATACCCGCCATGTG 59.967 55.000 0.00 0.00 0.00 3.21
2165 4711 0.976641 ATCGATCATACCCGCCATGT 59.023 50.000 0.00 0.00 0.00 3.21
2166 4712 1.338105 ACATCGATCATACCCGCCATG 60.338 52.381 0.00 0.00 0.00 3.66
2167 4713 0.976641 ACATCGATCATACCCGCCAT 59.023 50.000 0.00 0.00 0.00 4.40
2168 4714 0.033366 CACATCGATCATACCCGCCA 59.967 55.000 0.00 0.00 0.00 5.69
2169 4715 0.317160 TCACATCGATCATACCCGCC 59.683 55.000 0.00 0.00 0.00 6.13
2170 4716 1.419374 GTCACATCGATCATACCCGC 58.581 55.000 0.00 0.00 0.00 6.13
2171 4717 1.265905 TCGTCACATCGATCATACCCG 59.734 52.381 0.00 0.00 34.85 5.28
2172 4718 2.552743 TCTCGTCACATCGATCATACCC 59.447 50.000 0.00 0.00 39.12 3.69
2173 4719 3.556513 GTCTCGTCACATCGATCATACC 58.443 50.000 0.00 0.00 39.12 2.73
2174 4720 3.059800 TCGTCTCGTCACATCGATCATAC 60.060 47.826 0.00 0.00 39.12 2.39
2175 4721 3.128349 TCGTCTCGTCACATCGATCATA 58.872 45.455 0.00 0.00 39.12 2.15
2176 4722 1.940613 TCGTCTCGTCACATCGATCAT 59.059 47.619 0.00 0.00 39.12 2.45
2177 4723 1.327764 CTCGTCTCGTCACATCGATCA 59.672 52.381 0.00 0.00 39.12 2.92
2178 4724 1.593469 TCTCGTCTCGTCACATCGATC 59.407 52.381 0.00 0.00 39.12 3.69
2179 4725 1.595328 CTCTCGTCTCGTCACATCGAT 59.405 52.381 0.00 0.00 39.12 3.59
2180 4726 1.000145 CTCTCGTCTCGTCACATCGA 59.000 55.000 0.00 0.00 38.19 3.59
2181 4727 0.722282 ACTCTCGTCTCGTCACATCG 59.278 55.000 0.00 0.00 0.00 3.84
2182 4728 1.732809 TCACTCTCGTCTCGTCACATC 59.267 52.381 0.00 0.00 0.00 3.06
2183 4729 1.465387 GTCACTCTCGTCTCGTCACAT 59.535 52.381 0.00 0.00 0.00 3.21
2184 4730 0.866427 GTCACTCTCGTCTCGTCACA 59.134 55.000 0.00 0.00 0.00 3.58
2185 4731 1.127213 GAGTCACTCTCGTCTCGTCAC 59.873 57.143 0.00 0.00 33.25 3.67
2186 4732 1.430479 GAGTCACTCTCGTCTCGTCA 58.570 55.000 0.00 0.00 33.25 4.35
2202 4748 8.934169 GTGTTTATTACATGCAACACGCGAGT 62.934 42.308 15.93 8.81 46.97 4.18
2203 4749 3.649870 TTATTACATGCAACACGCGAG 57.350 42.857 15.93 7.88 46.97 5.03
2204 4750 3.186613 TGTTTATTACATGCAACACGCGA 59.813 39.130 15.93 0.00 46.97 5.87
2205 4751 3.296943 GTGTTTATTACATGCAACACGCG 59.703 43.478 3.53 3.53 46.97 6.01
2206 4752 4.799280 GTGTTTATTACATGCAACACGC 57.201 40.909 0.00 0.00 39.60 5.34
2208 4754 7.692908 AAACTGTGTTTATTACATGCAACAC 57.307 32.000 14.07 14.07 46.12 3.32
2209 4755 7.593273 GCTAAACTGTGTTTATTACATGCAACA 59.407 33.333 0.00 0.00 39.39 3.33
2210 4756 7.807907 AGCTAAACTGTGTTTATTACATGCAAC 59.192 33.333 0.00 0.00 39.39 4.17
2211 4757 7.881142 AGCTAAACTGTGTTTATTACATGCAA 58.119 30.769 0.00 0.00 39.39 4.08
