Multiple sequence alignment - TraesCS3A01G345400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G345400 chr3A 100.000 2887 0 0 1 2887 594797553 594800439 0.000000e+00 5332.0
1 TraesCS3A01G345400 chr3B 87.992 2465 179 55 12 2402 594440927 594443348 0.000000e+00 2804.0
2 TraesCS3A01G345400 chr3B 94.118 85 4 1 2400 2483 594443458 594443542 8.400000e-26 128.0
3 TraesCS3A01G345400 chr3D 90.442 1810 114 24 1 1789 452484719 452486490 0.000000e+00 2329.0
4 TraesCS3A01G345400 chr3D 96.186 236 7 2 2233 2468 452486840 452487073 4.510000e-103 385.0
5 TraesCS3A01G345400 chr3D 78.133 375 45 25 1979 2339 1605551 1605902 1.360000e-48 204.0
6 TraesCS3A01G345400 chr3D 100.000 30 0 0 2452 2481 452487496 452487525 4.020000e-04 56.5
7 TraesCS3A01G345400 chr2A 87.740 416 44 4 2478 2887 31045195 31045609 2.010000e-131 479.0
8 TraesCS3A01G345400 chr2A 80.528 303 44 12 1966 2265 59381235 59380945 4.840000e-53 219.0
9 TraesCS3A01G345400 chr5A 87.530 417 44 5 2477 2887 667102365 667101951 2.600000e-130 475.0
10 TraesCS3A01G345400 chr5D 87.073 410 46 4 2484 2887 106692522 106692114 9.430000e-125 457.0
11 TraesCS3A01G345400 chr5D 89.590 317 32 1 2484 2800 28320432 28320117 4.480000e-108 401.0
12 TraesCS3A01G345400 chr5B 87.688 398 41 5 2481 2872 660815699 660816094 9.430000e-125 457.0
13 TraesCS3A01G345400 chr5B 78.873 355 60 15 1968 2314 554593919 554593572 2.890000e-55 226.0
14 TraesCS3A01G345400 chr2D 84.598 435 39 12 2480 2887 623913051 623912618 9.630000e-110 407.0
15 TraesCS3A01G345400 chrUn 89.130 322 30 5 2481 2800 110779458 110779776 2.080000e-106 396.0
16 TraesCS3A01G345400 chrUn 79.710 276 35 12 1991 2258 359992209 359991947 2.290000e-41 180.0
17 TraesCS3A01G345400 chr7A 88.509 322 33 4 2480 2800 364010307 364009989 1.250000e-103 387.0
18 TraesCS3A01G345400 chr7A 82.160 426 44 13 2491 2887 679900093 679900515 1.280000e-88 337.0
19 TraesCS3A01G345400 chr6D 88.272 324 36 2 2478 2800 6858900 6859222 1.250000e-103 387.0
20 TraesCS3A01G345400 chr6B 81.549 439 50 15 2477 2887 275919460 275919895 1.660000e-87 333.0
21 TraesCS3A01G345400 chr6B 82.353 221 11 9 2695 2887 718240835 718241055 1.780000e-37 167.0
22 TraesCS3A01G345400 chr6A 81.395 430 53 13 2480 2887 195292410 195292834 2.770000e-85 326.0
23 TraesCS3A01G345400 chr1D 83.158 285 19 11 2630 2887 350650786 350651068 1.730000e-57 233.0
24 TraesCS3A01G345400 chr1D 80.797 276 35 15 1981 2251 375975285 375975023 1.750000e-47 200.0
25 TraesCS3A01G345400 chr1A 78.553 387 54 20 1966 2339 474773580 474773210 8.050000e-56 228.0
26 TraesCS3A01G345400 chr7B 79.710 276 35 12 1991 2258 669217876 669217614 2.290000e-41 180.0
27 TraesCS3A01G345400 chr7B 79.710 276 35 12 1991 2258 669284927 669284665 2.290000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G345400 chr3A 594797553 594800439 2886 False 5332.0 5332 100.000000 1 2887 1 chr3A.!!$F1 2886
1 TraesCS3A01G345400 chr3B 594440927 594443542 2615 False 1466.0 2804 91.055000 12 2483 2 chr3B.!!$F1 2471
2 TraesCS3A01G345400 chr3D 452484719 452487525 2806 False 923.5 2329 95.542667 1 2481 3 chr3D.!!$F2 2480

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
395 405 0.740737 GTGCTTCACCCATGCATACC 59.259 55.0 0.0 0.0 37.49 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1955 2128 1.554617 GCATGGTGCCCAAAAACCTAT 59.445 47.619 0.0 0.0 36.95 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 75 9.073475 ACAAATACTTAAAACTTGGTATGAGCA 57.927 29.630 0.00 0.00 0.00 4.26
89 91 5.886960 ATGAGCAAGCGAAGAAAACTTAT 57.113 34.783 0.00 0.00 0.00 1.73
116 119 7.160547 TCGGAACCTAAAACTTCAAACTTTT 57.839 32.000 0.00 0.00 0.00 2.27
121 124 8.896320 AACCTAAAACTTCAAACTTTTTGTGT 57.104 26.923 0.00 0.00 0.00 3.72
122 125 8.305441 ACCTAAAACTTCAAACTTTTTGTGTG 57.695 30.769 0.00 0.00 35.23 3.82
125 128 3.595173 ACTTCAAACTTTTTGTGTGCCC 58.405 40.909 0.00 0.00 33.94 5.36
126 129 2.682155 TCAAACTTTTTGTGTGCCCC 57.318 45.000 0.00 0.00 33.94 5.80
127 130 1.902508 TCAAACTTTTTGTGTGCCCCA 59.097 42.857 0.00 0.00 33.94 4.96
128 131 2.503356 TCAAACTTTTTGTGTGCCCCAT 59.497 40.909 0.00 0.00 33.94 4.00
129 132 3.706594 TCAAACTTTTTGTGTGCCCCATA 59.293 39.130 0.00 0.00 33.94 2.74
144 147 2.159014 CCCCATACGAAATCCAACGAGA 60.159 50.000 0.00 0.00 0.00 4.04
150 153 1.267532 CGAAATCCAACGAGATTGCGG 60.268 52.381 15.55 3.26 46.97 5.69
152 155 2.332063 AATCCAACGAGATTGCGGAT 57.668 45.000 0.00 0.00 36.93 4.18
165 168 2.589492 GCGGATCGTGAGGCAATCG 61.589 63.158 0.00 0.00 0.00 3.34
195 204 4.722700 GCAGGTGCGTGTCCCCAT 62.723 66.667 0.00 0.00 0.00 4.00
196 205 2.986290 CAGGTGCGTGTCCCCATA 59.014 61.111 0.00 0.00 0.00 2.74
204 213 1.612199 GCGTGTCCCCATAAGTTTCCA 60.612 52.381 0.00 0.00 0.00 3.53
205 214 2.785562 CGTGTCCCCATAAGTTTCCAA 58.214 47.619 0.00 0.00 0.00 3.53
206 215 3.352648 CGTGTCCCCATAAGTTTCCAAT 58.647 45.455 0.00 0.00 0.00 3.16
208 217 3.447229 GTGTCCCCATAAGTTTCCAATGG 59.553 47.826 0.00 0.00 39.95 3.16
209 218 3.335183 TGTCCCCATAAGTTTCCAATGGA 59.665 43.478 0.00 0.00 42.36 3.41
210 219 3.954258 GTCCCCATAAGTTTCCAATGGAG 59.046 47.826 0.86 0.00 42.36 3.86
212 221 3.701040 CCCCATAAGTTTCCAATGGAGTG 59.299 47.826 0.86 0.00 42.36 3.51
213 222 3.701040 CCCATAAGTTTCCAATGGAGTGG 59.299 47.826 0.86 5.66 42.36 4.00
238 247 5.247564 GGTCATGCCCTAGTGGTATATTGTA 59.752 44.000 1.56 0.00 37.34 2.41
247 256 2.806244 GTGGTATATTGTAAGGGCAGCG 59.194 50.000 0.00 0.00 0.00 5.18
248 257 2.436542 TGGTATATTGTAAGGGCAGCGT 59.563 45.455 0.00 0.00 0.00 5.07
259 268 2.202623 GCAGCGTCCTACTCGTGG 60.203 66.667 0.00 0.00 0.00 4.94
268 277 3.361281 TCCTACTCGTGGACACATAGT 57.639 47.619 10.90 10.90 33.48 2.12
273 282 6.034591 CCTACTCGTGGACACATAGTAAAAG 58.965 44.000 12.74 6.33 32.52 2.27
274 283 4.817517 ACTCGTGGACACATAGTAAAAGG 58.182 43.478 3.12 0.00 0.00 3.11
278 287 7.093640 ACTCGTGGACACATAGTAAAAGGATAA 60.094 37.037 3.12 0.00 0.00 1.75
284 293 9.403583 GGACACATAGTAAAAGGATAAATTGGA 57.596 33.333 0.00 0.00 0.00 3.53
293 302 6.840780 AAAGGATAAATTGGAGTTCAGTGG 57.159 37.500 0.00 0.00 0.00 4.00
304 314 3.304928 GGAGTTCAGTGGCATTCAAAGTG 60.305 47.826 0.00 0.00 0.00 3.16
307 317 4.275936 AGTTCAGTGGCATTCAAAGTGTAC 59.724 41.667 0.00 0.00 0.00 2.90
325 335 6.560711 AGTGTACACTTTTGAACATGAAACC 58.439 36.000 22.95 0.00 38.83 3.27
340 350 9.274206 GAACATGAAACCCTACTTATATCTTCC 57.726 37.037 0.00 0.00 0.00 3.46
373 383 7.532682 AAGATCTCTTTAGCGACTCATTTTC 57.467 36.000 0.00 0.00 30.82 2.29
382 392 3.058639 AGCGACTCATTTTCTTGTGCTTC 60.059 43.478 0.00 0.00 0.00 3.86
395 405 0.740737 GTGCTTCACCCATGCATACC 59.259 55.000 0.00 0.00 37.49 2.73
500 511 6.093633 AGCCCAACGTGATTATACTTTCTTTC 59.906 38.462 0.00 0.00 0.00 2.62
540 553 4.837896 ACTTTGCAGAACTAAAGCTTCC 57.162 40.909 0.00 0.00 37.40 3.46
546 559 5.001232 TGCAGAACTAAAGCTTCCGTAAAT 58.999 37.500 0.00 0.00 0.00 1.40
693 708 4.765970 ATGCCCCCTCCCTCTGCA 62.766 66.667 0.00 0.00 36.23 4.41
748 775 2.286477 ACGTAGCACGATCGATCTTCTG 60.286 50.000 24.34 15.02 46.05 3.02
827 854 1.081708 CCGCGGTAGTTTGTTTGGC 60.082 57.895 19.50 0.00 0.00 4.52
851 878 6.238402 GCTAAGATCAGATCACACGTACAGTA 60.238 42.308 13.14 0.00 0.00 2.74
852 879 5.743026 AGATCAGATCACACGTACAGTAG 57.257 43.478 13.14 0.00 0.00 2.57
853 880 5.186942 AGATCAGATCACACGTACAGTAGT 58.813 41.667 13.14 0.00 0.00 2.73
882 909 2.200955 GATTCTGGGGTCCTTTCCTCT 58.799 52.381 0.00 0.00 0.00 3.69
926 956 3.551890 CGGAACAAACGTATCAGAGGATG 59.448 47.826 0.00 0.00 34.89 3.51
936 966 3.981071 ATCAGAGGATGTGGAAACGAA 57.019 42.857 0.00 0.00 30.86 3.85
937 967 3.040147 TCAGAGGATGTGGAAACGAAC 57.960 47.619 0.00 0.00 0.00 3.95
938 968 2.632996 TCAGAGGATGTGGAAACGAACT 59.367 45.455 0.00 0.00 0.00 3.01
