Multiple sequence alignment - TraesCS3A01G343300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G343300 chr3A 100.000 5347 0 0 1 5347 591575788 591581134 0.000000e+00 9875.0
1 TraesCS3A01G343300 chr3A 88.978 626 61 7 2699 3319 591578352 591578974 0.000000e+00 767.0
2 TraesCS3A01G343300 chr3A 88.978 626 61 8 2565 3187 591578486 591579106 0.000000e+00 767.0
3 TraesCS3A01G343300 chr3A 88.187 491 52 5 2832 3318 591578352 591578840 9.980000e-162 580.0
4 TraesCS3A01G343300 chr3A 88.187 491 52 5 2565 3053 591578619 591579105 9.980000e-162 580.0
5 TraesCS3A01G343300 chr3A 87.363 364 41 5 2966 3325 591578352 591578714 3.850000e-111 412.0
6 TraesCS3A01G343300 chr3A 87.363 364 41 5 2565 2927 591578753 591579112 3.850000e-111 412.0
7 TraesCS3A01G343300 chr3A 85.714 231 29 2 3098 3325 591578352 591578581 1.920000e-59 241.0
8 TraesCS3A01G343300 chr3A 89.000 100 9 2 3227 3325 591578349 591578447 7.270000e-24 122.0
9 TraesCS3A01G343300 chr3A 97.059 34 0 1 815 847 714115626 714115593 7.480000e-04 56.5
10 TraesCS3A01G343300 chr3B 91.116 2949 194 43 1 2901 590290315 590293243 0.000000e+00 3932.0
11 TraesCS3A01G343300 chr3B 93.326 1918 65 22 2918 4821 590293432 590295300 0.000000e+00 2774.0
12 TraesCS3A01G343300 chr3B 89.630 405 32 7 2651 3053 590293432 590293828 1.720000e-139 507.0
13 TraesCS3A01G343300 chr3B 88.670 406 35 10 2785 3187 590293432 590293829 8.050000e-133 484.0
14 TraesCS3A01G343300 chr3B 87.845 362 37 6 2565 2925 590293478 590293833 8.280000e-113 418.0
15 TraesCS3A01G343300 chr3B 97.059 34 0 1 815 847 14073677 14073644 7.480000e-04 56.5
16 TraesCS3A01G343300 chr3B 97.059 34 0 1 815 847 827217821 827217854 7.480000e-04 56.5
17 TraesCS3A01G343300 chr3D 89.560 2998 170 58 1 2945 449112215 449115122 0.000000e+00 3670.0
18 TraesCS3A01G343300 chr3D 91.900 1642 78 20 3387 4982 449115539 449117171 0.000000e+00 2244.0
19 TraesCS3A01G343300 chr3D 92.486 346 26 0 5002 5347 449122754 449123099 3.720000e-136 496.0
20 TraesCS3A01G343300 chr3D 89.501 381 37 3 2699 3077 449114743 449115122 3.750000e-131 479.0
21 TraesCS3A01G343300 chr3D 87.696 382 43 4 2832 3211 449114743 449115122 4.910000e-120 442.0
22 TraesCS3A01G343300 chr3D 87.603 363 41 3 2966 3325 449114743 449115104 8.280000e-113 418.0
23 TraesCS3A01G343300 chr3D 90.370 270 15 7 3105 3367 449115282 449115547 1.430000e-90 344.0
24 TraesCS3A01G343300 chr3D 91.129 248 20 2 2565 2811 449114876 449115122 8.580000e-88 335.0
25 TraesCS3A01G343300 chr3D 93.488 215 14 0 2973 3187 449115282 449115496 2.400000e-83 320.0
26 TraesCS3A01G343300 chr3D 89.862 217 20 2 2578 2794 449115288 449115502 1.470000e-70 278.0
27 TraesCS3A01G343300 chr3D 85.652 230 28 3 3098 3324 449114743 449114970 2.490000e-58 237.0
28 TraesCS3A01G343300 chr7D 97.059 34 0 1 815 847 454843134 454843101 7.480000e-04 56.5
29 TraesCS3A01G343300 chr5B 94.595 37 0 1 813 847 411754023 411753987 7.480000e-04 56.5
30 TraesCS3A01G343300 chr1A 96.970 33 1 0 815 847 553629142 553629110 7.480000e-04 56.5
31 TraesCS3A01G343300 chr4A 100.000 28 0 0 815 842 628208056 628208029 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G343300 chr3A 591575788 591581134 5346 False 1528.444444 9875 89.307778 1 5347 9 chr3A.!!$F1 5346
1 TraesCS3A01G343300 chr3B 590290315 590295300 4985 False 1623.000000 3932 90.117400 1 4821 5 chr3B.!!$F2 4820
2 TraesCS3A01G343300 chr3D 449112215 449117171 4956 False 876.700000 3670 89.676100 1 4982 10 chr3D.!!$F2 4981

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.884704 GTGCCGGCTCAAGAACTTCA 60.885 55.000 29.70 0.0 0.00 3.02 F
1079 1136 1.142060 TCTCACCACCCACGAACAAAT 59.858 47.619 0.00 0.0 0.00 2.32 F
1455 1512 0.034380 AGGACGACGAGGGAGATGAA 60.034 55.000 0.00 0.0 0.00 2.57 F
1473 1530 0.618968 AAGAGGAGGAGGCGGTTGAT 60.619 55.000 0.00 0.0 0.00 2.57 F
1515 1587 0.750546 TCGACGACGATGGGGAAGAT 60.751 55.000 5.75 0.0 43.81 2.40 F
2617 2745 0.610174 TGTGCCTAGAGCTTGTCCTG 59.390 55.000 0.00 0.0 44.23 3.86 F
3136 3568 1.065564 GGCTGTTTCTGAGGATGAGCT 60.066 52.381 0.00 0.0 0.00 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1455 1512 1.002274 ATCAACCGCCTCCTCCTCT 59.998 57.895 0.00 0.0 0.00 3.69 R
2270 2348 1.477558 CCCCATCTCTATTGTGTGGCC 60.478 57.143 0.00 0.0 0.00 5.36 R
2383 2479 1.707427 AGGTGGCTTTGGATCTGAGTT 59.293 47.619 0.00 0.0 0.00 3.01 R
2550 2678 2.040145 TCATCTCCAAGCACACATGGAA 59.960 45.455 0.00 0.0 42.85 3.53 R
2978 3410 2.050144 ACCTCAGAAACAGCCTCTGAA 58.950 47.619 4.27 0.0 46.58 3.02 R
3794 4237 0.978146 TTCCTAGCTCCTCCTGCCAC 60.978 60.000 0.00 0.0 0.00 5.01 R
5054 5539 0.110486 TTTGAGTGGCTTCCCCTCAC 59.890 55.000 0.00 0.0 37.82 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.884704 GTGCCGGCTCAAGAACTTCA 60.885 55.000 29.70 0.00 0.00 3.02
73 74 4.394729 GGAAGGAGACTAGATCGAGACAT 58.605 47.826 10.07 0.00 42.68 3.06
90 91 3.070018 GACATCCCATGCTAATCCTTCG 58.930 50.000 0.00 0.00 0.00 3.79
96 97 2.292267 CATGCTAATCCTTCGCAACCT 58.708 47.619 0.00 0.00 37.20 3.50
110 111 1.278127 GCAACCTAGACCACTAAGGCA 59.722 52.381 0.00 0.00 43.14 4.75
114 115 5.741011 CAACCTAGACCACTAAGGCAATAA 58.259 41.667 0.00 0.00 43.14 1.40
115 116 6.177610 CAACCTAGACCACTAAGGCAATAAA 58.822 40.000 0.00 0.00 43.14 1.40
179 180 3.211000 AGAGAAGGATCCAGATAAGGGGT 59.789 47.826 15.82 0.00 0.00 4.95
191 193 5.437946 CAGATAAGGGGTAAAGAAAGGTCC 58.562 45.833 0.00 0.00 0.00 4.46
330 333 1.579932 GAGTGACCGAGCGACAGAA 59.420 57.895 0.00 0.00 0.00 3.02
339 342 2.416836 CCGAGCGACAGAATAGGTCAAA 60.417 50.000 0.00 0.00 34.97 2.69
361 364 3.198068 CCATTAGCTAGCACAACGACAT 58.802 45.455 18.83 0.00 0.00 3.06
416 427 6.433847 TTCTAGAAGGTTCTTGAACATGGA 57.566 37.500 14.38 3.51 41.66 3.41
426 437 8.306761 AGGTTCTTGAACATGGATTTTAATGTC 58.693 33.333 14.38 0.00 35.99 3.06
433 444 9.083422 TGAACATGGATTTTAATGTCAGGTTTA 57.917 29.630 0.00 0.00 35.99 2.01
602 631 8.341903 CAATCTTTTGTTCCAAATTTTACCCAC 58.658 33.333 0.00 0.00 0.00 4.61
757 810 6.808829 TCTTCAATTGCTGTTCACAATTTCT 58.191 32.000 0.00 0.00 43.42 2.52
758 811 7.267128 TCTTCAATTGCTGTTCACAATTTCTT 58.733 30.769 0.00 0.00 43.42 2.52
760 813 7.928908 TCAATTGCTGTTCACAATTTCTTAC 57.071 32.000 0.00 0.00 43.42 2.34
767 820 9.677567 TGCTGTTCACAATTTCTTACTTTATTC 57.322 29.630 0.00 0.00 0.00 1.75
770 823 7.806014 TGTTCACAATTTCTTACTTTATTCGCC 59.194 33.333 0.00 0.00 0.00 5.54
790 843 8.438676 TTCGCCTTTTGGAATTTCAATTTTTA 57.561 26.923 0.00 0.00 44.07 1.52
876 931 1.826054 CCGTTTGGTGGGACTTGCA 60.826 57.895 0.00 0.00 0.00 4.08
916 971 3.143728 AGTGGGCTAACTTTTGGTTACG 58.856 45.455 0.00 0.00 39.17 3.18
962 1019 1.294459 GGGCCTAAAGAACGACGGT 59.706 57.895 0.84 0.00 0.00 4.83
1016 1073 2.344025 GTTAGTCGCGTCCAAATCCTT 58.656 47.619 5.77 0.00 0.00 3.36
1079 1136 1.142060 TCTCACCACCCACGAACAAAT 59.858 47.619 0.00 0.00 0.00 2.32
1154 1211 1.450312 CCCAACGACCAGGATCTGC 60.450 63.158 0.00 0.00 0.00 4.26
1425 1482 1.561542 GAAGAGGTGGTGGATGTGGAT 59.438 52.381 0.00 0.00 0.00 3.41
1455 1512 0.034380 AGGACGACGAGGGAGATGAA 60.034 55.000 0.00 0.00 0.00 2.57
1473 1530 0.618968 AAGAGGAGGAGGCGGTTGAT 60.619 55.000 0.00 0.00 0.00 2.57
1515 1587 0.750546 TCGACGACGATGGGGAAGAT 60.751 55.000 5.75 0.00 43.81 2.40
1521 1593 1.341531 GACGATGGGGAAGATGACGAT 59.658 52.381 0.00 0.00 0.00 3.73
1545 1617 2.689034 GGGGTGGAGGGTGAGGAG 60.689 72.222 0.00 0.00 0.00 3.69
1617 1689 3.069318 GGCGACGAAGAGGAGGGT 61.069 66.667 0.00 0.00 0.00 4.34
1629 1701 1.218316 GGAGGGTGGTGACGATGAC 59.782 63.158 0.00 0.00 0.00 3.06
1665 1737 1.002251 GACGATGATGACGAGGAGGAC 60.002 57.143 0.00 0.00 34.70 3.85
1689 1761 1.020333 ACGAAGTCGACGAGGAGGAG 61.020 60.000 10.46 0.03 29.74 3.69
1715 1787 6.226787 AGCCTGAGGTATAAATTTCTCATCG 58.773 40.000 0.00 3.80 35.95 3.84
1732 1805 6.898041 TCTCATCGTCTTGTAATTTTGTTGG 58.102 36.000 0.00 0.00 0.00 3.77
1738 1811 6.428465 TCGTCTTGTAATTTTGTTGGCATCTA 59.572 34.615 0.00 0.00 0.00 1.98
1778 1851 6.017109 TCAGTACTTTCGGTTACGTTTACTCT 60.017 38.462 0.00 0.00 41.85 3.24
1800 1874 9.627395 ACTCTATGAACATATACTTCGTTATGC 57.373 33.333 0.00 0.00 30.50 3.14
1885 1959 4.642445 TTCTCGTGGCTGTCGATTAATA 57.358 40.909 0.00 0.00 36.73 0.98
1887 1961 5.196341 TCTCGTGGCTGTCGATTAATATT 57.804 39.130 0.00 0.00 36.73 1.28
1980 2056 1.321474 TCTTTTGCTCAACCTGCAGG 58.679 50.000 31.60 31.60 41.71 4.85
2270 2348 6.656632 TCCATCTGAGCTGTTAACCTATAG 57.343 41.667 2.48 0.00 0.00 1.31
