Multiple sequence alignment - TraesCS3A01G341100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G341100 chr3A 100.000 7045 0 0 1 7045 588645392 588638348 0.000000e+00 13010.0
1 TraesCS3A01G341100 chr3A 96.811 439 13 1 1 438 401591694 401592132 0.000000e+00 732.0
2 TraesCS3A01G341100 chr3A 95.652 46 2 0 4123 4168 599863904 599863859 2.730000e-09 75.0
3 TraesCS3A01G341100 chr3D 96.078 5610 137 33 936 6518 446853070 446847517 0.000000e+00 9064.0
4 TraesCS3A01G341100 chr3D 88.559 236 9 10 709 934 446853360 446853133 3.240000e-68 270.0
5 TraesCS3A01G341100 chr3D 92.562 121 9 0 582 702 446853532 446853412 2.610000e-39 174.0
6 TraesCS3A01G341100 chr3D 97.727 44 1 0 4123 4166 46124322 46124365 7.580000e-10 76.8
7 TraesCS3A01G341100 chr3D 95.556 45 2 0 4124 4168 31728080 31728124 9.800000e-09 73.1
8 TraesCS3A01G341100 chr3B 92.800 2014 90 20 4194 6200 586153997 586152032 0.000000e+00 2865.0
9 TraesCS3A01G341100 chr3B 95.010 1563 59 12 1560 3105 586156245 586154685 0.000000e+00 2436.0
10 TraesCS3A01G341100 chr3B 94.629 633 18 7 932 1563 586158010 586157393 0.000000e+00 966.0
11 TraesCS3A01G341100 chr3B 86.145 664 46 26 3505 4127 586154652 586153994 0.000000e+00 675.0
12 TraesCS3A01G341100 chr3B 88.868 521 52 2 6519 7033 567988799 567989319 2.770000e-178 636.0
13 TraesCS3A01G341100 chr5A 94.334 706 37 3 2141 2844 325198012 325197308 0.000000e+00 1079.0
14 TraesCS3A01G341100 chr5A 96.811 439 13 1 1 438 451663797 451664235 0.000000e+00 732.0
15 TraesCS3A01G341100 chr5A 96.163 443 15 2 1 442 411352719 411353160 0.000000e+00 723.0
16 TraesCS3A01G341100 chr5A 94.268 471 18 8 4 469 167306276 167305810 0.000000e+00 712.0
17 TraesCS3A01G341100 chr2A 96.811 439 12 2 1 438 569134177 569134614 0.000000e+00 732.0
18 TraesCS3A01G341100 chr4A 96.583 439 13 2 1 438 421429380 421428943 0.000000e+00 726.0
19 TraesCS3A01G341100 chr4A 96.796 437 11 3 4 438 430032135 430031700 0.000000e+00 726.0
20 TraesCS3A01G341100 chr4A 88.417 518 55 4 6520 7033 284674862 284675378 2.790000e-173 619.0
21 TraesCS3A01G341100 chr4A 88.337 523 52 4 6519 7034 544260206 544260726 2.790000e-173 619.0
22 TraesCS3A01G341100 chr4A 94.118 51 2 1 4119 4168 626981484 626981534 7.580000e-10 76.8
23 TraesCS3A01G341100 chr4A 96.970 33 1 0 4172 4204 21221505 21221537 1.000000e-03 56.5
24 TraesCS3A01G341100 chr1A 96.789 436 13 1 4 438 430063618 430063183 0.000000e+00 726.0
25 TraesCS3A01G341100 chr1A 96.583 439 14 1 1 438 498771581 498772019 0.000000e+00 726.0
26 TraesCS3A01G341100 chr1A 77.483 604 103 24 2202 2791 497074317 497074901 1.460000e-86 331.0
27 TraesCS3A01G341100 chr2B 88.910 523 51 3 6518 7033 102379904 102379382 7.710000e-179 638.0
28 TraesCS3A01G341100 chr2B 91.667 72 2 1 4126 4197 286977103 286977170 5.820000e-16 97.1
29 TraesCS3A01G341100 chr7D 88.411 535 47 9 6519 7045 593963104 593962577 1.290000e-176 630.0
30 TraesCS3A01G341100 chr7D 88.292 521 50 6 6521 7033 410499138 410499655 1.300000e-171 614.0
31 TraesCS3A01G341100 chr5B 88.697 522 52 4 6519 7033 247140945 247141466 1.290000e-176 630.0
32 TraesCS3A01G341100 chr5B 87.931 522 57 4 6519 7034 322745577 322746098 1.680000e-170 610.0
33 TraesCS3A01G341100 chr7A 88.676 521 50 6 6521 7033 512291745 512292264 1.670000e-175 627.0
34 TraesCS3A01G341100 chr1B 76.833 600 111 22 2202 2791 537692556 537693137 5.310000e-81 313.0
35 TraesCS3A01G341100 chr1D 76.628 599 114 21 2202 2791 400778743 400779324 2.470000e-79 307.0
36 TraesCS3A01G341100 chr1D 92.000 50 4 0 4120 4169 467752394 467752345 3.530000e-08 71.3
37 TraesCS3A01G341100 chr6A 95.556 135 6 0 437 571 517547061 517547195 4.280000e-52 217.0
38 TraesCS3A01G341100 chr6B 85.714 133 11 5 437 569 562237549 562237673 4.430000e-27 134.0
39 TraesCS3A01G341100 chr7B 84.615 91 6 6 4119 4203 146008580 146008668 4.530000e-12 84.2
40 TraesCS3A01G341100 chr2D 97.826 46 1 0 4123 4168 484046247 484046292 5.860000e-11 80.5
41 TraesCS3A01G341100 chr2D 97.143 35 1 0 4164 4198 299527195 299527161 7.630000e-05 60.2
42 TraesCS3A01G341100 chr5D 80.682 88 8 5 4126 4204 6109751 6109664 7.630000e-05 60.2
43 TraesCS3A01G341100 chr4D 92.683 41 3 0 4164 4204 47343858 47343818 7.630000e-05 60.2
44 TraesCS3A01G341100 chr6D 97.059 34 1 0 4164 4197 451104828 451104861 2.740000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G341100 chr3A 588638348 588645392 7044 True 13010.000000 13010 100.000000 1 7045 1 chr3A.!!$R1 7044
1 TraesCS3A01G341100 chr3D 446847517 446853532 6015 True 3169.333333 9064 92.399667 582 6518 3 chr3D.!!$R1 5936
2 TraesCS3A01G341100 chr3B 586152032 586158010 5978 True 1735.500000 2865 92.146000 932 6200 4 chr3B.!!$R1 5268
3 TraesCS3A01G341100 chr3B 567988799 567989319 520 False 636.000000 636 88.868000 6519 7033 1 chr3B.!!$F1 514
4 TraesCS3A01G341100 chr5A 325197308 325198012 704 True 1079.000000 1079 94.334000 2141 2844 1 chr5A.!!$R2 703
5 TraesCS3A01G341100 chr4A 284674862 284675378 516 False 619.000000 619 88.417000 6520 7033 1 chr4A.!!$F2 513
6 TraesCS3A01G341100 chr4A 544260206 544260726 520 False 619.000000 619 88.337000 6519 7034 1 chr4A.!!$F3 515
7 TraesCS3A01G341100 chr1A 497074317 497074901 584 False 331.000000 331 77.483000 2202 2791 1 chr1A.!!$F1 589
8 TraesCS3A01G341100 chr2B 102379382 102379904 522 True 638.000000 638 88.910000 6518 7033 1 chr2B.!!$R1 515
9 TraesCS3A01G341100 chr7D 593962577 593963104 527 True 630.000000 630 88.411000 6519 7045 1 chr7D.!!$R1 526
10 TraesCS3A01G341100 chr7D 410499138 410499655 517 False 614.000000 614 88.292000 6521 7033 1 chr7D.!!$F1 512
11 TraesCS3A01G341100 chr5B 247140945 247141466 521 False 630.000000 630 88.697000 6519 7033 1 chr5B.!!$F1 514
12 TraesCS3A01G341100 chr5B 322745577 322746098 521 False 610.000000 610 87.931000 6519 7034 1 chr5B.!!$F2 515
13 TraesCS3A01G341100 chr7A 512291745 512292264 519 False 627.000000 627 88.676000 6521 7033 1 chr7A.!!$F1 512
14 TraesCS3A01G341100 chr1B 537692556 537693137 581 False 313.000000 313 76.833000 2202 2791 1 chr1B.!!$F1 589
15 TraesCS3A01G341100 chr1D 400778743 400779324 581 False 307.000000 307 76.628000 2202 2791 1 chr1D.!!$F1 589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 344 0.034337 GTGGGTCCTTGAGTTGCGTA 59.966 55.000 0.00 0.0 0.00 4.42 F
495 496 0.036164 ACACCGGTATGCAGCAAAGA 59.964 50.000 6.87 0.0 0.00 2.52 F
934 990 0.037697 TCGGCAGTTTGATAGCACGT 60.038 50.000 0.00 0.0 0.00 4.49 F
1421 1538 0.253044 GCAACATCCAGCTCCAGGTA 59.747 55.000 0.00 0.0 0.00 3.08 F
1696 2977 0.385390 CGCCAGCTTCACTTTTGGTT 59.615 50.000 0.00 0.0 33.21 3.67 F
1821 3102 1.003003 TCCAATGTGTCGATGCCTTGA 59.997 47.619 0.00 0.0 0.00 3.02 F
2130 3414 1.400242 GCGAGTGTTGAATTGCCTGAC 60.400 52.381 0.00 0.0 0.00 3.51 F
3132 4455 2.094752 CACCCCTTTACGCTCAATTTGG 60.095 50.000 0.00 0.0 0.00 3.28 F
4097 5460 1.506493 CGATGCCAGCATTACCTCTC 58.494 55.000 6.57 0.0 36.70 3.20 F
5476 6848 0.590481 CATGTTGATGGATGCGCACG 60.590 55.000 14.90 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2109 3393 0.877071 CAGGCAATTCAACACTCGCT 59.123 50.000 0.00 0.00 0.00 4.93 R
2130 3414 1.802960 GTCACTGGCAGATTCACACTG 59.197 52.381 23.66 6.31 38.27 3.66 R
2153 3437 4.550076 AGAATCCTAGATAGCATGTGGC 57.450 45.455 0.00 0.00 45.30 5.01 R
3272 4596 0.038343 GCCATTGTTTGCCATCACGT 60.038 50.000 0.00 0.00 0.00 4.49 R
3295 4619 0.314302 GTGCAGTCACTACGTGGACT 59.686 55.000 5.70 9.65 40.03 3.85 R
3369 4693 5.885465 AGAGGAGAAACATTGGAACAGAAT 58.115 37.500 0.00 0.00 42.39 2.40 R
3832 5192 2.036604 TCGTGGCTTGTAGTGACAATCA 59.963 45.455 0.00 0.00 44.53 2.57 R
4953 6324 1.179152 TGCAATCAGGATGCCACAAG 58.821 50.000 0.00 0.00 43.16 3.16 R
5651 7031 0.252148 TCTTGGCCATGCATTTCCCA 60.252 50.000 6.09 0.46 0.00 4.37 R
6738 8129 0.242555 ACCAAAAATACCTTGCCGCG 59.757 50.000 0.00 0.00 0.00 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.917129 AAATTCCGAAATAAATTTTTACGGACT 57.083 25.926 20.25 15.60 45.60 3.85
33 34 9.917129 AATTCCGAAATAAATTTTTACGGACTT 57.083 25.926 20.25 18.67 45.60 3.01
34 35 8.953507 TTCCGAAATAAATTTTTACGGACTTC 57.046 30.769 20.25 4.74 45.60 3.01
35 36 8.326680 TCCGAAATAAATTTTTACGGACTTCT 57.673 30.769 18.20 0.00 42.14 2.85
36 37 9.434420 TCCGAAATAAATTTTTACGGACTTCTA 57.566 29.630 18.20 4.22 42.14 2.10
45 46 8.965986 ATTTTTACGGACTTCTAAAATCAAGC 57.034 30.769 0.00 0.00 0.00 4.01
46 47 6.490566 TTTACGGACTTCTAAAATCAAGCC 57.509 37.500 0.00 0.00 0.00 4.35
47 48 3.000727 ACGGACTTCTAAAATCAAGCCG 58.999 45.455 0.00 0.00 41.29 5.52
48 49 2.223044 CGGACTTCTAAAATCAAGCCGC 60.223 50.000 0.00 0.00 34.69 6.53