941 971 3.576982 AGAGGATGTGGAAACGAACTACA 59.423 43.478 0.00 0.00 33.73 2.74
961 991 4.565022 ACAACAACAACAAACTTCTTGGG 58.435 39.130 0.00 0.00 0.00 4.12
1014 1044 2.006056 GCTCATATGCGGAGATCTGGC 61.006 57.143 0.00 3.93 34.24 4.85
1029 1062 0.384669 CTGGCACGTACTAGGTAGGC 59.615 60.000 0.00 0.00 0.00 3.93
1077 1122 2.511600 GCGACTTGATCCCACGGG 60.512 66.667 0.00 0.00 0.00 5.28
1268 1319 2.981909 TCGACGTCGAGGCCAAGT 60.982 61.111 34.97 0.00 44.22 3.16
1482 1533 4.363990 AGCCGTCTGTGCAGGTCG 62.364 66.667 0.00 5.32 0.00 4.79
1580 1643 3.822192 CCGTGTCCTCATCCGCGA 61.822 66.667 8.23 0.00 36.74 5.87
1581 1644 2.579787 CGTGTCCTCATCCGCGAC 60.580 66.667 8.23 0.00 36.74 5.19
1582 1645 2.202756 GTGTCCTCATCCGCGACC 60.203 66.667 8.23 0.00 0.00 4.79
1583 1646 3.822192 TGTCCTCATCCGCGACCG 61.822 66.667 8.23 0.00 0.00 4.79
1584 1647 3.823330 GTCCTCATCCGCGACCGT 61.823 66.667 8.23 0.00 0.00 4.83
1585 1648 3.822192 TCCTCATCCGCGACCGTG 61.822 66.667 8.23 0.04 0.00 4.94
1696 1759 2.461897 TTTGTTTCGTTGGTTCGCTC 57.538 45.000 0.00 0.00 0.00 5.03
1735 1798 2.279659 CGTGCAAGCACTTTTTGACAAG 59.720 45.455 21.35 0.00 44.16 3.16
1762 1825 4.915704 TCTTTAGTGGTTTTTGACAAGCG 58.084 39.130 0.00 0.00 0.00 4.68
1772 1835 6.038382 TGGTTTTTGACAAGCGTTATCTTACA 59.962 34.615 0.00 0.00 0.00 2.41
1837 1929 4.949856 GGTGTGATGATGACCAATTTAGGT 59.050 41.667 0.00 0.00 46.82 3.08
1849 1941 3.059166 CAATTTAGGTTGCAAGCACCAC 58.941 45.455 28.75 3.19 0.00 4.16
1860 1952 3.382865 TGCAAGCACCACAATTTTCTGTA 59.617 39.130 0.00 0.00 0.00 2.74
1861 1953 4.142071 TGCAAGCACCACAATTTTCTGTAA 60.142 37.500 0.00 0.00 0.00 2.41
1862 1954 4.445385 GCAAGCACCACAATTTTCTGTAAG 59.555 41.667 0.00 0.00 0.00 2.34
1907 2080 4.132336 TGCCATGCTCATCATCTAAACTC 58.868 43.478 0.00 0.00 31.79 3.01
1909 2082 4.375272 CCATGCTCATCATCTAAACTCGT 58.625 43.478 0.00 0.00 31.79 4.18
1927 2100 3.575630 TCGTCATCCTCGAAGAACAAAG 58.424 45.455 0.00 0.00 34.09 2.77
1943 2116 9.631452 GAAGAACAAAGATTTAAATTGCTAGCT 57.369 29.630 17.23 0.00 0.00 3.32
1988 2161 3.181476 GGCACCATGCTACCCTTTATTTG 60.181 47.826 0.13 0.00 44.28 2.32
2053 2226 7.962934 TCGAAAACAGTTATGTGAAAACTTG 57.037 32.000 0.00 0.00 40.39 3.16
2054 2227 7.531716 TCGAAAACAGTTATGTGAAAACTTGT 58.468 30.769 0.00 0.00 40.39 3.16
2087 2261 8.514594 TCACTACAGATCCATGAAATTTGTTTC 58.485 33.333 0.00 0.00 0.00 2.78
2088 2262 8.298854 CACTACAGATCCATGAAATTTGTTTCA 58.701 33.333 0.00 6.11 44.06 2.69
2140 2314 5.574891 AAACAAAAATCTGGCCCAAAAAC 57.425 34.783 0.00 0.00 0.00 2.43
2193 2367 9.736023 ACATATTTGTCTTCTCTTTGAACAAAC 57.264 29.630 1.51 0.00 37.87 2.93
2230 2405 9.719279 AAAATGTTGTGAAATTTTGCACATAAG 57.281 25.926 12.07 0.00 43.73 1.73
2259 2434 1.010580 TGTGTGTGCGTGTTTACAGG 58.989 50.000 0.00 0.00 35.07 4.00
2382 2564 5.708697 TGGCATAGCTCGCTAGTAGTTATAA 59.291 40.000 7.87 0.00 31.45 0.98
2481 3214 8.803799 CAAACGGCCAGTTATTAAATGAAATAC 58.196 33.333 12.33 0.00 43.37 1.89
2482 3215 7.633193 ACGGCCAGTTATTAAATGAAATACA 57.367 32.000 2.24 0.00 0.00 2.29
2484 3217 8.524487 ACGGCCAGTTATTAAATGAAATACAAA 58.476 29.630 2.24 0.00 0.00 2.83
2485 3218 9.360093 CGGCCAGTTATTAAATGAAATACAAAA 57.640 29.630 2.24 0.00 0.00 2.44
2498 3231 9.877178 AATGAAATACAAAAATAATAACGCCCA 57.123 25.926 0.00 0.00 0.00 5.36
2499 3232 8.690680 TGAAATACAAAAATAATAACGCCCAC 57.309 30.769 0.00 0.00 0.00 4.61
2500 3233 8.304596 TGAAATACAAAAATAATAACGCCCACA 58.695 29.630 0.00 0.00 0.00 4.17
2501 3234 8.468720 AAATACAAAAATAATAACGCCCACAC 57.531 30.769 0.00 0.00 0.00 3.82
2502 3235 4.477780 ACAAAAATAATAACGCCCACACG 58.522 39.130 0.00 0.00 39.50 4.49
2509 3242 4.010224 ACGCCCACACGTATGGCA 62.010 61.111 7.55 0.00 46.19 4.92
2510 3243 2.744318 CGCCCACACGTATGGCAA 60.744 61.111 7.55 0.00 45.63 4.52
2511 3244 2.328856 CGCCCACACGTATGGCAAA 61.329 57.895 7.55 0.00 45.63 3.68
2512 3245 1.211709 GCCCACACGTATGGCAAAC 59.788 57.895 7.55 0.00 44.70 2.93
2513 3246 1.519751 GCCCACACGTATGGCAAACA 61.520 55.000 7.55 0.00 44.70 2.83
2514 3247 1.173043 CCCACACGTATGGCAAACAT 58.827 50.000 7.55 0.00 43.68 2.71
2515 3248 1.543802 CCCACACGTATGGCAAACATT 59.456 47.619 7.55 0.00 41.03 2.71
2516 3249 2.594321 CCACACGTATGGCAAACATTG 58.406 47.619 0.00 0.00 41.03 2.82
2527 3260 2.886862 CAAACATTGCAACTCACCCA 57.113 45.000 0.00 0.00 0.00 4.51
2528 3261 3.389925 CAAACATTGCAACTCACCCAT 57.610 42.857 0.00 0.00 0.00 4.00
2529 3262 4.517952 CAAACATTGCAACTCACCCATA 57.482 40.909 0.00 0.00 0.00 2.74
2530 3263 5.075858 CAAACATTGCAACTCACCCATAT 57.924 39.130 0.00 0.00 0.00 1.78
2531 3264 4.724074 AACATTGCAACTCACCCATATG 57.276 40.909 0.00 0.00 0.00 1.78
2532 3265 3.700538 ACATTGCAACTCACCCATATGT 58.299 40.909 0.00 0.00 0.00 2.29
2533 3266 3.696051 ACATTGCAACTCACCCATATGTC 59.304 43.478 0.00 0.00 0.00 3.06
2534 3267 3.719268 TTGCAACTCACCCATATGTCT 57.281 42.857 0.00 0.00 0.00 3.41
2535 3268 2.989909 TGCAACTCACCCATATGTCTG 58.010 47.619 1.24 0.00 0.00 3.51
2536 3269 2.292267 GCAACTCACCCATATGTCTGG 58.708 52.381 1.24 0.00 35.95 3.86
2537 3270 2.292267 CAACTCACCCATATGTCTGGC 58.708 52.381 1.24 0.00 34.77 4.85
2538 3271 1.885049 ACTCACCCATATGTCTGGCT 58.115 50.000 1.24 0.00 34.77 4.75
2539 3272 1.765314 ACTCACCCATATGTCTGGCTC 59.235 52.381 1.24 0.00 34.77 4.70
2540 3273 1.764723 CTCACCCATATGTCTGGCTCA 59.235 52.381 1.24 0.00 34.77 4.26
2541 3274 2.371179 CTCACCCATATGTCTGGCTCAT 59.629 50.000 1.24 0.00 34.77 2.90
2542 3275 2.369860 TCACCCATATGTCTGGCTCATC 59.630 50.000 1.24 0.00 34.77 2.92
2543 3276 1.345741 ACCCATATGTCTGGCTCATCG 59.654 52.381 1.24 0.00 34.77 3.84
2544 3277 1.345741 CCCATATGTCTGGCTCATCGT 59.654 52.381 1.24 0.00 34.77 3.73
2545 3278 2.611473 CCCATATGTCTGGCTCATCGTC 60.611 54.545 1.24 0.00 34.77 4.20
2546 3279 2.611473 CCATATGTCTGGCTCATCGTCC 60.611 54.545 1.24 0.00 0.00 4.79
2547 3280 1.775385 TATGTCTGGCTCATCGTCCA 58.225 50.000 0.00 0.00 0.00 4.02
2552 3285 2.672961 CTGGCTCATCGTCCAGTTAA 57.327 50.000 0.35 0.00 43.66 2.01
2553 3286 2.544685 CTGGCTCATCGTCCAGTTAAG 58.455 52.381 0.35 0.00 43.66 1.85
2554 3287 1.899814 TGGCTCATCGTCCAGTTAAGT 59.100 47.619 0.00 0.00 0.00 2.24
2555 3288 2.301870 TGGCTCATCGTCCAGTTAAGTT 59.698 45.455 0.00 0.00 0.00 2.66
2556 3289 3.244422 TGGCTCATCGTCCAGTTAAGTTT 60.244 43.478 0.00 0.00 0.00 2.66
2557 3290 3.125316 GGCTCATCGTCCAGTTAAGTTTG 59.875 47.826 0.00 0.00 0.00 2.93
2558 3291 3.424962 GCTCATCGTCCAGTTAAGTTTGC 60.425 47.826 0.00 0.00 0.00 3.68
2559 3292 3.734463 TCATCGTCCAGTTAAGTTTGCA 58.266 40.909 0.00 0.00 0.00 4.08
2560 3293 3.496884 TCATCGTCCAGTTAAGTTTGCAC 59.503 43.478 0.00 0.00 0.00 4.57
2561 3294 1.862201 TCGTCCAGTTAAGTTTGCACG 59.138 47.619 0.00 0.00 0.00 5.34
2562 3295 1.862201 CGTCCAGTTAAGTTTGCACGA 59.138 47.619 0.00 0.00 0.00 4.35
2563 3296 2.285756 CGTCCAGTTAAGTTTGCACGAA 59.714 45.455 0.00 0.00 0.00 3.85
2564 3297 3.059188 CGTCCAGTTAAGTTTGCACGAAT 60.059 43.478 0.00 0.00 0.00 3.34
2565 3298 4.464112 GTCCAGTTAAGTTTGCACGAATC 58.536 43.478 0.00 0.00 0.00 2.52
2566 3299 4.213482 GTCCAGTTAAGTTTGCACGAATCT 59.787 41.667 0.00 0.00 0.00 2.40
2567 3300 4.819630 TCCAGTTAAGTTTGCACGAATCTT 59.180 37.500 0.00 0.00 0.00 2.40
2568 3301 4.911610 CCAGTTAAGTTTGCACGAATCTTG 59.088 41.667 0.00 0.00 0.00 3.02
2569 3302 5.277779 CCAGTTAAGTTTGCACGAATCTTGA 60.278 40.000 0.00 0.00 0.00 3.02
2570 3303 5.621228 CAGTTAAGTTTGCACGAATCTTGAC 59.379 40.000 0.00 0.00 33.24 3.18
2571 3304 5.295787 AGTTAAGTTTGCACGAATCTTGACA 59.704 36.000 0.00 0.00 34.52 3.58
2572 3305 3.609103 AGTTTGCACGAATCTTGACAC 57.391 42.857 0.00 0.00 0.00 3.67
2573 3306 2.942376 AGTTTGCACGAATCTTGACACA 59.058 40.909 0.00 0.00 0.00 3.72
2574 3307 3.565482 AGTTTGCACGAATCTTGACACAT 59.435 39.130 0.00 0.00 0.00 3.21
2575 3308 3.811722 TTGCACGAATCTTGACACATC 57.188 42.857 0.00 0.00 0.00 3.06