2212 4758 7.447374 AGCTAAACTGTGTTTATTACATGCA 57.553 32.000 0.00 0.00 39.39 3.96
2220 4766 9.515226 TCCAAGAATTAGCTAAACTGTGTTTAT 57.485 29.630 10.85 0.00 0.00 1.40
2221 4767 8.911918 TCCAAGAATTAGCTAAACTGTGTTTA 57.088 30.769 10.85 3.38 0.00 2.01
2222 4768 7.817418 TCCAAGAATTAGCTAAACTGTGTTT 57.183 32.000 10.85 0.00 0.00 2.83
2223 4769 7.575720 GCATCCAAGAATTAGCTAAACTGTGTT 60.576 37.037 10.85 0.00 0.00 3.32
2224 4770 6.127897 GCATCCAAGAATTAGCTAAACTGTGT 60.128 38.462 10.85 0.00 0.00 3.72
2225 4771 6.094603 AGCATCCAAGAATTAGCTAAACTGTG 59.905 38.462 10.85 12.31 0.00 3.66
2226 4772 6.094603 CAGCATCCAAGAATTAGCTAAACTGT 59.905 38.462 10.85 0.00 0.00 3.55
2227 4773 6.317140 TCAGCATCCAAGAATTAGCTAAACTG 59.683 38.462 10.85 5.52 0.00 3.16
2228 4774 6.418101 TCAGCATCCAAGAATTAGCTAAACT 58.582 36.000 10.85 10.16 0.00 2.66
2229 4775 6.683974 TCAGCATCCAAGAATTAGCTAAAC 57.316 37.500 10.85 7.99 0.00 2.01
2230 4776 7.394359 AGTTTCAGCATCCAAGAATTAGCTAAA 59.606 33.333 10.85 0.00 0.00 1.85
2231 4777 6.886459 AGTTTCAGCATCCAAGAATTAGCTAA 59.114 34.615 8.99 8.99 0.00 3.09
2232 4778 6.418101 AGTTTCAGCATCCAAGAATTAGCTA 58.582 36.000 0.00 0.00 0.00 3.32
2233 4779 5.259632 AGTTTCAGCATCCAAGAATTAGCT 58.740 37.500 0.00 0.00 0.00 3.32
2234 4780 5.573337 AGTTTCAGCATCCAAGAATTAGC 57.427 39.130 0.00 0.00 0.00 3.09
2235 4781 6.810182 CCAAAGTTTCAGCATCCAAGAATTAG 59.190 38.462 0.00 0.00 0.00 1.73
2236 4782 6.267471 ACCAAAGTTTCAGCATCCAAGAATTA 59.733 34.615 0.00 0.00 0.00 1.40
2237 4783 5.070847 ACCAAAGTTTCAGCATCCAAGAATT 59.929 36.000 0.00 0.00 0.00 2.17
2238 4784 4.590222 ACCAAAGTTTCAGCATCCAAGAAT 59.410 37.500 0.00 0.00 0.00 2.40
2239 4785 3.960102 ACCAAAGTTTCAGCATCCAAGAA 59.040 39.130 0.00 0.00 0.00 2.52
2240 4786 3.565307 ACCAAAGTTTCAGCATCCAAGA 58.435 40.909 0.00 0.00 0.00 3.02
2241 4787 5.452078 TTACCAAAGTTTCAGCATCCAAG 57.548 39.130 0.00 0.00 0.00 3.61
2242 4788 5.860941 TTTACCAAAGTTTCAGCATCCAA 57.139 34.783 0.00 0.00 0.00 3.53
2243 4789 6.418057 AATTTACCAAAGTTTCAGCATCCA 57.582 33.333 0.00 0.00 0.00 3.41
2244 4790 6.928492 TGAAATTTACCAAAGTTTCAGCATCC 59.072 34.615 5.12 0.00 36.11 3.51
2245 4791 7.945033 TGAAATTTACCAAAGTTTCAGCATC 57.055 32.000 5.12 0.00 36.11 3.91
2246 4792 8.907222 AATGAAATTTACCAAAGTTTCAGCAT 57.093 26.923 12.33 2.49 41.97 3.79
2247 4793 7.984050 TGAATGAAATTTACCAAAGTTTCAGCA 59.016 29.630 12.33 10.40 41.97 4.41
2248 4794 8.275632 GTGAATGAAATTTACCAAAGTTTCAGC 58.724 33.333 12.33 8.67 41.97 4.26
2262 4808 9.118300 TGTGCAAATTTTAGGTGAATGAAATTT 57.882 25.926 0.00 0.00 40.41 1.82