2359 2437 2.280628 CGGTCTTCCAAGGTATCTTGC 58.719 52.381 10.44 0.00 46.69 4.01
2447 2543 7.205992 GTGCAGATCTGTCAGATTTGATAGTA 58.794 38.462 28.75 11.71 38.65 1.82
2459 2555 7.565398 TCAGATTTGATAGTAGGCCTAGTTCTT 59.435 37.037 25.12 10.81 0.00 2.52
2485 2581 5.344743 TCTCACTCAGATCCAAATACACC 57.655 43.478 0.00 0.00 0.00 4.16
2495 2591 8.197439 TCAGATCCAAATACACCTATATATGCG 58.803 37.037 0.00 0.00 0.00 4.73
2498 2594 9.547753 GATCCAAATACACCTATATATGCGAAT 57.452 33.333 0.00 0.00 0.00 3.34
2525 2653 4.543590 AGTGTAGGTCTGTCAGATTTGG 57.456 45.455 5.68 0.00 0.00 3.28
2542 2670 5.489278 AGATTTGGTAGTAGGCCTTCTTTCT 59.511 40.000 17.92 8.06 0.00 2.52
2543 2671 4.553330 TTGGTAGTAGGCCTTCTTTCTG 57.447 45.455 17.92 0.00 0.00 3.02
2550 2678 1.968540 GCCTTCTTTCTGGCGCTGT 60.969 57.895 7.64 0.00 39.71 4.40
2561 2689 2.126734 GCGCTGTTCCATGTGTGC 60.127 61.111 0.00 0.00 0.00 4.57
2617 2745 0.610174 TGTGCCTAGAGCTTGTCCTG 59.390 55.000 0.00 0.00 44.23 3.86
2684 2812 7.785033 AGTCAAACACTTCCATTTTCATTTCT 58.215 30.769 0.00 0.00 26.56 2.52
2796 2924 5.295950 CCTATCTGATCCAAAGCACTAGTG 58.704 45.833 18.93 18.93 0.00 2.74
2843 2971 2.996249 TGGCTGAGGAGATGATGAAC 57.004 50.000 0.00 0.00 0.00 3.18
2978 3410 6.555463 ATTTTGCCAAGGAGATGATGAATT 57.445 33.333 0.00 0.00 0.00 2.17
3053 3485 5.128919 ACTGATTTGCCTATCTGATCCAAC 58.871 41.667 0.00 0.00 0.00 3.77
3136 3568 1.065564 GGCTGTTTCTGAGGATGAGCT 60.066 52.381 0.00 0.00 0.00 4.09
3137 3569 2.278854 GCTGTTTCTGAGGATGAGCTC 58.721 52.381 6.82 6.82 0.00 4.09
3138 3570 2.354503 GCTGTTTCTGAGGATGAGCTCA 60.355 50.000 20.79 20.79 0.00 4.26
3156 3588 3.798548 GCTCAGAGCTCTACCTATGTTGC 60.799 52.174 17.75 9.17 38.45 4.17
3161 3593 5.064452 CAGAGCTCTACCTATGTTGCAAAAG 59.936 44.000 17.75 0.00 0.00 2.27
3191 3623 6.959639 TTTGCCTATCTGATCCAAATTACC 57.040 37.500 0.00 0.00 0.00 2.85
3194 3626 6.613699 TGCCTATCTGATCCAAATTACCATT 58.386 36.000 0.00 0.00 0.00 3.16
3294 3726 3.322828 AGCTCTCCATGTGTTGCAAAATT 59.677 39.130 0.00 0.00 0.00 1.82
3510 3949 4.540099 TCAGTCTGATCCCCTATGGTTTTT 59.460 41.667 0.00 0.00 34.77 1.94
3643 4082 7.790823 TCCCAAACTGTAGTTAAACTGTTAC 57.209 36.000 0.00 0.00 39.65 2.50
3714 4156 6.229733 CAAATAATTGGTTTGCCCTTCTCAA 58.770 36.000 5.54 0.00 32.69 3.02
3758 4200 4.193826 AGTCAACTAGCATCGTTGTGAT 57.806 40.909 11.01 0.00 41.76 3.06
3774 4217 7.351981 TCGTTGTGATCAGTCAAACTAATTTG 58.648 34.615 0.00 0.00 45.67 2.32
3793 4236 1.111277 GGACCCTTGCACTGTTGTTT 58.889 50.000 0.00 0.00 0.00 2.83
3794 4237 1.202405 GGACCCTTGCACTGTTGTTTG 60.202 52.381 0.00 0.00 0.00 2.93
3965 4408 0.392193 CTGTCAAGGCGCAATCCTCT 60.392 55.000 10.83 0.00 34.82 3.69
3986 4429 0.174617 CGAAGAGGAAGAGGTCTGGC 59.825 60.000 0.00 0.00 0.00 4.85
3988 4431 1.893919 AAGAGGAAGAGGTCTGGCGC 61.894 60.000 0.00 0.00 0.00 6.53
4386 4829 7.584987 ACTAGCTTGCTGTTATTTTACTGTTG 58.415 34.615 5.26 0.00 0.00 3.33
4389 4832 6.263168 AGCTTGCTGTTATTTTACTGTTGTCT 59.737 34.615 0.00 0.00 0.00 3.41
4395 4838 7.421530 TGTTATTTTACTGTTGTCTCTGCTC 57.578 36.000 0.00 0.00 0.00 4.26
4452 4896 2.091122 GCGCTTAGAAAACATTTGCTGC 59.909 45.455 0.00 0.00 0.00 5.25
4550 5018 1.002366 CGCTTAGTGTCATGGCTGTC 58.998 55.000 0.00 0.00 0.00 3.51
4571 5039 2.752144 GCTCTGGCTTCATGATTTCG 57.248 50.000 0.00 0.00 35.22 3.46
4572 5040 2.012673 GCTCTGGCTTCATGATTTCGT 58.987 47.619 0.00 0.00 35.22 3.85
4653 5132 7.095857 CGTTCTGCTCTTGTATATTGGAGATTC 60.096 40.741 0.00 0.00 0.00 2.52
4790 5271 4.338879 CACTGGAGGAATCCACAGAAATT 58.661 43.478 24.27 5.37 35.40 1.82
4840 5324 3.666902 CGTCCTTTGTTTCAATCGCGATT 60.667 43.478 27.94 27.94 0.00 3.34
4847 5331 1.802069 TTCAATCGCGATTGTCACCA 58.198 45.000 43.67 30.10 46.15 4.17
4922 5406 7.172875 CGAGCATCAATCTCAAATCTAGGATTT 59.827 37.037 0.31 0.31 33.17 2.17
4935 5419 8.313292 CAAATCTAGGATTTGAATTTTGGTGGA 58.687 33.333 21.39 0.00 40.42 4.02
4936 5420 6.834168 TCTAGGATTTGAATTTTGGTGGAC 57.166 37.500 0.00 0.00 0.00 4.02
4938 5422 5.473066 AGGATTTGAATTTTGGTGGACTG 57.527 39.130 0.00 0.00 0.00 3.51
4939 5423 5.147032 AGGATTTGAATTTTGGTGGACTGA 58.853 37.500 0.00 0.00 0.00 3.41
4948 5432 8.087750 TGAATTTTGGTGGACTGAAAATATCAC 58.912 33.333 0.00 0.00 33.47 3.06
4949 5433 7.781324 ATTTTGGTGGACTGAAAATATCACT 57.219 32.000 0.00 0.00 33.47 3.41
4950 5434 6.573664 TTTGGTGGACTGAAAATATCACTG 57.426 37.500 0.00 0.00 33.47 3.66
4951 5435 4.009675 TGGTGGACTGAAAATATCACTGC 58.990 43.478 0.00 0.00 33.47 4.40
4956 5441 4.384647 GGACTGAAAATATCACTGCCCTCT 60.385 45.833 0.00 0.00 33.47 3.69
4957 5442 5.184892 ACTGAAAATATCACTGCCCTCTT 57.815 39.130 0.00 0.00 33.47 2.85
4960 5445 6.599638 ACTGAAAATATCACTGCCCTCTTAAC 59.400 38.462 0.00 0.00 33.47 2.01
4961 5446 6.721318 TGAAAATATCACTGCCCTCTTAACT 58.279 36.000 0.00 0.00 31.50 2.24
4976 5461 8.903820 GCCCTCTTAACTATTTAATCACATGTT 58.096 33.333 0.00 0.00 0.00 2.71
4989 5474 5.598416 ATCACATGTTGATTCGTAGGAGA 57.402 39.130 0.00 0.00 42.87 3.71
4990 5475 5.598416 TCACATGTTGATTCGTAGGAGAT 57.402 39.130 0.00 0.00 0.00 2.75
4991 5476 6.709018 TCACATGTTGATTCGTAGGAGATA 57.291 37.500 0.00 0.00 0.00 1.98
4992 5477 7.290110 TCACATGTTGATTCGTAGGAGATAT 57.710 36.000 0.00 0.00 0.00 1.63
4993 5478 8.404107 TCACATGTTGATTCGTAGGAGATATA 57.596 34.615 0.00 0.00 0.00 0.86
4994 5479 8.515414 TCACATGTTGATTCGTAGGAGATATAG 58.485 37.037 0.00 0.00 0.00 1.31
4995 5480 8.515414 CACATGTTGATTCGTAGGAGATATAGA 58.485 37.037 0.00 0.00 0.00 1.98
4996 5481 9.249053 ACATGTTGATTCGTAGGAGATATAGAT 57.751 33.333 0.00 0.00 0.00 1.98
5049 5534 9.581099 AAAACTTACAACTAGAAAATTGTGTGG 57.419 29.630 0.00 0.00 39.36 4.17
5050 5535 8.514330 AACTTACAACTAGAAAATTGTGTGGA 57.486 30.769 0.00 0.00 39.36 4.02
5051 5536 8.514330 ACTTACAACTAGAAAATTGTGTGGAA 57.486 30.769 0.00 0.00 39.36 3.53
5052 5537 9.131791 ACTTACAACTAGAAAATTGTGTGGAAT 57.868 29.630 0.00 0.00 39.36 3.01
5053 5538 9.398170 CTTACAACTAGAAAATTGTGTGGAATG 57.602 33.333 0.00 0.00 39.36 2.67
5054 5539 6.748132 ACAACTAGAAAATTGTGTGGAATGG 58.252 36.000 0.00 0.00 37.64 3.16
5055 5540 6.323739 ACAACTAGAAAATTGTGTGGAATGGT 59.676 34.615 0.00 0.00 37.64 3.55
5056 5541 6.331369 ACTAGAAAATTGTGTGGAATGGTG 57.669 37.500 0.00 0.00 0.00 4.17
5057 5542 6.068010 ACTAGAAAATTGTGTGGAATGGTGA 58.932 36.000 0.00 0.00 0.00 4.02
5058 5543 5.458041 AGAAAATTGTGTGGAATGGTGAG 57.542 39.130 0.00 0.00 0.00 3.51
5059 5544 4.281688 AGAAAATTGTGTGGAATGGTGAGG 59.718 41.667 0.00 0.00 0.00 3.86
5060 5545 2.220653 ATTGTGTGGAATGGTGAGGG 57.779 50.000 0.00 0.00 0.00 4.30
5061 5546 0.112218 TTGTGTGGAATGGTGAGGGG 59.888 55.000 0.00 0.00 0.00 4.79
5062 5547 0.770166 TGTGTGGAATGGTGAGGGGA 60.770 55.000 0.00 0.00 0.00 4.81
5063 5548 0.404040 GTGTGGAATGGTGAGGGGAA 59.596 55.000 0.00 0.00 0.00 3.97
5064 5549 0.698238 TGTGGAATGGTGAGGGGAAG 59.302 55.000 0.00 0.00 0.00 3.46
5065 5550 0.681243 GTGGAATGGTGAGGGGAAGC 60.681 60.000 0.00 0.00 0.00 3.86
5066 5551 1.076705 GGAATGGTGAGGGGAAGCC 60.077 63.158 0.00 0.00 0.00 4.35
5067 5552 1.691219 GAATGGTGAGGGGAAGCCA 59.309 57.895 0.00 0.00 35.28 4.75
5068 5553 0.681243 GAATGGTGAGGGGAAGCCAC 60.681 60.000 0.00 0.00 33.42 5.01
5069 5554 1.142688 AATGGTGAGGGGAAGCCACT 61.143 55.000 0.00 0.00 41.79 4.00
5075 5560 1.770324 AGGGGAAGCCACTCAAAGG 59.230 57.895 0.00 0.00 25.48 3.11
5076 5561 0.772124 AGGGGAAGCCACTCAAAGGA 60.772 55.000 0.00 0.00 25.48 3.36
5077 5562 0.112412 GGGGAAGCCACTCAAAGGAA 59.888 55.000 0.00 0.00 0.00 3.36
5078 5563 1.480498 GGGGAAGCCACTCAAAGGAAA 60.480 52.381 0.00 0.00 0.00 3.13
5079 5564 2.529632 GGGAAGCCACTCAAAGGAAAT 58.470 47.619 0.00 0.00 0.00 2.17
5080 5565 2.899900 GGGAAGCCACTCAAAGGAAATT 59.100 45.455 0.00 0.00 0.00 1.82
5081 5566 3.324846 GGGAAGCCACTCAAAGGAAATTT 59.675 43.478 0.00 0.00 0.00 1.82
5082 5567 4.560128 GGAAGCCACTCAAAGGAAATTTC 58.440 43.478 9.83 9.83 0.00 2.17
5083 5568 4.039124 GGAAGCCACTCAAAGGAAATTTCA 59.961 41.667 19.49 0.00 0.00 2.69
5084 5569 5.453198 GGAAGCCACTCAAAGGAAATTTCAA 60.453 40.000 19.49 0.00 0.00 2.69
5085 5570 5.612725 AGCCACTCAAAGGAAATTTCAAA 57.387 34.783 19.49 0.00 0.00 2.69
5086 5571 5.359756 AGCCACTCAAAGGAAATTTCAAAC 58.640 37.500 19.49 2.86 0.00 2.93
5087 5572 4.209080 GCCACTCAAAGGAAATTTCAAACG 59.791 41.667 19.49 5.68 0.00 3.60
5088 5573 4.744631 CCACTCAAAGGAAATTTCAAACGG 59.255 41.667 19.49 7.44 0.00 4.44
5089 5574 4.209080 CACTCAAAGGAAATTTCAAACGGC 59.791 41.667 19.49 1.43 0.00 5.68