2576 3309 1.726248 TGCACGAATCTTGACACATCG 59.274 47.619 0.00 0.00 39.30 3.84
2577 3310 1.992667 GCACGAATCTTGACACATCGA 59.007 47.619 0.07 0.00 37.27 3.59
2578 3311 2.604914 GCACGAATCTTGACACATCGAT 59.395 45.455 0.00 0.00 37.27 3.59
2579 3312 3.542875 GCACGAATCTTGACACATCGATG 60.543 47.826 23.68 23.68 37.27 3.84
2580 3313 3.614176 CACGAATCTTGACACATCGATGT 59.386 43.478 25.18 25.18 42.84 3.06
2581 3314 4.798387 CACGAATCTTGACACATCGATGTA 59.202 41.667 29.52 14.41 39.39 2.29
2582 3315 5.037385 ACGAATCTTGACACATCGATGTAG 58.963 41.667 29.52 22.34 39.39 2.74
2583 3316 5.037385 CGAATCTTGACACATCGATGTAGT 58.963 41.667 29.52 26.38 39.39 2.73
2584 3317 5.516696 CGAATCTTGACACATCGATGTAGTT 59.483 40.000 29.52 17.13 39.39 2.24
2585 3318 6.035005 CGAATCTTGACACATCGATGTAGTTT 59.965 38.462 29.52 21.89 39.39 2.66
2586 3319 7.411912 CGAATCTTGACACATCGATGTAGTTTT 60.412 37.037 29.52 19.01 39.39 2.43
2587 3320 6.706055 TCTTGACACATCGATGTAGTTTTC 57.294 37.500 29.52 19.39 39.39 2.29
2588 3321 6.220201 TCTTGACACATCGATGTAGTTTTCA 58.780 36.000 29.52 21.36 39.39 2.69
2589 3322 5.839262 TGACACATCGATGTAGTTTTCAC 57.161 39.130 29.52 16.47 39.39 3.18
2590 3323 4.384547 TGACACATCGATGTAGTTTTCACG 59.615 41.667 29.52 16.40 39.39 4.35
2591 3324 4.304110 ACACATCGATGTAGTTTTCACGT 58.696 39.130 29.52 17.02 39.39 4.49
2592 3325 4.149922 ACACATCGATGTAGTTTTCACGTG 59.850 41.667 29.52 15.28 39.39 4.49
2593 3326 4.149922 CACATCGATGTAGTTTTCACGTGT 59.850 41.667 29.52 1.44 39.39 4.49
2594 3327 4.384846 ACATCGATGTAGTTTTCACGTGTC 59.615 41.667 29.05 1.01 39.68 3.67
2595 3328 3.967401 TCGATGTAGTTTTCACGTGTCA 58.033 40.909 16.51 0.17 0.00 3.58
2596 3329 3.732219 TCGATGTAGTTTTCACGTGTCAC 59.268 43.478 16.51 10.58 0.00 3.67
2609 3342 1.669440 TGTCACGTAGGACAAGGCC 59.331 57.895 6.27 0.00 44.34 5.19
2610 3343 1.116536 TGTCACGTAGGACAAGGCCA 61.117 55.000 5.01 0.00 44.34 5.36
2611 3344 0.389948 GTCACGTAGGACAAGGCCAG 60.390 60.000 5.01 0.00 37.73 4.85
2612 3345 0.830444 TCACGTAGGACAAGGCCAGT 60.830 55.000 5.01 2.07 0.00 4.00
2613 3346 0.670546 CACGTAGGACAAGGCCAGTG 60.671 60.000 5.01 4.97 0.00 3.66
2614 3347 1.119574 ACGTAGGACAAGGCCAGTGT 61.120 55.000 11.62 11.62 0.00 3.55
2615 3348 0.670546 CGTAGGACAAGGCCAGTGTG 60.671 60.000 16.19 5.58 0.00 3.82
2616 3349 0.396811 GTAGGACAAGGCCAGTGTGT 59.603 55.000 16.19 8.81 0.00 3.72
2617 3350 0.396435 TAGGACAAGGCCAGTGTGTG 59.604 55.000 16.19 1.36 0.00 3.82
2625 3358 3.286751 CCAGTGTGTGGGCGTTGG 61.287 66.667 0.00 0.00 43.63 3.77
2626 3359 2.203139 CAGTGTGTGGGCGTTGGA 60.203 61.111 0.00 0.00 0.00 3.53
2627 3360 2.111043 AGTGTGTGGGCGTTGGAG 59.889 61.111 0.00 0.00 0.00 3.86
2628 3361 2.110213 GTGTGTGGGCGTTGGAGA 59.890 61.111 0.00 0.00 0.00 3.71
2629 3362 1.525077 GTGTGTGGGCGTTGGAGAA 60.525 57.895 0.00 0.00 0.00 2.87
2630 3363 1.227823 TGTGTGGGCGTTGGAGAAG 60.228 57.895 0.00 0.00 0.00 2.85
2631 3364 1.227853 GTGTGGGCGTTGGAGAAGT 60.228 57.895 0.00 0.00 0.00 3.01
2632 3365 1.070786 TGTGGGCGTTGGAGAAGTC 59.929 57.895 0.00 0.00 0.00 3.01
2633 3366 2.027625 GTGGGCGTTGGAGAAGTCG 61.028 63.158 0.00 0.00 0.00 4.18
2634 3367 3.119096 GGGCGTTGGAGAAGTCGC 61.119 66.667 0.00 0.00 46.42 5.19
2636 3369 3.119096 GCGTTGGAGAAGTCGCCC 61.119 66.667 0.00 0.00 42.33 6.13
2637 3370 2.342279 CGTTGGAGAAGTCGCCCA 59.658 61.111 0.00 0.00 34.71 5.36
2638 3371 2.027625 CGTTGGAGAAGTCGCCCAC 61.028 63.158 0.00 0.00 34.71 4.61
2639 3372 1.070786 GTTGGAGAAGTCGCCCACA 59.929 57.895 0.00 0.00 32.91 4.17
2640 3373 1.070786 TTGGAGAAGTCGCCCACAC 59.929 57.895 0.00 0.00 34.71 3.82
2641 3374 2.432628 GGAGAAGTCGCCCACACG 60.433 66.667 0.00 0.00 0.00 4.49
2642 3375 3.112709 GAGAAGTCGCCCACACGC 61.113 66.667 0.00 0.00 0.00 5.34
2643 3376 4.681978 AGAAGTCGCCCACACGCC 62.682 66.667 0.00 0.00 0.00 5.68
2650 3383 3.747976 GCCCACACGCCCAACATC 61.748 66.667 0.00 0.00 0.00 3.06
2651 3384 2.282110 CCCACACGCCCAACATCA 60.282 61.111 0.00 0.00 0.00 3.07
2652 3385 2.625823 CCCACACGCCCAACATCAC 61.626 63.158 0.00 0.00 0.00 3.06
2653 3386 2.555782 CACACGCCCAACATCACG 59.444 61.111 0.00 0.00 0.00 4.35
2654 3387 3.353836 ACACGCCCAACATCACGC 61.354 61.111 0.00 0.00 0.00 5.34
2658 3391 3.361977 GCCCAACATCACGCGGTT 61.362 61.111 12.47 1.03 0.00 4.44
2659 3392 2.560861 CCCAACATCACGCGGTTG 59.439 61.111 12.47 14.75 43.02 3.77
2660 3393 2.126888 CCAACATCACGCGGTTGC 60.127 61.111 12.47 0.00 42.26 4.17
2661 3394 2.126888 CAACATCACGCGGTTGCC 60.127 61.111 12.47 0.00 38.08 4.52
2662 3395 2.593148 AACATCACGCGGTTGCCA 60.593 55.556 12.47 0.00 38.08 4.92
2663 3396 2.616330 AACATCACGCGGTTGCCAG 61.616 57.895 12.47 0.00 38.08 4.85
2664 3397 4.465512 CATCACGCGGTTGCCAGC 62.466 66.667 12.47 0.00 38.08 4.85
2665 3398 4.704833 ATCACGCGGTTGCCAGCT 62.705 61.111 12.47 0.00 38.08 4.24
2676 3409 2.260434 GCCAGCTGCATTGTGTGG 59.740 61.111 8.66 0.08 40.77 4.17
2677 3410 2.967397 CCAGCTGCATTGTGTGGG 59.033 61.111 8.66 0.00 0.00 4.61
2678 3411 2.260434 CAGCTGCATTGTGTGGGC 59.740 61.111 0.00 0.00 0.00 5.36
2679 3412 2.203523 AGCTGCATTGTGTGGGCA 60.204 55.556 1.02 0.00 35.96 5.36
2680 3413 1.833492 AGCTGCATTGTGTGGGCAA 60.833 52.632 1.02 0.00 37.06 4.52
2681 3414 1.069427 GCTGCATTGTGTGGGCAAA 59.931 52.632 0.00 0.00 37.06 3.68
2682 3415 1.223417 GCTGCATTGTGTGGGCAAAC 61.223 55.000 0.00 0.00 37.06 2.93
2683 3416 0.390124 CTGCATTGTGTGGGCAAACT 59.610 50.000 0.00 0.00 37.06 2.66
2684 3417 1.612950 CTGCATTGTGTGGGCAAACTA 59.387 47.619 0.00 0.00 37.06 2.24
2685 3418 1.612950 TGCATTGTGTGGGCAAACTAG 59.387 47.619 0.00 0.00 34.05 2.57
2686 3419 1.613437 GCATTGTGTGGGCAAACTAGT 59.387 47.619 0.00 0.00 31.63 2.57
2687 3420 2.035832 GCATTGTGTGGGCAAACTAGTT 59.964 45.455 1.12 1.12 31.63 2.24
2688 3421 3.492482 GCATTGTGTGGGCAAACTAGTTT 60.492 43.478 15.22 15.22 31.63 2.66
2689 3422 4.298332 CATTGTGTGGGCAAACTAGTTTC 58.702 43.478 18.00 12.36 31.63 2.78
2690 3423 3.290948 TGTGTGGGCAAACTAGTTTCT 57.709 42.857 18.00 0.00 0.00 2.52
2691 3424 2.948979 TGTGTGGGCAAACTAGTTTCTG 59.051 45.455 18.00 10.20 0.00 3.02
2692 3425 1.953686 TGTGGGCAAACTAGTTTCTGC 59.046 47.619 18.00 18.94 0.00 4.26
2693 3426 2.230660 GTGGGCAAACTAGTTTCTGCT 58.769 47.619 24.40 2.05 0.00 4.24
2694 3427 2.226674 GTGGGCAAACTAGTTTCTGCTC 59.773 50.000 24.40 22.61 0.00 4.26
2695 3428 2.158682 TGGGCAAACTAGTTTCTGCTCA 60.159 45.455 24.54 24.54 31.99 4.26
2696 3429 2.226674 GGGCAAACTAGTTTCTGCTCAC 59.773 50.000 24.40 14.98 0.00 3.51
2697 3430 2.878406 GGCAAACTAGTTTCTGCTCACA 59.122 45.455 24.40 0.00 0.00 3.58
2698 3431 3.304057 GGCAAACTAGTTTCTGCTCACAC 60.304 47.826 24.40 9.78 0.00 3.82
2699 3432 3.312421 GCAAACTAGTTTCTGCTCACACA 59.688 43.478 18.00 0.00 0.00 3.72
2700 3433 4.553547 GCAAACTAGTTTCTGCTCACACAG 60.554 45.833 18.00 3.99 39.12 3.66
2708 3441 2.980233 GCTCACACAGCCACCACC 60.980 66.667 0.00 0.00 43.17 4.61
2709 3442 2.831770 CTCACACAGCCACCACCT 59.168 61.111 0.00 0.00 0.00 4.00
2710 3443 2.057830 CTCACACAGCCACCACCTA 58.942 57.895 0.00 0.00 0.00 3.08
2711 3444 0.036952 CTCACACAGCCACCACCTAG 60.037 60.000 0.00 0.00 0.00 3.02
2712 3445 0.762842 TCACACAGCCACCACCTAGT 60.763 55.000 0.00 0.00 0.00 2.57
2713 3446 0.108585 CACACAGCCACCACCTAGTT 59.891 55.000 0.00 0.00 0.00 2.24
2714 3447 0.396811 ACACAGCCACCACCTAGTTC 59.603 55.000 0.00 0.00 0.00 3.01
2715 3448 0.396435 CACAGCCACCACCTAGTTCA 59.604 55.000 0.00 0.00 0.00 3.18
2716 3449 0.396811 ACAGCCACCACCTAGTTCAC 59.603 55.000 0.00 0.00 0.00 3.18
2717 3450 0.670546 CAGCCACCACCTAGTTCACG 60.671 60.000 0.00 0.00 0.00 4.35
2718 3451 2.033194 GCCACCACCTAGTTCACGC 61.033 63.158 0.00 0.00 0.00 5.34
2719 3452 1.736645 CCACCACCTAGTTCACGCG 60.737 63.158 3.53 3.53 0.00 6.01
2720 3453 2.048503 ACCACCTAGTTCACGCGC 60.049 61.111 5.73 0.00 0.00 6.86