49 50 2.747446 GGACTTCTAAAATCAAGCCGCA 59.253 45.455 0.00 0.00 0.00 5.69
50 51 3.426292 GGACTTCTAAAATCAAGCCGCAC 60.426 47.826 0.00 0.00 0.00 5.34
51 52 3.146066 ACTTCTAAAATCAAGCCGCACA 58.854 40.909 0.00 0.00 0.00 4.57
52 53 3.568007 ACTTCTAAAATCAAGCCGCACAA 59.432 39.130 0.00 0.00 0.00 3.33
53 54 3.829886 TCTAAAATCAAGCCGCACAAG 57.170 42.857 0.00 0.00 0.00 3.16
54 55 3.146066 TCTAAAATCAAGCCGCACAAGT 58.854 40.909 0.00 0.00 0.00 3.16
55 56 2.888834 AAAATCAAGCCGCACAAGTT 57.111 40.000 0.00 0.00 0.00 2.66
56 57 2.138596 AAATCAAGCCGCACAAGTTG 57.861 45.000 0.00 0.00 0.00 3.16
57 58 1.317613 AATCAAGCCGCACAAGTTGA 58.682 45.000 10.54 0.00 33.61 3.18
58 59 1.317613 ATCAAGCCGCACAAGTTGAA 58.682 45.000 10.54 0.00 32.85 2.69
59 60 0.380378 TCAAGCCGCACAAGTTGAAC 59.620 50.000 10.54 0.00 0.00 3.18
60 61 0.100325 CAAGCCGCACAAGTTGAACA 59.900 50.000 10.54 0.00 0.00 3.18
61 62 1.032014 AAGCCGCACAAGTTGAACAT 58.968 45.000 10.54 0.00 0.00 2.71
62 63 1.032014 AGCCGCACAAGTTGAACATT 58.968 45.000 10.54 0.00 0.00 2.71
63 64 1.408702 AGCCGCACAAGTTGAACATTT 59.591 42.857 10.54 0.00 0.00 2.32
64 65 2.621055 AGCCGCACAAGTTGAACATTTA 59.379 40.909 10.54 0.00 0.00 1.40
65 66 3.255642 AGCCGCACAAGTTGAACATTTAT 59.744 39.130 10.54 0.00 0.00 1.40
66 67 3.987220 GCCGCACAAGTTGAACATTTATT 59.013 39.130 10.54 0.00 0.00 1.40
67 68 4.447389 GCCGCACAAGTTGAACATTTATTT 59.553 37.500 10.54 0.00 0.00 1.40
68 69 5.612276 GCCGCACAAGTTGAACATTTATTTG 60.612 40.000 10.54 0.00 0.00 2.32
69 70 5.107530 CCGCACAAGTTGAACATTTATTTGG 60.108 40.000 10.54 0.00 0.00 3.28
70 71 5.107530 CGCACAAGTTGAACATTTATTTGGG 60.108 40.000 10.54 0.00 0.00 4.12
71 72 5.988561 GCACAAGTTGAACATTTATTTGGGA 59.011 36.000 10.54 0.00 0.00 4.37
72 73 6.073819 GCACAAGTTGAACATTTATTTGGGAC 60.074 38.462 10.54 0.00 0.00 4.46
73 74 6.423604 CACAAGTTGAACATTTATTTGGGACC 59.576 38.462 10.54 0.00 0.00 4.46
74 75 6.326323 ACAAGTTGAACATTTATTTGGGACCT 59.674 34.615 10.54 0.00 0.00 3.85
75 76 7.507616 ACAAGTTGAACATTTATTTGGGACCTA 59.492 33.333 10.54 0.00 0.00 3.08
76 77 8.364142 CAAGTTGAACATTTATTTGGGACCTAA 58.636 33.333 0.00 0.00 0.00 2.69
77 78 8.485578 AGTTGAACATTTATTTGGGACCTAAA 57.514 30.769 5.38 5.38 0.00 1.85
78 79 9.100197 AGTTGAACATTTATTTGGGACCTAAAT 57.900 29.630 18.62 18.62 0.00 1.40
79 80 9.150348 GTTGAACATTTATTTGGGACCTAAATG 57.850 33.333 22.40 19.20 43.53 2.32
80 81 7.327214 TGAACATTTATTTGGGACCTAAATGC 58.673 34.615 22.40 9.22 42.50 3.56
81 82 6.865834 ACATTTATTTGGGACCTAAATGCA 57.134 33.333 22.40 11.18 42.50 3.96
82 83 7.251321 ACATTTATTTGGGACCTAAATGCAA 57.749 32.000 22.40 15.81 42.50 4.08
83 84 7.860584 ACATTTATTTGGGACCTAAATGCAAT 58.139 30.769 22.40 17.04 42.50 3.56
84 85 8.328014 ACATTTATTTGGGACCTAAATGCAATT 58.672 29.630 22.40 6.70 42.50 2.32
86 87 9.752228 ATTTATTTGGGACCTAAATGCAATTTT 57.248 25.926 22.40 0.79 46.10 1.82
87 88 8.558973 TTATTTGGGACCTAAATGCAATTTTG 57.441 30.769 22.40 0.00 46.10 2.44
88 89 5.815233 TTGGGACCTAAATGCAATTTTGA 57.185 34.783 0.00 0.00 46.10 2.69
89 90 5.815233 TGGGACCTAAATGCAATTTTGAA 57.185 34.783 0.00 0.00 46.10 2.69
90 91 6.179906 TGGGACCTAAATGCAATTTTGAAA 57.820 33.333 0.00 0.00 46.10 2.69
91 92 6.595682 TGGGACCTAAATGCAATTTTGAAAA 58.404 32.000 0.00 0.00 46.10 2.29
92 93 7.056635 TGGGACCTAAATGCAATTTTGAAAAA 58.943 30.769 0.00 0.00 46.10 1.94
93 94 7.012799 TGGGACCTAAATGCAATTTTGAAAAAC 59.987 33.333 0.00 0.00 46.10 2.43
94 95 7.068955 GGACCTAAATGCAATTTTGAAAAACG 58.931 34.615 0.00 0.00 46.10 3.60
95 96 6.426327 ACCTAAATGCAATTTTGAAAAACGC 58.574 32.000 7.47 7.47 46.10 4.84
96 97 6.037610 ACCTAAATGCAATTTTGAAAAACGCA 59.962 30.769 16.27 16.27 46.10 5.24
97 98 6.356714 CCTAAATGCAATTTTGAAAAACGCAC 59.643 34.615 16.27 0.00 46.10 5.34
98 99 4.871993 ATGCAATTTTGAAAAACGCACA 57.128 31.818 16.27 3.06 40.34 4.57
99 100 4.871993 TGCAATTTTGAAAAACGCACAT 57.128 31.818 11.71 0.00 35.78 3.21
100 101 5.227238 TGCAATTTTGAAAAACGCACATT 57.773 30.435 11.71 0.00 35.78 2.71
101 102 5.634896 TGCAATTTTGAAAAACGCACATTT 58.365 29.167 11.71 0.00 35.78 2.32
102 103 6.088824 TGCAATTTTGAAAAACGCACATTTT 58.911 28.000 11.71 0.00 35.78 1.82
103 104 6.583806 TGCAATTTTGAAAAACGCACATTTTT 59.416 26.923 11.71 3.45 42.94 1.94
112 113 8.693948 GAAAAACGCACATTTTTCCTAAATTC 57.306 30.769 14.97 0.00 46.17 2.17
113 114 7.778470 AAAACGCACATTTTTCCTAAATTCA 57.222 28.000 0.00 0.00 0.00 2.57
114 115 7.778470 AAACGCACATTTTTCCTAAATTCAA 57.222 28.000 0.00 0.00 0.00 2.69
115 116 7.778470 AACGCACATTTTTCCTAAATTCAAA 57.222 28.000 0.00 0.00 0.00 2.69
116 117 7.961325 ACGCACATTTTTCCTAAATTCAAAT 57.039 28.000 0.00 0.00 0.00 2.32
117 118 9.482627 AACGCACATTTTTCCTAAATTCAAATA 57.517 25.926 0.00 0.00 0.00 1.40
118 119 9.482627 ACGCACATTTTTCCTAAATTCAAATAA 57.517 25.926 0.00 0.00 0.00 1.40
134 135 9.594478 AATTCAAATAAAACACCGAAAAACTCT 57.406 25.926 0.00 0.00 0.00 3.24
135 136 7.979115 TCAAATAAAACACCGAAAAACTCTG 57.021 32.000 0.00 0.00 0.00 3.35
136 137 7.763356 TCAAATAAAACACCGAAAAACTCTGA 58.237 30.769 0.00 0.00 0.00 3.27
137 138 8.244802 TCAAATAAAACACCGAAAAACTCTGAA 58.755 29.630 0.00 0.00 0.00 3.02
138 139 8.865001 CAAATAAAACACCGAAAAACTCTGAAA 58.135 29.630 0.00 0.00 0.00 2.69
139 140 9.594478 AAATAAAACACCGAAAAACTCTGAAAT 57.406 25.926 0.00 0.00 0.00 2.17
142 143 8.989653 AAAACACCGAAAAACTCTGAAATAAA 57.010 26.923 0.00 0.00 0.00 1.40
143 144 8.989653 AAACACCGAAAAACTCTGAAATAAAA 57.010 26.923 0.00 0.00 0.00 1.52
144 145 9.594478 AAACACCGAAAAACTCTGAAATAAAAT 57.406 25.926 0.00 0.00 0.00 1.82
145 146 8.797266 ACACCGAAAAACTCTGAAATAAAATC 57.203 30.769 0.00 0.00 0.00 2.17
146 147 8.630037 ACACCGAAAAACTCTGAAATAAAATCT 58.370 29.630 0.00 0.00 0.00 2.40
147 148 9.463443 CACCGAAAAACTCTGAAATAAAATCTT 57.537 29.630 0.00 0.00 0.00 2.40
209 210 8.491045 TTTTGGGAAACTCATTTTATTCCTCT 57.509 30.769 3.67 0.00 40.90 3.69
210 211 7.703058 TTGGGAAACTCATTTTATTCCTCTC 57.297 36.000 3.67 0.00 40.90 3.20
211 212 7.032598 TGGGAAACTCATTTTATTCCTCTCT 57.967 36.000 3.67 0.00 40.90 3.10
212 213 7.112779 TGGGAAACTCATTTTATTCCTCTCTC 58.887 38.462 3.67 0.00 40.90 3.20
213 214 7.112779 GGGAAACTCATTTTATTCCTCTCTCA 58.887 38.462 3.67 0.00 40.90 3.27
214 215 7.777440 GGGAAACTCATTTTATTCCTCTCTCAT 59.223 37.037 3.67 0.00 40.90 2.90
215 216 9.838339 GGAAACTCATTTTATTCCTCTCTCATA 57.162 33.333 0.00 0.00 38.61 2.15
321 322 7.761038 AAAATAACGAAATTCCCAACTCTCT 57.239 32.000 0.00 0.00 0.00 3.10
322 323 6.743575 AATAACGAAATTCCCAACTCTCTG 57.256 37.500 0.00 0.00 0.00 3.35
323 324 2.427506 ACGAAATTCCCAACTCTCTGC 58.572 47.619 0.00 0.00 0.00 4.26
324 325 1.394917 CGAAATTCCCAACTCTCTGCG 59.605 52.381 0.00 0.00 0.00 5.18
325 326 2.427506 GAAATTCCCAACTCTCTGCGT 58.572 47.619 0.00 0.00 0.00 5.24
326 327 1.813513 AATTCCCAACTCTCTGCGTG 58.186 50.000 0.00 0.00 0.00 5.34
327 328 0.036010 ATTCCCAACTCTCTGCGTGG 60.036 55.000 0.00 0.00 0.00 4.94
328 329 2.046892 CCCAACTCTCTGCGTGGG 60.047 66.667 0.00 0.00 0.00 4.61
329 330 2.743718 CCAACTCTCTGCGTGGGT 59.256 61.111 0.00 0.00 0.00 4.51
330 331 1.374758 CCAACTCTCTGCGTGGGTC 60.375 63.158 0.00 0.00 0.00 4.46
331 332 1.374758 CAACTCTCTGCGTGGGTCC 60.375 63.158 0.00 0.00 0.00 4.46
332 333 1.534235 AACTCTCTGCGTGGGTCCT 60.534 57.895 0.00 0.00 0.00 3.85
333 334 1.122019 AACTCTCTGCGTGGGTCCTT 61.122 55.000 0.00 0.00 0.00 3.36
334 335 1.079543 CTCTCTGCGTGGGTCCTTG 60.080 63.158 0.00 0.00 0.00 3.61
335 336 1.533033 TCTCTGCGTGGGTCCTTGA 60.533 57.895 0.00 0.00 0.00 3.02
336 337 1.079543 CTCTGCGTGGGTCCTTGAG 60.080 63.158 0.00 0.00 0.00 3.02
337 338 1.821061 CTCTGCGTGGGTCCTTGAGT 61.821 60.000 0.00 0.00 0.00 3.41
338 339 1.071471 CTGCGTGGGTCCTTGAGTT 59.929 57.895 0.00 0.00 0.00 3.01
339 340 1.227823 TGCGTGGGTCCTTGAGTTG 60.228 57.895 0.00 0.00 0.00 3.16
340 341 2.617274 GCGTGGGTCCTTGAGTTGC 61.617 63.158 0.00 0.00 0.00 4.17
341 342 2.317609 CGTGGGTCCTTGAGTTGCG 61.318 63.158 0.00 0.00 0.00 4.85
342 343 1.227853 GTGGGTCCTTGAGTTGCGT 60.228 57.895 0.00 0.00 0.00 5.24
343 344 0.034337 GTGGGTCCTTGAGTTGCGTA 59.966 55.000 0.00 0.00 0.00 4.42
344 345 0.320374 TGGGTCCTTGAGTTGCGTAG 59.680 55.000 0.00 0.00 0.00 3.51
345 346 0.606604 GGGTCCTTGAGTTGCGTAGA 59.393 55.000 0.00 0.00 0.00 2.59
346 347 1.001633 GGGTCCTTGAGTTGCGTAGAA 59.998 52.381 0.00 0.00 0.00 2.10
347 348 2.354805 GGGTCCTTGAGTTGCGTAGAAT 60.355 50.000 0.00 0.00 0.00 2.40
348 349 3.335579 GGTCCTTGAGTTGCGTAGAATT 58.664 45.455 0.00 0.00 0.00 2.17
349 350 3.751698 GGTCCTTGAGTTGCGTAGAATTT 59.248 43.478 0.00 0.00 0.00 1.82
350 351 4.142881 GGTCCTTGAGTTGCGTAGAATTTC 60.143 45.833 0.00 0.00 0.00 2.17
351 352 4.691216 GTCCTTGAGTTGCGTAGAATTTCT 59.309 41.667 4.03 4.03 0.00 2.52