5090 5575 3.723260 TCAAAGGAAATTTCAAACGGCC 58.277 40.909 19.49 0.00 0.00 6.13
5091 5576 3.386402 TCAAAGGAAATTTCAAACGGCCT 59.614 39.130 19.49 3.64 0.00 5.19
5092 5577 4.585162 TCAAAGGAAATTTCAAACGGCCTA 59.415 37.500 19.49 0.00 0.00 3.93
5093 5578 5.245075 TCAAAGGAAATTTCAAACGGCCTAT 59.755 36.000 19.49 0.00 0.00 2.57
5094 5579 4.983671 AGGAAATTTCAAACGGCCTATC 57.016 40.909 19.49 0.00 0.00 2.08
5095 5580 3.377172 AGGAAATTTCAAACGGCCTATCG 59.623 43.478 19.49 0.00 0.00 2.92
5096 5581 3.128068 GGAAATTTCAAACGGCCTATCGT 59.872 43.478 19.49 0.00 46.08 3.73
5097 5582 4.333372 GGAAATTTCAAACGGCCTATCGTA 59.667 41.667 19.49 0.00 43.07 3.43
5098 5583 5.163733 GGAAATTTCAAACGGCCTATCGTAA 60.164 40.000 19.49 0.00 43.07 3.18
5099 5584 5.479716 AATTTCAAACGGCCTATCGTAAG 57.520 39.130 0.00 0.00 43.07 2.34
5100 5585 2.589798 TCAAACGGCCTATCGTAAGG 57.410 50.000 0.00 1.95 43.07 2.69
5101 5586 2.101783 TCAAACGGCCTATCGTAAGGA 58.898 47.619 0.00 0.00 43.07 3.36
5102 5587 2.159198 TCAAACGGCCTATCGTAAGGAC 60.159 50.000 0.00 5.87 43.07 3.85
5103 5588 0.749049 AACGGCCTATCGTAAGGACC 59.251 55.000 0.00 8.80 42.30 4.46
5104 5589 1.111715 ACGGCCTATCGTAAGGACCC 61.112 60.000 0.00 2.26 42.30 4.46
5105 5590 1.111116 CGGCCTATCGTAAGGACCCA 61.111 60.000 0.00 0.00 42.30 4.51
5106 5591 1.125633 GGCCTATCGTAAGGACCCAA 58.874 55.000 9.57 0.00 38.95 4.12
5107 5592 1.487558 GGCCTATCGTAAGGACCCAAA 59.512 52.381 9.57 0.00 38.95 3.28
5108 5593 2.558378 GCCTATCGTAAGGACCCAAAC 58.442 52.381 9.57 0.00 39.15 2.93
5109 5594 2.093341 GCCTATCGTAAGGACCCAAACA 60.093 50.000 9.57 0.00 39.15 2.83
5110 5595 3.433173 GCCTATCGTAAGGACCCAAACAT 60.433 47.826 9.57 0.00 39.15 2.71
5111 5596 4.127171 CCTATCGTAAGGACCCAAACATG 58.873 47.826 0.00 0.00 39.15 3.21
5112 5597 3.992943 ATCGTAAGGACCCAAACATGA 57.007 42.857 0.00 0.00 38.47 3.07
5113 5598 3.773418 TCGTAAGGACCCAAACATGAA 57.227 42.857 0.00 0.00 38.47 2.57
5114 5599 3.404899 TCGTAAGGACCCAAACATGAAC 58.595 45.455 0.00 0.00 38.47 3.18
5115 5600 3.142951 CGTAAGGACCCAAACATGAACA 58.857 45.455 0.00 0.00 0.00 3.18
5116 5601 3.756434 CGTAAGGACCCAAACATGAACAT 59.244 43.478 0.00 0.00 0.00 2.71
5117 5602 4.379394 CGTAAGGACCCAAACATGAACATG 60.379 45.833 12.43 12.43 44.15 3.21
5118 5603 3.524095 AGGACCCAAACATGAACATGA 57.476 42.857 19.56 0.00 41.20 3.07
5119 5604 3.843422 AGGACCCAAACATGAACATGAA 58.157 40.909 19.56 0.00 41.20 2.57
5120 5605 4.222336 AGGACCCAAACATGAACATGAAA 58.778 39.130 19.56 0.00 41.20 2.69
5121 5606 4.840115 AGGACCCAAACATGAACATGAAAT 59.160 37.500 19.56 4.70 41.20 2.17
5122 5607 5.307716 AGGACCCAAACATGAACATGAAATT 59.692 36.000 19.56 9.59 41.20 1.82
5123 5608 5.409214 GGACCCAAACATGAACATGAAATTG 59.591 40.000 19.56 17.89 41.20 2.32
5124 5609 6.172136 ACCCAAACATGAACATGAAATTGA 57.828 33.333 19.56 0.00 41.20 2.57
5125 5610 6.590068 ACCCAAACATGAACATGAAATTGAA 58.410 32.000 19.56 0.00 41.20 2.69
5126 5611 6.707161 ACCCAAACATGAACATGAAATTGAAG 59.293 34.615 19.56 15.49 41.20 3.02
5127 5612 6.930164 CCCAAACATGAACATGAAATTGAAGA 59.070 34.615 19.56 0.00 41.20 2.87
5128 5613 7.441760 CCCAAACATGAACATGAAATTGAAGAA 59.558 33.333 19.56 0.00 41.20 2.52
5129 5614 8.995220 CCAAACATGAACATGAAATTGAAGAAT 58.005 29.630 19.56 0.00 41.20 2.40
5139 5624 9.846248 ACATGAAATTGAAGAATTACAGTAAGC 57.154 29.630 0.00 0.00 31.18 3.09
5140 5625 9.003112 CATGAAATTGAAGAATTACAGTAAGCG 57.997 33.333 0.00 0.00 31.18 4.68
5141 5626 8.317891 TGAAATTGAAGAATTACAGTAAGCGA 57.682 30.769 0.00 0.00 31.18 4.93
5142 5627 8.779303 TGAAATTGAAGAATTACAGTAAGCGAA 58.221 29.630 0.00 0.00 31.18 4.70
5143 5628 9.607285 GAAATTGAAGAATTACAGTAAGCGAAA 57.393 29.630 0.00 0.00 31.18 3.46
5144 5629 8.950403 AATTGAAGAATTACAGTAAGCGAAAC 57.050 30.769 0.00 0.00 29.49 2.78
5145 5630 7.724305 TTGAAGAATTACAGTAAGCGAAACT 57.276 32.000 0.00 0.00 0.00 2.66
5146 5631 8.821147 TTGAAGAATTACAGTAAGCGAAACTA 57.179 30.769 0.00 0.00 0.00 2.24
5147 5632 8.462143 TGAAGAATTACAGTAAGCGAAACTAG 57.538 34.615 0.00 0.00 0.00 2.57
5148 5633 8.086522 TGAAGAATTACAGTAAGCGAAACTAGT 58.913 33.333 0.00 0.00 0.00 2.57
5149 5634 9.565213 GAAGAATTACAGTAAGCGAAACTAGTA 57.435 33.333 0.00 0.00 0.00 1.82
5150 5635 9.918630 AAGAATTACAGTAAGCGAAACTAGTAA 57.081 29.630 0.00 0.00 31.43 2.24
5151 5636 9.351570 AGAATTACAGTAAGCGAAACTAGTAAC 57.648 33.333 0.00 0.00 30.55 2.50
5152 5637 8.471361 AATTACAGTAAGCGAAACTAGTAACC 57.529 34.615 0.00 0.00 30.55 2.85
5153 5638 4.479619 ACAGTAAGCGAAACTAGTAACCG 58.520 43.478 0.00 1.31 0.00 4.44
5154 5639 4.216257 ACAGTAAGCGAAACTAGTAACCGA 59.784 41.667 13.41 0.00 0.00 4.69
5155 5640 5.105997 ACAGTAAGCGAAACTAGTAACCGAT 60.106 40.000 13.41 6.15 0.00 4.18
5156 5641 5.454877 CAGTAAGCGAAACTAGTAACCGATC 59.545 44.000 13.41 0.00 0.00 3.69
5157 5642 3.062323 AGCGAAACTAGTAACCGATCG 57.938 47.619 8.51 8.51 0.00 3.69
5158 5643 2.421424 AGCGAAACTAGTAACCGATCGT 59.579 45.455 15.09 0.00 0.00 3.73
5159 5644 2.529090 GCGAAACTAGTAACCGATCGTG 59.471 50.000 15.09 8.18 0.00 4.35
5160 5645 3.103738 CGAAACTAGTAACCGATCGTGG 58.896 50.000 15.09 1.70 0.00 4.94
5161 5646 3.442100 GAAACTAGTAACCGATCGTGGG 58.558 50.000 15.09 0.90 0.00 4.61
5162 5647 2.425143 ACTAGTAACCGATCGTGGGA 57.575 50.000 15.09 0.00 0.00 4.37
5163 5648 2.295885 ACTAGTAACCGATCGTGGGAG 58.704 52.381 15.09 5.97 0.00 4.30
5164 5649 2.295885 CTAGTAACCGATCGTGGGAGT 58.704 52.381 15.09 0.80 0.00 3.85
5165 5650 0.815734 AGTAACCGATCGTGGGAGTG 59.184 55.000 15.09 0.00 0.00 3.51
5166 5651 0.179119 GTAACCGATCGTGGGAGTGG 60.179 60.000 15.09 0.00 0.00 4.00
5167 5652 0.323633 TAACCGATCGTGGGAGTGGA 60.324 55.000 15.09 0.00 0.00 4.02
5168 5653 1.189524 AACCGATCGTGGGAGTGGAA 61.190 55.000 15.09 0.00 0.00 3.53
5169 5654 0.976073 ACCGATCGTGGGAGTGGAAT 60.976 55.000 15.09 0.00 0.00 3.01
5170 5655 0.249489 CCGATCGTGGGAGTGGAATC 60.249 60.000 15.09 0.00 0.00 2.52
5171 5656 0.459899 CGATCGTGGGAGTGGAATCA 59.540 55.000 7.03 0.00 0.00 2.57
5172 5657 1.802880 CGATCGTGGGAGTGGAATCAC 60.803 57.143 7.03 0.00 43.93 3.06
5173 5658 1.207089 GATCGTGGGAGTGGAATCACA 59.793 52.381 0.00 0.00 45.91 3.58
5174 5659 1.052617 TCGTGGGAGTGGAATCACAA 58.947 50.000 0.00 0.00 45.91 3.33
5175 5660 1.156736 CGTGGGAGTGGAATCACAAC 58.843 55.000 0.00 0.00 45.91 3.32
5176 5661 1.542328 CGTGGGAGTGGAATCACAACA 60.542 52.381 0.00 0.00 45.91 3.33
5177 5662 2.795329 GTGGGAGTGGAATCACAACAT 58.205 47.619 0.00 0.00 45.91 2.71
5178 5663 2.749621 GTGGGAGTGGAATCACAACATC 59.250 50.000 0.00 0.00 45.91 3.06
5179 5664 2.009774 GGGAGTGGAATCACAACATCG 58.990 52.381 0.00 0.00 45.91 3.84
5180 5665 2.354704 GGGAGTGGAATCACAACATCGA 60.355 50.000 0.00 0.00 45.91 3.59
5181 5666 2.673368 GGAGTGGAATCACAACATCGAC 59.327 50.000 0.00 0.00 45.91 4.20
5182 5667 2.337583 AGTGGAATCACAACATCGACG 58.662 47.619 0.00 0.00 45.91 5.12
5183 5668 2.066262 GTGGAATCACAACATCGACGT 58.934 47.619 0.00 0.00 43.13 4.34
5184 5669 2.065512 TGGAATCACAACATCGACGTG 58.934 47.619 0.00 0.00 0.00 4.49
5185 5670 1.201921 GGAATCACAACATCGACGTGC 60.202 52.381 0.00 0.00 0.00 5.34
5186 5671 1.459209 GAATCACAACATCGACGTGCA 59.541 47.619 0.00 0.00 0.00 4.57
5187 5672 1.725641 ATCACAACATCGACGTGCAT 58.274 45.000 0.00 0.00 0.00 3.96
5188 5673 1.067693 TCACAACATCGACGTGCATC 58.932 50.000 0.00 0.00 0.00 3.91
5189 5674 0.246873 CACAACATCGACGTGCATCG 60.247 55.000 3.28 3.28 43.63 3.84
5201 5686 3.513462 CGTGCATCGTTTTTGTGTAGA 57.487 42.857 0.00 0.00 34.52 2.59
5202 5687 3.469629 CGTGCATCGTTTTTGTGTAGAG 58.530 45.455 0.00 0.00 34.52 2.43
5203 5688 3.226347 GTGCATCGTTTTTGTGTAGAGC 58.774 45.455 0.00 0.00 0.00 4.09
5204 5689 3.058914 GTGCATCGTTTTTGTGTAGAGCT 60.059 43.478 0.00 0.00 0.00 4.09
5205 5690 3.563808 TGCATCGTTTTTGTGTAGAGCTT 59.436 39.130 0.00 0.00 0.00 3.74
5206 5691 4.752604 TGCATCGTTTTTGTGTAGAGCTTA 59.247 37.500 0.00 0.00 0.00 3.09
5207 5692 5.411361 TGCATCGTTTTTGTGTAGAGCTTAT 59.589 36.000 0.00 0.00 0.00 1.73
5208 5693 5.960105 GCATCGTTTTTGTGTAGAGCTTATC 59.040 40.000 0.00 0.00 0.00 1.75
5209 5694 6.402118 GCATCGTTTTTGTGTAGAGCTTATCA 60.402 38.462 0.00 0.00 0.00 2.15
5210 5695 6.462073 TCGTTTTTGTGTAGAGCTTATCAC 57.538 37.500 8.48 8.48 0.00 3.06
5211 5696 5.118050 TCGTTTTTGTGTAGAGCTTATCACG 59.882 40.000 0.00 0.00 34.08 4.35
5212 5697 5.118050 CGTTTTTGTGTAGAGCTTATCACGA 59.882 40.000 0.00 0.00 34.08 4.35
5213 5698 6.346279 CGTTTTTGTGTAGAGCTTATCACGAA 60.346 38.462 11.87 11.87 33.94 3.85