2721 3454 3.179265 CCACCTAGTTCACGCGCG 61.179 66.667 30.96 30.96 0.00 6.86
2722 3455 2.430244 CACCTAGTTCACGCGCGT 60.430 61.111 32.73 32.73 0.00 6.01
2737 3470 2.972505 CGTGTGGGCGAACTGCTT 60.973 61.111 0.00 0.00 45.43 3.91
2738 3471 2.542907 CGTGTGGGCGAACTGCTTT 61.543 57.895 0.00 0.00 45.43 3.51
2739 3472 1.733526 GTGTGGGCGAACTGCTTTT 59.266 52.632 0.00 0.00 45.43 2.27
2740 3473 0.594796 GTGTGGGCGAACTGCTTTTG 60.595 55.000 0.00 0.00 45.43 2.44
2741 3474 1.661509 GTGGGCGAACTGCTTTTGC 60.662 57.895 3.00 3.00 45.43 3.68
2744 3477 2.727544 GCGAACTGCTTTTGCCCA 59.272 55.556 0.00 0.00 46.87 5.36
2745 3478 1.661509 GCGAACTGCTTTTGCCCAC 60.662 57.895 0.00 0.00 46.87 4.61
2746 3479 1.732917 CGAACTGCTTTTGCCCACA 59.267 52.632 0.00 0.00 46.87 4.17
2747 3480 0.314935 CGAACTGCTTTTGCCCACAT 59.685 50.000 0.00 0.00 46.87 3.21
2748 3481 1.787012 GAACTGCTTTTGCCCACATG 58.213 50.000 0.00 0.00 46.87 3.21
2749 3482 1.340889 GAACTGCTTTTGCCCACATGA 59.659 47.619 0.00 0.00 46.87 3.07
2750 3483 0.675633 ACTGCTTTTGCCCACATGAC 59.324 50.000 0.00 0.00 46.87 3.06
2751 3484 0.675083 CTGCTTTTGCCCACATGACA 59.325 50.000 0.00 0.00 46.87 3.58
2752 3485 0.675083 TGCTTTTGCCCACATGACAG 59.325 50.000 0.00 0.00 46.87 3.51
2753 3486 0.675633 GCTTTTGCCCACATGACAGT 59.324 50.000 0.00 0.00 40.15 3.55
2754 3487 1.336240 GCTTTTGCCCACATGACAGTC 60.336 52.381 0.00 0.00 40.15 3.51
2755 3488 1.955778 CTTTTGCCCACATGACAGTCA 59.044 47.619 5.50 5.50 0.00 3.41
2756 3489 2.291209 TTTGCCCACATGACAGTCAT 57.709 45.000 10.53 10.53 37.65 3.06
2757 3490 3.431673 TTTGCCCACATGACAGTCATA 57.568 42.857 15.98 0.00 34.28 2.15
2758 3491 3.650281 TTGCCCACATGACAGTCATAT 57.350 42.857 15.98 1.35 34.28 1.78
2759 3492 2.921821 TGCCCACATGACAGTCATATG 58.078 47.619 15.98 14.98 34.28 1.78
2760 3493 2.239402 TGCCCACATGACAGTCATATGT 59.761 45.455 18.54 11.71 34.28 2.29
2761 3494 3.282021 GCCCACATGACAGTCATATGTT 58.718 45.455 18.54 1.55 34.28 2.71
2762 3495 3.065786 GCCCACATGACAGTCATATGTTG 59.934 47.826 18.54 11.33 34.28 3.33
2763 3496 4.264253 CCCACATGACAGTCATATGTTGT 58.736 43.478 18.54 10.37 34.28 3.32
2764 3497 4.701651 CCCACATGACAGTCATATGTTGTT 59.298 41.667 18.54 0.00 34.28 2.83
2765 3498 5.392272 CCCACATGACAGTCATATGTTGTTG 60.392 44.000 18.54 9.05 34.28 3.33
2766 3499 5.392272 CCACATGACAGTCATATGTTGTTGG 60.392 44.000 18.54 12.25 34.28 3.77
2767 3500 5.412286 CACATGACAGTCATATGTTGTTGGA 59.588 40.000 15.98 5.54 34.28 3.53
2768 3501 6.094464 CACATGACAGTCATATGTTGTTGGAT 59.906 38.462 15.98 7.01 34.28 3.41
2769 3502 6.094464 ACATGACAGTCATATGTTGTTGGATG 59.906 38.462 15.98 15.88 34.28 3.51
2770 3503 4.943093 TGACAGTCATATGTTGTTGGATGG 59.057 41.667 13.98 0.00 32.25 3.51
2771 3504 3.696051 ACAGTCATATGTTGTTGGATGGC 59.304 43.478 1.90 0.00 0.00 4.40
2772 3505 3.695556 CAGTCATATGTTGTTGGATGGCA 59.304 43.478 1.90 0.00 0.00 4.92
2773 3506 4.158209 CAGTCATATGTTGTTGGATGGCAA 59.842 41.667 1.90 0.00 0.00 4.52
2774 3507 4.158394 AGTCATATGTTGTTGGATGGCAAC 59.842 41.667 1.90 0.00 43.60 4.17
2775 3508 4.158394 GTCATATGTTGTTGGATGGCAACT 59.842 41.667 1.90 0.00 43.66 3.16
2776 3509 4.158209 TCATATGTTGTTGGATGGCAACTG 59.842 41.667 1.90 0.50 43.66 3.16
2777 3510 0.388659 TGTTGTTGGATGGCAACTGC 59.611 50.000 8.54 0.00 43.66 4.40
2778 3511 0.388659 GTTGTTGGATGGCAACTGCA 59.611 50.000 3.76 0.00 44.36 4.41
2779 3512 0.675083 TTGTTGGATGGCAACTGCAG 59.325 50.000 13.48 13.48 44.36 4.41
2780 3513 0.467844 TGTTGGATGGCAACTGCAGT 60.468 50.000 15.25 15.25 44.36 4.40
2781 3514 0.675633 GTTGGATGGCAACTGCAGTT 59.324 50.000 26.36 26.36 44.36 3.16
2790 3523 3.073086 AACTGCAGTTGCGTGTACA 57.927 47.368 30.66 0.00 45.83 2.90
2791 3524 1.593196 AACTGCAGTTGCGTGTACAT 58.407 45.000 30.66 2.58 45.83 2.29
2792 3525 2.448926 ACTGCAGTTGCGTGTACATA 57.551 45.000 15.25 0.00 45.83 2.29
2793 3526 2.337583 ACTGCAGTTGCGTGTACATAG 58.662 47.619 15.25 0.00 45.83 2.23
2794 3527 1.061131 CTGCAGTTGCGTGTACATAGC 59.939 52.381 16.36 16.36 45.83 2.97
2795 3528 1.075542 GCAGTTGCGTGTACATAGCA 58.924 50.000 20.37 20.37 39.33 3.49
2796 3529 1.463056 GCAGTTGCGTGTACATAGCAA 59.537 47.619 26.99 26.99 46.91 3.91
2802 3535 4.379339 TGCGTGTACATAGCAACTATGA 57.621 40.909 21.49 2.40 44.55 2.15
2803 3536 4.944048 TGCGTGTACATAGCAACTATGAT 58.056 39.130 21.49 7.84 44.55 2.45
2804 3537 4.982295 TGCGTGTACATAGCAACTATGATC 59.018 41.667 21.49 11.93 44.55 2.92
2805 3538 4.088638 GCGTGTACATAGCAACTATGATCG 59.911 45.833 18.86 16.01 44.55 3.69
2806 3539 4.088638 CGTGTACATAGCAACTATGATCGC 59.911 45.833 18.86 15.01 44.55 4.58
2807 3540 5.223382 GTGTACATAGCAACTATGATCGCT 58.777 41.667 18.86 0.00 44.55 4.93
2808 3541 6.379386 GTGTACATAGCAACTATGATCGCTA 58.621 40.000 18.86 1.04 44.55 4.26
2809 3542 6.524933 GTGTACATAGCAACTATGATCGCTAG 59.475 42.308 18.86 3.07 44.55 3.42
2810 3543 5.966742 ACATAGCAACTATGATCGCTAGA 57.033 39.130 18.86 0.00 44.55 2.43
2811 3544 5.704888 ACATAGCAACTATGATCGCTAGAC 58.295 41.667 18.86 0.00 44.55 2.59
2812 3545 3.275400 AGCAACTATGATCGCTAGACG 57.725 47.619 8.65 0.00 45.62 4.18
2813 3546 2.030717 AGCAACTATGATCGCTAGACGG 60.031 50.000 8.65 0.92 43.89 4.79
2814 3547 2.320367 CAACTATGATCGCTAGACGGC 58.680 52.381 8.65 0.00 43.89 5.68
2815 3548 1.605753 ACTATGATCGCTAGACGGCA 58.394 50.000 8.65 0.20 43.89 5.69
2816 3549 1.954382 ACTATGATCGCTAGACGGCAA 59.046 47.619 8.65 0.00 43.89 4.52
2817 3550 2.558795 ACTATGATCGCTAGACGGCAAT 59.441 45.455 8.65 0.00 43.89 3.56
2818 3551 2.533266 ATGATCGCTAGACGGCAATT 57.467 45.000 0.00 0.00 43.89 2.32
2819 3552 3.660501 ATGATCGCTAGACGGCAATTA 57.339 42.857 0.00 0.00 43.89 1.40
2820 3553 2.739292 TGATCGCTAGACGGCAATTAC 58.261 47.619 0.00 0.00 43.89 1.89
2821 3554 2.100087 TGATCGCTAGACGGCAATTACA 59.900 45.455 0.00 0.00 43.89 2.41
2822 3555 2.203800 TCGCTAGACGGCAATTACAG 57.796 50.000 0.00 0.00 43.89 2.74
2823 3556 1.475280 TCGCTAGACGGCAATTACAGT 59.525 47.619 0.00 0.00 43.89 3.55
2824 3557 2.094390 TCGCTAGACGGCAATTACAGTT 60.094 45.455 0.00 0.00 43.89 3.16
2825 3558 2.029244 CGCTAGACGGCAATTACAGTTG 59.971 50.000 0.00 0.00 38.44 3.16
2830 3563 4.838959 GCAATTACAGTTGCGCGT 57.161 50.000 8.43 0.00 44.20 6.01
2831 3564 3.959520 GCAATTACAGTTGCGCGTA 57.040 47.368 8.43 0.00 44.20 4.42
2832 3565 1.520368 GCAATTACAGTTGCGCGTAC 58.480 50.000 8.43 6.69 44.20 3.67
2833 3566 1.136197 GCAATTACAGTTGCGCGTACA 60.136 47.619 8.43 0.00 44.20 2.90
2834 3567 2.475519 GCAATTACAGTTGCGCGTACAT 60.476 45.455 8.43 2.01 44.20 2.29
2835 3568 3.090699 CAATTACAGTTGCGCGTACATG 58.909 45.455 8.43 7.15 0.00 3.21
2836 3569 1.072391 TTACAGTTGCGCGTACATGG 58.928 50.000 8.43 3.47 0.00 3.66
2837 3570 1.355796 TACAGTTGCGCGTACATGGC 61.356 55.000 8.43 0.00 0.00 4.40
2838 3571 2.358125 AGTTGCGCGTACATGGCA 60.358 55.556 8.43 0.00 34.35 4.92
2839 3572 1.963855 AGTTGCGCGTACATGGCAA 60.964 52.632 8.43 10.17 43.73 4.52
2840 3573 1.136565 GTTGCGCGTACATGGCAAT 59.863 52.632 8.43 0.00 46.90 3.56
2841 3574 0.861450 GTTGCGCGTACATGGCAATC 60.861 55.000 8.43 8.16 46.90 2.67
2842 3575 1.301677 TTGCGCGTACATGGCAATCA 61.302 50.000 8.43 0.00 41.34 2.57
2843 3576 1.010797 GCGCGTACATGGCAATCAG 60.011 57.895 8.43 0.00 0.00 2.90
2844 3577 1.428370 GCGCGTACATGGCAATCAGA 61.428 55.000 8.43 0.00 0.00 3.27
2845 3578 1.220529 CGCGTACATGGCAATCAGAT 58.779 50.000 0.00 0.00 0.00 2.90
2846 3579 2.403259 CGCGTACATGGCAATCAGATA 58.597 47.619 0.00 0.00 0.00 1.98
2847 3580 2.799978 CGCGTACATGGCAATCAGATAA 59.200 45.455 0.00 0.00 0.00 1.75
2848 3581 3.247411 CGCGTACATGGCAATCAGATAAA 59.753 43.478 0.00 0.00 0.00 1.40
2849 3582 4.527564 GCGTACATGGCAATCAGATAAAC 58.472 43.478 0.00 0.00 0.00 2.01
2850 3583 4.035091 GCGTACATGGCAATCAGATAAACA 59.965 41.667 0.00 0.00 0.00 2.83
2851 3584 5.277974 GCGTACATGGCAATCAGATAAACAT 60.278 40.000 0.00 0.00 0.00 2.71