2263 4809 8.558700 GTGTGCAAATTTTAGGTGAATGAAATT 58.441 29.630 0.00 0.00 40.93 1.82
2264 4810 7.173047 GGTGTGCAAATTTTAGGTGAATGAAAT 59.827 33.333 0.00 0.00 0.00 2.17
2265 4811 6.481644 GGTGTGCAAATTTTAGGTGAATGAAA 59.518 34.615 0.00 0.00 0.00 2.69
2266 4812 5.988561 GGTGTGCAAATTTTAGGTGAATGAA 59.011 36.000 0.00 0.00 0.00 2.57
2267 4813 5.069648 TGGTGTGCAAATTTTAGGTGAATGA 59.930 36.000 0.00 0.00 0.00 2.57
2268 4814 5.295950 TGGTGTGCAAATTTTAGGTGAATG 58.704 37.500 0.00 0.00 0.00 2.67
2269 4815 5.543507 TGGTGTGCAAATTTTAGGTGAAT 57.456 34.783 0.00 0.00 0.00 2.57
2270 4816 5.344743 TTGGTGTGCAAATTTTAGGTGAA 57.655 34.783 0.00 0.00 0.00 3.18
2271 4817 5.543507 ATTGGTGTGCAAATTTTAGGTGA 57.456 34.783 0.00 0.00 0.00 4.02
2272 4818 7.440856 AGTTAATTGGTGTGCAAATTTTAGGTG 59.559 33.333 0.00 0.00 31.20 4.00
2273 4819 7.505258 AGTTAATTGGTGTGCAAATTTTAGGT 58.495 30.769 0.00 0.00 31.20 3.08
2274 4820 7.961325 AGTTAATTGGTGTGCAAATTTTAGG 57.039 32.000 0.00 0.00 31.20 2.69
2275 4821 9.039870 TCAAGTTAATTGGTGTGCAAATTTTAG 57.960 29.630 0.00 0.00 39.54 1.85
2276 4822 8.948631 TCAAGTTAATTGGTGTGCAAATTTTA 57.051 26.923 0.00 0.00 39.54 1.52
2277 4823 7.856145 TCAAGTTAATTGGTGTGCAAATTTT 57.144 28.000 0.00 0.00 39.54 1.82
2278 4824 7.856145 TTCAAGTTAATTGGTGTGCAAATTT 57.144 28.000 0.00 0.00 39.54 1.82
2279 4825 7.856145 TTTCAAGTTAATTGGTGTGCAAATT 57.144 28.000 0.00 0.00 39.54 1.82
2280 4826 7.856145 TTTTCAAGTTAATTGGTGTGCAAAT 57.144 28.000 0.00 0.00 39.54 2.32
2281 4827 7.254252 CGATTTTCAAGTTAATTGGTGTGCAAA 60.254 33.333 0.00 0.00 39.54 3.68
2282 4828 6.199908 CGATTTTCAAGTTAATTGGTGTGCAA 59.800 34.615 0.00 0.00 39.54 4.08
2283 4829 5.689514 CGATTTTCAAGTTAATTGGTGTGCA 59.310 36.000 0.00 0.00 39.54 4.57
2284 4830 5.918011 TCGATTTTCAAGTTAATTGGTGTGC 59.082 36.000 0.00 0.00 39.54 4.57
2285 4831 7.922505 TTCGATTTTCAAGTTAATTGGTGTG 57.077 32.000 0.00 0.00 39.54 3.82
2295 4841 9.613428 TCACTATGGATATTCGATTTTCAAGTT 57.387 29.630 0.00 0.00 0.00 2.66
2296 4842 9.265901 CTCACTATGGATATTCGATTTTCAAGT 57.734 33.333 0.00 0.00 0.00 3.16
2297 4843 8.715998 CCTCACTATGGATATTCGATTTTCAAG 58.284 37.037 0.00 0.00 0.00 3.02
2298 4844 8.210946 ACCTCACTATGGATATTCGATTTTCAA 58.789 33.333 0.00 0.00 0.00 2.69
2299 4845 7.735917 ACCTCACTATGGATATTCGATTTTCA 58.264 34.615 0.00 0.00 0.00 2.69
2300 4846 8.608844 AACCTCACTATGGATATTCGATTTTC 57.391 34.615 0.00 0.00 0.00 2.29
2301 4847 9.712305 CTAACCTCACTATGGATATTCGATTTT 57.288 33.333 0.00 0.00 0.00 1.82