352 353 5.867716 GTCCTTGAGTTGCGTAGAATTTCTA 59.132 40.000 1.90 1.90 0.00 2.10
353 354 6.035112 GTCCTTGAGTTGCGTAGAATTTCTAG 59.965 42.308 6.37 3.18 28.01 2.43
354 355 5.292101 CCTTGAGTTGCGTAGAATTTCTAGG 59.708 44.000 17.73 17.73 37.76 3.02
355 356 5.654603 TGAGTTGCGTAGAATTTCTAGGA 57.345 39.130 23.59 10.26 37.10 2.94
356 357 6.222038 TGAGTTGCGTAGAATTTCTAGGAT 57.778 37.500 23.59 10.22 37.10 3.24
357 358 6.273825 TGAGTTGCGTAGAATTTCTAGGATC 58.726 40.000 23.59 16.26 37.10 3.36
358 359 6.127451 TGAGTTGCGTAGAATTTCTAGGATCA 60.127 38.462 23.59 17.90 37.10 2.92
359 360 6.640518 AGTTGCGTAGAATTTCTAGGATCAA 58.359 36.000 23.59 17.13 37.10 2.57
360 361 6.535508 AGTTGCGTAGAATTTCTAGGATCAAC 59.464 38.462 23.59 23.86 37.68 3.18
361 362 5.357257 TGCGTAGAATTTCTAGGATCAACC 58.643 41.667 23.59 9.87 37.10 3.77
362 363 5.105106 TGCGTAGAATTTCTAGGATCAACCA 60.105 40.000 23.59 11.77 37.10 3.67
363 364 5.815740 GCGTAGAATTTCTAGGATCAACCAA 59.184 40.000 23.59 0.00 37.10 3.67
364 365 6.315393 GCGTAGAATTTCTAGGATCAACCAAA 59.685 38.462 23.59 0.00 37.10 3.28
365 366 7.148306 GCGTAGAATTTCTAGGATCAACCAAAA 60.148 37.037 23.59 0.00 37.10 2.44
366 367 8.893727 CGTAGAATTTCTAGGATCAACCAAAAT 58.106 33.333 17.32 0.00 37.10 1.82
368 369 7.550712 AGAATTTCTAGGATCAACCAAAATGC 58.449 34.615 0.00 0.00 42.04 3.56
369 370 6.855763 ATTTCTAGGATCAACCAAAATGCA 57.144 33.333 0.00 0.00 42.04 3.96
370 371 6.662865 TTTCTAGGATCAACCAAAATGCAA 57.337 33.333 0.00 0.00 42.04 4.08
371 372 6.662865 TTCTAGGATCAACCAAAATGCAAA 57.337 33.333 0.00 0.00 42.04 3.68
372 373 6.662865 TCTAGGATCAACCAAAATGCAAAA 57.337 33.333 0.00 0.00 42.04 2.44
373 374 7.243604 TCTAGGATCAACCAAAATGCAAAAT 57.756 32.000 0.00 0.00 42.04 1.82
374 375 8.359875 TCTAGGATCAACCAAAATGCAAAATA 57.640 30.769 0.00 0.00 42.04 1.40
375 376 8.811017 TCTAGGATCAACCAAAATGCAAAATAA 58.189 29.630 0.00 0.00 42.04 1.40
376 377 9.434420 CTAGGATCAACCAAAATGCAAAATAAA 57.566 29.630 0.00 0.00 42.04 1.40
377 378 8.688747 AGGATCAACCAAAATGCAAAATAAAA 57.311 26.923 0.00 0.00 42.04 1.52
378 379 9.299465 AGGATCAACCAAAATGCAAAATAAAAT 57.701 25.926 0.00 0.00 42.04 1.82
433 434 9.563748 ACATTCCAAATTGAAAATTTGAGATGT 57.436 25.926 23.18 23.18 40.42 3.06
446 447 9.696917 AAAATTTGAGATGTTACATGAAGTTCC 57.303 29.630 1.24 0.00 0.00 3.62
447 448 6.480524 TTTGAGATGTTACATGAAGTTCCG 57.519 37.500 1.24 0.00 0.00 4.30
448 449 3.932710 TGAGATGTTACATGAAGTTCCGC 59.067 43.478 1.24 0.00 0.00 5.54
449 450 3.270877 AGATGTTACATGAAGTTCCGCC 58.729 45.455 1.24 0.00 0.00 6.13
450 451 2.851263 TGTTACATGAAGTTCCGCCT 57.149 45.000 0.00 0.00 0.00 5.52
451 452 2.695359 TGTTACATGAAGTTCCGCCTC 58.305 47.619 0.00 0.00 0.00 4.70
452 453 2.301870 TGTTACATGAAGTTCCGCCTCT 59.698 45.455 0.00 0.00 0.00 3.69
453 454 3.512329 TGTTACATGAAGTTCCGCCTCTA 59.488 43.478 0.00 0.00 0.00 2.43
454 455 4.020928 TGTTACATGAAGTTCCGCCTCTAA 60.021 41.667 0.00 0.00 0.00 2.10
455 456 3.695830 ACATGAAGTTCCGCCTCTAAA 57.304 42.857 0.00 0.00 0.00 1.85
456 457 3.600388 ACATGAAGTTCCGCCTCTAAAG 58.400 45.455 0.00 0.00 0.00 1.85
457 458 2.094762 TGAAGTTCCGCCTCTAAAGC 57.905 50.000 0.00 0.00 0.00 3.51
458 459 1.346395 TGAAGTTCCGCCTCTAAAGCA 59.654 47.619 0.00 0.00 0.00 3.91
459 460 2.027192 TGAAGTTCCGCCTCTAAAGCAT 60.027 45.455 0.00 0.00 0.00 3.79
460 461 2.317530 AGTTCCGCCTCTAAAGCATC 57.682 50.000 0.00 0.00 0.00 3.91
461 462 1.555075 AGTTCCGCCTCTAAAGCATCA 59.445 47.619 0.00 0.00 0.00 3.07
462 463 2.171448 AGTTCCGCCTCTAAAGCATCAT 59.829 45.455 0.00 0.00 0.00 2.45
463 464 2.945668 GTTCCGCCTCTAAAGCATCATT 59.054 45.455 0.00 0.00 0.00 2.57
464 465 2.564771 TCCGCCTCTAAAGCATCATTG 58.435 47.619 0.00 0.00 0.00 2.82
482 483 7.620215 CATCATTGCAATTAAATAAACACCGG 58.380 34.615 9.83 0.00 0.00 5.28
483 484 6.692486 TCATTGCAATTAAATAAACACCGGT 58.308 32.000 9.83 0.00 0.00 5.28
484 485 7.827701 TCATTGCAATTAAATAAACACCGGTA 58.172 30.769 6.87 0.00 0.00 4.02
485 486 8.470805 TCATTGCAATTAAATAAACACCGGTAT 58.529 29.630 6.87 0.00 0.00 2.73
486 487 8.538856 CATTGCAATTAAATAAACACCGGTATG 58.461 33.333 6.87 0.00 0.00 2.39
487 488 6.037098 TGCAATTAAATAAACACCGGTATGC 58.963 36.000 6.87 0.00 0.00 3.14
488 489 6.037098 GCAATTAAATAAACACCGGTATGCA 58.963 36.000 6.87 0.00 0.00 3.96
489 490 6.198216 GCAATTAAATAAACACCGGTATGCAG 59.802 38.462 6.87 0.00 0.00 4.41
490 491 3.775661 AAATAAACACCGGTATGCAGC 57.224 42.857 6.87 0.00 0.00 5.25
491 492 2.411628 ATAAACACCGGTATGCAGCA 57.588 45.000 6.87 0.00 0.00 4.41
492 493 2.186532 TAAACACCGGTATGCAGCAA 57.813 45.000 6.87 0.00 0.00 3.91
493 494 1.323412 AAACACCGGTATGCAGCAAA 58.677 45.000 6.87 0.00 0.00 3.68
494 495 0.881118 AACACCGGTATGCAGCAAAG 59.119 50.000 6.87 0.00 0.00 2.77
495 496 0.036164 ACACCGGTATGCAGCAAAGA 59.964 50.000 6.87 0.00 0.00 2.52
496 497 1.340017 ACACCGGTATGCAGCAAAGAT 60.340 47.619 6.87 0.00 0.00 2.40
497 498 1.331756 CACCGGTATGCAGCAAAGATC 59.668 52.381 6.87 0.00 0.00 2.75
498 499 1.065491 ACCGGTATGCAGCAAAGATCA 60.065 47.619 4.49 0.00 0.00 2.92
499 500 2.224606 CCGGTATGCAGCAAAGATCAT 58.775 47.619 0.00 0.00 0.00 2.45
500 501 3.181455 ACCGGTATGCAGCAAAGATCATA 60.181 43.478 4.49 0.00 0.00 2.15
501 502 3.187227 CCGGTATGCAGCAAAGATCATAC 59.813 47.826 0.00 0.00 40.07 2.39
502 503 4.060900 CGGTATGCAGCAAAGATCATACT 58.939 43.478 0.00 0.00 40.42 2.12
503 504 4.151335 CGGTATGCAGCAAAGATCATACTC 59.849 45.833 0.00 0.00 40.42 2.59
504 505 4.453819 GGTATGCAGCAAAGATCATACTCC 59.546 45.833 0.00 0.00 40.42 3.85
505 506 2.923121 TGCAGCAAAGATCATACTCCC 58.077 47.619 0.00 0.00 0.00 4.30
506 507 2.239402 TGCAGCAAAGATCATACTCCCA 59.761 45.455 0.00 0.00 0.00 4.37
507 508 3.117776 TGCAGCAAAGATCATACTCCCAT 60.118 43.478 0.00 0.00 0.00 4.00
508 509 3.501445 GCAGCAAAGATCATACTCCCATC 59.499 47.826 0.00 0.00 0.00 3.51
509 510 4.711399 CAGCAAAGATCATACTCCCATCA 58.289 43.478 0.00 0.00 0.00 3.07
510 511 4.514441 CAGCAAAGATCATACTCCCATCAC 59.486 45.833 0.00 0.00 0.00 3.06
511 512 3.496130 GCAAAGATCATACTCCCATCACG 59.504 47.826 0.00 0.00 0.00 4.35
512 513 4.697514 CAAAGATCATACTCCCATCACGT 58.302 43.478 0.00 0.00 0.00 4.49
513 514 4.592485 AAGATCATACTCCCATCACGTC 57.408 45.455 0.00 0.00 0.00 4.34
514 515 3.838565 AGATCATACTCCCATCACGTCT 58.161 45.455 0.00 0.00 0.00 4.18
515 516 4.219115 AGATCATACTCCCATCACGTCTT 58.781 43.478 0.00 0.00 0.00 3.01
516 517 4.279671 AGATCATACTCCCATCACGTCTTC 59.720 45.833 0.00 0.00 0.00 2.87
517 518 3.632333 TCATACTCCCATCACGTCTTCT 58.368 45.455 0.00 0.00 0.00 2.85
518 519 3.381590 TCATACTCCCATCACGTCTTCTG 59.618 47.826 0.00 0.00 0.00 3.02
519 520 1.924731 ACTCCCATCACGTCTTCTGA 58.075 50.000 0.00 0.00 0.00 3.27
520 521 1.821753 ACTCCCATCACGTCTTCTGAG 59.178 52.381 0.00 0.00 0.00 3.35
521 522 2.095461 CTCCCATCACGTCTTCTGAGA 58.905 52.381 0.00 0.00 0.00 3.27
522 523 2.493675 CTCCCATCACGTCTTCTGAGAA 59.506 50.000 0.00 0.00 32.66 2.87
523 524 3.099905 TCCCATCACGTCTTCTGAGAAT 58.900 45.455 0.00 0.00 32.66 2.40
524 525 3.515502 TCCCATCACGTCTTCTGAGAATT 59.484 43.478 0.00 0.00 32.66 2.17
525 526 4.709886 TCCCATCACGTCTTCTGAGAATTA 59.290 41.667 0.00 0.00 32.66 1.40
526 527 5.363868 TCCCATCACGTCTTCTGAGAATTAT 59.636 40.000 0.00 0.00 32.66 1.28
527 528 6.549736 TCCCATCACGTCTTCTGAGAATTATA 59.450 38.462 0.00 0.00 32.66 0.98
528 529 6.642950 CCCATCACGTCTTCTGAGAATTATAC 59.357 42.308 0.00 0.00 32.66 1.47
529 530 6.642950 CCATCACGTCTTCTGAGAATTATACC 59.357 42.308 0.00 0.00 32.66 2.73
530 531 6.769134 TCACGTCTTCTGAGAATTATACCA 57.231 37.500 0.00 0.00 32.66 3.25
531 532 6.796426 TCACGTCTTCTGAGAATTATACCAG 58.204 40.000 0.00 0.00 32.66 4.00
532 533 5.460419 CACGTCTTCTGAGAATTATACCAGC 59.540 44.000 0.00 0.00 32.66 4.85
533 534 4.985409 CGTCTTCTGAGAATTATACCAGCC 59.015 45.833 0.00 0.00 32.66 4.85
534 535 4.985409 GTCTTCTGAGAATTATACCAGCCG 59.015 45.833 0.00 0.00 32.66 5.52
535 536 3.386768 TCTGAGAATTATACCAGCCGC 57.613 47.619 0.00 0.00 0.00 6.53
536 537 2.037251 TCTGAGAATTATACCAGCCGCC 59.963 50.000 0.00 0.00 0.00 6.13
537 538 1.270094 TGAGAATTATACCAGCCGCCG 60.270 52.381 0.00 0.00 0.00 6.46
538 539 0.756903 AGAATTATACCAGCCGCCGT 59.243 50.000 0.00 0.00 0.00 5.68
539 540 1.140252 AGAATTATACCAGCCGCCGTT 59.860 47.619 0.00 0.00 0.00 4.44
540 541 1.263217 GAATTATACCAGCCGCCGTTG 59.737 52.381 0.00 0.00 0.00 4.10
541 542 0.466543 ATTATACCAGCCGCCGTTGA 59.533 50.000 0.00 0.00 0.00 3.18
542 543 0.249676 TTATACCAGCCGCCGTTGAA 59.750 50.000 0.00 0.00 0.00 2.69
543 544 0.460635 TATACCAGCCGCCGTTGAAC 60.461 55.000 0.00 0.00 0.00 3.18
544 545 3.765660 TATACCAGCCGCCGTTGAACC 62.766 57.143 0.00 0.00 0.00 3.62
546 547 3.055719 CAGCCGCCGTTGAACCAT 61.056 61.111 0.00 0.00 0.00 3.55