5214 5699 7.519002 GTTTTTGTGTAGAGCTTATCACGAAT 58.481 34.615 14.79 0.00 35.19 3.34
5215 5700 6.887376 TTTGTGTAGAGCTTATCACGAATC 57.113 37.500 11.87 0.00 31.78 2.52
5216 5701 5.576447 TGTGTAGAGCTTATCACGAATCA 57.424 39.130 0.00 0.00 34.08 2.57
5217 5702 5.961272 TGTGTAGAGCTTATCACGAATCAA 58.039 37.500 0.00 0.00 34.08 2.57
5218 5703 6.394809 TGTGTAGAGCTTATCACGAATCAAA 58.605 36.000 0.00 0.00 34.08 2.69
5219 5704 6.531594 TGTGTAGAGCTTATCACGAATCAAAG 59.468 38.462 0.00 0.00 34.08 2.77
5220 5705 5.520288 TGTAGAGCTTATCACGAATCAAAGC 59.480 40.000 0.00 0.00 42.21 3.51
5221 5706 4.507710 AGAGCTTATCACGAATCAAAGCA 58.492 39.130 7.96 0.00 43.87 3.91
5222 5707 4.331168 AGAGCTTATCACGAATCAAAGCAC 59.669 41.667 7.96 1.98 43.87 4.40
5223 5708 4.002982 AGCTTATCACGAATCAAAGCACA 58.997 39.130 7.96 0.00 43.87 4.57
5224 5709 4.455533 AGCTTATCACGAATCAAAGCACAA 59.544 37.500 7.96 0.00 43.87 3.33
5225 5710 5.124457 AGCTTATCACGAATCAAAGCACAAT 59.876 36.000 7.96 0.00 43.87 2.71
5226 5711 5.801947 GCTTATCACGAATCAAAGCACAATT 59.198 36.000 0.00 0.00 41.65 2.32
5227 5712 6.966632 GCTTATCACGAATCAAAGCACAATTA 59.033 34.615 0.00 0.00 41.65 1.40
5228 5713 7.645340 GCTTATCACGAATCAAAGCACAATTAT 59.355 33.333 0.00 0.00 41.65 1.28
5229 5714 8.839947 TTATCACGAATCAAAGCACAATTATG 57.160 30.769 0.00 0.00 0.00 1.90
5230 5715 6.252967 TCACGAATCAAAGCACAATTATGT 57.747 33.333 0.00 0.00 41.61 2.29
5231 5716 7.371126 TCACGAATCAAAGCACAATTATGTA 57.629 32.000 0.00 0.00 37.82 2.29
5232 5717 7.463544 TCACGAATCAAAGCACAATTATGTAG 58.536 34.615 0.00 0.00 37.82 2.74
5233 5718 7.333174 TCACGAATCAAAGCACAATTATGTAGA 59.667 33.333 0.00 0.00 37.82 2.59
5234 5719 8.124823 CACGAATCAAAGCACAATTATGTAGAT 58.875 33.333 0.00 0.00 37.82 1.98
5235 5720 8.677300 ACGAATCAAAGCACAATTATGTAGATT 58.323 29.630 0.00 0.00 37.82 2.40
5236 5721 8.950961 CGAATCAAAGCACAATTATGTAGATTG 58.049 33.333 0.00 0.00 37.82 2.67
5237 5722 9.241317 GAATCAAAGCACAATTATGTAGATTGG 57.759 33.333 0.00 0.00 37.82 3.16
5238 5723 7.936496 TCAAAGCACAATTATGTAGATTGGA 57.064 32.000 0.00 0.00 37.82 3.53
5239 5724 8.347004 TCAAAGCACAATTATGTAGATTGGAA 57.653 30.769 0.00 0.00 37.82 3.53
5240 5725 8.461222 TCAAAGCACAATTATGTAGATTGGAAG 58.539 33.333 0.00 0.00 37.82 3.46
5241 5726 6.949352 AGCACAATTATGTAGATTGGAAGG 57.051 37.500 0.00 0.00 37.82 3.46
5242 5727 6.662755 AGCACAATTATGTAGATTGGAAGGA 58.337 36.000 0.00 0.00 37.82 3.36
5243 5728 7.118723 AGCACAATTATGTAGATTGGAAGGAA 58.881 34.615 0.00 0.00 37.82 3.36
5244 5729 7.781693 AGCACAATTATGTAGATTGGAAGGAAT 59.218 33.333 0.00 0.00 37.82 3.01
5245 5730 8.416329 GCACAATTATGTAGATTGGAAGGAATT 58.584 33.333 0.00 0.00 37.82 2.17
5246 5731 9.740239 CACAATTATGTAGATTGGAAGGAATTG 57.260 33.333 0.00 0.00 37.82 2.32
5247 5732 8.917088 ACAATTATGTAGATTGGAAGGAATTGG 58.083 33.333 0.00 0.00 38.24 3.16
5248 5733 8.362639 CAATTATGTAGATTGGAAGGAATTGGG 58.637 37.037 0.00 0.00 32.24 4.12
5249 5734 4.946160 TGTAGATTGGAAGGAATTGGGT 57.054 40.909 0.00 0.00 0.00 4.51
5250 5735 4.599041 TGTAGATTGGAAGGAATTGGGTG 58.401 43.478 0.00 0.00 0.00 4.61
5251 5736 4.290985 TGTAGATTGGAAGGAATTGGGTGA 59.709 41.667 0.00 0.00 0.00 4.02
5252 5737 4.402616 AGATTGGAAGGAATTGGGTGAA 57.597 40.909 0.00 0.00 0.00 3.18
5253 5738 4.347607 AGATTGGAAGGAATTGGGTGAAG 58.652 43.478 0.00 0.00 0.00 3.02
5254 5739 2.603075 TGGAAGGAATTGGGTGAAGG 57.397 50.000 0.00 0.00 0.00 3.46
5255 5740 2.069775 TGGAAGGAATTGGGTGAAGGA 58.930 47.619 0.00 0.00 0.00 3.36
5256 5741 2.041620 TGGAAGGAATTGGGTGAAGGAG 59.958 50.000 0.00 0.00 0.00 3.69
5257 5742 2.041755 GGAAGGAATTGGGTGAAGGAGT 59.958 50.000 0.00 0.00 0.00 3.85
5258 5743 3.265995 GGAAGGAATTGGGTGAAGGAGTA 59.734 47.826 0.00 0.00 0.00 2.59
5259 5744 4.263771 GGAAGGAATTGGGTGAAGGAGTAA 60.264 45.833 0.00 0.00 0.00 2.24
5260 5745 4.576330 AGGAATTGGGTGAAGGAGTAAG 57.424 45.455 0.00 0.00 0.00 2.34
5261 5746 3.267031 AGGAATTGGGTGAAGGAGTAAGG 59.733 47.826 0.00 0.00 0.00 2.69
5262 5747 3.265995 GGAATTGGGTGAAGGAGTAAGGA 59.734 47.826 0.00 0.00 0.00 3.36
5263 5748 4.518249 GAATTGGGTGAAGGAGTAAGGAG 58.482 47.826 0.00 0.00 0.00 3.69
5264 5749 1.276622 TGGGTGAAGGAGTAAGGAGC 58.723 55.000 0.00 0.00 0.00 4.70
5265 5750 1.203313 TGGGTGAAGGAGTAAGGAGCT 60.203 52.381 0.00 0.00 0.00 4.09
5266 5751 1.909986 GGGTGAAGGAGTAAGGAGCTT 59.090 52.381 0.00 0.00 0.00 3.74
5267 5752 3.105283 GGGTGAAGGAGTAAGGAGCTTA 58.895 50.000 0.00 0.00 0.00 3.09
5268 5753 3.712218 GGGTGAAGGAGTAAGGAGCTTAT 59.288 47.826 0.00 0.00 0.00 1.73
5269 5754 4.202274 GGGTGAAGGAGTAAGGAGCTTATC 60.202 50.000 0.00 0.00 0.00 1.75
5270 5755 4.406003 GGTGAAGGAGTAAGGAGCTTATCA 59.594 45.833 0.00 0.00 0.00 2.15
5271 5756 5.353111 GTGAAGGAGTAAGGAGCTTATCAC 58.647 45.833 0.00 0.00 29.81 3.06
5272 5757 5.023452 TGAAGGAGTAAGGAGCTTATCACA 58.977 41.667 0.00 0.00 0.00 3.58
5273 5758 5.483937 TGAAGGAGTAAGGAGCTTATCACAA 59.516 40.000 0.00 0.00 0.00 3.33
5274 5759 6.013725 TGAAGGAGTAAGGAGCTTATCACAAA 60.014 38.462 0.00 0.00 0.00 2.83
5275 5760 6.567602 AGGAGTAAGGAGCTTATCACAAAT 57.432 37.500 0.00 0.00 0.00 2.32
5276 5761 6.587273 AGGAGTAAGGAGCTTATCACAAATC 58.413 40.000 0.00 0.00 0.00 2.17
5277 5762 5.463724 GGAGTAAGGAGCTTATCACAAATCG 59.536 44.000 0.00 0.00 0.00 3.34
5278 5763 6.222038 AGTAAGGAGCTTATCACAAATCGA 57.778 37.500 0.00 0.00 0.00 3.59
5279 5764 6.640518 AGTAAGGAGCTTATCACAAATCGAA 58.359 36.000 0.00 0.00 0.00 3.71
5280 5765 6.758886 AGTAAGGAGCTTATCACAAATCGAAG 59.241 38.462 0.00 0.00 0.00 3.79
5281 5766 3.873952 AGGAGCTTATCACAAATCGAAGC 59.126 43.478 0.00 0.00 42.25 3.86
5282 5767 3.623060 GGAGCTTATCACAAATCGAAGCA 59.377 43.478 7.58 0.00 43.94 3.91
5283 5768 4.494855 GGAGCTTATCACAAATCGAAGCAC 60.495 45.833 7.58 1.34 43.94 4.40
5284 5769 3.375299 AGCTTATCACAAATCGAAGCACC 59.625 43.478 7.58 0.00 43.94 5.01
5285 5770 3.785505 GCTTATCACAAATCGAAGCACCG 60.786 47.826 0.00 0.00 41.69 4.94
5286 5771 2.093306 ATCACAAATCGAAGCACCGA 57.907 45.000 3.03 3.03 43.16 4.69
5287 5772 1.144969 TCACAAATCGAAGCACCGAC 58.855 50.000 2.60 0.00 41.70 4.79
5288 5773 1.148310 CACAAATCGAAGCACCGACT 58.852 50.000 2.60 0.00 41.70 4.18
5289 5774 1.126846 CACAAATCGAAGCACCGACTC 59.873 52.381 2.60 0.00 41.70 3.36
5290 5775 1.270094 ACAAATCGAAGCACCGACTCA 60.270 47.619 2.60 0.00 41.70 3.41
5291 5776 2.002586 CAAATCGAAGCACCGACTCAT 58.997 47.619 2.60 0.00 41.70 2.90
5292 5777 1.645034 AATCGAAGCACCGACTCATG 58.355 50.000 2.60 0.00 41.70 3.07
5293 5778 0.817654 ATCGAAGCACCGACTCATGA 59.182 50.000 2.60 0.00 41.70 3.07
5294 5779 0.171231 TCGAAGCACCGACTCATGAG 59.829 55.000 21.37 21.37 33.14 2.90
5295 5780 1.416813 CGAAGCACCGACTCATGAGC 61.417 60.000 22.83 13.93 0.00 4.26
5296 5781 1.416813 GAAGCACCGACTCATGAGCG 61.417 60.000 22.83 23.44 0.00 5.03
5297 5782 2.842394 AAGCACCGACTCATGAGCGG 62.842 60.000 35.95 35.95 46.21 5.52
5298 5783 2.887568 CACCGACTCATGAGCGGC 60.888 66.667 36.78 22.28 45.37 6.53
5299 5784 3.381983 ACCGACTCATGAGCGGCA 61.382 61.111 36.78 4.25 45.37 5.69
5300 5785 2.584418 CCGACTCATGAGCGGCAG 60.584 66.667 31.40 17.16 39.69 4.85
5301 5786 3.260483 CGACTCATGAGCGGCAGC 61.260 66.667 22.83 0.00 45.58 5.25
5312 5797 1.429423 GCGGCAGCTACATTGTTCC 59.571 57.895 0.00 0.00 41.01 3.62
5313 5798 1.993369 GCGGCAGCTACATTGTTCCC 61.993 60.000 0.00 0.00 41.01 3.97
5314 5799 0.392998 CGGCAGCTACATTGTTCCCT 60.393 55.000 0.00 0.00 0.00 4.20
5315 5800 1.383523 GGCAGCTACATTGTTCCCTC 58.616 55.000 0.00 0.00 0.00 4.30
5316 5801 1.009829 GCAGCTACATTGTTCCCTCG 58.990 55.000 0.00 0.00 0.00 4.63
5317 5802 1.656652 CAGCTACATTGTTCCCTCGG 58.343 55.000 0.00 0.00 0.00 4.63
5318 5803 1.066143 CAGCTACATTGTTCCCTCGGT 60.066 52.381 0.00 0.00 0.00 4.69
5319 5804 1.628846 AGCTACATTGTTCCCTCGGTT 59.371 47.619 0.00 0.00 0.00 4.44
5320 5805 2.007608 GCTACATTGTTCCCTCGGTTC 58.992 52.381 0.00 0.00 0.00 3.62
5321 5806 2.268298 CTACATTGTTCCCTCGGTTCG 58.732 52.381 0.00 0.00 0.00 3.95
5322 5807 0.395312 ACATTGTTCCCTCGGTTCGT 59.605 50.000 0.00 0.00 0.00 3.85
5323 5808 1.619827 ACATTGTTCCCTCGGTTCGTA 59.380 47.619 0.00 0.00 0.00 3.43
5324 5809 2.268298 CATTGTTCCCTCGGTTCGTAG 58.732 52.381 0.00 0.00 0.00 3.51
5325 5810 1.331214 TTGTTCCCTCGGTTCGTAGT 58.669 50.000 0.00 0.00 0.00 2.73
5326 5811 0.599558 TGTTCCCTCGGTTCGTAGTG 59.400 55.000 0.00 0.00 0.00 2.74
5327 5812 0.600057 GTTCCCTCGGTTCGTAGTGT 59.400 55.000 0.00 0.00 0.00 3.55
5328 5813 1.000171 GTTCCCTCGGTTCGTAGTGTT 60.000 52.381 0.00 0.00 0.00 3.32