2302 4848 8.314751 CCTAACCTCACTATGGATATTCGATTT 58.685 37.037 0.00 0.00 0.00 2.17
2303 4849 7.093289 CCCTAACCTCACTATGGATATTCGATT 60.093 40.741 0.00 0.00 0.00 3.34
2304 4850 6.381420 CCCTAACCTCACTATGGATATTCGAT 59.619 42.308 0.00 0.00 0.00 3.59
2305 4851 5.715279 CCCTAACCTCACTATGGATATTCGA 59.285 44.000 0.00 0.00 0.00 3.71
2306 4852 5.624738 GCCCTAACCTCACTATGGATATTCG 60.625 48.000 0.00 0.00 0.00 3.34
2307 4853 5.485708 AGCCCTAACCTCACTATGGATATTC 59.514 44.000 0.00 0.00 0.00 1.75
2308 4854 5.415961 AGCCCTAACCTCACTATGGATATT 58.584 41.667 0.00 0.00 0.00 1.28
2309 4855 5.029973 AGCCCTAACCTCACTATGGATAT 57.970 43.478 0.00 0.00 0.00 1.63
2310 4856 4.487282 AGCCCTAACCTCACTATGGATA 57.513 45.455 0.00 0.00 0.00 2.59
2311 4857 3.352611 AGCCCTAACCTCACTATGGAT 57.647 47.619 0.00 0.00 0.00 3.41
2312 4858 2.771943 CAAGCCCTAACCTCACTATGGA 59.228 50.000 0.00 0.00 0.00 3.41
2313 4859 2.505819 ACAAGCCCTAACCTCACTATGG 59.494 50.000 0.00 0.00 0.00 2.74
2314 4860 3.055094 ACACAAGCCCTAACCTCACTATG 60.055 47.826 0.00 0.00 0.00 2.23
2315 4861 3.182152 ACACAAGCCCTAACCTCACTAT 58.818 45.455 0.00 0.00 0.00 2.12
2316 4862 2.616524 ACACAAGCCCTAACCTCACTA 58.383 47.619 0.00 0.00 0.00 2.74
2317 4863 1.435256 ACACAAGCCCTAACCTCACT 58.565 50.000 0.00 0.00 0.00 3.41
2318 4864 1.880027 CAACACAAGCCCTAACCTCAC 59.120 52.381 0.00 0.00 0.00 3.51
2319 4865 1.202879 CCAACACAAGCCCTAACCTCA 60.203 52.381 0.00 0.00 0.00 3.86
2320 4866 1.202891 ACCAACACAAGCCCTAACCTC 60.203 52.381 0.00 0.00 0.00 3.85
2321 4867 0.850784 ACCAACACAAGCCCTAACCT 59.149 50.000 0.00 0.00 0.00 3.50
2322 4868 0.958822 CACCAACACAAGCCCTAACC 59.041 55.000 0.00 0.00 0.00 2.85
2323 4869 1.975660 TCACCAACACAAGCCCTAAC 58.024 50.000 0.00 0.00 0.00 2.34
2324 4870 2.303175 GTTCACCAACACAAGCCCTAA 58.697 47.619 0.00 0.00 32.14 2.69
2325 4871 1.213182 TGTTCACCAACACAAGCCCTA 59.787 47.619 0.00 0.00 37.61 3.53
2326 4872 0.033601 TGTTCACCAACACAAGCCCT 60.034 50.000 0.00 0.00 37.61 5.19
2327 4873 1.000274 GATGTTCACCAACACAAGCCC 60.000 52.381 0.00 0.00 45.47 5.19
2328 4874 1.680735 TGATGTTCACCAACACAAGCC 59.319 47.619 0.00 0.00 45.47 4.35
2329 4875 3.435105 TTGATGTTCACCAACACAAGC 57.565 42.857 0.00 0.00 45.47 4.01
2330 4876 5.247507 TCTTTGATGTTCACCAACACAAG 57.752 39.130 0.00 0.00 45.47 3.16
2331 4877 5.651387 TTCTTTGATGTTCACCAACACAA 57.349 34.783 0.00 0.00 45.47 3.33
2332 4878 5.651387 TTTCTTTGATGTTCACCAACACA 57.349 34.783 0.00 0.00 45.47 3.72
2333 4879 5.519927 CCTTTTCTTTGATGTTCACCAACAC 59.480 40.000 0.00 0.00 45.47 3.32