547 548 2.746277 AGCCGCCGTTGAACCATC 60.746 61.111 0.00 0.00 0.00 3.51
548 549 3.053291 GCCGCCGTTGAACCATCA 61.053 61.111 0.00 0.00 0.00 3.07
549 550 3.039202 GCCGCCGTTGAACCATCAG 62.039 63.158 0.00 0.00 36.78 2.90
550 551 1.375396 CCGCCGTTGAACCATCAGA 60.375 57.895 0.00 0.00 36.78 3.27
551 552 1.635663 CCGCCGTTGAACCATCAGAC 61.636 60.000 0.00 0.00 36.78 3.51
552 553 0.948623 CGCCGTTGAACCATCAGACA 60.949 55.000 0.00 0.00 36.78 3.41
553 554 1.453155 GCCGTTGAACCATCAGACAT 58.547 50.000 0.00 0.00 36.78 3.06
554 555 1.131126 GCCGTTGAACCATCAGACATG 59.869 52.381 0.00 0.00 36.78 3.21
555 556 1.739466 CCGTTGAACCATCAGACATGG 59.261 52.381 0.00 0.00 44.54 3.66
556 557 2.615240 CCGTTGAACCATCAGACATGGA 60.615 50.000 7.64 0.00 41.64 3.41
557 558 3.073678 CGTTGAACCATCAGACATGGAA 58.926 45.455 7.64 0.00 41.64 3.53
558 559 3.501828 CGTTGAACCATCAGACATGGAAA 59.498 43.478 7.64 0.00 41.64 3.13
559 560 4.023279 CGTTGAACCATCAGACATGGAAAA 60.023 41.667 7.64 0.00 41.64 2.29
560 561 5.222631 GTTGAACCATCAGACATGGAAAAC 58.777 41.667 7.64 5.23 41.64 2.43
561 562 4.468713 TGAACCATCAGACATGGAAAACA 58.531 39.130 7.64 0.15 41.64 2.83
562 563 4.278170 TGAACCATCAGACATGGAAAACAC 59.722 41.667 7.64 0.00 41.64 3.32
563 564 3.157087 ACCATCAGACATGGAAAACACC 58.843 45.455 7.64 0.00 41.64 4.16
564 565 2.493278 CCATCAGACATGGAAAACACCC 59.507 50.000 0.00 0.00 41.64 4.61
565 566 2.286365 TCAGACATGGAAAACACCCC 57.714 50.000 0.00 0.00 0.00 4.95
566 567 1.496857 TCAGACATGGAAAACACCCCA 59.503 47.619 0.00 0.00 36.79 4.96
567 568 2.109834 TCAGACATGGAAAACACCCCAT 59.890 45.455 0.00 0.00 43.51 4.00
568 569 2.493278 CAGACATGGAAAACACCCCATC 59.507 50.000 0.00 0.00 40.95 3.51
569 570 2.109834 AGACATGGAAAACACCCCATCA 59.890 45.455 0.00 0.00 40.95 3.07
570 571 2.896685 GACATGGAAAACACCCCATCAA 59.103 45.455 0.00 0.00 40.95 2.57
571 572 3.312890 ACATGGAAAACACCCCATCAAA 58.687 40.909 0.00 0.00 40.95 2.69
572 573 3.713764 ACATGGAAAACACCCCATCAAAA 59.286 39.130 0.00 0.00 40.95 2.44
573 574 4.202346 ACATGGAAAACACCCCATCAAAAG 60.202 41.667 0.00 0.00 40.95 2.27
574 575 2.703007 TGGAAAACACCCCATCAAAAGG 59.297 45.455 0.00 0.00 0.00 3.11
575 576 2.703536 GGAAAACACCCCATCAAAAGGT 59.296 45.455 0.00 0.00 0.00 3.50
576 577 3.135712 GGAAAACACCCCATCAAAAGGTT 59.864 43.478 0.00 0.00 0.00 3.50
577 578 4.345547 GGAAAACACCCCATCAAAAGGTTA 59.654 41.667 0.00 0.00 0.00 2.85
578 579 5.510690 GGAAAACACCCCATCAAAAGGTTAG 60.511 44.000 0.00 0.00 0.00 2.34
579 580 3.895704 ACACCCCATCAAAAGGTTAGT 57.104 42.857 0.00 0.00 0.00 2.24
580 581 3.496331 ACACCCCATCAAAAGGTTAGTG 58.504 45.455 0.00 0.00 0.00 2.74
586 587 3.511146 CCATCAAAAGGTTAGTGGCACAT 59.489 43.478 21.41 7.59 44.52 3.21
611 612 5.639082 CCATAGTTCAAGAAAATTTGGTGGC 59.361 40.000 0.00 0.00 31.77 5.01
615 616 5.104982 AGTTCAAGAAAATTTGGTGGCAAGA 60.105 36.000 0.00 0.00 0.00 3.02
622 623 6.999871 AGAAAATTTGGTGGCAAGAATCAAAT 59.000 30.769 0.00 0.00 38.99 2.32
626 627 6.855763 TTTGGTGGCAAGAATCAAATATCT 57.144 33.333 0.00 0.00 0.00 1.98
708 709 8.515473 AAAAGCCAAAAACGTATTTCATAGAC 57.485 30.769 0.00 0.00 0.00 2.59
710 711 6.842163 AGCCAAAAACGTATTTCATAGACAG 58.158 36.000 0.00 0.00 0.00 3.51
743 791 8.730970 TTTTTGTAGGCACATACGTAAAAATC 57.269 30.769 0.00 0.00 33.76 2.17
746 794 7.436430 TGTAGGCACATACGTAAAAATCAAA 57.564 32.000 0.00 0.00 0.00 2.69
747 795 8.046294 TGTAGGCACATACGTAAAAATCAAAT 57.954 30.769 0.00 0.00 0.00 2.32
748 796 7.965655 TGTAGGCACATACGTAAAAATCAAATG 59.034 33.333 0.00 0.00 0.00 2.32
749 797 7.151999 AGGCACATACGTAAAAATCAAATGA 57.848 32.000 0.00 0.00 0.00 2.57
750 798 7.771183 AGGCACATACGTAAAAATCAAATGAT 58.229 30.769 0.00 0.00 36.07 2.45
773 821 4.678509 TTTCATATGCTCGTGTGGAAAC 57.321 40.909 0.00 0.00 0.00 2.78
775 823 1.327460 CATATGCTCGTGTGGAAACCG 59.673 52.381 0.00 0.00 0.00 4.44
894 950 0.337773 TGGGGCTCCATTGGCATTTA 59.662 50.000 0.00 0.00 38.32 1.40
930 986 2.346803 TCTGTTCGGCAGTTTGATAGC 58.653 47.619 7.56 0.00 45.23 2.97
934 990 0.037697 TCGGCAGTTTGATAGCACGT 60.038 50.000 0.00 0.00 0.00 4.49
1137 1254 2.944954 AACCCTAACCCCCTGCCC 60.945 66.667 0.00 0.00 0.00 5.36
1421 1538 0.253044 GCAACATCCAGCTCCAGGTA 59.747 55.000 0.00 0.00 0.00 3.08
1508 1625 3.328637 GTGGTGGTTTAGGGTTTAGGAGA 59.671 47.826 0.00 0.00 0.00 3.71
1510 1627 3.054582 GGTGGTTTAGGGTTTAGGAGAGG 60.055 52.174 0.00 0.00 0.00 3.69
1528 1645 6.215636 AGGAGAGGGTTGCTTAAAGATCTTTA 59.784 38.462 21.46 21.46 34.23 1.85
1536 1654 8.902735 GGTTGCTTAAAGATCTTTACTTTTTCG 58.097 33.333 24.34 10.12 38.34 3.46
1543 1661 5.869350 AGATCTTTACTTTTTCGGATTGCG 58.131 37.500 0.00 0.00 0.00 4.85
1603 2873 1.298014 GAGGAGGAACTGTGGCCTG 59.702 63.158 3.32 0.00 41.55 4.85
1636 2906 8.691797 TGCTTAACAGTTAACAGGAGAAAATTT 58.308 29.630 8.61 0.00 0.00 1.82
1670 2951 6.769134 ACTACTTGTTTGTACAGCCTTTTT 57.231 33.333 0.00 0.00 35.28 1.94
1696 2977 0.385390 CGCCAGCTTCACTTTTGGTT 59.615 50.000 0.00 0.00 33.21 3.67
1776 3057 7.952671 GTGTATTGGATGACACTAATAGGAGA 58.047 38.462 0.00 0.00 42.21 3.71
1784 3065 8.871125 GGATGACACTAATAGGAGAAAGGATTA 58.129 37.037 0.00 0.00 0.00 1.75
1789 3070 9.495382 ACACTAATAGGAGAAAGGATTACTTCT 57.505 33.333 0.00 0.00 38.85 2.85
1821 3102 1.003003 TCCAATGTGTCGATGCCTTGA 59.997 47.619 0.00 0.00 0.00 3.02
1864 3145 2.090775 TGGTCTGTATAGGAGGGCATCA 60.091 50.000 0.08 0.00 0.00 3.07
2000 3284 6.371548 TCATGAATAGGTTTCACAAGCTACAC 59.628 38.462 0.00 0.00 44.01 2.90
2109 3393 2.295909 AGTTTTTGGCGCTTAATGCTCA 59.704 40.909 7.64 0.00 40.11 4.26
2130 3414 1.400242 GCGAGTGTTGAATTGCCTGAC 60.400 52.381 0.00 0.00 0.00 3.51
2153 3437 2.161012 GTGTGAATCTGCCAGTGACATG 59.839 50.000 0.00 0.00 0.00 3.21
2627 3949 2.302157 ACACCGCTAGCCTTCTACTTTT 59.698 45.455 9.66 0.00 0.00 2.27
2893 4215 6.827586 ACTTACAAGGTGTTTGACTTGAAA 57.172 33.333 10.95 0.00 45.22 2.69
2967 4289 9.593565 AAAAATCAGGTAAGGAAATCTCTCTTT 57.406 29.630 0.00 0.00 0.00 2.52
3132 4455 2.094752 CACCCCTTTACGCTCAATTTGG 60.095 50.000 0.00 0.00 0.00 3.28
3272 4596 5.753438 GGCAGACATGAGTATCGTAATTCAA 59.247 40.000 0.00 0.00 38.61 2.69
3369 4693 7.445096 CTGGAGACCATATTATATGTGCAACAA 59.555 37.037 10.83 0.00 41.84 2.83
3392 4716 4.982241 TCTGTTCCAATGTTTCTCCTCT 57.018 40.909 0.00 0.00 0.00 3.69
3426 4750 7.284919 TCTCATATATGTTCTAGGACGCAAA 57.715 36.000 12.42 0.00 0.00 3.68
3670 5000 5.784750 TGAGTTATGACTGCTTTGATTCG 57.215 39.130 0.00 0.00 35.88 3.34
3681 5011 4.005650 TGCTTTGATTCGAAATGAGCTCT 58.994 39.130 16.19 0.00 0.00 4.09
3794 5154 6.766467 GGTTATGATAACCGAGGTTTCAAGAT 59.234 38.462 17.75 0.00 39.31 2.40
4097 5460 1.506493 CGATGCCAGCATTACCTCTC 58.494 55.000 6.57 0.00 36.70 3.20
4730 6101 3.568443 TGGCCTGTATTATAGGTCGTGA 58.432 45.455 3.32 0.00 42.90 4.35
4748 6119 5.974751 GTCGTGAGAAATAAAGCAAACCAAA 59.025 36.000 0.00 0.00 45.01 3.28
5010 6381 7.484993 TTACATAACTAGCAACCAAGACCTA 57.515 36.000 0.00 0.00 0.00 3.08
5090 6462 6.524101 ACTTTAAACTTTCTGGTGCTTCAA 57.476 33.333 0.00 0.00 0.00 2.69
5096 6468 3.701040 ACTTTCTGGTGCTTCAACATGTT 59.299 39.130 4.92 4.92 27.67 2.71
5097 6469 3.988379 TTCTGGTGCTTCAACATGTTC 57.012 42.857 8.48 0.00 27.67 3.18
5098 6470 3.213206 TCTGGTGCTTCAACATGTTCT 57.787 42.857 8.48 0.00 27.67 3.01
5099 6471 2.880268 TCTGGTGCTTCAACATGTTCTG 59.120 45.455 8.48 0.00 27.67 3.02
5100 6472 2.620115 CTGGTGCTTCAACATGTTCTGT 59.380 45.455 8.48 0.00 40.84 3.41
5215 6587 4.511454 TGTTAGACTTAGTTGCAAGCACTG 59.489 41.667 0.00 0.00 0.00 3.66
5267 6639 8.456471 GTGTTCCCGAGCTTTTTAGTTTTATAT 58.544 33.333 0.00 0.00 0.00 0.86
5268 6640 9.669887 TGTTCCCGAGCTTTTTAGTTTTATATA 57.330 29.630 0.00 0.00 0.00 0.86
5335 6707 5.763204 TGTGTCACCAAAGTTTTATCTCTCC 59.237 40.000 0.00 0.00 0.00 3.71
5343 6715 8.905850 ACCAAAGTTTTATCTCTCCGTTTTAAA 58.094 29.630 0.00 0.00 0.00 1.52
5349 6721 9.940166 GTTTTATCTCTCCGTTTTAAAAGTCAA 57.060 29.630 0.00 0.00 0.00 3.18
5467 6839 2.163010 GTGTCAGGAAGCATGTTGATGG 59.837 50.000 0.00 0.00 0.00 3.51
5476 6848 0.590481 CATGTTGATGGATGCGCACG 60.590 55.000 14.90 0.00 0.00 5.34
5487 6859 1.305219 ATGCGCACGTTGCCTAATGT 61.305 50.000 14.90 0.00 41.12 2.71
5504 6876 6.511605 GCCTAATGTGCCTTTTTGTTTTGAAG 60.512 38.462 0.00 0.00 0.00 3.02
5508 6880 5.486526 TGTGCCTTTTTGTTTTGAAGTCAT 58.513 33.333 0.00 0.00 0.00 3.06
5624 7004 2.882876 CATCCTTGTGCAGCCTGC 59.117 61.111 10.45 10.45 45.29 4.85
5642 7022 4.564041 CCTGCTCTATAAACATCAGCGAT 58.436 43.478 0.00 0.00 32.43 4.58
5762 7142 5.050023 CGACATCACATCTCTGTACTACGAT 60.050 44.000 0.00 0.00 33.14 3.73
5861 7241 0.921896 AGGCAGGTTACATCAGGCAT 59.078 50.000 0.00 0.00 0.00 4.40