2852 3585 6.073276 GCGTACATGGCAATCAGATAAACATA 60.073 38.462 0.00 0.00 0.00 2.29
2853 3586 7.290842 CGTACATGGCAATCAGATAAACATAC 58.709 38.462 0.00 0.00 0.00 2.39
2854 3587 7.042119 CGTACATGGCAATCAGATAAACATACA 60.042 37.037 0.00 0.00 0.00 2.29
2855 3588 7.828508 ACATGGCAATCAGATAAACATACAT 57.171 32.000 0.00 0.00 0.00 2.29
2856 3589 7.654568 ACATGGCAATCAGATAAACATACATG 58.345 34.615 0.00 0.00 37.44 3.21
2857 3590 7.286087 ACATGGCAATCAGATAAACATACATGT 59.714 33.333 2.69 2.69 44.20 3.21
2858 3591 7.263100 TGGCAATCAGATAAACATACATGTC 57.737 36.000 0.00 0.00 40.80 3.06
2859 3592 6.827762 TGGCAATCAGATAAACATACATGTCA 59.172 34.615 0.00 0.00 40.80 3.58
2860 3593 7.338957 TGGCAATCAGATAAACATACATGTCAA 59.661 33.333 0.00 0.00 40.80 3.18
2861 3594 7.645340 GGCAATCAGATAAACATACATGTCAAC 59.355 37.037 0.00 0.00 40.80 3.18
2862 3595 8.400947 GCAATCAGATAAACATACATGTCAACT 58.599 33.333 0.00 0.00 40.80 3.16
2863 3596 9.712359 CAATCAGATAAACATACATGTCAACTG 57.288 33.333 0.00 0.00 40.80 3.16
2864 3597 9.453572 AATCAGATAAACATACATGTCAACTGT 57.546 29.630 0.00 0.00 40.80 3.55
2865 3598 8.255394 TCAGATAAACATACATGTCAACTGTG 57.745 34.615 0.00 0.00 40.80 3.66
2866 3599 8.093927 TCAGATAAACATACATGTCAACTGTGA 58.906 33.333 0.00 0.00 40.80 3.58
2867 3600 8.886719 CAGATAAACATACATGTCAACTGTGAT 58.113 33.333 0.00 0.68 40.80 3.06
2868 3601 9.453572 AGATAAACATACATGTCAACTGTGATT 57.546 29.630 0.00 0.00 40.80 2.57
2872 3605 7.377766 ACATACATGTCAACTGTGATTAACC 57.622 36.000 0.00 0.00 35.87 2.85
2873 3606 6.939730 ACATACATGTCAACTGTGATTAACCA 59.060 34.615 0.00 0.00 35.87 3.67
2874 3607 5.689383 ACATGTCAACTGTGATTAACCAC 57.311 39.130 0.00 0.00 35.80 4.16
2875 3608 5.376625 ACATGTCAACTGTGATTAACCACT 58.623 37.500 0.71 0.00 37.89 4.00
2876 3609 6.530120 ACATGTCAACTGTGATTAACCACTA 58.470 36.000 0.71 0.00 37.89 2.74
2877 3610 6.650807 ACATGTCAACTGTGATTAACCACTAG 59.349 38.462 0.71 0.08 37.89 2.57
2878 3611 6.169557 TGTCAACTGTGATTAACCACTAGT 57.830 37.500 0.71 0.70 37.89 2.57
2879 3612 5.989168 TGTCAACTGTGATTAACCACTAGTG 59.011 40.000 16.34 16.34 37.89 2.74
2880 3613 5.408604 GTCAACTGTGATTAACCACTAGTGG 59.591 44.000 35.54 35.54 45.52 4.00
2881 3614 7.994060 GTCAACTGTGATTAACCACTAGTGGC 61.994 46.154 36.77 22.48 44.65 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 15 6.760298 TGCATCAAGTTTCAGCAATTAAAACA 59.240 30.769 0.00 0.00 35.77 2.83
48 50 9.906660 TTGCTCATACCAAGTTTTAAGTATTTG 57.093 29.630 0.00 0.00 0.00 2.32
58 60 2.778299 TCGCTTGCTCATACCAAGTTT 58.222 42.857 3.47 0.00 41.27 2.66
89 91 7.160547 AGTTTGAAGTTTTAGGTTCCGAAAA 57.839 32.000 5.92 5.92 0.00 2.29
94 97 8.440059 CACAAAAAGTTTGAAGTTTTAGGTTCC 58.560 33.333 7.68 0.00 39.82 3.62
95 98 8.984764 ACACAAAAAGTTTGAAGTTTTAGGTTC 58.015 29.630 7.68 0.00 39.82 3.62
116 119 2.088423 GATTTCGTATGGGGCACACAA 58.912 47.619 0.00 0.00 0.00 3.33
121 124 1.757682 GTTGGATTTCGTATGGGGCA 58.242 50.000 0.00 0.00 0.00 5.36
122 125 0.661020 CGTTGGATTTCGTATGGGGC 59.339 55.000 0.00 0.00 0.00 5.80
125 128 4.552767 GCAATCTCGTTGGATTTCGTATGG 60.553 45.833 0.00 0.00 38.29 2.74
126 129 4.518217 GCAATCTCGTTGGATTTCGTATG 58.482 43.478 0.00 0.00 38.29 2.39
127 130 3.245284 CGCAATCTCGTTGGATTTCGTAT 59.755 43.478 10.19 0.00 37.49 3.06
128 131 2.601314 CGCAATCTCGTTGGATTTCGTA 59.399 45.455 10.19 0.00 37.49 3.43
129 132 1.393539 CGCAATCTCGTTGGATTTCGT 59.606 47.619 10.19 0.00 37.49 3.85
144 147 0.464373 ATTGCCTCACGATCCGCAAT 60.464 50.000 10.28 10.28 44.43 3.56
150 153 3.324035 GCCGATTGCCTCACGATC 58.676 61.111 0.00 0.00 36.00 3.69
169 172 3.376078 CGCACCTGCCCAGCAAAT 61.376 61.111 0.00 0.00 38.41 2.32
170 173 4.892965 ACGCACCTGCCCAGCAAA 62.893 61.111 0.00 0.00 38.41 3.68
193 202 3.701040 CCCCACTCCATTGGAAACTTATG 59.299 47.826 6.88 0.00 39.24 1.90
195 204 2.719705 ACCCCACTCCATTGGAAACTTA 59.280 45.455 6.88 0.00 39.24 2.24
196 205 1.503347 ACCCCACTCCATTGGAAACTT 59.497 47.619 6.88 0.00 39.24 2.66
204 213 1.307647 GGCATGACCCCACTCCATT 59.692 57.895 0.00 0.00 0.00 3.16
205 214 3.010144 GGCATGACCCCACTCCAT 58.990 61.111 0.00 0.00 0.00 3.41
223 232 5.238583 GCTGCCCTTACAATATACCACTAG 58.761 45.833 0.00 0.00 0.00 2.57
229 238 3.064931 GGACGCTGCCCTTACAATATAC 58.935 50.000 0.00 0.00 0.00 1.47
238 247 2.711922 CGAGTAGGACGCTGCCCTT 61.712 63.158 2.74 0.00 35.30 3.95
248 257 3.361281 ACTATGTGTCCACGAGTAGGA 57.639 47.619 0.00 0.00 31.07 2.94
268 277 7.093945 GCCACTGAACTCCAATTTATCCTTTTA 60.094 37.037 0.00 0.00 0.00 1.52
273 282 4.016444 TGCCACTGAACTCCAATTTATCC 58.984 43.478 0.00 0.00 0.00 2.59
274 283 5.841957 ATGCCACTGAACTCCAATTTATC 57.158 39.130 0.00 0.00 0.00 1.75
278 287 3.499338 TGAATGCCACTGAACTCCAATT 58.501 40.909 0.00 0.00 0.00 2.32
284 293 3.290710 ACACTTTGAATGCCACTGAACT 58.709 40.909 0.00 0.00 0.00 3.01
304 314 6.144078 AGGGTTTCATGTTCAAAAGTGTAC 57.856 37.500 0.00 0.00 0.00 2.90
307 317 6.391227 AGTAGGGTTTCATGTTCAAAAGTG 57.609 37.500 0.00 0.00 0.00 3.16
338 348 8.573885 TCGCTAAAGAGATCTTTATTTATCGGA 58.426 33.333 20.15 11.63 44.56 4.55
340 350 9.400638 AGTCGCTAAAGAGATCTTTATTTATCG 57.599 33.333 13.86 17.28 44.56 2.92
368 378 3.555586 GCATGGGTGAAGCACAAGAAAAT 60.556 43.478 0.00 0.00 35.86 1.82
373 383 0.892755 ATGCATGGGTGAAGCACAAG 59.107 50.000 0.00 0.00 41.60 3.16
382 392 2.158564 AGATCAAGGGTATGCATGGGTG 60.159 50.000 10.16 0.50 0.00 4.61
500 511 2.093658 AGTATAAGCACGTTGGTCTGGG 60.094 50.000 0.00 0.00 0.00 4.45
540 553 6.039941 TGCCCCCAAATACTGAATTATTTACG 59.960 38.462 0.00 0.00 31.68 3.18
546 559 4.161377 GCTTTGCCCCCAAATACTGAATTA 59.839 41.667 0.00 0.00 39.98 1.40
588 602 2.676342 GCTGGTTGGATTTACACGTAGG 59.324 50.000 0.00 0.00 0.00 3.18
649 664 0.870307 AGTCGTGCGCTAATTAGCCG 60.870 55.000 27.57 24.21 46.34 5.52
693 708 2.587753 CTGCGTGTTGACGGTGGT 60.588 61.111 0.00 0.00 46.20 4.16
748 775 1.658994 TCAGTGACACGACCCAAAAC 58.341 50.000 0.00 0.00 0.00 2.43
800 827 2.108362 CTACCGCGGGGAATCCAC 59.892 66.667 31.76 0.00 36.97 4.02
827 854 6.125327 ACTGTACGTGTGATCTGATCTTAG 57.875 41.667 17.82 9.51 0.00 2.18
851 878 3.896272 GACCCCAGAATCGGATAAGTACT 59.104 47.826 0.00 0.00 0.00 2.73
852 879 3.006644 GGACCCCAGAATCGGATAAGTAC 59.993 52.174 0.00 0.00 0.00 2.73
853 880 3.116862 AGGACCCCAGAATCGGATAAGTA 60.117 47.826 0.00 0.00 0.00 2.24
882 909 2.435938 GGAAACAGATCCGCGCCA 60.436 61.111 0.00 0.00 0.00 5.69
926 956 4.603231 TGTTGTTGTAGTTCGTTTCCAC 57.397 40.909 0.00 0.00 0.00 4.02
936 966 6.386654 CCAAGAAGTTTGTTGTTGTTGTAGT 58.613 36.000 1.78 0.00 30.21 2.73
937 967 5.804979 CCCAAGAAGTTTGTTGTTGTTGTAG 59.195 40.000 1.78 0.00 30.21 2.74
938 968 5.715070 CCCAAGAAGTTTGTTGTTGTTGTA 58.285 37.500 1.78 0.00 30.21 2.41
941 971 3.260632 AGCCCAAGAAGTTTGTTGTTGTT 59.739 39.130 1.78 0.00 30.21 2.83
961 991 0.955919 GTACTGGGTGCAGTCCAAGC 60.956 60.000 9.66 0.90 36.68 4.01
1014 1044 1.089920 ACGTGCCTACCTAGTACGTG 58.910 55.000 6.25 0.00 40.86 4.49
1077 1122 2.740714 GAGTCAACCATCGGTGCGC 61.741 63.158 0.00 0.00 35.34 6.09
1127 1172 4.803426 GAGCACCGCCACGAGGAG 62.803 72.222 1.86 0.00 36.89 3.69
1187 1232 3.764466 CTGCTTCGCCTCCTCGGT 61.764 66.667 0.00 0.00 34.25 4.69
1591 1654 2.141122 AAATTCCCCAACGCACGCAG 62.141 55.000 0.00 0.00 0.00 5.18
1632 1695 7.977853 CCGAATACACAAAACTACTACCAGTAT 59.022 37.037 0.00 0.00 29.08 2.12
1633 1696 7.176515 TCCGAATACACAAAACTACTACCAGTA 59.823 37.037 0.00 0.00 0.00 2.74
1634 1697 6.015180 TCCGAATACACAAAACTACTACCAGT 60.015 38.462 0.00 0.00 0.00 4.00
1635 1698 6.392354 TCCGAATACACAAAACTACTACCAG 58.608 40.000 0.00 0.00 0.00 4.00
1636 1699 6.343716 TCCGAATACACAAAACTACTACCA 57.656 37.500 0.00 0.00 0.00 3.25
1637 1700 5.809051 CCTCCGAATACACAAAACTACTACC 59.191 44.000 0.00 0.00 0.00 3.18
1638 1701 5.809051 CCCTCCGAATACACAAAACTACTAC 59.191 44.000 0.00 0.00 0.00 2.73