5329 5814 0.599558 TCCCTCGGTTCGTAGTGTTG 59.400 55.000 0.00 0.00 0.00 3.33
5330 5815 1.012486 CCCTCGGTTCGTAGTGTTGC 61.012 60.000 0.00 0.00 0.00 4.17
5331 5816 1.012486 CCTCGGTTCGTAGTGTTGCC 61.012 60.000 0.00 0.00 0.00 4.52
5332 5817 1.342082 CTCGGTTCGTAGTGTTGCCG 61.342 60.000 0.00 0.00 40.43 5.69
5333 5818 2.858158 GGTTCGTAGTGTTGCCGC 59.142 61.111 0.00 0.00 0.00 6.53
5334 5819 1.957186 GGTTCGTAGTGTTGCCGCA 60.957 57.895 0.00 0.00 0.00 5.69
5335 5820 1.203313 GTTCGTAGTGTTGCCGCAC 59.797 57.895 0.00 0.09 39.51 5.34
5336 5821 1.227292 TTCGTAGTGTTGCCGCACA 60.227 52.632 9.84 0.00 41.52 4.57
5337 5822 0.601576 TTCGTAGTGTTGCCGCACAT 60.602 50.000 9.84 0.00 41.52 3.21
5338 5823 0.244178 TCGTAGTGTTGCCGCACATA 59.756 50.000 9.84 0.00 41.52 2.29
5339 5824 0.645355 CGTAGTGTTGCCGCACATAG 59.355 55.000 9.84 0.00 41.52 2.23
5340 5825 1.722011 GTAGTGTTGCCGCACATAGT 58.278 50.000 9.84 0.00 41.52 2.12
5341 5826 1.659098 GTAGTGTTGCCGCACATAGTC 59.341 52.381 9.84 0.00 41.52 2.59
5342 5827 0.321671 AGTGTTGCCGCACATAGTCT 59.678 50.000 9.84 0.00 41.52 3.24
5343 5828 1.548719 AGTGTTGCCGCACATAGTCTA 59.451 47.619 9.84 0.00 41.52 2.59
5344 5829 1.659098 GTGTTGCCGCACATAGTCTAC 59.341 52.381 0.00 0.00 39.07 2.59
5345 5830 1.273886 TGTTGCCGCACATAGTCTACA 59.726 47.619 0.00 0.00 0.00 2.74
5346 5831 2.093711 TGTTGCCGCACATAGTCTACAT 60.094 45.455 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.038975 TCCTTCCCGCCAGTAGCT 59.961 61.111 0.00 0.00 40.39 3.32
44 45 0.684805 CTAGTCTCCTTCCCGCCAGT 60.685 60.000 0.00 0.00 0.00 4.00
52 53 4.454504 GGATGTCTCGATCTAGTCTCCTTC 59.545 50.000 0.00 0.00 0.00 3.46
73 74 3.706055 GCGAAGGATTAGCATGGGA 57.294 52.632 0.00 0.00 46.45 4.37
90 91 1.278127 TGCCTTAGTGGTCTAGGTTGC 59.722 52.381 0.00 0.00 38.35 4.17
96 97 4.786454 ACCCTTTATTGCCTTAGTGGTCTA 59.214 41.667 0.00 0.00 38.35 2.59
179 180 7.177832 TGATCGATGTTAGGACCTTTCTTTA 57.822 36.000 0.54 0.00 0.00 1.85
207 209 4.584743 GGGTTTCTTGTTCCTTTCACTCAT 59.415 41.667 0.00 0.00 0.00 2.90
215 217 4.079385 ACACCTTAGGGTTTCTTGTTCCTT 60.079 41.667 2.32 0.00 44.73 3.36
330 333 5.104527 TGTGCTAGCTAATGGTTTGACCTAT 60.105 40.000 17.23 0.00 39.58 2.57
339 342 2.028476 TGTCGTTGTGCTAGCTAATGGT 60.028 45.455 17.23 0.00 0.00 3.55
567 596 8.798859 TTTGGAACAAAAGATTGAAATTCCAA 57.201 26.923 15.29 15.29 46.57 3.53
757 810 8.361139 TGAAATTCCAAAAGGCGAATAAAGTAA 58.639 29.630 0.00 0.00 0.00 2.24
758 811 7.887381 TGAAATTCCAAAAGGCGAATAAAGTA 58.113 30.769 0.00 0.00 0.00 2.24
760 813 7.650834 TTGAAATTCCAAAAGGCGAATAAAG 57.349 32.000 0.00 0.00 0.00 1.85
767 820 9.328721 GAATAAAAATTGAAATTCCAAAAGGCG 57.671 29.630 0.00 0.00 0.00 5.52
876 931 4.020839 CCACTCAGCAAAGGAAATTCCATT 60.021 41.667 15.21 5.66 39.61 3.16
916 971 1.871039 AGATGGTTGCGTTACACACAC 59.129 47.619 0.00 0.00 0.00 3.82
937 994 1.133792 CGTTCTTTAGGCCCATCCCAT 60.134 52.381 0.00 0.00 34.51 4.00
962 1019 0.908198 AGTGTGCTTTGGGCCAAAAA 59.092 45.000 30.00 19.41 40.92 1.94
1399 1456 3.691342 CACCACCTCTTCCGCCGA 61.691 66.667 0.00 0.00 0.00 5.54
1425 1482 1.313091 CGTCGTCCTCACCCTCATCA 61.313 60.000 0.00 0.00 0.00 3.07
1455 1512 1.002274 ATCAACCGCCTCCTCCTCT 59.998 57.895 0.00 0.00 0.00 3.69
1515 1587 2.036731 ACCCCCTCGTCATCGTCA 59.963 61.111 0.00 0.00 38.33 4.35
1521 1593 4.715130 CCCTCCACCCCCTCGTCA 62.715 72.222 0.00 0.00 0.00 4.35
1602 1674 1.977544 ACCACCCTCCTCTTCGTCG 60.978 63.158 0.00 0.00 0.00 5.12
1605 1677 1.592223 GTCACCACCCTCCTCTTCG 59.408 63.158 0.00 0.00 0.00 3.79
1617 1689 1.208358 GTCGTCGTCATCGTCACCA 59.792 57.895 0.00 0.00 38.33 4.17
1629 1701 4.108437 TCGTCGTCGTCGTCGTCG 62.108 66.667 20.39 20.39 45.27 5.12
1650 1722 1.366854 CGTCGTCCTCCTCGTCATCA 61.367 60.000 0.00 0.00 0.00 3.07
1689 1761 5.930135 TGAGAAATTTATACCTCAGGCTCC 58.070 41.667 0.00 0.00 32.51 4.70
1695 1767 8.258007 ACAAGACGATGAGAAATTTATACCTCA 58.742 33.333 9.10 9.10 39.60 3.86
1715 1787 8.810652 TTTAGATGCCAACAAAATTACAAGAC 57.189 30.769 0.00 0.00 0.00 3.01
1723 1795 8.200364 GCACATATTTTAGATGCCAACAAAAT 57.800 30.769 0.00 0.00 35.41 1.82
1732 1805 4.511454 TGAGACGGCACATATTTTAGATGC 59.489 41.667 0.00 0.00 35.51 3.91
1738 1811 5.086104 AGTACTGAGACGGCACATATTTT 57.914 39.130 0.00 0.00 0.00 1.82
1745 1818 1.337821 CGAAAGTACTGAGACGGCAC 58.662 55.000 0.00 0.00 0.00 5.01
1750 1823 4.152607 ACGTAACCGAAAGTACTGAGAC 57.847 45.455 0.00 0.00 37.88 3.36
1800 1874 7.780064 TGAAGACAGATCTGGAATTTCTCTAG 58.220 38.462 26.08 0.00 34.48 2.43
1834 1908 6.071952 GGTTTCTTTGAGGAAAGCATGTATCA 60.072 38.462 11.39 0.00 46.51 2.15
1898 1972 9.502091 AGATGCAACTGTCATACTTACTTTTTA 57.498 29.630 0.00 0.00 0.00 1.52
1904 1978 4.034510 GCCAGATGCAACTGTCATACTTAC 59.965 45.833 21.00 0.00 40.77 2.34
1905 1979 4.080919 AGCCAGATGCAACTGTCATACTTA 60.081 41.667 21.00 0.00 44.83 2.24
1906 1980 3.012518 GCCAGATGCAACTGTCATACTT 58.987 45.455 21.00 0.00 40.77 2.24
1907 1981 2.238144 AGCCAGATGCAACTGTCATACT 59.762 45.455 21.00 8.57 44.83 2.12
1908 1982 2.636830 AGCCAGATGCAACTGTCATAC 58.363 47.619 21.00 6.65 44.83 2.39
1909 1983 3.452264 ACTAGCCAGATGCAACTGTCATA 59.548 43.478 21.00 10.45 44.83 2.15
1910 1984 2.238144 ACTAGCCAGATGCAACTGTCAT 59.762 45.455 21.00 9.91 44.83 3.06
1911 1985 1.625315 ACTAGCCAGATGCAACTGTCA 59.375 47.619 21.00 6.29 44.83 3.58
1959 2035 2.101249 CCTGCAGGTTGAGCAAAAGAAA 59.899 45.455 25.53 0.00 42.17 2.52
1980 2056 1.599542 ACGAACACAGAGCAGAAAAGC 59.400 47.619 0.00 0.00 0.00 3.51
2270 2348 1.477558 CCCCATCTCTATTGTGTGGCC 60.478 57.143 0.00 0.00 0.00 5.36
2359 2437 5.747951 GAAATAGTGAGATTTCCTGCAGG 57.252 43.478 27.87 27.87 39.10 4.85
2383 2479 1.707427 AGGTGGCTTTGGATCTGAGTT 59.293 47.619 0.00 0.00 0.00 3.01
2447 2543 3.648545 AGTGAGAAACAAGAACTAGGCCT 59.351 43.478 11.78 11.78 0.00 5.19
2459 2555 6.650807 GTGTATTTGGATCTGAGTGAGAAACA 59.349 38.462 0.00 0.00 33.12 2.83
2498 2594 9.653287 CAAATCTGACAGACCTACACTAAATAA 57.347 33.333 7.47 0.00 0.00 1.40
2511 2639 4.434520 GCCTACTACCAAATCTGACAGAC 58.565 47.826 7.47 0.00 0.00 3.51
2525 2653 2.907634 GCCAGAAAGAAGGCCTACTAC 58.092 52.381 5.16 0.00 45.18 2.73
2550 2678 2.040145 TCATCTCCAAGCACACATGGAA 59.960 45.455 0.00 0.00 42.85 3.53
2684 2812 6.009589 TCATCACCTCCTCAGCAAAATAAAA 58.990 36.000 0.00 0.00 0.00 1.52
2825 2953 2.996249 TGTTCATCATCTCCTCAGCC 57.004 50.000 0.00 0.00 0.00 4.85
2843 2971 2.235650 TCCTCAGAAACAGCCTCTGATG 59.764 50.000 3.17 1.63 46.25 3.07
2948 3248 7.722949 TCATCTCCTTGGCAAAATAGAAAAT 57.277 32.000 0.00 0.00 0.00 1.82
2954 3254 7.664552 AATTCATCATCTCCTTGGCAAAATA 57.335 32.000 0.00 0.00 0.00 1.40
2955 3255 6.555463 AATTCATCATCTCCTTGGCAAAAT 57.445 33.333 0.00 0.00 0.00 1.82
2978 3410 2.050144 ACCTCAGAAACAGCCTCTGAA 58.950 47.619 4.27 0.00 46.58 3.02
3094 3526 5.187381 GCCTCTGATATTCATCATCTCCTCA 59.813 44.000 0.00 0.00 40.40 3.86
3136 3568 3.365472 TGCAACATAGGTAGAGCTCTGA 58.635 45.455 26.78 9.08 0.00 3.27
3137 3569 3.808466 TGCAACATAGGTAGAGCTCTG 57.192 47.619 26.78 11.59 0.00 3.35
3138 3570 4.826274 TTTGCAACATAGGTAGAGCTCT 57.174 40.909 22.17 22.17 0.00 4.09
3156 3588 7.615582 TCAGATAGGCAAATCAGTACTTTTG 57.384 36.000 13.47 13.47 36.21 2.44
3161 3593 5.858381 TGGATCAGATAGGCAAATCAGTAC 58.142 41.667 0.00 0.00 0.00 2.73
3214 3646 7.448420 TCATCATCTCCTAGGCAAAATAGAAG 58.552 38.462 2.96 0.00 0.00 2.85
3217 3649 9.902684 ATATTCATCATCTCCTAGGCAAAATAG 57.097 33.333 2.96 0.00 0.00 1.73
3282 3714 5.466393 AGGCAAATCAGTAATTTTGCAACAC 59.534 36.000 18.61 0.00 35.32 3.32
3294 3726 6.499106 TTGGATCAGATAGGCAAATCAGTA 57.501 37.500 0.00 0.00 0.00 2.74
3454 3893 4.651503 TGTCACCATTCTTTTAAAAGCCCA 59.348 37.500 20.93 9.33 35.99 5.36
3584 4023 6.750501 CGTGCAATTTCTCATCATTCTGAATT 59.249 34.615 0.00 0.00 0.00 2.17
3652 4091 9.155975 ACATAAATCAACTAGTGACAGATCAAC 57.844 33.333 0.00 0.00 39.72 3.18
3714 4156 9.988815 GACTATTATAGGAATGTTCATCACAGT 57.011 33.333 4.15 0.00 39.40 3.55
3758 4200 5.319043 AGGGTCCAAATTAGTTTGACTGA 57.681 39.130 11.94 0.00 46.03 3.41
3774 4217 1.111277 AAACAACAGTGCAAGGGTCC 58.889 50.000 0.00 0.00 0.00 4.46
3793 4236 1.687146 CCTAGCTCCTCCTGCCACA 60.687 63.158 0.00 0.00 0.00 4.17
3794 4237 0.978146 TTCCTAGCTCCTCCTGCCAC 60.978 60.000 0.00 0.00 0.00 5.01
3965 4408 2.171840 CCAGACCTCTTCCTCTTCGAA 58.828 52.381 0.00 0.00 0.00 3.71
3986 4429 1.000171 TCATCATCTTCATCCTCCGCG 60.000 52.381 0.00 0.00 0.00 6.46