5882 7264 5.262009 CATCAGGGGATCCTCGTTAGTATA 58.738 45.833 12.58 0.00 42.67 1.47
5883 7265 5.531753 TCAGGGGATCCTCGTTAGTATAT 57.468 43.478 12.58 0.00 42.67 0.86
5987 7369 7.224167 GGGAATGTTTGTGTATAGTACTGTAGC 59.776 40.741 5.39 0.21 0.00 3.58
6176 7559 3.012518 CCGATTCTGATTTTGGAGTGCT 58.987 45.455 0.00 0.00 0.00 4.40
6256 7639 2.025887 CCAAAGGTCTACAGAATGCCCT 60.026 50.000 0.00 0.00 42.53 5.19
6263 7646 5.250774 AGGTCTACAGAATGCCCTAAGAAAA 59.749 40.000 0.00 0.00 42.53 2.29
6321 7704 2.668632 CTGCCGCCCAAAGGTCTA 59.331 61.111 0.00 0.00 34.57 2.59
6322 7705 1.002624 CTGCCGCCCAAAGGTCTAA 60.003 57.895 0.00 0.00 34.57 2.10
6327 7710 0.107848 CGCCCAAAGGTCTAATCCGT 60.108 55.000 0.00 0.00 34.57 4.69
6368 7751 2.044650 GATGGCCTTGGCAGCAGA 60.045 61.111 14.04 0.00 43.87 4.26
6391 7774 1.679305 GGAGCGAGGACCTGTCTGA 60.679 63.158 0.00 0.00 0.00 3.27
6426 7809 6.729391 TTTCTTAGGTTTTGTTTTTGTGGC 57.271 33.333 0.00 0.00 0.00 5.01
6436 7819 1.096386 TTTTTGTGGCGGCGTACACT 61.096 50.000 27.51 0.00 38.39 3.55
6444 7827 1.808390 CGGCGTACACTAAGGTGGC 60.808 63.158 0.00 0.00 46.85 5.01
6447 7830 1.808390 CGTACACTAAGGTGGCGGC 60.808 63.158 0.00 0.00 46.85 6.53
6490 7873 0.180642 TCTCTCTGTACCTCGGCGAT 59.819 55.000 11.27 0.00 0.00 4.58
6536 7919 6.444171 AGGGCTTAACAGAGGTAAGTATTTCT 59.556 38.462 4.01 0.00 0.00 2.52
6598 7988 8.402326 TCAAGTAACACTATGTAAATAGCACG 57.598 34.615 0.00 0.00 0.00 5.34
6601 7991 7.318141 AGTAACACTATGTAAATAGCACGTGT 58.682 34.615 18.38 6.65 36.25 4.49
6603 7993 9.241317 GTAACACTATGTAAATAGCACGTGTAT 57.759 33.333 18.38 10.68 34.77 2.29
6641 8031 2.243810 GCAACCCAACATGTAAAGGGA 58.756 47.619 28.20 0.00 44.30 4.20
6806 8200 3.132289 CGGGCCATAGTTTTCACTAGAGA 59.868 47.826 4.39 0.00 38.96 3.10
6853 8247 5.221087 CGGTGGGTAAACAAATTACTGTTGT 60.221 40.000 0.00 0.00 42.93 3.32
6913 8307 7.854557 TCAAGGCAATGATCATGTATATAGC 57.145 36.000 9.46 5.26 0.00 2.97
6926 8320 5.538849 TGTATATAGCCATCACGTCCAAA 57.461 39.130 0.00 0.00 0.00 3.28
6976 8370 9.067986 CATCTACTACTATTACTCCACACATCA 57.932 37.037 0.00 0.00 0.00 3.07
6978 8372 9.642343 TCTACTACTATTACTCCACACATCAAT 57.358 33.333 0.00 0.00 0.00 2.57
7034 8431 7.164230 TGGAAAAACGGAGTAATGCATTAAT 57.836 32.000 20.46 19.54 45.00 1.40
7036 8433 8.402472 TGGAAAAACGGAGTAATGCATTAATAG 58.598 33.333 20.46 17.64 45.00 1.73
7038 8435 6.935741 AAACGGAGTAATGCATTAATAGCA 57.064 33.333 20.46 12.77 45.00 3.49
7040 8437 6.300354 ACGGAGTAATGCATTAATAGCAAC 57.700 37.500 20.46 9.24 43.00 4.17
7042 8439 5.176774 CGGAGTAATGCATTAATAGCAACGA 59.823 40.000 20.46 0.00 46.27 3.85
7043 8440 6.128553 CGGAGTAATGCATTAATAGCAACGAT 60.129 38.462 20.46 0.00 46.27 3.73
7044 8441 7.017645 GGAGTAATGCATTAATAGCAACGATG 58.982 38.462 20.46 0.00 46.27 3.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.917129 AGTCCGTAAAAATTTATTTCGGAATTT 57.083 25.926 22.42 14.54 40.35 1.82
7 8 9.917129 AAGTCCGTAAAAATTTATTTCGGAATT 57.083 25.926 23.61 23.61 40.70 2.17
8 9 9.563898 GAAGTCCGTAAAAATTTATTTCGGAAT 57.436 29.630 22.42 20.43 40.35 3.01
9 10 8.785946 AGAAGTCCGTAAAAATTTATTTCGGAA 58.214 29.630 22.42 12.37 40.35 4.30
10 11 8.326680 AGAAGTCCGTAAAAATTTATTTCGGA 57.673 30.769 19.57 19.57 38.47 4.55
19 20 9.406828 GCTTGATTTTAGAAGTCCGTAAAAATT 57.593 29.630 0.00 0.00 33.12 1.82
20 21 8.027189 GGCTTGATTTTAGAAGTCCGTAAAAAT 58.973 33.333 0.00 0.00 33.12 1.82
21 22 7.364970 GGCTTGATTTTAGAAGTCCGTAAAAA 58.635 34.615 0.00 0.00 33.12 1.94
22 23 6.347888 CGGCTTGATTTTAGAAGTCCGTAAAA 60.348 38.462 0.00 0.00 35.73 1.52
23 24 5.121142 CGGCTTGATTTTAGAAGTCCGTAAA 59.879 40.000 0.00 0.00 35.73 2.01
24 25 4.628333 CGGCTTGATTTTAGAAGTCCGTAA 59.372 41.667 0.00 0.00 35.73 3.18
25 26 4.178540 CGGCTTGATTTTAGAAGTCCGTA 58.821 43.478 0.00 0.00 35.73 4.02
26 27 3.000727 CGGCTTGATTTTAGAAGTCCGT 58.999 45.455 0.00 0.00 35.73 4.69
27 28 2.223044 GCGGCTTGATTTTAGAAGTCCG 60.223 50.000 0.00 0.00 39.64 4.79
28 29 2.747446 TGCGGCTTGATTTTAGAAGTCC 59.253 45.455 0.00 0.00 0.00 3.85
29 30 3.188460 TGTGCGGCTTGATTTTAGAAGTC 59.812 43.478 0.00 0.00 0.00 3.01
30 31 3.146066 TGTGCGGCTTGATTTTAGAAGT 58.854 40.909 0.00 0.00 0.00 3.01
31 32 3.829886 TGTGCGGCTTGATTTTAGAAG 57.170 42.857 0.00 0.00 0.00 2.85
32 33 3.568007 ACTTGTGCGGCTTGATTTTAGAA 59.432 39.130 0.00 0.00 0.00 2.10
33 34 3.146066 ACTTGTGCGGCTTGATTTTAGA 58.854 40.909 0.00 0.00 0.00 2.10
34 35 3.559238 ACTTGTGCGGCTTGATTTTAG 57.441 42.857 0.00 0.00 0.00 1.85
35 36 3.316588 TCAACTTGTGCGGCTTGATTTTA 59.683 39.130 0.00 0.00 0.00 1.52
36 37 2.100584 TCAACTTGTGCGGCTTGATTTT 59.899 40.909 0.00 0.00 0.00 1.82
37 38 1.680735 TCAACTTGTGCGGCTTGATTT 59.319 42.857 0.00 0.00 0.00 2.17
38 39 1.317613 TCAACTTGTGCGGCTTGATT 58.682 45.000 0.00 0.00 0.00 2.57
39 40 1.001378 GTTCAACTTGTGCGGCTTGAT 60.001 47.619 0.00 0.00 0.00 2.57
40 41 0.380378 GTTCAACTTGTGCGGCTTGA 59.620 50.000 0.00 0.00 0.00 3.02
41 42 0.100325 TGTTCAACTTGTGCGGCTTG 59.900 50.000 0.00 0.00 0.00 4.01
42 43 1.032014 ATGTTCAACTTGTGCGGCTT 58.968 45.000 0.00 0.00 0.00 4.35
43 44 1.032014 AATGTTCAACTTGTGCGGCT 58.968 45.000 0.00 0.00 0.00 5.52
44 45 1.851658 AAATGTTCAACTTGTGCGGC 58.148 45.000 0.00 0.00 0.00 6.53
45 46 5.107530 CCAAATAAATGTTCAACTTGTGCGG 60.108 40.000 0.00 0.00 0.00 5.69
46 47 5.107530 CCCAAATAAATGTTCAACTTGTGCG 60.108 40.000 0.00 0.00 0.00 5.34
47 48 5.988561 TCCCAAATAAATGTTCAACTTGTGC 59.011 36.000 0.00 0.00 0.00 4.57
48 49 6.423604 GGTCCCAAATAAATGTTCAACTTGTG 59.576 38.462 0.00 0.00 0.00 3.33
49 50 6.326323 AGGTCCCAAATAAATGTTCAACTTGT 59.674 34.615 0.00 0.00 0.00 3.16
50 51 6.758254 AGGTCCCAAATAAATGTTCAACTTG 58.242 36.000 0.00 0.00 0.00 3.16
51 52 6.994421 AGGTCCCAAATAAATGTTCAACTT 57.006 33.333 0.00 0.00 0.00 2.66
52 53 8.485578 TTTAGGTCCCAAATAAATGTTCAACT 57.514 30.769 0.00 0.00 0.00 3.16
53 54 9.150348 CATTTAGGTCCCAAATAAATGTTCAAC 57.850 33.333 10.92 0.00 39.98 3.18
54 55 7.821846 GCATTTAGGTCCCAAATAAATGTTCAA 59.178 33.333 16.72 0.00 43.75 2.69
55 56 7.038729 TGCATTTAGGTCCCAAATAAATGTTCA 60.039 33.333 16.72 8.91 43.75 3.18
56 57 7.327214 TGCATTTAGGTCCCAAATAAATGTTC 58.673 34.615 16.72 7.22 43.75 3.18
57 58 7.251321 TGCATTTAGGTCCCAAATAAATGTT 57.749 32.000 16.72 0.00 43.75 2.71
58 59 6.865834 TGCATTTAGGTCCCAAATAAATGT 57.134 33.333 16.72 0.00 43.75 2.71
59 60 8.735692 AATTGCATTTAGGTCCCAAATAAATG 57.264 30.769 13.38 13.38 44.27 2.32
60 61 9.752228 AAAATTGCATTTAGGTCCCAAATAAAT 57.248 25.926 0.00 0.00 31.03 1.40
61 62 9.007901 CAAAATTGCATTTAGGTCCCAAATAAA 57.992 29.630 0.00 0.00 0.00 1.40
62 63 8.378565 TCAAAATTGCATTTAGGTCCCAAATAA 58.621 29.630 0.00 0.00 0.00 1.40
63 64 7.911651 TCAAAATTGCATTTAGGTCCCAAATA 58.088 30.769 0.00 0.00 0.00 1.40
64 65 6.777782 TCAAAATTGCATTTAGGTCCCAAAT 58.222 32.000 0.00 0.00 0.00 2.32
65 66 6.179906 TCAAAATTGCATTTAGGTCCCAAA 57.820 33.333 0.00 0.00 0.00 3.28
66 67 5.815233 TCAAAATTGCATTTAGGTCCCAA 57.185 34.783 0.00 0.00 0.00 4.12
67 68 5.815233 TTCAAAATTGCATTTAGGTCCCA 57.185 34.783 0.00 0.00 0.00 4.37
68 69 7.359595 GTTTTTCAAAATTGCATTTAGGTCCC 58.640 34.615 0.00 0.00 0.00 4.46
69 70 7.068955 CGTTTTTCAAAATTGCATTTAGGTCC 58.931 34.615 0.00 0.00 0.00 4.46
70 71 6.573357 GCGTTTTTCAAAATTGCATTTAGGTC 59.427 34.615 0.00 0.00 34.39 3.85
71 72 6.037610 TGCGTTTTTCAAAATTGCATTTAGGT 59.962 30.769 5.64 0.00 37.27 3.08
72 73 6.356714 GTGCGTTTTTCAAAATTGCATTTAGG 59.643 34.615 11.42 0.00 41.11 2.69
73 74 6.904011 TGTGCGTTTTTCAAAATTGCATTTAG 59.096 30.769 11.42 0.00 41.11 1.85
74 75 6.775088 TGTGCGTTTTTCAAAATTGCATTTA 58.225 28.000 11.42 1.91 41.11 1.40
75 76 5.634896 TGTGCGTTTTTCAAAATTGCATTT 58.365 29.167 11.42 0.00 41.11 2.32
76 77 5.227238 TGTGCGTTTTTCAAAATTGCATT 57.773 30.435 11.42 0.00 41.11 3.56
77 78 4.871993 TGTGCGTTTTTCAAAATTGCAT 57.128 31.818 11.42 0.00 41.11 3.96
78 79 4.871993 ATGTGCGTTTTTCAAAATTGCA 57.128 31.818 5.64 5.64 38.73 4.08
79 80 6.551812 AAAATGTGCGTTTTTCAAAATTGC 57.448 29.167 0.96 0.96 34.64 3.56
88 89 8.202745 TGAATTTAGGAAAAATGTGCGTTTTT 57.797 26.923 12.86 12.86 42.29 1.94
89 90 7.778470 TGAATTTAGGAAAAATGTGCGTTTT 57.222 28.000 0.00 0.00 32.94 2.43
90 91 7.778470 TTGAATTTAGGAAAAATGTGCGTTT 57.222 28.000 0.00 0.00 0.00 3.60
91 92 7.778470 TTTGAATTTAGGAAAAATGTGCGTT 57.222 28.000 0.00 0.00 0.00 4.84
92 93 7.961325 ATTTGAATTTAGGAAAAATGTGCGT 57.039 28.000 0.00 0.00 0.00 5.24
108 109 9.594478 AGAGTTTTTCGGTGTTTTATTTGAATT 57.406 25.926 0.00 0.00 0.00 2.17
109 110 9.030301 CAGAGTTTTTCGGTGTTTTATTTGAAT 57.970 29.630 0.00 0.00 0.00 2.57
110 111 8.244802 TCAGAGTTTTTCGGTGTTTTATTTGAA 58.755 29.630 0.00 0.00 0.00 2.69
111 112 7.763356 TCAGAGTTTTTCGGTGTTTTATTTGA 58.237 30.769 0.00 0.00 0.00 2.69