1735 1798 7.042725 GCTTGTCAAAAACCACTAAAGAAATCC 60.043 37.037 0.00 0.00 0.00 3.01
1801 1893 6.936335 TCATCATCACACCGATATAAATTGCT 59.064 34.615 0.00 0.00 31.20 3.91
1802 1894 7.017645 GTCATCATCACACCGATATAAATTGC 58.982 38.462 0.00 0.00 31.20 3.56
1813 1905 4.035558 CCTAAATTGGTCATCATCACACCG 59.964 45.833 0.00 0.00 32.27 4.94
1837 1929 3.196463 CAGAAAATTGTGGTGCTTGCAA 58.804 40.909 0.00 0.00 0.00 4.08
1888 2061 5.045872 TGACGAGTTTAGATGATGAGCATG 58.954 41.667 0.00 0.00 37.34 4.06
1907 2080 3.575630 TCTTTGTTCTTCGAGGATGACG 58.424 45.455 0.00 0.00 0.00 4.35
1909 2082 8.615878 TTTAAATCTTTGTTCTTCGAGGATGA 57.384 30.769 0.00 0.00 0.00 2.92
1943 2116 8.387039 TGCCCAAAAACCTATAGCACATATATA 58.613 33.333 0.00 0.00 0.00 0.86
1944 2117 7.176690 GTGCCCAAAAACCTATAGCACATATAT 59.823 37.037 7.30 0.00 46.32 0.86
1945 2118 6.488683 GTGCCCAAAAACCTATAGCACATATA 59.511 38.462 7.30 0.00 46.32 0.86
1946 2119 5.301805 GTGCCCAAAAACCTATAGCACATAT 59.698 40.000 7.30 0.00 46.32 1.78
1947 2120 4.642885 GTGCCCAAAAACCTATAGCACATA 59.357 41.667 7.30 0.00 46.32 2.29
1948 2121 3.447229 GTGCCCAAAAACCTATAGCACAT 59.553 43.478 7.30 0.00 46.32 3.21
1949 2122 2.823154 GTGCCCAAAAACCTATAGCACA 59.177 45.455 7.30 0.00 46.32 4.57
1950 2123 2.165641 GGTGCCCAAAAACCTATAGCAC 59.834 50.000 3.72 3.72 46.33 4.40
1951 2124 2.225142 TGGTGCCCAAAAACCTATAGCA 60.225 45.455 0.00 0.00 37.36 3.49
1952 2125 2.452505 TGGTGCCCAAAAACCTATAGC 58.547 47.619 0.00 0.00 37.36 2.97
1953 2126 3.181476 GCATGGTGCCCAAAAACCTATAG 60.181 47.826 0.00 0.00 36.95 1.31
1954 2127 2.763448 GCATGGTGCCCAAAAACCTATA 59.237 45.455 0.00 0.00 36.95 1.31
1955 2128 1.554617 GCATGGTGCCCAAAAACCTAT 59.445 47.619 0.00 0.00 36.95 2.57
1964 2137 1.799157 AAAGGGTAGCATGGTGCCCA 61.799 55.000 40.78 7.42 46.52 5.36
2053 2226 9.764363 TTTCATGGATCTGTAGTGAATACATAC 57.236 33.333 0.00 0.00 43.44 2.39
2059 2232 8.585471 ACAAATTTCATGGATCTGTAGTGAAT 57.415 30.769 0.00 0.00 0.00 2.57
2060 2233 8.408043 AACAAATTTCATGGATCTGTAGTGAA 57.592 30.769 0.00 0.00 0.00 3.18
2180 2354 5.390613 ACTTTCACACGTTTGTTCAAAGAG 58.609 37.500 16.67 0.56 36.92 2.85
2191 2365 6.613233 TCACAACATTTTACTTTCACACGTT 58.387 32.000 0.00 0.00 0.00 3.99
2192 2366 6.184580 TCACAACATTTTACTTTCACACGT 57.815 33.333 0.00 0.00 0.00 4.49
2193 2367 7.499438 TTTCACAACATTTTACTTTCACACG 57.501 32.000 0.00 0.00 0.00 4.49
2229 2404 4.082408 ACACGCACACACATGTATACTACT 60.082 41.667 0.00 0.00 36.72 2.57
2230 2405 4.171005 ACACGCACACACATGTATACTAC 58.829 43.478 0.00 0.00 36.72 2.73
2271 2450 6.859420 AAACCATTTTCTAAAGCGCAAAAT 57.141 29.167 11.47 9.90 31.30 1.82
2481 3214 4.477780 ACGTGTGGGCGTTATTATTTTTG 58.522 39.130 0.00 0.00 43.04 2.44
2482 3215 4.769859 ACGTGTGGGCGTTATTATTTTT 57.230 36.364 0.00 0.00 43.04 1.94
2484 3217 4.273969 CCATACGTGTGGGCGTTATTATTT 59.726 41.667 22.66 0.00 43.04 1.40
2485 3218 3.810941 CCATACGTGTGGGCGTTATTATT 59.189 43.478 22.66 0.00 43.04 1.40
2486 3219 3.395639 CCATACGTGTGGGCGTTATTAT 58.604 45.455 22.66 0.00 43.04 1.28
2487 3220 2.823984 CCATACGTGTGGGCGTTATTA 58.176 47.619 22.66 0.00 43.04 0.98
2488 3221 1.658994 CCATACGTGTGGGCGTTATT 58.341 50.000 22.66 0.00 43.04 1.40
2489 3222 0.812412 GCCATACGTGTGGGCGTTAT 60.812 55.000 29.62 0.00 43.04 1.89
2490 3223 1.448189 GCCATACGTGTGGGCGTTA 60.448 57.895 29.62 0.00 43.04 3.18
2491 3224 2.744709 GCCATACGTGTGGGCGTT 60.745 61.111 29.62 0.00 43.04 4.84
2495 3228 1.173043 ATGTTTGCCATACGTGTGGG 58.827 50.000 29.62 14.57 39.73 4.61
2496 3229 2.594321 CAATGTTTGCCATACGTGTGG 58.406 47.619 25.60 25.60 42.35 4.17
2508 3241 2.886862 TGGGTGAGTTGCAATGTTTG 57.113 45.000 0.59 0.00 0.00 2.93
2509 3242 4.527816 ACATATGGGTGAGTTGCAATGTTT 59.472 37.500 0.59 0.00 0.00 2.83
2510 3243 4.088634 ACATATGGGTGAGTTGCAATGTT 58.911 39.130 0.59 0.00 0.00 2.71
2511 3244 3.696051 GACATATGGGTGAGTTGCAATGT 59.304 43.478 0.59 0.00 0.00 2.71
2512 3245 3.949754 AGACATATGGGTGAGTTGCAATG 59.050 43.478 0.59 0.00 0.00 2.82
2513 3246 3.949754 CAGACATATGGGTGAGTTGCAAT 59.050 43.478 0.59 0.00 0.00 3.56
2514 3247 3.346315 CAGACATATGGGTGAGTTGCAA 58.654 45.455 7.80 0.00 0.00 4.08
2515 3248 2.356022 CCAGACATATGGGTGAGTTGCA 60.356 50.000 7.80 0.00 36.64 4.08
2516 3249 2.292267 CCAGACATATGGGTGAGTTGC 58.708 52.381 7.80 0.00 36.64 4.17
2517 3250 2.292267 GCCAGACATATGGGTGAGTTG 58.708 52.381 7.80 0.00 40.97 3.16
2518 3251 2.717639 GCCAGACATATGGGTGAGTT 57.282 50.000 7.80 0.00 40.97 3.01
2524 3257 1.345741 ACGATGAGCCAGACATATGGG 59.654 52.381 7.80 0.00 40.97 4.00
2525 3258 2.611473 GGACGATGAGCCAGACATATGG 60.611 54.545 7.80 0.00 43.72 2.74
2526 3259 2.036346 TGGACGATGAGCCAGACATATG 59.964 50.000 0.00 0.00 0.00 1.78
2527 3260 2.319844 TGGACGATGAGCCAGACATAT 58.680 47.619 0.00 0.00 0.00 1.78
2528 3261 1.775385 TGGACGATGAGCCAGACATA 58.225 50.000 0.00 0.00 0.00 2.29
2529 3262 2.595558 TGGACGATGAGCCAGACAT 58.404 52.632 0.00 0.00 0.00 3.06
2530 3263 4.111967 TGGACGATGAGCCAGACA 57.888 55.556 0.00 0.00 0.00 3.41
2534 3267 1.899814 ACTTAACTGGACGATGAGCCA 59.100 47.619 0.00 0.00 0.00 4.75
2535 3268 2.674796 ACTTAACTGGACGATGAGCC 57.325 50.000 0.00 0.00 0.00 4.70
2536 3269 3.424962 GCAAACTTAACTGGACGATGAGC 60.425 47.826 0.00 0.00 0.00 4.26
2537 3270 3.745975 TGCAAACTTAACTGGACGATGAG 59.254 43.478 0.00 0.00 0.00 2.90
2538 3271 3.496884 GTGCAAACTTAACTGGACGATGA 59.503 43.478 0.00 0.00 0.00 2.92
2539 3272 3.810373 GTGCAAACTTAACTGGACGATG 58.190 45.455 0.00 0.00 0.00 3.84
2543 3276 3.955771 TTCGTGCAAACTTAACTGGAC 57.044 42.857 0.00 0.00 0.00 4.02
2544 3277 4.385825 AGATTCGTGCAAACTTAACTGGA 58.614 39.130 0.00 0.00 0.00 3.86
2545 3278 4.749245 AGATTCGTGCAAACTTAACTGG 57.251 40.909 0.00 0.00 0.00 4.00
2546 3279 5.621228 GTCAAGATTCGTGCAAACTTAACTG 59.379 40.000 0.00 0.00 0.00 3.16
2547 3280 5.295787 TGTCAAGATTCGTGCAAACTTAACT 59.704 36.000 0.00 0.00 0.00 2.24
2548 3281 5.395486 GTGTCAAGATTCGTGCAAACTTAAC 59.605 40.000 0.00 0.00 0.00 2.01
2549 3282 5.065346 TGTGTCAAGATTCGTGCAAACTTAA 59.935 36.000 0.00 0.00 0.00 1.85
2550 3283 4.572795 TGTGTCAAGATTCGTGCAAACTTA 59.427 37.500 0.00 0.00 0.00 2.24
2551 3284 3.376859 TGTGTCAAGATTCGTGCAAACTT 59.623 39.130 0.00 0.00 0.00 2.66
2552 3285 2.942376 TGTGTCAAGATTCGTGCAAACT 59.058 40.909 0.00 0.00 0.00 2.66
2553 3286 3.332761 TGTGTCAAGATTCGTGCAAAC 57.667 42.857 0.00 0.00 0.00 2.93
2554 3287 3.363871 CGATGTGTCAAGATTCGTGCAAA 60.364 43.478 0.00 0.00 0.00 3.68
2555 3288 2.157474 CGATGTGTCAAGATTCGTGCAA 59.843 45.455 0.00 0.00 0.00 4.08
2556 3289 1.726248 CGATGTGTCAAGATTCGTGCA 59.274 47.619 0.00 0.00 0.00 4.57
2557 3290 1.992667 TCGATGTGTCAAGATTCGTGC 59.007 47.619 0.00 0.00 0.00 5.34
2558 3291 3.614176 ACATCGATGTGTCAAGATTCGTG 59.386 43.478 29.49 0.00 40.03 4.35
2559 3292 3.849911 ACATCGATGTGTCAAGATTCGT 58.150 40.909 29.49 0.08 40.03 3.85
2560 3293 5.037385 ACTACATCGATGTGTCAAGATTCG 58.963 41.667 35.46 15.08 41.89 3.34
2561 3294 6.893958 AACTACATCGATGTGTCAAGATTC 57.106 37.500 35.46 0.00 41.89 2.52
2562 3295 7.387673 TGAAAACTACATCGATGTGTCAAGATT 59.612 33.333 35.46 23.25 41.89 2.40
2563 3296 6.873605 TGAAAACTACATCGATGTGTCAAGAT 59.126 34.615 35.46 19.35 41.89 2.40
2564 3297 6.145534 GTGAAAACTACATCGATGTGTCAAGA 59.854 38.462 35.46 17.20 41.89 3.02
2565 3298 6.299604 GTGAAAACTACATCGATGTGTCAAG 58.700 40.000 35.46 27.09 41.89 3.02
2566 3299 5.107645 CGTGAAAACTACATCGATGTGTCAA 60.108 40.000 35.46 18.24 41.89 3.18
2567 3300 4.384547 CGTGAAAACTACATCGATGTGTCA 59.615 41.667 35.46 25.59 41.89 3.58
2568 3301 4.384846 ACGTGAAAACTACATCGATGTGTC 59.615 41.667 35.46 23.80 41.89 3.67
2569 3302 4.149922 CACGTGAAAACTACATCGATGTGT 59.850 41.667 35.46 27.25 41.89 3.72
2570 3303 4.149922 ACACGTGAAAACTACATCGATGTG 59.850 41.667 35.46 26.69 41.89 3.21