3988 4431 4.244066 GTCATCATCATCTTCATCCTCCG 58.756 47.826 0.00 0.00 0.00 4.63
4121 4564 2.554370 TTTACCAACAACCCTCTCCG 57.446 50.000 0.00 0.00 0.00 4.63
4129 4572 4.766404 AGCTACAGCATTTACCAACAAC 57.234 40.909 3.70 0.00 45.16 3.32
4241 4684 3.567478 ATGCTCATACAGAAGTTCCCC 57.433 47.619 0.00 0.00 0.00 4.81
4386 4829 2.442413 ACTGTAGGTCAGAGCAGAGAC 58.558 52.381 1.66 0.00 46.27 3.36
4389 4832 3.085533 GAGAACTGTAGGTCAGAGCAGA 58.914 50.000 1.66 0.00 46.27 4.26
4452 4896 6.150976 TCCAAAGAATGTGTAAGTGCCAATAG 59.849 38.462 0.00 0.00 0.00 1.73
4467 4911 5.717119 CTTGTTGAGGGAATCCAAAGAATG 58.283 41.667 0.09 0.00 34.83 2.67
4550 5018 9.565596 GATTACGAAATCATGAAGCCAGAGCTG 62.566 44.444 0.00 0.00 44.08 4.24
4571 5039 1.739067 AGCAAGCAGAACGGGATTAC 58.261 50.000 0.00 0.00 0.00 1.89
4572 5040 2.500098 AGTAGCAAGCAGAACGGGATTA 59.500 45.455 0.00 0.00 0.00 1.75
4790 5271 2.224185 TGCCTTTTGCGACTGTAGAAGA 60.224 45.455 0.00 0.00 45.60 2.87
4840 5324 4.314440 GCAGACGGCCTGGTGACA 62.314 66.667 0.00 0.00 43.13 3.58
4847 5331 2.818132 GCATCTAGCAGACGGCCT 59.182 61.111 0.00 0.00 46.50 5.19
4922 5406 8.087750 GTGATATTTTCAGTCCACCAAAATTCA 58.912 33.333 0.00 0.00 34.17 2.57
4926 5410 6.516527 GCAGTGATATTTTCAGTCCACCAAAA 60.517 38.462 0.00 0.00 35.76 2.44
4928 5412 4.458989 GCAGTGATATTTTCAGTCCACCAA 59.541 41.667 0.00 0.00 35.76 3.67
4931 5415 3.378427 GGGCAGTGATATTTTCAGTCCAC 59.622 47.826 0.00 0.00 35.76 4.02
4935 5419 4.851639 AGAGGGCAGTGATATTTTCAGT 57.148 40.909 0.00 0.00 38.61 3.41
4936 5420 6.825721 AGTTAAGAGGGCAGTGATATTTTCAG 59.174 38.462 0.00 0.00 34.17 3.02
4938 5422 8.910351 ATAGTTAAGAGGGCAGTGATATTTTC 57.090 34.615 0.00 0.00 0.00 2.29
4939 5423 9.700831 AAATAGTTAAGAGGGCAGTGATATTTT 57.299 29.630 0.00 0.00 0.00 1.82
4945 5429 7.769044 GTGATTAAATAGTTAAGAGGGCAGTGA 59.231 37.037 1.55 0.00 32.76 3.41
4948 5432 8.562892 CATGTGATTAAATAGTTAAGAGGGCAG 58.437 37.037 1.55 0.00 32.76 4.85
4949 5433 8.052748 ACATGTGATTAAATAGTTAAGAGGGCA 58.947 33.333 0.00 0.00 32.76 5.36
4950 5434 8.451908 ACATGTGATTAAATAGTTAAGAGGGC 57.548 34.615 0.00 0.00 32.76 5.19
4968 5453 5.598416 ATCTCCTACGAATCAACATGTGA 57.402 39.130 0.00 0.00 41.67 3.58
4999 5484 9.843334 TTTTTGTTTCGACAATTGTAAACTACT 57.157 25.926 25.97 0.54 33.89 2.57
5023 5508 9.581099 CCACACAATTTTCTAGTTGTAAGTTTT 57.419 29.630 0.00 0.00 36.48 2.43
5024 5509 8.962679 TCCACACAATTTTCTAGTTGTAAGTTT 58.037 29.630 0.00 0.00 36.48 2.66
5025 5510 8.514330 TCCACACAATTTTCTAGTTGTAAGTT 57.486 30.769 0.00 0.00 36.48 2.66
5026 5511 8.514330 TTCCACACAATTTTCTAGTTGTAAGT 57.486 30.769 0.00 0.00 36.48 2.24
5027 5512 9.398170 CATTCCACACAATTTTCTAGTTGTAAG 57.602 33.333 0.00 0.00 36.48 2.34
5028 5513 8.356657 CCATTCCACACAATTTTCTAGTTGTAA 58.643 33.333 0.00 0.00 36.48 2.41
5029 5514 7.504238 ACCATTCCACACAATTTTCTAGTTGTA 59.496 33.333 0.00 0.00 36.48 2.41
5030 5515 6.323739 ACCATTCCACACAATTTTCTAGTTGT 59.676 34.615 0.00 0.00 39.00 3.32
5031 5516 6.642131 CACCATTCCACACAATTTTCTAGTTG 59.358 38.462 0.00 0.00 0.00 3.16
5032 5517 6.549364 TCACCATTCCACACAATTTTCTAGTT 59.451 34.615 0.00 0.00 0.00 2.24
5033 5518 6.068010 TCACCATTCCACACAATTTTCTAGT 58.932 36.000 0.00 0.00 0.00 2.57
5034 5519 6.349611 CCTCACCATTCCACACAATTTTCTAG 60.350 42.308 0.00 0.00 0.00 2.43
5035 5520 5.476599 CCTCACCATTCCACACAATTTTCTA 59.523 40.000 0.00 0.00 0.00 2.10
5036 5521 4.281688 CCTCACCATTCCACACAATTTTCT 59.718 41.667 0.00 0.00 0.00 2.52
5037 5522 4.559153 CCTCACCATTCCACACAATTTTC 58.441 43.478 0.00 0.00 0.00 2.29
5038 5523 3.324556 CCCTCACCATTCCACACAATTTT 59.675 43.478 0.00 0.00 0.00 1.82
5039 5524 2.899256 CCCTCACCATTCCACACAATTT 59.101 45.455 0.00 0.00 0.00 1.82
5040 5525 2.528564 CCCTCACCATTCCACACAATT 58.471 47.619 0.00 0.00 0.00 2.32
5041 5526 1.272648 CCCCTCACCATTCCACACAAT 60.273 52.381 0.00 0.00 0.00 2.71
5042 5527 0.112218 CCCCTCACCATTCCACACAA 59.888 55.000 0.00 0.00 0.00 3.33
5043 5528 0.770166 TCCCCTCACCATTCCACACA 60.770 55.000 0.00 0.00 0.00 3.72
5044 5529 0.404040 TTCCCCTCACCATTCCACAC 59.596 55.000 0.00 0.00 0.00 3.82
5045 5530 0.698238 CTTCCCCTCACCATTCCACA 59.302 55.000 0.00 0.00 0.00 4.17
5046 5531 0.681243 GCTTCCCCTCACCATTCCAC 60.681 60.000 0.00 0.00 0.00 4.02
5047 5532 1.691219 GCTTCCCCTCACCATTCCA 59.309 57.895 0.00 0.00 0.00 3.53
5048 5533 1.076705 GGCTTCCCCTCACCATTCC 60.077 63.158 0.00 0.00 0.00 3.01
5049 5534 0.681243 GTGGCTTCCCCTCACCATTC 60.681 60.000 0.00 0.00 34.04 2.67
5050 5535 1.142688 AGTGGCTTCCCCTCACCATT 61.143 55.000 0.00 0.00 34.04 3.16
5051 5536 1.542375 AGTGGCTTCCCCTCACCAT 60.542 57.895 0.00 0.00 34.04 3.55
5052 5537 2.121963 AGTGGCTTCCCCTCACCA 60.122 61.111 0.00 0.00 32.29 4.17
5053 5538 1.779061 TTGAGTGGCTTCCCCTCACC 61.779 60.000 0.00 0.00 37.82 4.02
5054 5539 0.110486 TTTGAGTGGCTTCCCCTCAC 59.890 55.000 0.00 0.00 37.82 3.51
5055 5540 0.401738 CTTTGAGTGGCTTCCCCTCA 59.598 55.000 0.00 0.00 36.94 3.86
5056 5541 0.322906 CCTTTGAGTGGCTTCCCCTC 60.323 60.000 0.00 0.00 0.00 4.30
5057 5542 0.772124 TCCTTTGAGTGGCTTCCCCT 60.772 55.000 0.00 0.00 0.00 4.79
5058 5543 0.112412 TTCCTTTGAGTGGCTTCCCC 59.888 55.000 0.00 0.00 0.00 4.81
5059 5544 1.995376 TTTCCTTTGAGTGGCTTCCC 58.005 50.000 0.00 0.00 0.00 3.97
5060 5545 4.039124 TGAAATTTCCTTTGAGTGGCTTCC 59.961 41.667 15.48 0.00 0.00 3.46
5061 5546 5.200368 TGAAATTTCCTTTGAGTGGCTTC 57.800 39.130 15.48 0.00 0.00 3.86
5062 5547 5.612725 TTGAAATTTCCTTTGAGTGGCTT 57.387 34.783 15.48 0.00 0.00 4.35
5063 5548 5.359756 GTTTGAAATTTCCTTTGAGTGGCT 58.640 37.500 15.48 0.00 0.00 4.75
5064 5549 4.209080 CGTTTGAAATTTCCTTTGAGTGGC 59.791 41.667 15.48 0.00 0.00 5.01
5065 5550 4.744631 CCGTTTGAAATTTCCTTTGAGTGG 59.255 41.667 15.48 3.46 0.00 4.00
5066 5551 4.209080 GCCGTTTGAAATTTCCTTTGAGTG 59.791 41.667 15.48 0.00 0.00 3.51
5067 5552 4.368315 GCCGTTTGAAATTTCCTTTGAGT 58.632 39.130 15.48 0.00 0.00 3.41
5068 5553 3.740832 GGCCGTTTGAAATTTCCTTTGAG 59.259 43.478 15.48 1.91 0.00 3.02
5069 5554 3.386402 AGGCCGTTTGAAATTTCCTTTGA 59.614 39.130 15.48 0.00 0.00 2.69
5070 5555 3.727726 AGGCCGTTTGAAATTTCCTTTG 58.272 40.909 15.48 3.57 0.00 2.77
5071 5556 5.621329 CGATAGGCCGTTTGAAATTTCCTTT 60.621 40.000 15.48 0.00 0.00 3.11
5072 5557 4.142469 CGATAGGCCGTTTGAAATTTCCTT 60.142 41.667 15.48 0.00 0.00 3.36
5073 5558 3.377172 CGATAGGCCGTTTGAAATTTCCT 59.623 43.478 15.48 6.65 0.00 3.36
5074 5559 3.128068 ACGATAGGCCGTTTGAAATTTCC 59.872 43.478 15.48 0.00 40.17 3.13
5075 5560 4.351131 ACGATAGGCCGTTTGAAATTTC 57.649 40.909 11.41 11.41 40.17 2.17
5076 5561 5.163693 CCTTACGATAGGCCGTTTGAAATTT 60.164 40.000 0.00 0.00 43.20 1.82
5077 5562 4.334481 CCTTACGATAGGCCGTTTGAAATT 59.666 41.667 0.00 0.00 43.20 1.82
5078 5563 3.875134 CCTTACGATAGGCCGTTTGAAAT 59.125 43.478 0.00 0.00 43.20 2.17
5079 5564 3.055963 TCCTTACGATAGGCCGTTTGAAA 60.056 43.478 0.00 0.00 43.20 2.69
5080 5565 2.496871 TCCTTACGATAGGCCGTTTGAA 59.503 45.455 0.00 0.00 43.20 2.69
5081 5566 2.101783 TCCTTACGATAGGCCGTTTGA 58.898 47.619 0.00 0.00 43.20 2.69
5082 5567 2.199236 GTCCTTACGATAGGCCGTTTG 58.801 52.381 0.00 0.00 43.20 2.93
5083 5568 1.137675 GGTCCTTACGATAGGCCGTTT 59.862 52.381 0.00 0.00 43.20 3.60
5084 5569 0.749049 GGTCCTTACGATAGGCCGTT 59.251 55.000 0.00 0.00 43.20 4.44
5085 5570 1.111715 GGGTCCTTACGATAGGCCGT 61.112 60.000 0.00 0.00 45.54 5.68
5086 5571 1.111116 TGGGTCCTTACGATAGGCCG 61.111 60.000 0.00 0.00 43.77 6.13
5087 5572 1.125633 TTGGGTCCTTACGATAGGCC 58.874 55.000 0.00 0.00 43.77 5.19
5088 5573 2.093341 TGTTTGGGTCCTTACGATAGGC 60.093 50.000 0.00 0.00 43.77 3.93
5089 5574 3.899052 TGTTTGGGTCCTTACGATAGG 57.101 47.619 0.00 0.00 43.77 2.57
5090 5575 5.018539 TCATGTTTGGGTCCTTACGATAG 57.981 43.478 0.00 0.00 46.19 2.08
5091 5576 5.180271 GTTCATGTTTGGGTCCTTACGATA 58.820 41.667 0.00 0.00 0.00 2.92
5092 5577 3.992943 TCATGTTTGGGTCCTTACGAT 57.007 42.857 0.00 0.00 0.00 3.73
5093 5578 3.181453 TGTTCATGTTTGGGTCCTTACGA 60.181 43.478 0.00 0.00 0.00 3.43
5094 5579 3.142951 TGTTCATGTTTGGGTCCTTACG 58.857 45.455 0.00 0.00 0.00 3.18
5095 5580 4.764823 TCATGTTCATGTTTGGGTCCTTAC 59.235 41.667 11.73 0.00 0.00 2.34
5096 5581 4.991776 TCATGTTCATGTTTGGGTCCTTA 58.008 39.130 11.73 0.00 0.00 2.69
5097 5582 3.843422 TCATGTTCATGTTTGGGTCCTT 58.157 40.909 11.73 0.00 0.00 3.36
5098 5583 3.524095 TCATGTTCATGTTTGGGTCCT 57.476 42.857 11.73 0.00 0.00 3.85
5099 5584 4.599047 TTTCATGTTCATGTTTGGGTCC 57.401 40.909 11.73 0.00 0.00 4.46