2334 4880 5.395103 CCCTTTTCTTTGATGTTCACCAACA 60.395 40.000 0.00 0.00 46.71 3.33
2335 4881 5.049828 CCCTTTTCTTTGATGTTCACCAAC 58.950 41.667 0.00 0.00 0.00 3.77
2336 4882 4.714308 ACCCTTTTCTTTGATGTTCACCAA 59.286 37.500 0.00 0.00 0.00 3.67
2337 4883 4.285863 ACCCTTTTCTTTGATGTTCACCA 58.714 39.130 0.00 0.00 0.00 4.17
2338 4884 4.937201 ACCCTTTTCTTTGATGTTCACC 57.063 40.909 0.00 0.00 0.00 4.02
2339 4885 5.006649 GCAAACCCTTTTCTTTGATGTTCAC 59.993 40.000 0.00 0.00 30.20 3.18
2340 4886 5.104982 AGCAAACCCTTTTCTTTGATGTTCA 60.105 36.000 0.00 0.00 30.20 3.18
2341 4887 5.359756 AGCAAACCCTTTTCTTTGATGTTC 58.640 37.500 0.00 0.00 30.20 3.18
2342 4888 5.357742 AGCAAACCCTTTTCTTTGATGTT 57.642 34.783 0.00 0.00 30.20 2.71
2343 4889 5.357742 AAGCAAACCCTTTTCTTTGATGT 57.642 34.783 0.00 0.00 30.20 3.06
2344 4890 5.816777 TCAAAGCAAACCCTTTTCTTTGATG 59.183 36.000 14.55 0.00 39.98 3.07
2345 4891 5.988287 TCAAAGCAAACCCTTTTCTTTGAT 58.012 33.333 14.55 0.00 39.98 2.57
2346 4892 5.413309 TCAAAGCAAACCCTTTTCTTTGA 57.587 34.783 14.55 14.55 41.02 2.69
2347 4893 5.816777 TCATCAAAGCAAACCCTTTTCTTTG 59.183 36.000 11.37 11.37 38.93 2.77
2348 4894 5.988287 TCATCAAAGCAAACCCTTTTCTTT 58.012 33.333 0.00 0.00 32.97 2.52
2349 4895 5.612725 TCATCAAAGCAAACCCTTTTCTT 57.387 34.783 0.00 0.00 32.97 2.52
2350 4896 5.104982 TGTTCATCAAAGCAAACCCTTTTCT 60.105 36.000 0.00 0.00 32.97 2.52
2351 4897 5.115480 TGTTCATCAAAGCAAACCCTTTTC 58.885 37.500 0.00 0.00 32.97 2.29
2352 4898 5.096443 TGTTCATCAAAGCAAACCCTTTT 57.904 34.783 0.00 0.00 32.97 2.27
2353 4899 4.751767 TGTTCATCAAAGCAAACCCTTT 57.248 36.364 0.00 0.00 35.52 3.11
2354 4900 4.344679 TGATGTTCATCAAAGCAAACCCTT 59.655 37.500 12.29 0.00 0.00 3.95
2355 4901 3.896888 TGATGTTCATCAAAGCAAACCCT 59.103 39.130 12.29 0.00 0.00 4.34
2356 4902 3.989817 GTGATGTTCATCAAAGCAAACCC 59.010 43.478 15.65 0.00 31.60 4.11
2357 4903 4.619973 TGTGATGTTCATCAAAGCAAACC 58.380 39.130 15.65 3.68 31.60 3.27
2358 4904 5.522456 TCTGTGATGTTCATCAAAGCAAAC 58.478 37.500 21.56 8.50 36.17 2.93
2359 4905 5.771153 TCTGTGATGTTCATCAAAGCAAA 57.229 34.783 21.56 7.94 36.17 3.68
2360 4906 5.771153 TTCTGTGATGTTCATCAAAGCAA 57.229 34.783 21.56 15.56 36.17 3.91
2361 4907 5.771153 TTTCTGTGATGTTCATCAAAGCA 57.229 34.783 21.56 12.67 36.17 3.91
2382 4928 9.822185 AATTGTATGAAAGAAGAGCAACTTTTT 57.178 25.926 0.00 0.00 39.13 1.94
2383 4929 9.822185 AAATTGTATGAAAGAAGAGCAACTTTT 57.178 25.926 0.00 0.00 39.13 2.27
2384 4930 9.822185 AAAATTGTATGAAAGAAGAGCAACTTT 57.178 25.926 0.00 0.00 39.13 2.66