2571 3304 4.304110 ACACGTGAAAACTACATCGATGT 58.696 39.130 31.93 31.93 44.48 3.06
2572 3305 4.384547 TGACACGTGAAAACTACATCGATG 59.615 41.667 25.01 23.68 0.00 3.84
2573 3306 4.384846 GTGACACGTGAAAACTACATCGAT 59.615 41.667 25.01 0.00 0.00 3.59
2574 3307 3.732219 GTGACACGTGAAAACTACATCGA 59.268 43.478 25.01 0.00 0.00 3.59
2575 3308 3.420035 CGTGACACGTGAAAACTACATCG 60.420 47.826 25.01 7.82 36.74 3.84
2576 3309 4.036215 CGTGACACGTGAAAACTACATC 57.964 45.455 25.01 6.30 36.74 3.06
2589 3322 1.007336 GCCTTGTCCTACGTGACACG 61.007 60.000 25.72 25.72 44.55 4.49
2590 3323 0.669625 GGCCTTGTCCTACGTGACAC 60.670 60.000 8.13 0.00 44.55 3.67
2591 3324 1.116536 TGGCCTTGTCCTACGTGACA 61.117 55.000 3.32 4.71 43.26 3.58
2592 3325 0.389948 CTGGCCTTGTCCTACGTGAC 60.390 60.000 3.32 0.00 35.77 3.67
2593 3326 0.830444 ACTGGCCTTGTCCTACGTGA 60.830 55.000 3.32 0.00 0.00 4.35
2594 3327 0.670546 CACTGGCCTTGTCCTACGTG 60.671 60.000 3.32 0.00 0.00 4.49
2595 3328 1.119574 ACACTGGCCTTGTCCTACGT 61.120 55.000 3.32 0.00 0.00 3.57
2596 3329 0.670546 CACACTGGCCTTGTCCTACG 60.671 60.000 3.32 0.00 0.00 3.51
2597 3330 0.396811 ACACACTGGCCTTGTCCTAC 59.603 55.000 3.32 0.00 0.00 3.18
2598 3331 0.396435 CACACACTGGCCTTGTCCTA 59.604 55.000 3.32 0.00 0.00 2.94
2599 3332 1.149174 CACACACTGGCCTTGTCCT 59.851 57.895 3.32 0.00 0.00 3.85
2600 3333 1.898574 CCACACACTGGCCTTGTCC 60.899 63.158 3.32 0.00 31.36 4.02
2601 3334 1.898574 CCCACACACTGGCCTTGTC 60.899 63.158 3.32 0.00 39.01 3.18
2602 3335 2.195683 CCCACACACTGGCCTTGT 59.804 61.111 3.32 4.23 39.01 3.16
2603 3336 3.297620 GCCCACACACTGGCCTTG 61.298 66.667 3.32 3.47 41.97 3.61
2604 3337 4.954970 CGCCCACACACTGGCCTT 62.955 66.667 3.32 0.00 45.07 4.35
2607 3340 3.964875 CAACGCCCACACACTGGC 61.965 66.667 0.00 0.00 44.41 4.85
2608 3341 3.286751 CCAACGCCCACACACTGG 61.287 66.667 0.00 0.00 40.26 4.00
2609 3342 2.203139 TCCAACGCCCACACACTG 60.203 61.111 0.00 0.00 0.00 3.66
2610 3343 1.978455 TTCTCCAACGCCCACACACT 61.978 55.000 0.00 0.00 0.00 3.55
2611 3344 1.507141 CTTCTCCAACGCCCACACAC 61.507 60.000 0.00 0.00 0.00 3.82
2612 3345 1.227823 CTTCTCCAACGCCCACACA 60.228 57.895 0.00 0.00 0.00 3.72
2613 3346 1.227853 ACTTCTCCAACGCCCACAC 60.228 57.895 0.00 0.00 0.00 3.82
2614 3347 1.070786 GACTTCTCCAACGCCCACA 59.929 57.895 0.00 0.00 0.00 4.17
2615 3348 2.027625 CGACTTCTCCAACGCCCAC 61.028 63.158 0.00 0.00 0.00 4.61
2616 3349 2.342279 CGACTTCTCCAACGCCCA 59.658 61.111 0.00 0.00 0.00 5.36
2617 3350 3.119096 GCGACTTCTCCAACGCCC 61.119 66.667 0.00 0.00 44.27 6.13
2620 3353 2.027625 GTGGGCGACTTCTCCAACG 61.028 63.158 0.00 0.00 31.73 4.10
2621 3354 1.070786 TGTGGGCGACTTCTCCAAC 59.929 57.895 0.31 0.00 31.73 3.77
2622 3355 1.070786 GTGTGGGCGACTTCTCCAA 59.929 57.895 0.31 0.00 31.73 3.53
2623 3356 2.741092 GTGTGGGCGACTTCTCCA 59.259 61.111 0.31 0.00 0.00 3.86
2624 3357 2.432628 CGTGTGGGCGACTTCTCC 60.433 66.667 0.31 0.00 0.00 3.71
2625 3358 3.112709 GCGTGTGGGCGACTTCTC 61.113 66.667 0.31 0.00 0.00 2.87
2626 3359 4.681978 GGCGTGTGGGCGACTTCT 62.682 66.667 0.31 0.00 36.86 2.85
2633 3366 3.747976 GATGTTGGGCGTGTGGGC 61.748 66.667 0.00 0.00 41.35 5.36
2634 3367 2.282110 TGATGTTGGGCGTGTGGG 60.282 61.111 0.00 0.00 0.00 4.61
2635 3368 2.953821 GTGATGTTGGGCGTGTGG 59.046 61.111 0.00 0.00 0.00 4.17
2636 3369 2.555782 CGTGATGTTGGGCGTGTG 59.444 61.111 0.00 0.00 0.00 3.82
2637 3370 3.353836 GCGTGATGTTGGGCGTGT 61.354 61.111 0.00 0.00 0.00 4.49
2638 3371 4.444024 CGCGTGATGTTGGGCGTG 62.444 66.667 0.00 0.00 43.36 5.34
2641 3374 3.361977 AACCGCGTGATGTTGGGC 61.362 61.111 4.92 0.00 0.00 5.36
2642 3375 2.560861 CAACCGCGTGATGTTGGG 59.439 61.111 15.46 0.00 38.50 4.12
2643 3376 2.126888 GCAACCGCGTGATGTTGG 60.127 61.111 21.81 8.69 41.62 3.77
2644 3377 2.126888 GGCAACCGCGTGATGTTG 60.127 61.111 17.98 17.98 43.62 3.33
2645 3378 2.593148 TGGCAACCGCGTGATGTT 60.593 55.556 4.92 0.00 39.92 2.71
2646 3379 3.049674 CTGGCAACCGCGTGATGT 61.050 61.111 4.92 0.00 39.92 3.06
2647 3380 4.465512 GCTGGCAACCGCGTGATG 62.466 66.667 4.92 2.79 39.92 3.07
2648 3381 4.704833 AGCTGGCAACCGCGTGAT 62.705 61.111 4.92 0.00 39.92 3.06
2659 3392 2.260434 CCACACAATGCAGCTGGC 59.740 61.111 17.12 8.54 45.13 4.85
2660 3393 2.967397 CCCACACAATGCAGCTGG 59.033 61.111 17.12 0.31 0.00 4.85
2661 3394 2.089887 TTGCCCACACAATGCAGCTG 62.090 55.000 10.11 10.11 36.21 4.24
2662 3395 1.401318 TTTGCCCACACAATGCAGCT 61.401 50.000 0.00 0.00 36.21 4.24
2663 3396 1.069427 TTTGCCCACACAATGCAGC 59.931 52.632 0.00 0.00 36.21 5.25
2664 3397 0.390124 AGTTTGCCCACACAATGCAG 59.610 50.000 0.00 0.00 36.21 4.41
2665 3398 1.612950 CTAGTTTGCCCACACAATGCA 59.387 47.619 0.00 0.00 0.00 3.96
2666 3399 1.613437 ACTAGTTTGCCCACACAATGC 59.387 47.619 0.00 0.00 0.00 3.56
2667 3400 4.037923 AGAAACTAGTTTGCCCACACAATG 59.962 41.667 25.17 0.00 32.11 2.82
2668 3401 4.037923 CAGAAACTAGTTTGCCCACACAAT 59.962 41.667 25.17 0.00 32.11 2.71
2669 3402 3.380004 CAGAAACTAGTTTGCCCACACAA 59.620 43.478 25.17 0.00 32.11 3.33
2670 3403 2.948979 CAGAAACTAGTTTGCCCACACA 59.051 45.455 25.17 0.00 32.11 3.72
2671 3404 2.287608 GCAGAAACTAGTTTGCCCACAC 60.288 50.000 25.17 8.99 32.11 3.82
2672 3405 1.953686 GCAGAAACTAGTTTGCCCACA 59.046 47.619 25.17 0.00 32.11 4.17
2673 3406 2.226674 GAGCAGAAACTAGTTTGCCCAC 59.773 50.000 25.17 13.65 32.11 4.61
2674 3407 2.158682 TGAGCAGAAACTAGTTTGCCCA 60.159 45.455 25.17 17.50 32.11 5.36
2675 3408 2.226674 GTGAGCAGAAACTAGTTTGCCC 59.773 50.000 25.17 15.15 32.11 5.36
2676 3409 2.878406 TGTGAGCAGAAACTAGTTTGCC 59.122 45.455 25.17 16.51 32.11 4.52
2677 3410 3.312421 TGTGTGAGCAGAAACTAGTTTGC 59.688 43.478 25.17 22.30 32.11 3.68
2678 3411 5.088141 CTGTGTGAGCAGAAACTAGTTTG 57.912 43.478 25.17 13.73 38.70 2.93
2692 3425 0.036952 CTAGGTGGTGGCTGTGTGAG 60.037 60.000 0.00 0.00 0.00 3.51
2693 3426 0.762842 ACTAGGTGGTGGCTGTGTGA 60.763 55.000 0.00 0.00 0.00 3.58
2694 3427 0.108585 AACTAGGTGGTGGCTGTGTG 59.891 55.000 0.00 0.00 0.00 3.82
2695 3428 0.396811 GAACTAGGTGGTGGCTGTGT 59.603 55.000 0.00 0.00 0.00 3.72
2696 3429 0.396435 TGAACTAGGTGGTGGCTGTG 59.604 55.000 0.00 0.00 0.00 3.66
2697 3430 0.396811 GTGAACTAGGTGGTGGCTGT 59.603 55.000 0.00 0.00 0.00 4.40
2698 3431 0.670546 CGTGAACTAGGTGGTGGCTG 60.671 60.000 0.00 0.00 0.00 4.85
2699 3432 1.671742 CGTGAACTAGGTGGTGGCT 59.328 57.895 0.00 0.00 0.00 4.75
2700 3433 2.033194 GCGTGAACTAGGTGGTGGC 61.033 63.158 0.00 0.00 0.00 5.01
2701 3434 1.736645 CGCGTGAACTAGGTGGTGG 60.737 63.158 0.00 0.00 0.00 4.61
2702 3435 2.380410 GCGCGTGAACTAGGTGGTG 61.380 63.158 8.43 0.00 0.00 4.17
2703 3436 2.048503 GCGCGTGAACTAGGTGGT 60.049 61.111 8.43 0.00 0.00 4.16
2704 3437 3.179265 CGCGCGTGAACTAGGTGG 61.179 66.667 24.19 0.00 0.00 4.61
2705 3438 2.430244 ACGCGCGTGAACTAGGTG 60.430 61.111 37.37 0.93 0.00 4.00
2720 3453 2.058829 AAAAGCAGTTCGCCCACACG 62.059 55.000 0.00 0.00 44.04 4.49
2721 3454 0.594796 CAAAAGCAGTTCGCCCACAC 60.595 55.000 0.00 0.00 44.04 3.82
2722 3455 1.732917 CAAAAGCAGTTCGCCCACA 59.267 52.632 0.00 0.00 44.04 4.17
2723 3456 1.661509 GCAAAAGCAGTTCGCCCAC 60.662 57.895 0.00 0.00 44.04 4.61
2724 3457 2.727544 GCAAAAGCAGTTCGCCCA 59.272 55.556 0.00 0.00 44.04 5.36
2725 3458 2.049156 GGCAAAAGCAGTTCGCCC 60.049 61.111 0.00 0.00 44.04 6.13
2726 3459 2.049156 GGGCAAAAGCAGTTCGCC 60.049 61.111 0.00 0.00 44.04 5.54
2727 3460 1.661509 GTGGGCAAAAGCAGTTCGC 60.662 57.895 0.00 0.00 42.91 4.70
2728 3461 0.314935 ATGTGGGCAAAAGCAGTTCG 59.685 50.000 0.00 0.00 0.00 3.95
2729 3462 1.340889 TCATGTGGGCAAAAGCAGTTC 59.659 47.619 0.00 0.00 0.00 3.01
2730 3463 1.069049 GTCATGTGGGCAAAAGCAGTT 59.931 47.619 0.00 0.00 0.00 3.16
2731 3464 0.675633 GTCATGTGGGCAAAAGCAGT 59.324 50.000 0.00 0.00 0.00 4.40
2732 3465 0.675083 TGTCATGTGGGCAAAAGCAG 59.325 50.000 0.00 0.00 0.00 4.24