112 113 7.979115 TCAGAGTTTTTCGGTGTTTTATTTG 57.021 32.000 0.00 0.00 0.00 2.32
113 114 8.989653 TTTCAGAGTTTTTCGGTGTTTTATTT 57.010 26.923 0.00 0.00 0.00 1.40
117 118 8.989653 TTTATTTCAGAGTTTTTCGGTGTTTT 57.010 26.923 0.00 0.00 0.00 2.43
118 119 8.989653 TTTTATTTCAGAGTTTTTCGGTGTTT 57.010 26.923 0.00 0.00 0.00 2.83
119 120 9.244799 GATTTTATTTCAGAGTTTTTCGGTGTT 57.755 29.630 0.00 0.00 0.00 3.32
120 121 8.630037 AGATTTTATTTCAGAGTTTTTCGGTGT 58.370 29.630 0.00 0.00 0.00 4.16
121 122 9.463443 AAGATTTTATTTCAGAGTTTTTCGGTG 57.537 29.630 0.00 0.00 0.00 4.94
183 184 9.104713 AGAGGAATAAAATGAGTTTCCCAAAAT 57.895 29.630 0.00 0.00 38.73 1.82
184 185 8.491045 AGAGGAATAAAATGAGTTTCCCAAAA 57.509 30.769 0.00 0.00 38.73 2.44
185 186 7.950124 AGAGAGGAATAAAATGAGTTTCCCAAA 59.050 33.333 0.00 0.00 38.73 3.28
186 187 7.470192 AGAGAGGAATAAAATGAGTTTCCCAA 58.530 34.615 0.00 0.00 38.73 4.12
187 188 7.032598 AGAGAGGAATAAAATGAGTTTCCCA 57.967 36.000 0.00 0.00 38.73 4.37
188 189 7.112779 TGAGAGAGGAATAAAATGAGTTTCCC 58.887 38.462 0.00 0.00 38.73 3.97
189 190 8.744568 ATGAGAGAGGAATAAAATGAGTTTCC 57.255 34.615 0.00 0.00 38.31 3.13
295 296 9.292195 AGAGAGTTGGGAATTTCGTTATTTTTA 57.708 29.630 0.00 0.00 0.00 1.52
296 297 8.082242 CAGAGAGTTGGGAATTTCGTTATTTTT 58.918 33.333 0.00 0.00 0.00 1.94
297 298 7.593825 CAGAGAGTTGGGAATTTCGTTATTTT 58.406 34.615 0.00 0.00 0.00 1.82
298 299 6.349363 GCAGAGAGTTGGGAATTTCGTTATTT 60.349 38.462 0.00 0.00 0.00 1.40
299 300 5.123979 GCAGAGAGTTGGGAATTTCGTTATT 59.876 40.000 0.00 0.00 0.00 1.40
300 301 4.636206 GCAGAGAGTTGGGAATTTCGTTAT 59.364 41.667 0.00 0.00 0.00 1.89
301 302 4.000988 GCAGAGAGTTGGGAATTTCGTTA 58.999 43.478 0.00 0.00 0.00 3.18
302 303 2.814336 GCAGAGAGTTGGGAATTTCGTT 59.186 45.455 0.00 0.00 0.00 3.85
303 304 2.427506 GCAGAGAGTTGGGAATTTCGT 58.572 47.619 0.00 0.00 0.00 3.85
304 305 1.394917 CGCAGAGAGTTGGGAATTTCG 59.605 52.381 0.00 0.00 33.22 3.46
305 306 2.160417 CACGCAGAGAGTTGGGAATTTC 59.840 50.000 0.00 0.00 35.25 2.17
306 307 2.154462 CACGCAGAGAGTTGGGAATTT 58.846 47.619 0.00 0.00 35.25 1.82
307 308 1.611673 CCACGCAGAGAGTTGGGAATT 60.612 52.381 0.00 0.00 35.25 2.17
308 309 0.036010 CCACGCAGAGAGTTGGGAAT 60.036 55.000 0.00 0.00 35.25 3.01
309 310 1.371183 CCACGCAGAGAGTTGGGAA 59.629 57.895 0.00 0.00 35.25 3.97
310 311 2.583441 CCCACGCAGAGAGTTGGGA 61.583 63.158 0.00 0.00 38.82 4.37
311 312 2.046892 CCCACGCAGAGAGTTGGG 60.047 66.667 0.00 0.00 37.08 4.12
312 313 1.374758 GACCCACGCAGAGAGTTGG 60.375 63.158 0.00 0.00 0.00 3.77
313 314 1.374758 GGACCCACGCAGAGAGTTG 60.375 63.158 0.00 0.00 0.00 3.16
314 315 1.122019 AAGGACCCACGCAGAGAGTT 61.122 55.000 0.00 0.00 0.00 3.01
315 316 1.534235 AAGGACCCACGCAGAGAGT 60.534 57.895 0.00 0.00 0.00 3.24
316 317 1.079543 CAAGGACCCACGCAGAGAG 60.080 63.158 0.00 0.00 0.00 3.20
317 318 1.533033 TCAAGGACCCACGCAGAGA 60.533 57.895 0.00 0.00 0.00 3.10
318 319 1.079543 CTCAAGGACCCACGCAGAG 60.080 63.158 0.00 0.00 0.00 3.35
319 320 1.407656 AACTCAAGGACCCACGCAGA 61.408 55.000 0.00 0.00 0.00 4.26
320 321 1.071471 AACTCAAGGACCCACGCAG 59.929 57.895 0.00 0.00 0.00 5.18
321 322 1.227823 CAACTCAAGGACCCACGCA 60.228 57.895 0.00 0.00 0.00 5.24
322 323 2.617274 GCAACTCAAGGACCCACGC 61.617 63.158 0.00 0.00 0.00 5.34
323 324 2.317609 CGCAACTCAAGGACCCACG 61.318 63.158 0.00 0.00 0.00 4.94
324 325 0.034337 TACGCAACTCAAGGACCCAC 59.966 55.000 0.00 0.00 0.00 4.61
325 326 0.320374 CTACGCAACTCAAGGACCCA 59.680 55.000 0.00 0.00 0.00 4.51
326 327 0.606604 TCTACGCAACTCAAGGACCC 59.393 55.000 0.00 0.00 0.00 4.46
327 328 2.450609 TTCTACGCAACTCAAGGACC 57.549 50.000 0.00 0.00 0.00 4.46
328 329 4.691216 AGAAATTCTACGCAACTCAAGGAC 59.309 41.667 0.00 0.00 0.00 3.85
329 330 4.894784 AGAAATTCTACGCAACTCAAGGA 58.105 39.130 0.00 0.00 0.00 3.36
330 331 5.292101 CCTAGAAATTCTACGCAACTCAAGG 59.708 44.000 0.00 0.00 0.00 3.61
331 332 6.100004 TCCTAGAAATTCTACGCAACTCAAG 58.900 40.000 0.00 0.00 0.00 3.02
332 333 6.032956 TCCTAGAAATTCTACGCAACTCAA 57.967 37.500 0.00 0.00 0.00 3.02
333 334 5.654603 TCCTAGAAATTCTACGCAACTCA 57.345 39.130 0.00 0.00 0.00 3.41
334 335 6.273825 TGATCCTAGAAATTCTACGCAACTC 58.726 40.000 0.00 0.00 0.00 3.01
335 336 6.222038 TGATCCTAGAAATTCTACGCAACT 57.778 37.500 0.00 0.00 0.00 3.16
336 337 6.238130 GGTTGATCCTAGAAATTCTACGCAAC 60.238 42.308 16.04 16.04 0.00 4.17
337 338 5.815740 GGTTGATCCTAGAAATTCTACGCAA 59.184 40.000 0.00 0.00 0.00 4.85
338 339 5.105106 TGGTTGATCCTAGAAATTCTACGCA 60.105 40.000 0.00 0.00 37.07 5.24
339 340 5.357257 TGGTTGATCCTAGAAATTCTACGC 58.643 41.667 0.00 0.00 37.07 4.42
340 341 7.843490 TTTGGTTGATCCTAGAAATTCTACG 57.157 36.000 0.00 0.00 37.07 3.51
342 343 8.686334 GCATTTTGGTTGATCCTAGAAATTCTA 58.314 33.333 2.44 2.44 37.07 2.10
343 344 7.178983 TGCATTTTGGTTGATCCTAGAAATTCT 59.821 33.333 0.00 0.00 37.07 2.40
344 345 7.322664 TGCATTTTGGTTGATCCTAGAAATTC 58.677 34.615 0.00 0.00 37.07 2.17
345 346 7.243604 TGCATTTTGGTTGATCCTAGAAATT 57.756 32.000 0.00 0.00 37.07 1.82
346 347 6.855763 TGCATTTTGGTTGATCCTAGAAAT 57.144 33.333 0.00 0.00 37.07 2.17
347 348 6.662865 TTGCATTTTGGTTGATCCTAGAAA 57.337 33.333 0.00 0.00 37.07 2.52
348 349 6.662865 TTTGCATTTTGGTTGATCCTAGAA 57.337 33.333 0.00 0.00 37.07 2.10
349 350 6.662865 TTTTGCATTTTGGTTGATCCTAGA 57.337 33.333 0.00 0.00 37.07 2.43
350 351 9.434420 TTTATTTTGCATTTTGGTTGATCCTAG 57.566 29.630 0.00 0.00 37.07 3.02
351 352 9.784531 TTTTATTTTGCATTTTGGTTGATCCTA 57.215 25.926 0.00 0.00 37.07 2.94
352 353 8.688747 TTTTATTTTGCATTTTGGTTGATCCT 57.311 26.923 0.00 0.00 37.07 3.24
407 408 9.563748 ACATCTCAAATTTTCAATTTGGAATGT 57.436 25.926 21.80 21.80 38.35 2.71
420 421 9.696917 GGAACTTCATGTAACATCTCAAATTTT 57.303 29.630 0.00 0.00 0.00 1.82
421 422 8.023128 CGGAACTTCATGTAACATCTCAAATTT 58.977 33.333 0.00 0.00 0.00 1.82
422 423 7.530010 CGGAACTTCATGTAACATCTCAAATT 58.470 34.615 0.00 0.00 0.00 1.82
423 424 6.403636 GCGGAACTTCATGTAACATCTCAAAT 60.404 38.462 0.00 0.00 0.00 2.32
424 425 5.106712 GCGGAACTTCATGTAACATCTCAAA 60.107 40.000 0.00 0.00 0.00 2.69
425 426 4.391830 GCGGAACTTCATGTAACATCTCAA 59.608 41.667 0.00 0.00 0.00 3.02
426 427 3.932710 GCGGAACTTCATGTAACATCTCA 59.067 43.478 0.00 0.00 0.00 3.27
427 428 3.309954 GGCGGAACTTCATGTAACATCTC 59.690 47.826 0.00 0.00 0.00 2.75
428 429 3.055094 AGGCGGAACTTCATGTAACATCT 60.055 43.478 0.00 0.00 0.00 2.90
429 430 3.270877 AGGCGGAACTTCATGTAACATC 58.729 45.455 0.00 0.00 0.00 3.06
430 431 3.055094 AGAGGCGGAACTTCATGTAACAT 60.055 43.478 0.00 0.00 0.00 2.71
431 432 2.301870 AGAGGCGGAACTTCATGTAACA 59.698 45.455 0.00 0.00 0.00 2.41
432 433 2.973945 AGAGGCGGAACTTCATGTAAC 58.026 47.619 0.00 0.00 0.00 2.50
433 434 4.811969 TTAGAGGCGGAACTTCATGTAA 57.188 40.909 0.00 0.00 0.00 2.41
434 435 4.755411 CTTTAGAGGCGGAACTTCATGTA 58.245 43.478 0.00 0.00 0.00 2.29
435 436 3.600388 CTTTAGAGGCGGAACTTCATGT 58.400 45.455 0.00 0.00 0.00 3.21
436 437 2.352960 GCTTTAGAGGCGGAACTTCATG 59.647 50.000 0.00 0.00 0.00 3.07
437 438 2.027192 TGCTTTAGAGGCGGAACTTCAT 60.027 45.455 0.00 0.00 0.00 2.57
438 439 1.346395 TGCTTTAGAGGCGGAACTTCA 59.654 47.619 0.00 0.00 0.00 3.02
439 440 2.094762 TGCTTTAGAGGCGGAACTTC 57.905 50.000 0.00 0.00 0.00 3.01
440 441 2.027192 TGATGCTTTAGAGGCGGAACTT 60.027 45.455 0.00 0.00 0.00 2.66
441 442 1.555075 TGATGCTTTAGAGGCGGAACT 59.445 47.619 0.00 0.00 0.00 3.01
442 443 2.024176 TGATGCTTTAGAGGCGGAAC 57.976 50.000 0.00 0.00 0.00 3.62
443 444 2.945008 CAATGATGCTTTAGAGGCGGAA 59.055 45.455 0.00 0.00 0.00 4.30
444 445 2.564771 CAATGATGCTTTAGAGGCGGA 58.435 47.619 0.00 0.00 0.00 5.54
457 458 7.277539 ACCGGTGTTTATTTAATTGCAATGATG 59.722 33.333 13.82 0.00 0.00 3.07
458 459 7.327214 ACCGGTGTTTATTTAATTGCAATGAT 58.673 30.769 13.82 10.15 0.00 2.45
459 460 6.692486 ACCGGTGTTTATTTAATTGCAATGA 58.308 32.000 13.82 1.45 0.00 2.57
460 461 6.959671 ACCGGTGTTTATTTAATTGCAATG 57.040 33.333 13.82 0.00 0.00 2.82
461 462 7.223777 GCATACCGGTGTTTATTTAATTGCAAT 59.776 33.333 19.93 5.99 0.00 3.56
462 463 6.531948 GCATACCGGTGTTTATTTAATTGCAA 59.468 34.615 19.93 0.00 0.00 4.08
463 464 6.037098 GCATACCGGTGTTTATTTAATTGCA 58.963 36.000 19.93 0.00 0.00 4.08
464 465 6.037098 TGCATACCGGTGTTTATTTAATTGC 58.963 36.000 19.93 6.69 0.00 3.56
465 466 6.198216 GCTGCATACCGGTGTTTATTTAATTG 59.802 38.462 19.93 0.00 0.00 2.32
466 467 6.127591 TGCTGCATACCGGTGTTTATTTAATT 60.128 34.615 19.93 0.00 0.00 1.40
467 468 5.358442 TGCTGCATACCGGTGTTTATTTAAT 59.642 36.000 19.93 0.00 0.00 1.40
468 469 4.700692 TGCTGCATACCGGTGTTTATTTAA 59.299 37.500 19.93 0.00 0.00 1.52
469 470 4.262617 TGCTGCATACCGGTGTTTATTTA 58.737 39.130 19.93 0.00 0.00 1.40