2385 4931 9.822185 AAAAATTGTATGAAAGAAGAGCAACTT 57.178 25.926 0.00 0.00 42.03 2.66
2410 4956 9.550406 TGAGTTCGGTATTTTTAGAAGAAGAAA 57.450 29.630 0.00 0.00 0.00 2.52
2411 4957 9.550406 TTGAGTTCGGTATTTTTAGAAGAAGAA 57.450 29.630 0.00 0.00 0.00 2.52
2412 4958 9.720769 ATTGAGTTCGGTATTTTTAGAAGAAGA 57.279 29.630 0.00 0.00 0.00 2.87
2418 4964 8.662141 GCAACTATTGAGTTCGGTATTTTTAGA 58.338 33.333 0.00 0.00 44.39 2.10
2419 4965 8.447833 TGCAACTATTGAGTTCGGTATTTTTAG 58.552 33.333 0.00 0.00 44.39 1.85
2420 4966 8.325421 TGCAACTATTGAGTTCGGTATTTTTA 57.675 30.769 0.00 0.00 44.39 1.52
2421 4967 7.209471 TGCAACTATTGAGTTCGGTATTTTT 57.791 32.000 0.00 0.00 44.39 1.94
2422 4968 6.811253 TGCAACTATTGAGTTCGGTATTTT 57.189 33.333 0.00 0.00 44.39 1.82
2423 4969 8.395633 GTTATGCAACTATTGAGTTCGGTATTT 58.604 33.333 0.00 0.00 44.39 1.40
2424 4970 7.551262 TGTTATGCAACTATTGAGTTCGGTATT 59.449 33.333 0.00 0.00 44.39 1.89
2425 4971 7.045416 TGTTATGCAACTATTGAGTTCGGTAT 58.955 34.615 0.00 0.00 44.39 2.73
2426 4972 6.399743 TGTTATGCAACTATTGAGTTCGGTA 58.600 36.000 0.00 0.00 44.39 4.02
2427 4973 5.242434 TGTTATGCAACTATTGAGTTCGGT 58.758 37.500 0.00 0.00 44.39 4.69
2428 4974 5.351465 ACTGTTATGCAACTATTGAGTTCGG 59.649 40.000 0.00 0.00 44.39 4.30
2429 4975 6.408858 ACTGTTATGCAACTATTGAGTTCG 57.591 37.500 0.00 0.00 44.39 3.95
2430 4976 7.806690 TGAACTGTTATGCAACTATTGAGTTC 58.193 34.615 0.00 0.00 44.39 3.01
2432 4978 7.928307 ATGAACTGTTATGCAACTATTGAGT 57.072 32.000 0.00 0.00 37.59 3.41
2433 4979 8.338259 GGTATGAACTGTTATGCAACTATTGAG 58.662 37.037 0.00 0.00 35.56 3.02
2434 4980 7.826744 TGGTATGAACTGTTATGCAACTATTGA 59.173 33.333 0.00 0.00 35.56 2.57
2435 4981 7.984391 TGGTATGAACTGTTATGCAACTATTG 58.016 34.615 0.00 0.00 35.56 1.90
2436 4982 8.752005 ATGGTATGAACTGTTATGCAACTATT 57.248 30.769 0.00 0.00 35.56 1.73
2437 4983 8.213679 AGATGGTATGAACTGTTATGCAACTAT 58.786 33.333 0.00 0.00 35.56 2.12
2438 4984 7.564793 AGATGGTATGAACTGTTATGCAACTA 58.435 34.615 0.00 0.00 35.56 2.24
2439 4985 6.418101 AGATGGTATGAACTGTTATGCAACT 58.582 36.000 0.00 0.00 35.56 3.16
2440 4986 6.683974 AGATGGTATGAACTGTTATGCAAC 57.316 37.500 0.00 0.00 35.06 4.17
2441 4987 7.701539 AAAGATGGTATGAACTGTTATGCAA 57.298 32.000 0.00 0.00 0.00 4.08
2442 4988 7.701539 AAAAGATGGTATGAACTGTTATGCA 57.298 32.000 0.00 0.00 0.00 3.96
2443 4989 9.669353 CATAAAAGATGGTATGAACTGTTATGC 57.331 33.333 0.00 0.00 35.35 3.14
2453 4999 9.625747 TGCTCATAAACATAAAAGATGGTATGA 57.374 29.630 10.37 10.37 33.30 2.15