5100 5585 6.222389 TCAATTTCATGTTCATGTTTGGGTC 58.778 36.000 11.73 0.00 0.00 4.46
5101 5586 6.172136 TCAATTTCATGTTCATGTTTGGGT 57.828 33.333 11.73 0.00 0.00 4.51
5102 5587 6.930164 TCTTCAATTTCATGTTCATGTTTGGG 59.070 34.615 11.73 10.40 0.00 4.12
5103 5588 7.949903 TCTTCAATTTCATGTTCATGTTTGG 57.050 32.000 11.73 5.08 0.00 3.28
5113 5598 9.846248 GCTTACTGTAATTCTTCAATTTCATGT 57.154 29.630 0.00 0.00 33.95 3.21
5114 5599 9.003112 CGCTTACTGTAATTCTTCAATTTCATG 57.997 33.333 0.00 0.00 33.95 3.07
5115 5600 8.946085 TCGCTTACTGTAATTCTTCAATTTCAT 58.054 29.630 0.00 0.00 33.95 2.57
5116 5601 8.317891 TCGCTTACTGTAATTCTTCAATTTCA 57.682 30.769 0.00 0.00 33.95 2.69
5117 5602 9.607285 TTTCGCTTACTGTAATTCTTCAATTTC 57.393 29.630 0.00 0.00 33.95 2.17
5118 5603 9.394477 GTTTCGCTTACTGTAATTCTTCAATTT 57.606 29.630 0.00 0.00 33.95 1.82
5119 5604 8.784043 AGTTTCGCTTACTGTAATTCTTCAATT 58.216 29.630 0.00 0.00 36.18 2.32
5120 5605 8.324163 AGTTTCGCTTACTGTAATTCTTCAAT 57.676 30.769 0.00 0.00 0.00 2.57
5121 5606 7.724305 AGTTTCGCTTACTGTAATTCTTCAA 57.276 32.000 0.00 0.00 0.00 2.69
5122 5607 8.086522 ACTAGTTTCGCTTACTGTAATTCTTCA 58.913 33.333 0.00 0.00 0.00 3.02
5123 5608 8.463456 ACTAGTTTCGCTTACTGTAATTCTTC 57.537 34.615 0.00 0.00 0.00 2.87
5124 5609 9.918630 TTACTAGTTTCGCTTACTGTAATTCTT 57.081 29.630 0.00 0.00 0.00 2.52
5125 5610 9.351570 GTTACTAGTTTCGCTTACTGTAATTCT 57.648 33.333 0.00 0.00 30.03 2.40
5126 5611 8.590470 GGTTACTAGTTTCGCTTACTGTAATTC 58.410 37.037 0.00 0.00 30.03 2.17
5127 5612 7.274250 CGGTTACTAGTTTCGCTTACTGTAATT 59.726 37.037 0.00 0.00 30.03 1.40
5128 5613 6.749118 CGGTTACTAGTTTCGCTTACTGTAAT 59.251 38.462 0.00 0.00 30.03 1.89
5129 5614 6.072728 TCGGTTACTAGTTTCGCTTACTGTAA 60.073 38.462 0.00 0.00 0.00 2.41
5130 5615 5.411361 TCGGTTACTAGTTTCGCTTACTGTA 59.589 40.000 0.00 0.00 0.00 2.74
5131 5616 4.216257 TCGGTTACTAGTTTCGCTTACTGT 59.784 41.667 0.00 0.00 0.00 3.55
5132 5617 4.726416 TCGGTTACTAGTTTCGCTTACTG 58.274 43.478 0.00 0.00 0.00 2.74
5133 5618 5.573337 ATCGGTTACTAGTTTCGCTTACT 57.427 39.130 0.00 0.00 0.00 2.24
5134 5619 4.435877 CGATCGGTTACTAGTTTCGCTTAC 59.564 45.833 7.38 0.00 0.00 2.34
5135 5620 4.094887 ACGATCGGTTACTAGTTTCGCTTA 59.905 41.667 20.98 0.00 0.00 3.09
5136 5621 3.119708 ACGATCGGTTACTAGTTTCGCTT 60.120 43.478 20.98 0.00 0.00 4.68
5137 5622 2.421424 ACGATCGGTTACTAGTTTCGCT 59.579 45.455 20.98 0.00 0.00 4.93
5138 5623 2.529090 CACGATCGGTTACTAGTTTCGC 59.471 50.000 20.98 0.00 0.00 4.70
5139 5624 3.103738 CCACGATCGGTTACTAGTTTCG 58.896 50.000 20.98 3.25 0.00 3.46
5140 5625 3.129287 TCCCACGATCGGTTACTAGTTTC 59.871 47.826 20.98 0.00 0.00 2.78
5141 5626 3.091545 TCCCACGATCGGTTACTAGTTT 58.908 45.455 20.98 0.00 0.00 2.66
5142 5627 2.686915 CTCCCACGATCGGTTACTAGTT 59.313 50.000 20.98 0.00 0.00 2.24
5143 5628 2.295885 CTCCCACGATCGGTTACTAGT 58.704 52.381 20.98 0.00 0.00 2.57
5144 5629 2.033049 CACTCCCACGATCGGTTACTAG 59.967 54.545 20.98 10.91 0.00 2.57
5145 5630 2.019249 CACTCCCACGATCGGTTACTA 58.981 52.381 20.98 0.00 0.00 1.82
5146 5631 0.815734 CACTCCCACGATCGGTTACT 59.184 55.000 20.98 0.00 0.00 2.24
5147 5632 0.179119 CCACTCCCACGATCGGTTAC 60.179 60.000 20.98 0.00 0.00 2.50
5148 5633 0.323633 TCCACTCCCACGATCGGTTA 60.324 55.000 20.98 0.72 0.00 2.85
5149 5634 1.189524 TTCCACTCCCACGATCGGTT 61.190 55.000 20.98 0.00 0.00 4.44
5150 5635 0.976073 ATTCCACTCCCACGATCGGT 60.976 55.000 20.98 3.92 0.00 4.69
5151 5636 0.249489 GATTCCACTCCCACGATCGG 60.249 60.000 20.98 8.32 0.00 4.18
5152 5637 0.459899 TGATTCCACTCCCACGATCG 59.540 55.000 14.88 14.88 0.00 3.69
5153 5638 1.207089 TGTGATTCCACTCCCACGATC 59.793 52.381 0.00 0.00 43.55 3.69
5154 5639 1.275666 TGTGATTCCACTCCCACGAT 58.724 50.000 0.00 0.00 43.55 3.73
5155 5640 1.052617 TTGTGATTCCACTCCCACGA 58.947 50.000 0.00 0.00 43.55 4.35
5156 5641 1.156736 GTTGTGATTCCACTCCCACG 58.843 55.000 0.00 0.00 43.55 4.94
5157 5642 2.270352 TGTTGTGATTCCACTCCCAC 57.730 50.000 0.00 0.00 43.55 4.61
5158 5643 2.615240 CGATGTTGTGATTCCACTCCCA 60.615 50.000 0.00 0.00 43.55 4.37
5159 5644 2.009774 CGATGTTGTGATTCCACTCCC 58.990 52.381 0.00 0.00 43.55 4.30
5160 5645 2.673368 GTCGATGTTGTGATTCCACTCC 59.327 50.000 0.00 0.00 43.55 3.85
5161 5646 2.345641 CGTCGATGTTGTGATTCCACTC 59.654 50.000 0.00 0.00 43.55 3.51
5162 5647 2.288825 ACGTCGATGTTGTGATTCCACT 60.289 45.455 3.92 0.00 43.55 4.00
5163 5648 2.066262 ACGTCGATGTTGTGATTCCAC 58.934 47.619 3.92 0.00 43.46 4.02
5164 5649 2.065512 CACGTCGATGTTGTGATTCCA 58.934 47.619 7.76 0.00 35.66 3.53
5165 5650 1.201921 GCACGTCGATGTTGTGATTCC 60.202 52.381 7.76 0.00 35.66 3.01
5166 5651 1.459209 TGCACGTCGATGTTGTGATTC 59.541 47.619 7.76 0.00 35.66 2.52
5167 5652 1.507562 TGCACGTCGATGTTGTGATT 58.492 45.000 7.76 0.00 35.66 2.57
5168 5653 1.660607 GATGCACGTCGATGTTGTGAT 59.339 47.619 7.76 0.00 35.66 3.06
5169 5654 1.067693 GATGCACGTCGATGTTGTGA 58.932 50.000 7.76 0.00 35.66 3.58
5170 5655 0.246873 CGATGCACGTCGATGTTGTG 60.247 55.000 7.76 6.62 44.06 3.33
5171 5656 2.070049 CGATGCACGTCGATGTTGT 58.930 52.632 7.76 0.00 44.06 3.32
5172 5657 4.932050 CGATGCACGTCGATGTTG 57.068 55.556 7.76 5.26 44.06 3.33
5182 5667 3.058914 AGCTCTACACAAAAACGATGCAC 60.059 43.478 0.00 0.00 0.00 4.57
5183 5668 3.138304 AGCTCTACACAAAAACGATGCA 58.862 40.909 0.00 0.00 0.00 3.96
5184 5669 3.813529 AGCTCTACACAAAAACGATGC 57.186 42.857 0.00 0.00 0.00 3.91
5185 5670 6.955963 GTGATAAGCTCTACACAAAAACGATG 59.044 38.462 10.71 0.00 34.05 3.84
5186 5671 6.183360 CGTGATAAGCTCTACACAAAAACGAT 60.183 38.462 14.27 0.00 33.56 3.73
5187 5672 5.118050 CGTGATAAGCTCTACACAAAAACGA 59.882 40.000 14.27 0.00 33.56 3.85
5188 5673 5.118050 TCGTGATAAGCTCTACACAAAAACG 59.882 40.000 14.27 0.00 33.56 3.60
5189 5674 6.462073 TCGTGATAAGCTCTACACAAAAAC 57.538 37.500 14.27 0.00 33.56 2.43
5190 5675 7.386573 TGATTCGTGATAAGCTCTACACAAAAA 59.613 33.333 14.27 7.80 33.56 1.94
5191 5676 6.871492 TGATTCGTGATAAGCTCTACACAAAA 59.129 34.615 14.27 9.52 33.56 2.44
5192 5677 6.394809 TGATTCGTGATAAGCTCTACACAAA 58.605 36.000 14.27 5.75 33.56 2.83
5193 5678 5.961272 TGATTCGTGATAAGCTCTACACAA 58.039 37.500 14.27 9.46 33.56 3.33
5194 5679 5.576447 TGATTCGTGATAAGCTCTACACA 57.424 39.130 14.27 0.90 33.56 3.72
5195 5680 6.508721 GCTTTGATTCGTGATAAGCTCTACAC 60.509 42.308 0.00 0.00 38.47 2.90
5196 5681 5.520288 GCTTTGATTCGTGATAAGCTCTACA 59.480 40.000 0.00 0.00 38.47 2.74
5197 5682 5.520288 TGCTTTGATTCGTGATAAGCTCTAC 59.480 40.000 0.00 0.00 41.25 2.59
5198 5683 5.520288 GTGCTTTGATTCGTGATAAGCTCTA 59.480 40.000 0.00 0.00 41.25 2.43
5199 5684 4.331168 GTGCTTTGATTCGTGATAAGCTCT 59.669 41.667 0.00 0.00 41.25 4.09
5200 5685 4.093408 TGTGCTTTGATTCGTGATAAGCTC 59.907 41.667 0.00 0.00 41.25 4.09
5201 5686 4.002982 TGTGCTTTGATTCGTGATAAGCT 58.997 39.130 0.00 0.00 41.25 3.74
5202 5687 4.340894 TGTGCTTTGATTCGTGATAAGC 57.659 40.909 0.00 0.00 41.10 3.09
5203 5688 8.950961 CATAATTGTGCTTTGATTCGTGATAAG 58.049 33.333 0.00 0.00 0.00 1.73
5204 5689 8.458052 ACATAATTGTGCTTTGATTCGTGATAA 58.542 29.630 1.57 0.00 33.85 1.75
5205 5690 7.984391 ACATAATTGTGCTTTGATTCGTGATA 58.016 30.769 1.57 0.00 33.85 2.15
5206 5691 6.855836 ACATAATTGTGCTTTGATTCGTGAT 58.144 32.000 1.57 0.00 33.85 3.06
5207 5692 6.252967 ACATAATTGTGCTTTGATTCGTGA 57.747 33.333 1.57 0.00 33.85 4.35
5208 5693 7.463544 TCTACATAATTGTGCTTTGATTCGTG 58.536 34.615 1.57 0.00 36.53 4.35
5209 5694 7.609760 TCTACATAATTGTGCTTTGATTCGT 57.390 32.000 1.57 0.00 36.53 3.85
5210 5695 8.950961 CAATCTACATAATTGTGCTTTGATTCG 58.049 33.333 1.57 1.01 36.53 3.34
5211 5696 9.241317 CCAATCTACATAATTGTGCTTTGATTC 57.759 33.333 1.57 0.00 36.53 2.52
5212 5697 8.970020 TCCAATCTACATAATTGTGCTTTGATT 58.030 29.630 1.57 4.86 36.53 2.57
5213 5698 8.523915 TCCAATCTACATAATTGTGCTTTGAT 57.476 30.769 1.57 0.00 36.53 2.57
5214 5699 7.936496 TCCAATCTACATAATTGTGCTTTGA 57.064 32.000 1.57 0.00 36.53 2.69
5215 5700 7.703621 CCTTCCAATCTACATAATTGTGCTTTG 59.296 37.037 1.57 1.99 36.53 2.77
5216 5701 7.615365 TCCTTCCAATCTACATAATTGTGCTTT 59.385 33.333 1.57 0.00 36.53 3.51
5217 5702 7.118723 TCCTTCCAATCTACATAATTGTGCTT 58.881 34.615 1.57 0.00 36.53 3.91
5218 5703 6.662755 TCCTTCCAATCTACATAATTGTGCT 58.337 36.000 1.57 0.00 36.53 4.40
5219 5704 6.942532 TCCTTCCAATCTACATAATTGTGC 57.057 37.500 1.57 0.00 36.53 4.57
5220 5705 9.740239 CAATTCCTTCCAATCTACATAATTGTG 57.260 33.333 0.00 0.00 36.53 3.33