470 471 3.085533 TGCTGCATACCGGTGTTTATTT 58.914 40.909 19.93 0.00 0.00 1.40
471 472 2.717390 TGCTGCATACCGGTGTTTATT 58.283 42.857 19.93 0.00 0.00 1.40
472 473 2.411628 TGCTGCATACCGGTGTTTAT 57.588 45.000 19.93 0.00 0.00 1.40
473 474 2.186532 TTGCTGCATACCGGTGTTTA 57.813 45.000 19.93 0.00 0.00 2.01
474 475 1.269448 CTTTGCTGCATACCGGTGTTT 59.731 47.619 19.93 0.00 0.00 2.83
475 476 0.881118 CTTTGCTGCATACCGGTGTT 59.119 50.000 19.93 0.69 0.00 3.32
476 477 0.036164 TCTTTGCTGCATACCGGTGT 59.964 50.000 19.93 8.05 0.00 4.16
477 478 1.331756 GATCTTTGCTGCATACCGGTG 59.668 52.381 19.93 1.57 0.00 4.94
478 479 1.065491 TGATCTTTGCTGCATACCGGT 60.065 47.619 13.98 13.98 0.00 5.28
479 480 1.667236 TGATCTTTGCTGCATACCGG 58.333 50.000 1.84 0.00 0.00 5.28
480 481 4.060900 AGTATGATCTTTGCTGCATACCG 58.939 43.478 1.84 0.00 42.36 4.02
481 482 4.453819 GGAGTATGATCTTTGCTGCATACC 59.546 45.833 1.84 0.00 42.36 2.73
482 483 4.453819 GGGAGTATGATCTTTGCTGCATAC 59.546 45.833 1.84 0.91 41.94 2.39
483 484 4.102996 TGGGAGTATGATCTTTGCTGCATA 59.897 41.667 1.84 0.00 0.00 3.14
484 485 3.117776 TGGGAGTATGATCTTTGCTGCAT 60.118 43.478 1.84 0.00 0.00 3.96
485 486 2.239402 TGGGAGTATGATCTTTGCTGCA 59.761 45.455 0.00 0.00 0.00 4.41
486 487 2.923121 TGGGAGTATGATCTTTGCTGC 58.077 47.619 0.00 0.00 0.00 5.25
487 488 4.514441 GTGATGGGAGTATGATCTTTGCTG 59.486 45.833 0.00 0.00 0.00 4.41
488 489 4.712476 GTGATGGGAGTATGATCTTTGCT 58.288 43.478 0.00 0.00 0.00 3.91
489 490 3.496130 CGTGATGGGAGTATGATCTTTGC 59.504 47.826 0.00 0.00 0.00 3.68
490 491 4.697514 ACGTGATGGGAGTATGATCTTTG 58.302 43.478 0.00 0.00 0.00 2.77
491 492 4.651503 AGACGTGATGGGAGTATGATCTTT 59.348 41.667 0.00 0.00 0.00 2.52
492 493 4.219115 AGACGTGATGGGAGTATGATCTT 58.781 43.478 0.00 0.00 0.00 2.40
493 494 3.838565 AGACGTGATGGGAGTATGATCT 58.161 45.455 0.00 0.00 0.00 2.75
494 495 4.279671 AGAAGACGTGATGGGAGTATGATC 59.720 45.833 0.00 0.00 0.00 2.92
495 496 4.038522 CAGAAGACGTGATGGGAGTATGAT 59.961 45.833 0.00 0.00 0.00 2.45
496 497 3.381590 CAGAAGACGTGATGGGAGTATGA 59.618 47.826 0.00 0.00 0.00 2.15
497 498 3.381590 TCAGAAGACGTGATGGGAGTATG 59.618 47.826 0.00 0.00 0.00 2.39
498 499 3.632333 TCAGAAGACGTGATGGGAGTAT 58.368 45.455 0.00 0.00 0.00 2.12
499 500 3.017442 CTCAGAAGACGTGATGGGAGTA 58.983 50.000 0.00 0.00 0.00 2.59
500 501 1.821753 CTCAGAAGACGTGATGGGAGT 59.178 52.381 0.00 0.00 0.00 3.85
501 502 2.095461 TCTCAGAAGACGTGATGGGAG 58.905 52.381 0.00 0.00 0.00 4.30
502 503 2.215942 TCTCAGAAGACGTGATGGGA 57.784 50.000 0.00 0.00 0.00 4.37
503 504 3.533606 ATTCTCAGAAGACGTGATGGG 57.466 47.619 0.00 0.00 0.00 4.00
504 505 6.642950 GGTATAATTCTCAGAAGACGTGATGG 59.357 42.308 0.00 0.00 0.00 3.51
505 506 7.203218 TGGTATAATTCTCAGAAGACGTGATG 58.797 38.462 0.00 0.00 0.00 3.07
506 507 7.348080 TGGTATAATTCTCAGAAGACGTGAT 57.652 36.000 0.00 0.00 0.00 3.06
507 508 6.680625 GCTGGTATAATTCTCAGAAGACGTGA 60.681 42.308 0.00 0.00 0.00 4.35
508 509 5.460419 GCTGGTATAATTCTCAGAAGACGTG 59.540 44.000 0.00 0.00 0.00 4.49
509 510 5.452077 GGCTGGTATAATTCTCAGAAGACGT 60.452 44.000 0.00 0.00 0.00 4.34
510 511 4.985409 GGCTGGTATAATTCTCAGAAGACG 59.015 45.833 0.00 0.00 0.00 4.18
511 512 4.985409 CGGCTGGTATAATTCTCAGAAGAC 59.015 45.833 0.00 0.00 0.00 3.01
512 513 4.501571 GCGGCTGGTATAATTCTCAGAAGA 60.502 45.833 0.00 0.00 0.00 2.87
513 514 3.743396 GCGGCTGGTATAATTCTCAGAAG 59.257 47.826 0.00 0.00 0.00 2.85
514 515 3.494398 GGCGGCTGGTATAATTCTCAGAA 60.494 47.826 0.00 0.00 0.00 3.02
515 516 2.037251 GGCGGCTGGTATAATTCTCAGA 59.963 50.000 0.00 0.00 0.00 3.27
516 517 2.417719 GGCGGCTGGTATAATTCTCAG 58.582 52.381 0.00 0.00 0.00 3.35
517 518 1.270094 CGGCGGCTGGTATAATTCTCA 60.270 52.381 7.61 0.00 0.00 3.27
518 519 1.270147 ACGGCGGCTGGTATAATTCTC 60.270 52.381 13.24 0.00 0.00 2.87
519 520 0.756903 ACGGCGGCTGGTATAATTCT 59.243 50.000 13.24 0.00 0.00 2.40
520 521 1.263217 CAACGGCGGCTGGTATAATTC 59.737 52.381 13.24 0.00 0.00 2.17
521 522 1.134340 TCAACGGCGGCTGGTATAATT 60.134 47.619 13.24 0.00 0.00 1.40
522 523 0.466543 TCAACGGCGGCTGGTATAAT 59.533 50.000 13.24 0.00 0.00 1.28
523 524 0.249676 TTCAACGGCGGCTGGTATAA 59.750 50.000 13.24 1.65 0.00 0.98
524 525 0.460635 GTTCAACGGCGGCTGGTATA 60.461 55.000 13.24 0.00 0.00 1.47
525 526 1.743995 GTTCAACGGCGGCTGGTAT 60.744 57.895 13.24 0.00 0.00 2.73
526 527 2.357760 GTTCAACGGCGGCTGGTA 60.358 61.111 13.24 0.00 0.00 3.25
529 530 3.039202 GATGGTTCAACGGCGGCTG 62.039 63.158 13.24 7.39 0.00 4.85
530 531 2.746277 GATGGTTCAACGGCGGCT 60.746 61.111 13.24 0.00 0.00 5.52
531 532 3.039202 CTGATGGTTCAACGGCGGC 62.039 63.158 13.24 0.00 0.00 6.53
532 533 1.375396 TCTGATGGTTCAACGGCGG 60.375 57.895 13.24 0.00 0.00 6.13
533 534 0.948623 TGTCTGATGGTTCAACGGCG 60.949 55.000 4.80 4.80 0.00 6.46
534 535 1.131126 CATGTCTGATGGTTCAACGGC 59.869 52.381 0.00 0.00 0.00 5.68
535 536 1.739466 CCATGTCTGATGGTTCAACGG 59.261 52.381 0.00 0.00 34.56 4.44
536 537 2.698803 TCCATGTCTGATGGTTCAACG 58.301 47.619 0.00 0.00 40.06 4.10
537 538 5.221224 TGTTTTCCATGTCTGATGGTTCAAC 60.221 40.000 0.00 0.00 40.06 3.18
538 539 4.892345 TGTTTTCCATGTCTGATGGTTCAA 59.108 37.500 0.00 0.00 40.06 2.69
539 540 4.278170 GTGTTTTCCATGTCTGATGGTTCA 59.722 41.667 0.00 0.00 40.06 3.18
540 541 4.321230 GGTGTTTTCCATGTCTGATGGTTC 60.321 45.833 0.00 0.00 40.06 3.62
541 542 3.573967 GGTGTTTTCCATGTCTGATGGTT 59.426 43.478 0.00 0.00 40.06 3.67
542 543 3.157087 GGTGTTTTCCATGTCTGATGGT 58.843 45.455 0.00 0.00 40.06 3.55
543 544 2.493278 GGGTGTTTTCCATGTCTGATGG 59.507 50.000 0.00 0.00 40.48 3.51
544 545 2.493278 GGGGTGTTTTCCATGTCTGATG 59.507 50.000 0.00 0.00 0.00 3.07
545 546 2.109834 TGGGGTGTTTTCCATGTCTGAT 59.890 45.455 0.00 0.00 0.00 2.90
546 547 1.496857 TGGGGTGTTTTCCATGTCTGA 59.503 47.619 0.00 0.00 0.00 3.27
547 548 1.993956 TGGGGTGTTTTCCATGTCTG 58.006 50.000 0.00 0.00 0.00 3.51
548 549 2.109834 TGATGGGGTGTTTTCCATGTCT 59.890 45.455 0.00 0.00 43.20 3.41
549 550 2.524306 TGATGGGGTGTTTTCCATGTC 58.476 47.619 0.00 0.00 43.20 3.06
550 551 2.692709 TGATGGGGTGTTTTCCATGT 57.307 45.000 0.00 0.00 43.20 3.21
551 552 4.317488 CTTTTGATGGGGTGTTTTCCATG 58.683 43.478 0.00 0.00 43.20 3.66
552 553 3.327464 CCTTTTGATGGGGTGTTTTCCAT 59.673 43.478 0.00 0.00 45.57 3.41
553 554 2.703007 CCTTTTGATGGGGTGTTTTCCA 59.297 45.455 0.00 0.00 37.46 3.53
554 555 2.703536 ACCTTTTGATGGGGTGTTTTCC 59.296 45.455 0.00 0.00 31.48 3.13
555 556 4.415881 AACCTTTTGATGGGGTGTTTTC 57.584 40.909 0.00 0.00 33.20 2.29
556 557 4.966168 ACTAACCTTTTGATGGGGTGTTTT 59.034 37.500 0.00 0.00 33.20 2.43
557 558 4.343814 CACTAACCTTTTGATGGGGTGTTT 59.656 41.667 0.00 0.00 33.20 2.83
558 559 3.895041 CACTAACCTTTTGATGGGGTGTT 59.105 43.478 0.00 0.00 33.20 3.32
559 560 3.496331 CACTAACCTTTTGATGGGGTGT 58.504 45.455 0.00 0.00 33.20 4.16
560 561 2.825532 CCACTAACCTTTTGATGGGGTG 59.174 50.000 0.00 0.00 33.20 4.61
561 562 2.821625 GCCACTAACCTTTTGATGGGGT 60.822 50.000 0.00 0.00 34.47 4.95
562 563 1.824852 GCCACTAACCTTTTGATGGGG 59.175 52.381 0.00 0.00 0.00 4.96
563 564 2.231235 GTGCCACTAACCTTTTGATGGG 59.769 50.000 0.00 0.00 0.00 4.00
564 565 2.890311 TGTGCCACTAACCTTTTGATGG 59.110 45.455 0.00 0.00 0.00 3.51
565 566 4.380867 GGATGTGCCACTAACCTTTTGATG 60.381 45.833 0.00 0.00 36.34 3.07
566 567 3.763897 GGATGTGCCACTAACCTTTTGAT 59.236 43.478 0.00 0.00 36.34 2.57
567 568 3.153919 GGATGTGCCACTAACCTTTTGA 58.846 45.455 0.00 0.00 36.34 2.69
568 569 2.890311 TGGATGTGCCACTAACCTTTTG 59.110 45.455 0.00 0.00 43.33 2.44
569 570 3.237268 TGGATGTGCCACTAACCTTTT 57.763 42.857 0.00 0.00 43.33 2.27
570 571 2.969821 TGGATGTGCCACTAACCTTT 57.030 45.000 0.00 0.00 43.33 3.11
580 581 5.643379 TTTTCTTGAACTATGGATGTGCC 57.357 39.130 0.00 0.00 37.10 5.01
586 587 6.518200 GCCACCAAATTTTCTTGAACTATGGA 60.518 38.462 0.00 0.00 0.00 3.41
720 768 7.436430 TGATTTTTACGTATGTGCCTACAAA 57.564 32.000 0.00 0.00 40.84 2.83
741 789 8.192774 ACACGAGCATATGAAAAATCATTTGAT 58.807 29.630 6.97 6.59 33.05 2.57
742 790 7.485595 CACACGAGCATATGAAAAATCATTTGA 59.514 33.333 6.97 0.00 33.05 2.69
743 791 7.253850 CCACACGAGCATATGAAAAATCATTTG 60.254 37.037 6.97 1.33 33.95 2.32
746 794 5.589855 TCCACACGAGCATATGAAAAATCAT 59.410 36.000 6.97 0.00 0.00 2.45
747 795 4.940654 TCCACACGAGCATATGAAAAATCA 59.059 37.500 6.97 0.00 0.00 2.57
748 796 5.484173 TCCACACGAGCATATGAAAAATC 57.516 39.130 6.97 0.00 0.00 2.17
749 797 5.895636 TTCCACACGAGCATATGAAAAAT 57.104 34.783 6.97 0.00 0.00 1.82
750 798 5.457140 GTTTCCACACGAGCATATGAAAAA 58.543 37.500 6.97 0.00 0.00 1.94
757 805 0.319083 ACGGTTTCCACACGAGCATA 59.681 50.000 0.00 0.00 0.00 3.14