2457 5003 9.643693 CTTTTGCTCATAAACATAAAAGATGGT 57.356 29.630 0.00 0.00 37.33 3.55
2458 5004 9.643693 ACTTTTGCTCATAAACATAAAAGATGG 57.356 29.630 12.51 0.00 38.08 3.51
2464 5010 9.840427 GCTAGAACTTTTGCTCATAAACATAAA 57.160 29.630 0.00 0.00 0.00 1.40
2465 5011 9.008965 TGCTAGAACTTTTGCTCATAAACATAA 57.991 29.630 0.00 0.00 0.00 1.90
2466 5012 8.450964 GTGCTAGAACTTTTGCTCATAAACATA 58.549 33.333 0.00 0.00 0.00 2.29
2467 5013 7.040478 TGTGCTAGAACTTTTGCTCATAAACAT 60.040 33.333 1.64 0.00 0.00 2.71
2468 5014 6.262049 TGTGCTAGAACTTTTGCTCATAAACA 59.738 34.615 1.64 0.00 0.00 2.83
2469 5015 6.668323 TGTGCTAGAACTTTTGCTCATAAAC 58.332 36.000 1.64 0.00 0.00 2.01
2470 5016 6.875948 TGTGCTAGAACTTTTGCTCATAAA 57.124 33.333 1.64 0.00 0.00 1.40
2471 5017 6.654582 TGATGTGCTAGAACTTTTGCTCATAA 59.345 34.615 1.64 0.00 38.96 1.90
2472 5018 6.172630 TGATGTGCTAGAACTTTTGCTCATA 58.827 36.000 1.64 0.00 38.96 2.15
2473 5019 5.005740 TGATGTGCTAGAACTTTTGCTCAT 58.994 37.500 1.64 0.00 40.68 2.90
2474 5020 4.388485 TGATGTGCTAGAACTTTTGCTCA 58.612 39.130 1.64 0.00 34.29 4.26
2475 5021 5.362556 TTGATGTGCTAGAACTTTTGCTC 57.637 39.130 1.64 0.00 0.00 4.26
2476 5022 5.300286 ACTTTGATGTGCTAGAACTTTTGCT 59.700 36.000 1.64 0.00 0.00 3.91
2477 5023 5.523369 ACTTTGATGTGCTAGAACTTTTGC 58.477 37.500 1.64 0.00 0.00 3.68
2478 5024 6.728200 TGACTTTGATGTGCTAGAACTTTTG 58.272 36.000 1.64 0.00 0.00 2.44
2479 5025 6.942532 TGACTTTGATGTGCTAGAACTTTT 57.057 33.333 1.64 0.00 0.00 2.27
2480 5026 6.942532 TTGACTTTGATGTGCTAGAACTTT 57.057 33.333 1.64 0.00 0.00 2.66
2481 5027 6.543831 AGTTTGACTTTGATGTGCTAGAACTT 59.456 34.615 1.64 0.00 0.00 2.66
2482 5028 6.058183 AGTTTGACTTTGATGTGCTAGAACT 58.942 36.000 1.64 0.00 0.00 3.01
2483 5029 6.305693 AGTTTGACTTTGATGTGCTAGAAC 57.694 37.500 0.00 0.00 0.00 3.01
2484 5030 7.063426 CGATAGTTTGACTTTGATGTGCTAGAA 59.937 37.037 0.00 0.00 0.00 2.10
2485 5031 6.531594 CGATAGTTTGACTTTGATGTGCTAGA 59.468 38.462 0.00 0.00 0.00 2.43
2486 5032 6.237942 CCGATAGTTTGACTTTGATGTGCTAG 60.238 42.308 0.00 0.00 0.00 3.42
2487 5033 5.580691 CCGATAGTTTGACTTTGATGTGCTA 59.419 40.000 0.00 0.00 0.00 3.49
2488 5034 4.393062 CCGATAGTTTGACTTTGATGTGCT 59.607 41.667 0.00 0.00 0.00 4.40
2489 5035 4.154195 ACCGATAGTTTGACTTTGATGTGC 59.846 41.667 0.00 0.00 0.00 4.57
2490 5036 5.862924 ACCGATAGTTTGACTTTGATGTG 57.137 39.130 0.00 0.00 0.00 3.21
2491 5037 9.832445 ATATAACCGATAGTTTGACTTTGATGT 57.168 29.630 0.00 0.00 40.05 3.06