5221 5706 8.917088 CCAATTCCTTCCAATCTACATAATTGT 58.083 33.333 0.00 0.00 39.98 2.71
5222 5707 8.362639 CCCAATTCCTTCCAATCTACATAATTG 58.637 37.037 0.00 0.00 34.55 2.32
5223 5708 8.067488 ACCCAATTCCTTCCAATCTACATAATT 58.933 33.333 0.00 0.00 0.00 1.40
5224 5709 7.506938 CACCCAATTCCTTCCAATCTACATAAT 59.493 37.037 0.00 0.00 0.00 1.28
5225 5710 6.833416 CACCCAATTCCTTCCAATCTACATAA 59.167 38.462 0.00 0.00 0.00 1.90
5226 5711 6.159575 TCACCCAATTCCTTCCAATCTACATA 59.840 38.462 0.00 0.00 0.00 2.29
5227 5712 5.044179 TCACCCAATTCCTTCCAATCTACAT 60.044 40.000 0.00 0.00 0.00 2.29
5228 5713 4.290985 TCACCCAATTCCTTCCAATCTACA 59.709 41.667 0.00 0.00 0.00 2.74
5229 5714 4.855340 TCACCCAATTCCTTCCAATCTAC 58.145 43.478 0.00 0.00 0.00 2.59
5230 5715 5.509498 CTTCACCCAATTCCTTCCAATCTA 58.491 41.667 0.00 0.00 0.00 1.98
5231 5716 4.347607 CTTCACCCAATTCCTTCCAATCT 58.652 43.478 0.00 0.00 0.00 2.40
5232 5717 3.448660 CCTTCACCCAATTCCTTCCAATC 59.551 47.826 0.00 0.00 0.00 2.67
5233 5718 3.077391 TCCTTCACCCAATTCCTTCCAAT 59.923 43.478 0.00 0.00 0.00 3.16
5234 5719 2.448961 TCCTTCACCCAATTCCTTCCAA 59.551 45.455 0.00 0.00 0.00 3.53
5235 5720 2.041620 CTCCTTCACCCAATTCCTTCCA 59.958 50.000 0.00 0.00 0.00 3.53
5236 5721 2.041755 ACTCCTTCACCCAATTCCTTCC 59.958 50.000 0.00 0.00 0.00 3.46
5237 5722 3.441500 ACTCCTTCACCCAATTCCTTC 57.558 47.619 0.00 0.00 0.00 3.46
5238 5723 4.263949 CCTTACTCCTTCACCCAATTCCTT 60.264 45.833 0.00 0.00 0.00 3.36
5239 5724 3.267031 CCTTACTCCTTCACCCAATTCCT 59.733 47.826 0.00 0.00 0.00 3.36
5240 5725 3.265995 TCCTTACTCCTTCACCCAATTCC 59.734 47.826 0.00 0.00 0.00 3.01
5241 5726 4.518249 CTCCTTACTCCTTCACCCAATTC 58.482 47.826 0.00 0.00 0.00 2.17
5242 5727 3.308473 GCTCCTTACTCCTTCACCCAATT 60.308 47.826 0.00 0.00 0.00 2.32
5243 5728 2.239907 GCTCCTTACTCCTTCACCCAAT 59.760 50.000 0.00 0.00 0.00 3.16
5244 5729 1.628846 GCTCCTTACTCCTTCACCCAA 59.371 52.381 0.00 0.00 0.00 4.12
5245 5730 1.203313 AGCTCCTTACTCCTTCACCCA 60.203 52.381 0.00 0.00 0.00 4.51
5246 5731 1.574263 AGCTCCTTACTCCTTCACCC 58.426 55.000 0.00 0.00 0.00 4.61
5247 5732 4.406003 TGATAAGCTCCTTACTCCTTCACC 59.594 45.833 0.00 0.00 0.00 4.02
5248 5733 5.105310 TGTGATAAGCTCCTTACTCCTTCAC 60.105 44.000 0.00 7.95 34.37 3.18
5249 5734 5.023452 TGTGATAAGCTCCTTACTCCTTCA 58.977 41.667 0.00 0.00 0.00 3.02
5250 5735 5.599999 TGTGATAAGCTCCTTACTCCTTC 57.400 43.478 0.00 0.00 0.00 3.46
5251 5736 6.374417 TTTGTGATAAGCTCCTTACTCCTT 57.626 37.500 0.00 0.00 0.00 3.36
5252 5737 6.567602 ATTTGTGATAAGCTCCTTACTCCT 57.432 37.500 0.00 0.00 0.00 3.69
5253 5738 5.463724 CGATTTGTGATAAGCTCCTTACTCC 59.536 44.000 0.00 0.00 0.00 3.85
5254 5739 6.273825 TCGATTTGTGATAAGCTCCTTACTC 58.726 40.000 0.00 0.00 0.00 2.59
5255 5740 6.222038 TCGATTTGTGATAAGCTCCTTACT 57.778 37.500 0.00 0.00 0.00 2.24
5256 5741 6.510317 GCTTCGATTTGTGATAAGCTCCTTAC 60.510 42.308 0.00 0.00 39.51 2.34
5257 5742 5.523916 GCTTCGATTTGTGATAAGCTCCTTA 59.476 40.000 0.00 0.00 39.51 2.69
5258 5743 4.333926 GCTTCGATTTGTGATAAGCTCCTT 59.666 41.667 0.00 0.00 39.51 3.36
5259 5744 3.873952 GCTTCGATTTGTGATAAGCTCCT 59.126 43.478 0.00 0.00 39.51 3.69
5260 5745 3.623060 TGCTTCGATTTGTGATAAGCTCC 59.377 43.478 0.00 0.00 42.34 4.70
5261 5746 4.494855 GGTGCTTCGATTTGTGATAAGCTC 60.495 45.833 0.00 0.00 42.34 4.09
5262 5747 3.375299 GGTGCTTCGATTTGTGATAAGCT 59.625 43.478 0.00 0.00 42.34 3.74
5263 5748 3.685058 GGTGCTTCGATTTGTGATAAGC 58.315 45.455 0.00 0.00 42.22 3.09
5264 5749 3.616821 TCGGTGCTTCGATTTGTGATAAG 59.383 43.478 0.00 0.00 33.92 1.73
5265 5750 3.369756 GTCGGTGCTTCGATTTGTGATAA 59.630 43.478 5.38 0.00 41.40 1.75
5266 5751 2.927477 GTCGGTGCTTCGATTTGTGATA 59.073 45.455 5.38 0.00 41.40 2.15
5267 5752 1.732259 GTCGGTGCTTCGATTTGTGAT 59.268 47.619 5.38 0.00 41.40 3.06
5268 5753 1.144969 GTCGGTGCTTCGATTTGTGA 58.855 50.000 5.38 0.00 41.40 3.58
5269 5754 1.126846 GAGTCGGTGCTTCGATTTGTG 59.873 52.381 5.38 0.00 41.40 3.33
5270 5755 1.270094 TGAGTCGGTGCTTCGATTTGT 60.270 47.619 5.38 0.00 41.40 2.83
5271 5756 1.428448 TGAGTCGGTGCTTCGATTTG 58.572 50.000 5.38 0.00 41.40 2.32
5272 5757 2.002586 CATGAGTCGGTGCTTCGATTT 58.997 47.619 5.38 0.00 41.40 2.17
5273 5758 1.204704 TCATGAGTCGGTGCTTCGATT 59.795 47.619 0.00 1.69 41.40 3.34
5274 5759 0.817654 TCATGAGTCGGTGCTTCGAT 59.182 50.000 0.00 0.00 41.40 3.59
5275 5760 0.171231 CTCATGAGTCGGTGCTTCGA 59.829 55.000 14.95 0.00 36.76 3.71
5276 5761 1.416813 GCTCATGAGTCGGTGCTTCG 61.417 60.000 23.38 0.00 0.00 3.79
5277 5762 1.416813 CGCTCATGAGTCGGTGCTTC 61.417 60.000 23.38 3.08 0.00 3.86
5278 5763 1.446792 CGCTCATGAGTCGGTGCTT 60.447 57.895 23.38 0.00 0.00 3.91
5279 5764 2.182791 CGCTCATGAGTCGGTGCT 59.817 61.111 23.38 0.00 0.00 4.40
5280 5765 2.887568 CCGCTCATGAGTCGGTGC 60.888 66.667 32.61 17.54 40.59 5.01
5281 5766 2.887568 GCCGCTCATGAGTCGGTG 60.888 66.667 36.46 23.83 44.27 4.94
5282 5767 3.362399 CTGCCGCTCATGAGTCGGT 62.362 63.158 36.46 0.00 44.27 4.69
5283 5768 2.584418 CTGCCGCTCATGAGTCGG 60.584 66.667 34.74 34.74 44.80 4.79
5284 5769 2.341807 TAGCTGCCGCTCATGAGTCG 62.342 60.000 23.38 23.65 45.15 4.18
5285 5770 0.873743 GTAGCTGCCGCTCATGAGTC 60.874 60.000 23.38 14.51 45.15 3.36
5286 5771 1.142748 GTAGCTGCCGCTCATGAGT 59.857 57.895 23.38 4.85 45.15 3.41
5287 5772 0.249784 ATGTAGCTGCCGCTCATGAG 60.250 55.000 18.84 18.84 45.15 2.90
5288 5773 0.178767 AATGTAGCTGCCGCTCATGA 59.821 50.000 5.68 0.00 45.15 3.07
5289 5774 0.306840 CAATGTAGCTGCCGCTCATG 59.693 55.000 5.68 0.00 45.15 3.07
5290 5775 0.107508 ACAATGTAGCTGCCGCTCAT 60.108 50.000 5.68 7.50 45.15 2.90
5291 5776 0.321564 AACAATGTAGCTGCCGCTCA 60.322 50.000 5.68 5.34 45.15 4.26
5292 5777 0.375106 GAACAATGTAGCTGCCGCTC 59.625 55.000 5.68 0.00 45.15 5.03
5294 5779 1.429423 GGAACAATGTAGCTGCCGC 59.571 57.895 0.00 0.00 0.00 6.53
5295 5780 0.392998 AGGGAACAATGTAGCTGCCG 60.393 55.000 0.00 0.00 0.00 5.69
5296 5781 1.383523 GAGGGAACAATGTAGCTGCC 58.616 55.000 0.00 0.00 0.00 4.85
5297 5782 1.009829 CGAGGGAACAATGTAGCTGC 58.990 55.000 0.00 0.00 0.00 5.25
5298 5783 1.066143 ACCGAGGGAACAATGTAGCTG 60.066 52.381 0.00 0.00 0.00 4.24
5299 5784 1.276622 ACCGAGGGAACAATGTAGCT 58.723 50.000 0.00 0.00 0.00 3.32
5300 5785 2.007608 GAACCGAGGGAACAATGTAGC 58.992 52.381 0.00 0.00 0.00 3.58
5301 5786 2.268298 CGAACCGAGGGAACAATGTAG 58.732 52.381 0.00 0.00 0.00 2.74
5302 5787 1.619827 ACGAACCGAGGGAACAATGTA 59.380 47.619 0.00 0.00 0.00 2.29
5303 5788 0.395312 ACGAACCGAGGGAACAATGT 59.605 50.000 0.00 0.00 0.00 2.71
5304 5789 2.268298 CTACGAACCGAGGGAACAATG 58.732 52.381 0.00 0.00 0.00 2.82
5305 5790 1.897802 ACTACGAACCGAGGGAACAAT 59.102 47.619 0.00 0.00 0.00 2.71
5306 5791 1.000060 CACTACGAACCGAGGGAACAA 60.000 52.381 0.00 0.00 0.00 2.83
5307 5792 0.599558 CACTACGAACCGAGGGAACA 59.400 55.000 0.00 0.00 0.00 3.18
5308 5793 0.600057 ACACTACGAACCGAGGGAAC 59.400 55.000 0.00 0.00 0.00 3.62
5309 5794 1.000060 CAACACTACGAACCGAGGGAA 60.000 52.381 0.00 0.00 0.00 3.97
5310 5795 0.599558 CAACACTACGAACCGAGGGA 59.400 55.000 0.00 0.00 0.00 4.20
5311 5796 1.012486 GCAACACTACGAACCGAGGG 61.012 60.000 0.00 0.00 0.00 4.30
5312 5797 1.012486 GGCAACACTACGAACCGAGG 61.012 60.000 0.00 0.00 0.00 4.63
5313 5798 1.342082 CGGCAACACTACGAACCGAG 61.342 60.000 0.00 0.00 43.19 4.63
5314 5799 1.372004 CGGCAACACTACGAACCGA 60.372 57.895 0.00 0.00 43.19 4.69
5315 5800 3.007070 GCGGCAACACTACGAACCG 62.007 63.158 0.00 0.00 43.37 4.44
5316 5801 1.957186 TGCGGCAACACTACGAACC 60.957 57.895 0.00 0.00 0.00 3.62
5317 5802 1.203313 GTGCGGCAACACTACGAAC 59.797 57.895 3.23 0.00 37.58 3.95
5318 5803 0.601576 ATGTGCGGCAACACTACGAA 60.602 50.000 3.23 0.00 41.30 3.85
5319 5804 0.244178 TATGTGCGGCAACACTACGA 59.756 50.000 3.23 0.00 41.30 3.43
5320 5805 0.645355 CTATGTGCGGCAACACTACG 59.355 55.000 3.23 0.00 41.30 3.51
5321 5806 1.659098 GACTATGTGCGGCAACACTAC 59.341 52.381 3.23 0.00 41.30 2.73
5322 5807 1.548719 AGACTATGTGCGGCAACACTA 59.451 47.619 3.23 0.00 41.30 2.74
5323 5808 0.321671 AGACTATGTGCGGCAACACT 59.678 50.000 3.23 0.00 41.30 3.55
5324 5809 1.659098 GTAGACTATGTGCGGCAACAC 59.341 52.381 3.23 1.59 41.10 3.32
5325 5810 1.273886 TGTAGACTATGTGCGGCAACA 59.726 47.619 3.23 5.96 0.00 3.33
5326 5811 2.004583 TGTAGACTATGTGCGGCAAC 57.995 50.000 3.23 0.00 0.00 4.17
5327 5812 2.979814 ATGTAGACTATGTGCGGCAA 57.020 45.000 3.23 0.00 0.00 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.