836 885 4.526650 GGAGCTTGGTATTTTGAAGGGAAA 59.473 41.667 0.00 0.00 0.00 3.13
837 886 4.086457 GGAGCTTGGTATTTTGAAGGGAA 58.914 43.478 0.00 0.00 0.00 3.97
838 887 3.333680 AGGAGCTTGGTATTTTGAAGGGA 59.666 43.478 0.00 0.00 0.00 4.20
839 888 3.445096 CAGGAGCTTGGTATTTTGAAGGG 59.555 47.826 0.00 0.00 0.00 3.95
840 889 3.445096 CCAGGAGCTTGGTATTTTGAAGG 59.555 47.826 0.00 0.00 33.38 3.46
841 890 4.335416 TCCAGGAGCTTGGTATTTTGAAG 58.665 43.478 4.36 0.00 39.35 3.02
842 891 4.335416 CTCCAGGAGCTTGGTATTTTGAA 58.665 43.478 2.60 0.00 39.35 2.69
843 892 3.955471 CTCCAGGAGCTTGGTATTTTGA 58.045 45.455 2.60 0.00 39.35 2.69
876 925 0.752658 GTAAATGCCAATGGAGCCCC 59.247 55.000 2.05 0.00 0.00 5.80
881 930 1.999071 GCGCGGTAAATGCCAATGGA 61.999 55.000 8.83 0.00 0.00 3.41
983 1100 4.097361 GAAGGGGGTGTCGGGCTC 62.097 72.222 0.00 0.00 0.00 4.70
1236 1353 2.786495 GCCTCGCCTCCATCTCGAA 61.786 63.158 0.00 0.00 0.00 3.71
1444 1561 1.167851 ATGACGCCCACAATTGACAG 58.832 50.000 13.59 1.40 0.00 3.51
1445 1562 1.269174 CAATGACGCCCACAATTGACA 59.731 47.619 13.59 1.35 0.00 3.58
1508 1625 8.478775 AAAAGTAAAGATCTTTAAGCAACCCT 57.521 30.769 25.73 15.38 36.86 4.34
1510 1627 8.902735 CGAAAAAGTAAAGATCTTTAAGCAACC 58.097 33.333 25.73 14.25 36.86 3.77
1528 1645 1.165270 CTCCCGCAATCCGAAAAAGT 58.835 50.000 0.00 0.00 40.02 2.66
1536 1654 2.052104 CCAAACCCTCCCGCAATCC 61.052 63.158 0.00 0.00 0.00 3.01
1603 2873 3.187637 TGTTAACTGTTAAGCATGACCGC 59.812 43.478 12.97 0.02 0.00 5.68
1638 2908 8.743099 GCTGTACAAACAAGTAGTTCAAAAATC 58.257 33.333 0.00 0.00 40.26 2.17
1639 2909 7.704899 GGCTGTACAAACAAGTAGTTCAAAAAT 59.295 33.333 0.00 0.00 40.26 1.82
1670 2951 2.110835 TGAAGCTGGCGCACAAGA 59.889 55.556 10.83 0.00 39.10 3.02
1696 2977 4.827835 ACAGCTCAGTCAGACAGTTACTTA 59.172 41.667 2.66 0.00 0.00 2.24
1776 3057 8.706322 AATACAACACCAAGAAGTAATCCTTT 57.294 30.769 0.00 0.00 32.03 3.11
1784 3065 5.833131 ACATTGGAATACAACACCAAGAAGT 59.167 36.000 0.00 0.00 44.95 3.01
1789 3070 4.023622 CGACACATTGGAATACAACACCAA 60.024 41.667 0.00 0.00 45.64 3.67
1821 3102 0.916086 TTATCCCAGTGATGGCCGTT 59.084 50.000 0.00 0.00 34.76 4.44
2000 3284 5.879223 AGACTAACTGAATCAGCCATTGAAG 59.121 40.000 10.62 0.59 39.77 3.02
2109 3393 0.877071 CAGGCAATTCAACACTCGCT 59.123 50.000 0.00 0.00 0.00 4.93
2130 3414 1.802960 GTCACTGGCAGATTCACACTG 59.197 52.381 23.66 6.31 38.27 3.66
2153 3437 4.550076 AGAATCCTAGATAGCATGTGGC 57.450 45.455 0.00 0.00 45.30 5.01
2511 3800 9.754382 GAACCATAAACTGATACGGTTATAAGA 57.246 33.333 0.00 0.00 36.88 2.10
2847 4169 7.047891 AGTACTGTTTCAAATGAGAACACAGA 58.952 34.615 18.43 8.44 38.02 3.41
3014 4336 2.749621 GCCAGGTGACATAGAAACAAGG 59.250 50.000 0.00 0.00 0.00 3.61
3132 4455 1.102978 ACAACACAGTTCAGCAACCC 58.897 50.000 0.00 0.00 32.22 4.11
3174 4497 2.897969 TCTCCACACCTACTTTCTCACC 59.102 50.000 0.00 0.00 0.00 4.02
3272 4596 0.038343 GCCATTGTTTGCCATCACGT 60.038 50.000 0.00 0.00 0.00 4.49
3295 4619 0.314302 GTGCAGTCACTACGTGGACT 59.686 55.000 5.70 9.65 40.03 3.85
3369 4693 5.885465 AGAGGAGAAACATTGGAACAGAAT 58.115 37.500 0.00 0.00 42.39 2.40
3464 4788 7.691213 TGAGATAATTGGGTGTTTGGTTACTA 58.309 34.615 0.00 0.00 0.00 1.82
3670 5000 6.500684 TGGTTTCATACAAGAGCTCATTTC 57.499 37.500 17.77 0.00 0.00 2.17
3681 5011 7.067372 CCATCTTCTATTGCTGGTTTCATACAA 59.933 37.037 0.00 0.00 0.00 2.41
3794 5154 6.735678 CACTAGTGCAACCACACATATTTA 57.264 37.500 10.54 0.00 44.53 1.40
3832 5192 2.036604 TCGTGGCTTGTAGTGACAATCA 59.963 45.455 0.00 0.00 44.53 2.57
3851 5211 9.404348 GAGATATGGTATATGCTATGTCAATCG 57.596 37.037 14.08 0.00 0.00 3.34
3949 5310 5.584649 TGCATTTGAGTTATCCTCTAAACCG 59.415 40.000 0.00 0.00 41.11 4.44
4019 5382 6.549433 AATGGACATTTGGATGCAATTAGT 57.451 33.333 0.00 0.00 36.72 2.24
4270 5641 5.902681 TGTGATGGTCCTTAGATCTTTACG 58.097 41.667 0.00 0.00 0.00 3.18
4341 5712 5.792468 GTCGCAAAGAAACAATTCTCTCATC 59.208 40.000 0.00 0.00 45.19 2.92
4407 5778 8.755018 CAAGAAATAAAACTGAATGTGTCCAAC 58.245 33.333 0.00 0.00 0.00 3.77
4953 6324 1.179152 TGCAATCAGGATGCCACAAG 58.821 50.000 0.00 0.00 43.16 3.16
5010 6381 7.148171 GGTTCAGCTTTGCAGTAAGAGATAATT 60.148 37.037 2.23 0.00 0.00 1.40
5090 6462 6.698329 CACATCAACATTTCAACAGAACATGT 59.302 34.615 0.00 0.00 46.97 3.21
5096 6468 9.814899 AATTAAACACATCAACATTTCAACAGA 57.185 25.926 0.00 0.00 0.00 3.41
5097 6469 9.852481 CAATTAAACACATCAACATTTCAACAG 57.148 29.630 0.00 0.00 0.00 3.16
5098 6470 8.333908 GCAATTAAACACATCAACATTTCAACA 58.666 29.630 0.00 0.00 0.00 3.33
5099 6471 8.550376 AGCAATTAAACACATCAACATTTCAAC 58.450 29.630 0.00 0.00 0.00 3.18
5100 6472 8.659925 AGCAATTAAACACATCAACATTTCAA 57.340 26.923 0.00 0.00 0.00 2.69
5101 6473 9.755804 TTAGCAATTAAACACATCAACATTTCA 57.244 25.926 0.00 0.00 0.00 2.69
5105 6477 9.926158 TCAATTAGCAATTAAACACATCAACAT 57.074 25.926 0.00 0.00 0.00 2.71
5199 6571 2.874701 ACTGACAGTGCTTGCAACTAAG 59.125 45.455 7.47 0.00 0.00 2.18
5205 6577 2.355756 GAGAAAACTGACAGTGCTTGCA 59.644 45.455 9.33 0.00 0.00 4.08
5215 6587 3.463944 TCCCGTCAAAGAGAAAACTGAC 58.536 45.455 0.00 0.00 35.82 3.51
5267 6639 6.210287 TGCATGCATGAATCATCAAACTTA 57.790 33.333 30.64 0.00 39.49 2.24
5268 6640 5.079689 TGCATGCATGAATCATCAAACTT 57.920 34.783 30.64 0.00 39.49 2.66
5335 6707 6.196724 TGGCGTTTGTATTGACTTTTAAAACG 59.803 34.615 12.03 12.03 46.59 3.60
5343 6715 5.354234 CCTATTCTGGCGTTTGTATTGACTT 59.646 40.000 0.00 0.00 0.00 3.01
5349 6721 4.216411 ACACCTATTCTGGCGTTTGTAT 57.784 40.909 0.00 0.00 0.00 2.29
5447 6819 2.040145 TCCATCAACATGCTTCCTGACA 59.960 45.455 0.00 0.00 0.00 3.58
5467 6839 0.589729 CATTAGGCAACGTGCGCATC 60.590 55.000 15.91 6.64 46.21 3.91
5476 6848 3.727726 ACAAAAAGGCACATTAGGCAAC 58.272 40.909 0.00 0.00 36.37 4.17
5487 6859 5.486526 ACATGACTTCAAAACAAAAAGGCA 58.513 33.333 0.00 0.00 41.99 4.75
5504 6876 6.314018 TCGAGCATACATTTGAAAACATGAC 58.686 36.000 0.00 0.00 0.00 3.06
5508 6880 6.552859 TCTTCGAGCATACATTTGAAAACA 57.447 33.333 0.00 0.00 0.00 2.83
5642 7022 4.523943 GCCATGCATTTCCCAGTCAATATA 59.476 41.667 0.00 0.00 0.00 0.86
5651 7031 0.252148 TCTTGGCCATGCATTTCCCA 60.252 50.000 6.09 0.46 0.00 4.37
5762 7142 1.839424 TGATCTCCTCACGCTCTTCA 58.161 50.000 0.00 0.00 0.00 3.02
5861 7241 3.897657 ATACTAACGAGGATCCCCTGA 57.102 47.619 8.55 0.00 44.53 3.86
5882 7264 3.244911 ACTGGTGCCACTACAAGCTAAAT 60.245 43.478 0.00 0.00 0.00 1.40
5883 7265 2.105821 ACTGGTGCCACTACAAGCTAAA 59.894 45.455 0.00 0.00 0.00 1.85
5987 7369 1.301558 GAGGCTGGCGATGGATGAG 60.302 63.158 0.00 0.00 0.00 2.90
6060 7442 4.826274 AAGCATCTCCTAAAGCTACACA 57.174 40.909 0.00 0.00 36.07 3.72
6176 7559 4.676546 TCACAAAAATTGCACATCGAACA 58.323 34.783 0.00 0.00 0.00 3.18
6227 7610 6.867519 TTCTGTAGACCTTTGGTATCATCA 57.132 37.500 0.00 0.00 35.25 3.07
6229 7612 6.058183 GCATTCTGTAGACCTTTGGTATCAT 58.942 40.000 0.00 0.00 35.25 2.45
6234 7617 2.290960 GGGCATTCTGTAGACCTTTGGT 60.291 50.000 0.00 0.00 39.44 3.67
6256 7639 7.254727 GCTCAAAACAATGCCAACATTTTCTTA 60.255 33.333 0.00 0.00 44.21 2.10
6263 7646 3.132925 GTGCTCAAAACAATGCCAACAT 58.867 40.909 0.00 0.00 38.49 2.71
6321 7704 4.344865 AAGGCGGTGGCACGGATT 62.345 61.111 26.86 17.27 42.47 3.01
6322 7705 4.778143 GAAGGCGGTGGCACGGAT 62.778 66.667 26.86 12.60 42.47 4.18
6327 7710 2.347490 GAAGAGAAGGCGGTGGCA 59.653 61.111 0.00 0.00 42.47 4.92
6368 7751 0.543174 ACAGGTCCTCGCTCCTCTTT 60.543 55.000 0.00 0.00 30.91 2.52
6426 7809 1.808390 GCCACCTTAGTGTACGCCG 60.808 63.158 1.98 0.00 42.88 6.46
6436 7819 3.454573 ATCGTCGCCGCCACCTTA 61.455 61.111 0.00 0.00 0.00 2.69
6460 7843 6.072728 CGAGGTACAGAGAGATCTTATTGGAG 60.073 46.154 0.00 0.00 0.00 3.86
6463 7846 5.563867 GCCGAGGTACAGAGAGATCTTATTG 60.564 48.000 0.00 0.00 0.00 1.90
6490 7873 4.520111 CCTTCAATGACACCAGATCAAACA 59.480 41.667 0.00 0.00 0.00 2.83
6573 7960 8.030692 ACGTGCTATTTACATAGTGTTACTTGA 58.969 33.333 0.00 0.00 35.61 3.02
6603 7993 7.952671 TGGGTTGCAAGTATTTATTGTTTGTA 58.047 30.769 0.00 0.00 0.00 2.41
6641 8031 2.879103 ACCGTTGAGGGATTGACAAT 57.121 45.000 0.00 0.00 46.96 2.71
6738 8129 0.242555 ACCAAAAATACCTTGCCGCG 59.757 50.000 0.00 0.00 0.00 6.46
6784 8177 3.132289 TCTCTAGTGAAAACTATGGCCCG 59.868 47.826 0.00 0.00 0.00 6.13
6825 8219 7.393216 ACAGTAATTTGTTTACCCACCGTATA 58.607 34.615 0.00 0.00 41.01 1.47
6882 8276 6.978338 ACATGATCATTGCCTTGAATATCAC 58.022 36.000 5.16 0.00 0.00 3.06
6889 8283 6.825213 GGCTATATACATGATCATTGCCTTGA 59.175 38.462 5.16 0.00 36.67 3.02
6913 8307 5.293569 GGTCTACTAATTTTGGACGTGATGG 59.706 44.000 0.00 0.00 0.00 3.51
6926 8320 8.902540 TGCATAATCATTTCGGTCTACTAATT 57.097 30.769 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.