2493 5039 9.832445 ACATATAACCGATAGTTTGACTTTGAT 57.168 29.630 0.00 0.00 40.05 2.57
2494 5040 9.661563 AACATATAACCGATAGTTTGACTTTGA 57.338 29.630 0.00 0.00 40.05 2.69
2495 5041 9.702726 CAACATATAACCGATAGTTTGACTTTG 57.297 33.333 0.00 0.00 40.05 2.77
2496 5042 9.444600 ACAACATATAACCGATAGTTTGACTTT 57.555 29.630 0.00 0.00 40.05 2.66
2554 5100 8.860088 GTTGGTCCTTGGCATTTATCTAATTAT 58.140 33.333 0.00 0.00 0.00 1.28
2555 5101 8.058847 AGTTGGTCCTTGGCATTTATCTAATTA 58.941 33.333 0.00 0.00 0.00 1.40
2556 5102 6.897413 AGTTGGTCCTTGGCATTTATCTAATT 59.103 34.615 0.00 0.00 0.00 1.40
2557 5103 6.322201 CAGTTGGTCCTTGGCATTTATCTAAT 59.678 38.462 0.00 0.00 0.00 1.73
2558 5104 5.652014 CAGTTGGTCCTTGGCATTTATCTAA 59.348 40.000 0.00 0.00 0.00 2.10
2559 5105 5.192927 CAGTTGGTCCTTGGCATTTATCTA 58.807 41.667 0.00 0.00 0.00 1.98
2560 5106 4.019174 CAGTTGGTCCTTGGCATTTATCT 58.981 43.478 0.00 0.00 0.00 1.98
2561 5107 3.429410 GCAGTTGGTCCTTGGCATTTATC 60.429 47.826 0.00 0.00 0.00 1.75
2562 5108 2.497273 GCAGTTGGTCCTTGGCATTTAT 59.503 45.455 0.00 0.00 0.00 1.40
2563 5109 1.892474 GCAGTTGGTCCTTGGCATTTA 59.108 47.619 0.00 0.00 0.00 1.40
2564 5110 0.681175 GCAGTTGGTCCTTGGCATTT 59.319 50.000 0.00 0.00 0.00 2.32
2565 5111 0.469705 TGCAGTTGGTCCTTGGCATT 60.470 50.000 0.00 0.00 0.00 3.56
2566 5112 0.469705 TTGCAGTTGGTCCTTGGCAT 60.470 50.000 0.00 0.00 0.00 4.40
2567 5113 1.076412 TTGCAGTTGGTCCTTGGCA 60.076 52.632 0.00 0.00 0.00 4.92
2568 5114 0.823356 TCTTGCAGTTGGTCCTTGGC 60.823 55.000 0.00 0.00 0.00 4.52
2569 5115 1.915141 ATCTTGCAGTTGGTCCTTGG 58.085 50.000 0.00 0.00 0.00 3.61
2570 5116 4.038402 AGAAAATCTTGCAGTTGGTCCTTG 59.962 41.667 0.00 0.00 0.00 3.61
2571 5117 4.218312 AGAAAATCTTGCAGTTGGTCCTT 58.782 39.130 0.00 0.00 0.00 3.36
2572 5118 3.837355 AGAAAATCTTGCAGTTGGTCCT 58.163 40.909 0.00 0.00 0.00 3.85
2573 5119 4.590850 AAGAAAATCTTGCAGTTGGTCC 57.409 40.909 0.00 0.00 34.98 4.46
2574 5120 6.017109 TGTCTAAGAAAATCTTGCAGTTGGTC 60.017 38.462 2.94 0.00 37.29 4.02
2575 5121 5.827797 TGTCTAAGAAAATCTTGCAGTTGGT 59.172 36.000 2.94 0.00 37.29 3.67
2576 5122 6.317789 TGTCTAAGAAAATCTTGCAGTTGG 57.682 37.500 2.94 0.00 37.29 3.77
2577 5123 7.365741 ACATGTCTAAGAAAATCTTGCAGTTG 58.634 34.615 0.00 0.00 37.29 3.16
2578 5124 7.516198 ACATGTCTAAGAAAATCTTGCAGTT 57.484 32.000 0.00 0.00 37.29 3.16
2579 5125 8.621532 TTACATGTCTAAGAAAATCTTGCAGT 57.378 30.769 0.00 3.69 37.29 4.40
2580 5126 9.897744 TTTTACATGTCTAAGAAAATCTTGCAG 57.102 29.630 0.00 0.00 37.29 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.