2733 3466 0.675083 CTGTCATGTGGGCAAAAGCA 59.325 50.000 0.00 0.00 0.00 3.91
2734 3467 0.675633 ACTGTCATGTGGGCAAAAGC 59.324 50.000 0.00 0.00 0.00 3.51
2735 3468 1.955778 TGACTGTCATGTGGGCAAAAG 59.044 47.619 6.36 0.00 0.00 2.27
2736 3469 2.064434 TGACTGTCATGTGGGCAAAA 57.936 45.000 6.36 0.00 0.00 2.44
2737 3470 2.291209 ATGACTGTCATGTGGGCAAA 57.709 45.000 21.71 0.00 35.43 3.68
2738 3471 3.281158 CATATGACTGTCATGTGGGCAA 58.719 45.455 29.18 12.93 40.77 4.52
2739 3472 2.239402 ACATATGACTGTCATGTGGGCA 59.761 45.455 35.14 17.96 46.21 5.36
2740 3473 2.923121 ACATATGACTGTCATGTGGGC 58.077 47.619 35.14 2.75 46.21 5.36
2741 3474 4.264253 ACAACATATGACTGTCATGTGGG 58.736 43.478 35.14 29.90 46.21 4.61
2742 3475 5.392272 CCAACAACATATGACTGTCATGTGG 60.392 44.000 35.14 25.63 46.21 4.17
2743 3476 5.412286 TCCAACAACATATGACTGTCATGTG 59.588 40.000 32.63 32.63 46.97 3.21
2744 3477 5.559770 TCCAACAACATATGACTGTCATGT 58.440 37.500 28.67 21.42 37.70 3.21
2745 3478 6.459161 CCATCCAACAACATATGACTGTCATG 60.459 42.308 28.67 19.01 37.70 3.07
2746 3479 5.591472 CCATCCAACAACATATGACTGTCAT 59.409 40.000 25.01 25.01 40.72 3.06
2747 3480 4.943093 CCATCCAACAACATATGACTGTCA 59.057 41.667 13.60 13.60 0.00 3.58
2748 3481 4.201950 GCCATCCAACAACATATGACTGTC 60.202 45.833 10.38 0.00 0.00 3.51
2749 3482 3.696051 GCCATCCAACAACATATGACTGT 59.304 43.478 10.38 9.37 0.00 3.55
2750 3483 3.695556 TGCCATCCAACAACATATGACTG 59.304 43.478 10.38 8.72 0.00 3.51
2751 3484 3.966979 TGCCATCCAACAACATATGACT 58.033 40.909 10.38 0.00 0.00 3.41
2752 3485 4.717233 TTGCCATCCAACAACATATGAC 57.283 40.909 10.38 0.00 0.00 3.06
2763 3496 3.130264 AACTGCAGTTGCCATCCAA 57.870 47.368 30.66 0.00 41.18 3.53
2764 3497 4.927557 AACTGCAGTTGCCATCCA 57.072 50.000 30.66 0.00 41.18 3.41
2772 3505 1.593196 ATGTACACGCAACTGCAGTT 58.407 45.000 26.36 26.36 42.21 3.16
2773 3506 2.337583 CTATGTACACGCAACTGCAGT 58.662 47.619 15.25 15.25 42.21 4.40
2774 3507 1.061131 GCTATGTACACGCAACTGCAG 59.939 52.381 13.48 13.48 42.21 4.41
2775 3508 1.075542 GCTATGTACACGCAACTGCA 58.924 50.000 12.65 0.00 42.21 4.41
2776 3509 1.075542 TGCTATGTACACGCAACTGC 58.924 50.000 16.70 6.44 37.78 4.40
2780 3513 4.749976 TCATAGTTGCTATGTACACGCAA 58.250 39.130 23.15 23.15 42.92 4.85
2781 3514 4.379339 TCATAGTTGCTATGTACACGCA 57.621 40.909 15.46 15.46 42.92 5.24
2782 3515 4.088638 CGATCATAGTTGCTATGTACACGC 59.911 45.833 13.72 11.06 42.92 5.34
2783 3516 4.088638 GCGATCATAGTTGCTATGTACACG 59.911 45.833 13.72 14.30 42.92 4.49
2784 3517 5.223382 AGCGATCATAGTTGCTATGTACAC 58.777 41.667 13.72 0.00 42.92 2.90
2785 3518 5.453567 AGCGATCATAGTTGCTATGTACA 57.546 39.130 13.72 0.00 42.92 2.90
2786 3519 6.743627 GTCTAGCGATCATAGTTGCTATGTAC 59.256 42.308 13.72 9.28 42.92 2.90
2787 3520 6.402226 CGTCTAGCGATCATAGTTGCTATGTA 60.402 42.308 13.72 4.28 42.35 2.29
2788 3521 5.617973 CGTCTAGCGATCATAGTTGCTATGT 60.618 44.000 13.72 4.31 42.35 2.29
2789 3522 4.790651 CGTCTAGCGATCATAGTTGCTATG 59.209 45.833 9.24 9.24 42.71 2.23
2790 3523 4.142578 CCGTCTAGCGATCATAGTTGCTAT 60.143 45.833 7.94 0.00 44.77 2.97
2791 3524 3.188667 CCGTCTAGCGATCATAGTTGCTA 59.811 47.826 7.94 0.00 44.77 3.49
2792 3525 2.030717 CCGTCTAGCGATCATAGTTGCT 60.031 50.000 7.94 0.00 44.77 3.91
2793 3526 2.320367 CCGTCTAGCGATCATAGTTGC 58.680 52.381 7.94 0.00 44.77 4.17
2794 3527 2.287608 TGCCGTCTAGCGATCATAGTTG 60.288 50.000 7.94 0.00 44.77 3.16
2795 3528 1.954382 TGCCGTCTAGCGATCATAGTT 59.046 47.619 7.94 0.00 44.77 2.24
2796 3529 1.605753 TGCCGTCTAGCGATCATAGT 58.394 50.000 7.94 0.00 44.77 2.12
2797 3530 2.706555 TTGCCGTCTAGCGATCATAG 57.293 50.000 7.94 0.00 44.77 2.23
2798 3531 3.660501 AATTGCCGTCTAGCGATCATA 57.339 42.857 7.94 0.00 44.77 2.15
2799 3532 2.533266 AATTGCCGTCTAGCGATCAT 57.467 45.000 7.94 0.00 44.77 2.45
2800 3533 2.100087 TGTAATTGCCGTCTAGCGATCA 59.900 45.455 7.94 3.69 44.77 2.92
2801 3534 2.726760 CTGTAATTGCCGTCTAGCGATC 59.273 50.000 7.94 0.00 44.77 3.69
2802 3535 2.100916 ACTGTAATTGCCGTCTAGCGAT 59.899 45.455 7.94 0.00 44.77 4.58
2803 3536 1.475280 ACTGTAATTGCCGTCTAGCGA 59.525 47.619 7.94 0.00 44.77 4.93
2804 3537 1.922570 ACTGTAATTGCCGTCTAGCG 58.077 50.000 0.00 0.33 40.95 4.26
2805 3538 3.658351 CAACTGTAATTGCCGTCTAGC 57.342 47.619 0.00 0.00 0.00 3.42
2814 3547 2.865556 TGTACGCGCAACTGTAATTG 57.134 45.000 5.73 0.00 0.00 2.32
2815 3548 2.095213 CCATGTACGCGCAACTGTAATT 59.905 45.455 5.73 0.00 0.00 1.40
2816 3549 1.663643 CCATGTACGCGCAACTGTAAT 59.336 47.619 5.73 0.00 0.00 1.89
2817 3550 1.072391 CCATGTACGCGCAACTGTAA 58.928 50.000 5.73 0.00 0.00 2.41
2818 3551 1.355796 GCCATGTACGCGCAACTGTA 61.356 55.000 5.73 0.00 0.00 2.74
2819 3552 2.677003 GCCATGTACGCGCAACTGT 61.677 57.895 5.73 0.00 0.00 3.55
2820 3553 2.098298 GCCATGTACGCGCAACTG 59.902 61.111 5.73 5.46 0.00 3.16
2821 3554 1.305219 ATTGCCATGTACGCGCAACT 61.305 50.000 5.73 0.00 44.63 3.16
2822 3555 0.861450 GATTGCCATGTACGCGCAAC 60.861 55.000 5.73 5.47 44.63 4.17
2823 3556 1.301677 TGATTGCCATGTACGCGCAA 61.302 50.000 5.73 14.13 45.77 4.85
2824 3557 1.704387 CTGATTGCCATGTACGCGCA 61.704 55.000 5.73 0.00 0.00 6.09
2825 3558 1.010797 CTGATTGCCATGTACGCGC 60.011 57.895 5.73 0.00 0.00 6.86
2826 3559 1.220529 ATCTGATTGCCATGTACGCG 58.779 50.000 3.53 3.53 0.00 6.01
2827 3560 4.035091 TGTTTATCTGATTGCCATGTACGC 59.965 41.667 0.00 0.00 0.00 4.42
2828 3561 5.733226 TGTTTATCTGATTGCCATGTACG 57.267 39.130 0.00 0.00 0.00 3.67
2829 3562 8.153479 TGTATGTTTATCTGATTGCCATGTAC 57.847 34.615 0.00 0.00 0.00 2.90
2830 3563 8.785946 CATGTATGTTTATCTGATTGCCATGTA 58.214 33.333 0.00 0.00 0.00 2.29
2831 3564 7.286087 ACATGTATGTTTATCTGATTGCCATGT 59.714 33.333 0.00 0.00 37.90 3.21
2832 3565 7.654568 ACATGTATGTTTATCTGATTGCCATG 58.345 34.615 0.00 0.00 37.90 3.66
2833 3566 7.503230 TGACATGTATGTTTATCTGATTGCCAT 59.497 33.333 0.00 0.00 41.95 4.40
2834 3567 6.827762 TGACATGTATGTTTATCTGATTGCCA 59.172 34.615 0.00 0.00 41.95 4.92
2835 3568 7.263100 TGACATGTATGTTTATCTGATTGCC 57.737 36.000 0.00 0.00 41.95 4.52
2836 3569 8.400947 AGTTGACATGTATGTTTATCTGATTGC 58.599 33.333 0.00 0.00 41.95 3.56
2837 3570 9.712359 CAGTTGACATGTATGTTTATCTGATTG 57.288 33.333 0.00 0.00 41.95 2.67
2838 3571 9.453572 ACAGTTGACATGTATGTTTATCTGATT 57.546 29.630 18.07 4.83 41.95 2.57
2839 3572 8.886719 CACAGTTGACATGTATGTTTATCTGAT 58.113 33.333 18.07 0.00 41.95 2.90
2840 3573 8.093927 TCACAGTTGACATGTATGTTTATCTGA 58.906 33.333 18.07 7.56 41.95 3.27
2841 3574 8.255394 TCACAGTTGACATGTATGTTTATCTG 57.745 34.615 0.00 8.58 41.95 2.90
2842 3575 9.453572 AATCACAGTTGACATGTATGTTTATCT 57.546 29.630 0.00 0.00 41.95 1.98
2846 3579 8.296713 GGTTAATCACAGTTGACATGTATGTTT 58.703 33.333 0.00 0.00 41.95 2.83
2847 3580 7.446931 TGGTTAATCACAGTTGACATGTATGTT 59.553 33.333 0.00 0.00 41.95 2.71
2848 3581 6.939730 TGGTTAATCACAGTTGACATGTATGT 59.060 34.615 0.00 0.00 45.16 2.29
2849 3582 7.119699 AGTGGTTAATCACAGTTGACATGTATG 59.880 37.037 20.65 0.00 39.93 2.39
2850 3583 7.168219 AGTGGTTAATCACAGTTGACATGTAT 58.832 34.615 20.65 0.00 39.93 2.29
2851 3584 6.530120 AGTGGTTAATCACAGTTGACATGTA 58.470 36.000 20.65 0.00 39.93 2.29
2852 3585 5.376625 AGTGGTTAATCACAGTTGACATGT 58.623 37.500 20.65 0.00 39.93 3.21
2853 3586 5.947228 AGTGGTTAATCACAGTTGACATG 57.053 39.130 20.65 0.00 39.93 3.21
2854 3587 6.650807 CACTAGTGGTTAATCACAGTTGACAT 59.349 38.462 20.65 0.18 39.93 3.06
2855 3588 5.989168 CACTAGTGGTTAATCACAGTTGACA 59.011 40.000 20.65 0.00 39.93 3.58
2856 3589 5.408604 CCACTAGTGGTTAATCACAGTTGAC 59.591 44.000 30.57 0.00 45.53 3.18
2857 3590 5.547465 CCACTAGTGGTTAATCACAGTTGA 58.453 41.667 30.57 0.26 45.53 3.18
2858 3591 5.862924 CCACTAGTGGTTAATCACAGTTG 57.137 43.478 30.57 12.75 45.53 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.